BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NZ_CP034943	= 3933414	341 (1.080)	4 (0.020) +GAGAGGGAGCCCCCTCTCTTTTTGTCT	4/198	NT	1.6%	coding (822/822 nt)	EO946_RS20235	SDR family oxidoreductase
*	?	NZ_CP034943	3934434 =	277 (0.880)	4 (0.020) +GAGAGGGAGCCCCCTCTCTTTTTGTCT	4/198	NT	1.6%	intergenic (+1020/+1)	EO946_RS20235/EO946_RS20245	SDR family oxidoreductase/TetR/AcrR family transcriptional regulator
Rejected: Frequency below/above cutoff threshold.

Only 100 of 328 total aligned reads displayed.

GTGACACAACGACACAGAACCCGGACTGAGTATCCGGGCAAATGTATATCCGTTGGAAACGTTACCTCTCTCAGGTTTTCTTTTCAAAACTGAAGTTACTCCCCAGCCTTCCATTTCAACCGCTGGCTGGTTTCTCTCGTTTATAGCAATACAACCTTATACTTCTTCACATCCAAAAACTGCAAAAACTCCCTCGCCAGCACTTCCGGCGCATGCGTCTTCCCTTCATCCAGCCGATACAAAATCAGCCCGATAATCATCGCGGATACATAGTAGGCA  >  NZ_CP034943/3934295‑3934573

 tGACACAACGACACAGAACCCGGACTGAGTATCCGGGCAAATGTATATCCGTTGGAAACGTTACCTCTCTCAGGTTTTCTTTTCAAAACTGAAGTTACTCCCCAGCCTTCCATTTCAACCGCTGGCTGGTTTCTCTCGtt                                                                                                                                            <  2:323480/140‑1 (MQ=255)

 tGACACAACGACACAGAACCCGGACTGAGTATCCGGGCAAATGTATATCCGTTGGAAACGTTACCTCTCTCAGGTTTTCTTTTCAAAACTGAAGTTACTCCCCAGCCTTCCATTTCAACCGCTGGCTGGTTTCTCTCGtt                                                                                                                                            <  2:2666760/140‑1 (MQ=255)

    cacaACGACACAGAACCCGGACTGTGTATCCGGGCAACTGTATATCCGTTGGAAACGTTACCTCTCTCAGGTTTTCTTTTCAAAACTGAAGTTACTCCCCAGCCTTCCATTTCAACCGCTGGCTGGTTTCTCTCGTTtat                                                                                                                                         <  2:4953311/140‑1 (MQ=255)

    cacaACGACACAGAACCCGGACTGAGTATCCGGGCAAATGTATATCCGTTGGAAACGTTACCTCTCTCAGGTTTTCTTTTCAAAACTGAAGTTACTCCCCAGCCTTCCATTTCAACCGCTGGCTGGTTTCTCTCGTTtat                                                                                                                                         <  2:4766565/140‑1 (MQ=255)

    cacaACGACACAGAACCCGGACTGAGTATCCGGGCAAATGTATATCCGTTGGAAACGTTACCTCTCTCAGGTTTTCTTTTCAAAACTGAAGTTACTCCCCAGCCTTCCATTTCAACCGCTGGCTGGTTTCTCTCGTTtat                                                                                                                                         <  2:1297918/140‑1 (MQ=255)

    cacaACGACACAGAACCCGGACTGAGTATCCGGGCAAATGTATATCCGTTGGAAACGTTACCTCTCTCAGGTTTTCTTTTCAAAACTGAAGTTACTCCCCAGCCTTCCATTTCAACCGCTGGCTGGTTTCTCTCGTTtat                                                                                                                                         <  2:1769882/140‑1 (MQ=255)

    cacaACGACACAGAACCCGGACTGAGTATCCGGGCAAATGTATATCCGTTGGAAACGTTACCTCTCTCAGGTTTTCTTTTCAAAACTGAAGTTACTCCCCAGCCTTCCATTTCAACCGCTGGCTGGTTTCTCTCGTTtat                                                                                                                                         <  2:1894984/140‑1 (MQ=255)

    cacaACGACACAGAACCCGGACTGAGTATCCGGGCAAATGTATATCCGTTGGAAACGTTACCTCTCTCAGGTTTTCTTTTCAAAACTGAAGTTACTCCCCAGCCTTCCATTTCAACCGCTGGCTGGTTTCTCTCGTTtat                                                                                                                                         <  2:240449/140‑1 (MQ=255)

    cacaACGACACAGAACCCGGACTGAGTATCCGGGCAAATGTATATCCGTTGGAAACGTTACCTCTCTCAGGTTTTCTTTTCAAAACTGAAGTTACTCCCCAGCCTTCCATTTCAACCGCTGGCTGGTTTCTCTCGTTtat                                                                                                                                         <  2:2728207/140‑1 (MQ=255)

    cacaACGACACAGAACCCGGACTGAGTATCCGGGCAAATGTATATCCGTTGGAAACGTTACCTCTCTCAGGTTTTCTTTTCAAAACTGAAGTTACTCCCCAGCCTTCCATTTCAACCGCTGGCTGGTTTCTCTCGTTtat                                                                                                                                         <  2:423543/140‑1 (MQ=255)

    cacaACGACACAGAACCCGGACTGAGTATCCGGGCAAATGTATATCCGTTGGAAACGTTACCTCTCTCAGGTTTTCTTTTCAAAACTGAAGTTACTCCCCAGCCTTCCATTTCAACCGCTGGCTGGTTTCTCTCGTTtat                                                                                                                                         <  2:4412498/140‑1 (MQ=255)

    cacaACGACACAGAACCCGGACTGAGTATCCGGGCAAATGTATATCCGTTGGAAACGTTACCTCTCTCAGGTTTTCTTGTCAAAACTGAAGTTACTCCCCAGCCTTCCATTTCAACCGCTGGCTGGTTTCTCTCGTTtat                                                                                                                                         <  2:210279/140‑1 (MQ=255)

    cacaACGACACAGAACCAGGACTGAGTATCCGGGGAAATGTATATCCGTTGGAAACGTTACCTCTCTCAGCTTTTCTTTTCAAAACTGAAGTTACTCCCCAGCATTCCATTTCAACCGCTGGCTTGTTTCTCTCGTTgat                                                                                                                                         <  1:4360492/140‑1 (MQ=255)

     acaACGACACAGAACCCGGACTGAGTATCCGGGCAACTGTATATCCGTTGGAAACGTTACCTCTCTCAGGTTTTCTTTTCAAAACTGAAGTTACTCCCCAGCCTTCCATTTCAACCGCTGGCTGGTTTCTCTCGTTtata                                                                                                                                        <  1:3136176/140‑1 (MQ=255)

     acaACGACACAGAACCCGGACTGAGTATCCGGGCAAATGTATATCCGTTGGAAACGTTACCTCTCTCAGGTTTTCTTTTCAAAACTGAAGTTACTCCCCAGCCTTCCATTTCAACCGCTGGCTGGTTTCTCTCGTTtata                                                                                                                                        <  2:560118/140‑1 (MQ=255)

     acaACGACACAGAACCCGGACTGAGTATCCGGGCAAATGTATATCCGTTGGAAACGTTACCTCTCTCAGGTTTTCTTTTCAAAACTGAAGTTACTCCCCAGCCTTCCATTTCAACCGCTGGCTGGTTTCTCTCGTTtata                                                                                                                                        >  1:4700933/1‑140 (MQ=255)

     acaACGACACAGAACCCGGACTGAGTATCCGGGCAAATGTATATCCGTTGGAAACGTTACCTCTCTCAGGTTTTCTTTTCAAAACTGAAGTTACTCCCCAGCCTTCCATTTCAACCGCTGGCTGGTTTCTCTCGTTtata                                                                                                                                        <  2:68546/140‑1 (MQ=255)

         cGACACAGAACCCGGACTGAGTATCCGGGCAAATGTATATCCGTTGGAAACGTTACCTCTCTCAGGTTTTCTTTTCAAAACTGAAGTTACTCCCCAGCCTTCCATTTCAACCGCTGGCTGGTTTCTCTCGTTTATAGCaa                                                                                                                                    <  1:1951272/140‑1 (MQ=255)

          gACACAGAACCCGGACTGAGTATCCGGGCAAATGTATATCCGTTGGAAACGTTACCTCTCTCAGGTTTTCTTTTCAAAACTGAAGTTACTCCCCAGCCTTCCATTTCAACCGCTGGCTGGTTTCTCTCGTTTATAGCact                                                                                                                                   >  2:2881336/1‑138 (MQ=255)

           acacAGAACCCGGACTGAGTATCCGGGCAAATGTATATCCGTTGGAAACGTTACCTCTCTCAGGTTTTCTTTTCAAAACTGAAGTTACTCCCCAGCCTTCCATTTCAACCGCTGGCTGGTTTCTCTCGTTTATAGCAATa                                                                                                                                  <  1:2894300/140‑1 (MQ=255)

           acacAGAACCCGGACTGAGTATCCGGGCAAATGTATATCCGTTGGAAACGTTACCTCTCTCAGGTTTTCTTTTCAAAACTGAAGTTACTCCCCAGCCTTCCATTTCAACCGCTGGCTGGTTTCTCTCGTTTATAGCAATa                                                                                                                                  >  1:1778237/1‑140 (MQ=255)

           acacAGAACCCGGACTGAGTATCCGGGCAAATGTATATCCGTTGGAAACGTTACCTCTCTCAGGTTTTCTTTTCAAAACTGAAGTTACTCCCCAGCCTTCCATTTCAACCGCTGGCTGGTTTCTCTCGTTTATAGCAATa                                                                                                                                  <  1:3900072/140‑1 (MQ=255)

           acacAGAACCCGGACTGAGTATCCGGGCAAATGTATATCCGTTGGAAACGTTACCTCTCTCAGGTTTTCTTTTCAAAACTGAAGTTACTCCCCAGCCTTCCATTTCAACCGCTGGCTGGTTTCTCTCGTTTATAGCAATa                                                                                                                                  <  1:4617825/140‑1 (MQ=255)

           acacAGAACCCGGACTGAGTATCCGGGCAAATGTATATCCGTTGGAAACGTTACCTCTCTCAGGTTTTCTTTTCAAAACTGAAGTTACTCCCCAGCCTTCCATTTCAACCGCTGGCTGGTTTCTCTCGTTTATAGCAATa                                                                                                                                  <  1:4230270/140‑1 (MQ=255)

               aGAACCCGGACTGAGTATCCGGGCAAATGTATATCCGTTGGAAACGTTACCTCTCTCAGGTTTTCTTTTCAAAACTGAAGTTACTCCCCAGCCTTCCATTTCAACCGCTGGCTGGTGTCTCTCGTTTATAGCAATACacc                                                                                                                              >  2:3347150/1‑138 (MQ=255)

                   cccGGACTGAGTATCCGGGCAAATGTATATCCGTTGGAAACGTTACCTCTCTCAGGTTTTCTTTTCAAAACTGAAGTTACTCCCCCGCCTTCCATTTCAACCGCTGGCTGGTTTCTCTCGTTTATAGCAATACAACCTta                                                                                                                          <  2:3136642/140‑1 (MQ=255)

                   cccGGACTGAGTATCCGGGCAAATGTATATCCGTTGGAAACGTTACCTCTCTCAGGTTTTCTTTTCAAAACTGAAGTTACTCCCCAGCCTTCCATTTCAACCGCTGGCTGGTTTCTCTCGTTTATAGCAATACAACCTta                                                                                                                          >  2:4035862/1‑140 (MQ=255)

                   cccGGACTGAGTATCCGGGCAAATGTATATCCGTTGGAAACGTTACCTCTCTCAGGTTTTCTTTTCAAAACTGAAGTTACTCCCCAGCCTTCCATTTCAACCGCTGGCTGGTTTCTCTCGTTTATAGCAATACAACCTta                                                                                                                          >  2:3808467/1‑140 (MQ=255)

                   cccGGACTGAGTATCCGGGCAAATGTATATCCGTTGGAAACGTTACCTCTCTCAGGTTTTCTTTTCAAAACTGAAGTTACTCCCCAGCCTTCCATTTCAACCGCTGGCTGGTTTCTCTCGTTTATAGCAATACAACCTta                                                                                                                          <  2:2345077/140‑1 (MQ=255)

                   cccGGACTGAGTATCCGGGCAAATGTATATCCGTTGGAAACGTTACCTCTCTCAGGTTTTCTTTTCAAAACTGAAGTTACTCCCCAGCCTTCCATTTCAACCGCTGGCTGGTTTCTCTCGTTTATAGCAATACAACCTta                                                                                                                          >  2:180304/1‑140 (MQ=255)

                   cccGGACTGAGTATCCGGGCAAATGTATATCCGTTGGAAACGTTACCTCTCTCAGGTTTTCTTTTCAAAACTGAAGTTACTCCCCAGCCTTCCATTTCAACCGCTGGCTGGTTTCTCTCGTTTATAGCAATACAACCTta                                                                                                                          <  2:1555543/140‑1 (MQ=255)

                   cccGGACTGAGTATCCGGGCAAATGTATATCCGTTGGAAACGTTACCTCTCTCAGGTTTTCTTTTCAAAACTGAAGTTACTCCCCAGCCTTCCATTTCAACCGCTGGCTGGTTTCTCTCGTTTATAGCAATACAACCTta                                                                                                                          <  2:1236066/140‑1 (MQ=255)

                   cccGGACTGAGTATACGGGCAAATGTATATCCGTTGGAAACGTTACCTCTCTCAGGTTTTCTTTTCAAAACTGAAGTTACTCCCCAGCCTTCCATTTCAACCGCTGGCTGGTTTCTCTCGTTTATAGCAATACAACCTta                                                                                                                          <  2:1328960/140‑1 (MQ=255)

                      ggACTGAGTATCCGGGCAAATGTATATCCGTTGGAAACGTTACCTCTCTCAGGTTTTCTTTTCAAAACTGAAGTTACTCCCCAGCCTTCCATTTCAACCGCTGGCTGGTTTCTCTCGTTTATAGCAATACAACCGTATAc                                                                                                                       >  1:72903/1‑140 (MQ=255)

                           gAGTCTCCGGGCAAATGTATATCCGTTGGAAACGGTACCTCTCTCAGGTTGTCTTTTCAAAACTGAAGTTACTCCCCAGCCTTCCATTTCCAGCGCTGGCTGGTTTCTCTCGGTTCTAGCTATAGAACATtttagtgctg                                                                                                                  >  2:2800795/1‑134 (MQ=255)

                           gAGTATCCGGGCAAATGTATATCCGTTGGAAACGTTACCTCTCTCAGGTTTTCTTTTCAAAACTGAAGTTACTCCCCAGCCTTCCATTTCAACCGCTGGCTGGTTTCTCTCGTTTATAGCAATACAACCTTATActtctt                                                                                                                  >  1:4166816/1‑140 (MQ=255)

                           gAGTATCCGGGCAAATGTATATCCGTTGGAAACGTTACCTCTCTCAGGTTTTCTTTTCAAAACTGAAGTTACTCCCCAGCCTTCCATTTCAACCGCTGGCTGGTTTCTCTCGTTTATAGCAATACAACCTTATActtctt                                                                                                                  >  2:5209938/1‑140 (MQ=255)

                           gAGTATCCGGGCAAATGTATATCCGTTGGAAACGTTACCTCTCTCAGGTTTTCTTTTCAAAACTGAAGTTACTCCCCAGCCTTCCATTTCAACCGCTGGCTGGTTTCTCTCGTTTATAGCAATACAACCTTATActtctt                                                                                                                  >  1:1864762/1‑140 (MQ=255)

                           gAGTATCCGGGCAAATGTATATCCGTTGGAAACGTTACCTCTCTCAGGTTTTCTTTTCAAAACTGAAGTTACTCCCCAGCCTTCCATTTCAACCGCTGGCTGGTTTCTCTCGTTTATAGCAATACAACCTTATActtctt                                                                                                                  <  2:4361927/140‑1 (MQ=255)

                           gAGTATCCGGGCAAATGTATATCCGATGGAAACGTTACCTCTCTCAGGTTTTCTTTTCAAAAATGAAGTTACTCCCCAGCCTTCCATTACAACAGCTGGCTGGTTTCTCTCGTTTATATAAATACAACCTTATAatactt                                                                                                                  >  1:2083874/1‑140 (MQ=255)

                             gTATCCGGGCAAATGTATATCCGTTGGAAACGTTACCTCTCTCAGGTTTTCTTTTCAAAACTGAAGTTACTCCCCAGCCTTCCATTTCAACCGCTGGCTGGTTTCTCTCGTTTATAGCAATACAACCTTATACTTCTTca                                                                                                                <  1:819752/140‑1 (MQ=255)

                                    ggCAAATGTATATCCGTTGGAAACGTTACCTCTCTCAGGTTTTCTTTTCAAAACTGAAGTTACTCCCCAGCCTTCCATTTCAACCGCTGGCTGGTTTCTCTCGTTTATAGCAATACAACCTTATACTTCTTCACATCCaa                                                                                                         >  2:1671229/1‑140 (MQ=255)

                                    ggCAAATGTATATCCGTTGGAAACGTTACCTCTCTCAGGTTTTCTTTTCAAAACTGAAGTTACTCCCCAGCCTTCCATTTCAACCGCTGGCTGGTTTCTCTCGTTTATAGCAATACAACCTTATACTTCTTCACATCCaa                                                                                                         >  2:120068/1‑140 (MQ=255)

                                      cAAATGTATATCCGTTGGAAACGTTACCTCTCTCAGGTTTTCTTTTCAAAACTTAAGTTACTCCCCAGCCTTCCATTTCAACCGCTGGCTGGTTTCTCTCGTTTATATCAATACAACCTTATAATTCTTCAGATaaaaaa                                                                                                       >  2:5013995/1‑140 (MQ=255)

                                      cAAATGTATATCCGTTGGAAACGTTACCTCTCTCAGGTTTTCTTTTCAAAACTGAAGTTACTCCCCAGCCTTCCATTTCAACCGCTGGCTGGTTTCTCTCGTTTATAGCAATa                                                                                                                                  >  1:3698022/1‑113 (MQ=255)

                                      cAAATGTATATCCGTTGGAAACGTTACCTCTCTCAGGTTTTCTTTTCAAAACTGAAGTTACTCCCCAGCCTTCCATTTCAACCGCTGGCTGGTTTCTCTCGTTTATAGCAATa                                                                                                                                  <  2:3924192/113‑1 (MQ=255)

                                      cAAATGTATATCCGTTGGAAACGTTACCTCTCTCAGGTTTTCTTTTCAAAACTGAAGTTACTCCCCAGCCTTCCATTTCAACCGCTGGCTGGTTTCTCTCGTTTATAGCAATa                                                                                                                                  >  1:3814550/1‑113 (MQ=255)

                                      cAAATGTATATCCGTTGGAAACGTTACCTCTCTCAGGTTTTCTTTTCAAAACTGAAGTTACTCCCCAGCCTTCCATTTCAACCGCTGGCTGGTTTCTCTCGTTTATAGCAATACAACCTTATACTTCTTCACATCCaaaa                                                                                                       <  2:1727816/140‑1 (MQ=255)

                                      cAAATGTATATCCGTTGGAAACGTTACCTCTCTCAGGTTTTCTTTTCAAAACTGAAGTTACTCCCCAGCCTTCCATTTCAACCGCTGGCTGGTTTCTCTCGTTTATAGCAATACAACCTTATACTTCTTCACATCCaaaa                                                                                                       >  2:2828607/1‑140 (MQ=255)

                                      cAAATGTATATCCGTTGGAAACGTTACCTCTCTCAGGTTTTCTTTTCAAAACTGAAGTTACTCCCCAGCCTTCCATTTCAACCGCTGGCTGGTTTCTCTCGTTTATAGCAATACAACCTTATACTTCTTCACATCCaaaa                                                                                                       >  1:2451835/1‑140 (MQ=255)

                                        aaTGTATATCCGTTGGAAACGTTACCTCTCTCAGGTTTTCTTTTCAAAACTGAAGTTACTCCCCAGCCTTCCATTTCAACCGCTGGCTGGTTTCTCTCGTTTATAGCAATa                                                                                                                                  <  1:419768/111‑1 (MQ=255)

                                        aaTGTATATCCGTTGGAAACGTTACCTCTCTCAGGTTTTCTTTTCAAAACTGAAGTTACTCCCCAGCCTTCCATTTCAACCGCTGGCTGGTTTCTCTCGTTTATAGCAATa                                                                                                                                  <  1:1533220/111‑1 (MQ=255)

                                        aaTGTATATCCGTTGGAAACGTTACCTCTCTCAGGTTTTCTTTTCAAAACTGAAGTTACTCCCCAGCCTTCCATTTCAACCGCTGGCTGGTTTCTCTCGTTTATAGCAATACAACCTTATACTTCTTCACATCCAAAAAc                                                                                                     >  2:584439/1‑140 (MQ=255)

                                        aaTGTATATCCGTTGGAAACGTTACCTCTCTCAGGTTTTCTTTTCAAAACTGAAGTTACTCCCCAGCCTTCCATTTCAACCGCTGGCTGGTTTCTCTCGTTTATAGCAATACAACCTTATACTTCTTCACATCCAAAAAc                                                                                                     >  2:472619/1‑140 (MQ=255)

                                              tatCCGTTGGAAACGTTACCTCTCTCAGGTTTTCGTTTCAAAAGTGAAGTTACTCCCCAGCCTTCCATTTCAACCGCTGGCTGGTTTCTCTCGTTTATAGCCATACACCCTTATACTTCTTCACAGCCAAAAACTGCaaa                                                                                               >  2:485461/1‑140 (MQ=255)

                                               atCCGTTGGAAACGTTACCTCTCTCAGGTTTTCTTTTCAAAACTGAAGTTACTCCCCAGCCTTCCATTTCAACCGCTGGCTGGTTTCTCTCGTTTATAGCAATACAACCTTATACTTCTTCACATCCAAAAACTGCaaaa                                                                                              >  2:2289893/1‑140 (MQ=255)

                                               atCCGTTGGAAACGTTACCTCTCTCAGGTTTTCTTTTCAAAACTGAAGTTACTCCCCAGCCTTCCATTTCAACCGCTGGCTGGTTTCTCTCGTTTATAGCAATACAACCTTATACTTCTTCACATCCAAAAACTGCaaaa                                                                                              >  2:3678992/1‑140 (MQ=255)

                                               atCCGTTGGAAACGTTACCTCTCTCAGGTTTTCTTTTCAAAACTGAAGTTACTCCCCAGCCTTCCATTTCAACCGCTGGCTGGTTTCTCTCGTTTATAGCAATACAACCTTATACTTCTTCACATCCAAAAACTGCaaaa                                                                                              >  2:4701200/1‑140 (MQ=255)

                                                   gTTGGAAACGTTACCTCTCTCAGGTTTTCTTTTCAAAACTGAAGTTACTCCCCAGCCTTCCATTTCAACCGCTGGCTGGTTTCTCTCGTTTTTAGCAATAGAGGCTTATACTTCTTCACATCCAAAATCTGCAAAAACTc                                                                                          >  1:114429/1‑140 (MQ=255)

                                                   gTTGGAAACGTTACCTCTCTCAGGTTTTCTTTTCAAAACTGAAGTTACTCCCCAGCCTTCCATTTCAACCGCTGGCTGGTTTCTCTCGTTTATAGCAATa                                                                                                                                  >  1:553416/1‑100 (MQ=255)

                                                   gTTGGAAACGTTACCTCTCTCAGGTTTTCTTTTCAAAACTGAAGTTACTCCCCAGCCTTCCATTTCAACCGCTGGCTGGTTTCTCTCGTTTATAGCAATACAACCTTATACTTCTTCACATCCAAAAACTGCAAAAACTc                                                                                          >  1:3226570/1‑140 (MQ=255)

                                                   gTTGGAAACGTTACCTCTCTCAGGTTTTCTTTTCAAAACTGAAGTTACTCCCCAGCCTTCCATTTCAACCGCTGGCTGGTTTCTCTCGTTTATAGCAATACAACCTTATACTTCTTCACATCCAAAAACTGCAAAAACTc                                                                                          >  1:1001311/1‑140 (MQ=255)

                                                    ttGGAAACGTTACCTCTCTCAGGTTTTCTTTTCAAAACTGAAGTTACTCCCCAGCCTTCCATTTCAACCGCTGGCTGGTTTCTCTCGTTTATAGCAATACAACCTTATACTTCTTCACATCCAAAAACTGCAAAAACTcc                                                                                         >  1:3599664/1‑140 (MQ=255)

                                                    ttGGAAACGTTACCTCTCTCAGGTTTTCTTTTCAAAACTGAAGTTACTCCCCAGCCTTCCATTTCAACCGCTGGCTGGTTTCTCTCGTTTATAGCAATACAACCTTATACTTCTTCACATCCAAAAACTGCAAAAACTcc                                                                                         >  1:3010023/1‑140 (MQ=255)

                                                    ttGGAAACGTTACCTCTCTCAGGTTTTCTTTTCAAAACTGAAGTTACTCCCCAGCCTTCCATTTCAACCGCTGGCTGGTTTCTCTCGTTTATAGCAATACAACCTTATACTTCTTCACATCCAAAAACTGCAAAAACTcc                                                                                         >  1:6416/1‑140 (MQ=255)

                                                    ttGGAAACGTTACCTCTCTCAGGTTTTCTTTTCAAAACTGAAGTTACTCCCCAGCCTTCCATTTCAACCGCTGGCTGGTTTCTCTCGTTTATAGCAATACAACCTTATACTTCTTCACATCCAAAAACTGCAAAAACTcc                                                                                         >  1:3450416/1‑140 (MQ=255)

                                                     tGGAAACGTTACCTCTCTCAGGTTTTCTTTTCAAAACTGAAGTTACTCCCCAGCCTTCCATTTCAACCGCTGGCTGGTTTCTCTCGTTTATAGCACTACAACCTTATACTTCTTCACATCCAAAAACTGCAAAAACTccc                                                                                        >  1:5051877/1‑140 (MQ=255)

                                                      ggAAACGTTACCTCTCTCAGGTTTTCTTTTCAAAACTGAAGTTACTCCCCAGCCTTCCATTTCAACCGCTGGCTGGTTTCTCTCGTTTATAGCAATACAACCTTATACTTCTTCACATCCAAAAACTGCAAAAACTCCCt                                                                                       >  2:786870/1‑140 (MQ=255)

                                                      ggAAACGTTACCTCTCTCAGGTTTTCTTTTCAAAACTGAAGTTACTCCCCAGCCTTCCATTTCAACCGCTGGCTGGTTTCTCTCGTTTATAGCAATACAACCTTATACTTCTTCACATCCAAAAACTGCAAAAACTCCCt                                                                                       >  1:1407977/1‑140 (MQ=255)

                                                      ggAAACGTTACCTCTCTCAGGTTTTCTTTTCAAAACTGAAGTTACTCCCCAGCCTTCCATTTCAACCGCTGGCTGGTTTCTCTCGTTTATAGCAATACAACCTTATACTTCTTCACATCCAAAAACTGCAAAAACTCCCt                                                                                       >  1:271881/1‑140 (MQ=255)

                                                      ggAAACGTTACCTCTCTCAGGTTTTCTTTTCAAAACTGAAGTTACTCCCCAGCCTTCCATTTCAACCGCTGGCTGGTTTCTCTCGTTTATAGCAATACAACCTTATACTTCTTCACATCCAAAAACTGCAAAAACTCCCt                                                                                       >  2:4521117/1‑140 (MQ=255)

                                                              tACCTCTCTCAGGTTTTCTTTTCAAAACTGAAGTTACTCCCCAGCCTTCCATTTCAACCGCTGGCTGGTTTCTCTCGTTTATAGCAATACAACCTTATACTTCTTCACATCCAAAAACTGCAAAAACTCCCTCGCCAGCa                                                                               >  1:2256872/1‑140 (MQ=255)

                                                                  tctctcAGGTTTTCTTTTCAAATCTGAAGTTACTCCCCAGCCTTCCATTTCAACCGCTGGCTGGTTTCTCTCGTTTATAGCAATACAACCTTATACTTCTTCACATCCAAAAACTGCAAAAACTCCCTCGCCAGCACTTc                                                                           <  1:1765614/140‑1 (MQ=255)

                                                                  tctctcAGGTTTTCTTTTCAAAACTGAAGTTACTCCCCAGCCTTCCATTTCAACCGCTGGCTGGTTTCTCTCGTTTATAGCAATACAACCTTATACTTCTTCACATCCAAAAACTGCAAAAACTCCCTCGCCAGCACTTc                                                                           <  1:2548337/140‑1 (MQ=255)

                                                                  tctctcAGGTTTTCTTTTCAAAACTGAAGTTACTCCCCAGCCTTCCATTTCAACCGCTGGCTGGTTTCTCTCGTTTATAGCAATACAACCTTATACTTCTTCACATCCAAAAACTGCAAAAACTCCCTCGCCAGCACTTc                                                                           <  1:42680/140‑1 (MQ=255)

                                                                  tctctcAGGTTTTCTTTTCAAAACTGAAGTTACTCCCCAGCCTTCCATTTCAACCGCTGGCTGGTTTCTCTCGTTTATAGCAATACAACCTTATACTTCTCCACATCCAAAAACTGCAAAAACTCCCTCGCCAGCACTTc                                                                           <  1:3392426/140‑1 (MQ=255)

                                                                      tcAGGTTTTCTTTTCAAAACTGAAGTTACTCCCCAGCCTTCCATTTCAACCGCTGGCTGGTTTCTCTCGTTTATAGCAATACAACCTTATACTTCTTCACATCCAAAAACTGCAAAAACTCCCTCGCCAGCACTTCCgg                                                                        <  1:4948432/139‑1 (MQ=255)

                                                                      tcAGGTTTTCTTTTCAAAACTGAAGTTACTCCCCAGCCTTCCATTTCAACCGCTGGCTGGTTTCTCTCGTTTATAGCAATACAACCTTATACTTCTTCACATCCAAAAACTGCAAAAACTCCCTCGCCAGCACTTCCGgc                                                                       >  1:3413002/1‑140 (MQ=255)

                                                                      tcAGGTTTTCTTTTCAAAACTGAAGTTACTCCCCAGCCTTCCATTTCAACCGCTGGCTGGTTTCTCTCGTTTATAGCAATACAACCTTATACTTCTTCACATCCAAAAACTGCAAAAACTCCCTCGCCAGCACTTCCGgc                                                                       >  1:1214677/1‑140 (MQ=255)

                                                                              tcttttcAAAACTGAAGTTACTCCCCAGCCTTCCATTTCAACCGCTGGCTGGTTTCTCTCGTTTATAGCAATACAACCTTATACTTCTTCACATCCAAAAACTGCAAAAACTCCCTCGCCAGCACTTCCGGCGCATGCGt                                                               >  1:2817731/1‑140 (MQ=255)

                                                                              tcttttcAAAACTGAAGTTACTCCCCAGCCTTCCATTTCAACCGCTGGCTGGTTTCTCTCGTTTATAGCAATACAACCTTATACTTCTTCACATCCAAAAACTGCAAAAACTCCCTCGCCAGCACTTCCGGCGCATGCGt                                                               >  1:2022495/1‑140 (MQ=255)

                                                                               cttttcAAAACTGAAGTTACTCCCCAGCCTTCCATTTCAACCGCTGGCTGGTTTCTCTCGTTTATAGCAATACAACCTTATACTTCTTCACATCCAAAAACTGCAAAAACTCCCTCGCCAGCACTTCCGGCGCATGCGTc                                                              <  1:4446491/140‑1 (MQ=255)

                                                                                ttttcAAAACTGAAGTTACTCCCCAGCCTTCCATTTCAACCGCTGGCTGGTTTCTCTCGTTTATAGCAATACAACCTTATACTTCTTCACATCCAAAAACTGCAAAAACTCCCTCGCCAGCACTTCCGGCGCATGCGTCt                                                             <  2:3413002/140‑1 (MQ=255)

                                                                                            aaGTTACTCCCCAGCCTTCCATTTCAACCGCTGGCTGGTTTCTCTCGTTTATAGCAATACAACCTTATACTTCTTCACATCCAAAAACTGCAAAAACTCCCTCGCCAGCACTTCCGGCGCATGCGTCTTCCCTTCATCCa                                                 >  2:2209236/1‑140 (MQ=255)

                                                                                            aaGTTACTCCCCAGCCTTCCATTTCAACCGCTGGCTGGTTTCTCTCGTTTATAGCAATACAACCTTATACTTCTTCACATCCAAAAACTGCAAAAACTCCCTCGCCAGCACTTCCGGCGCATGCGTCTTCCCTTCATCCa                                                 >  2:1965113/1‑140 (MQ=255)

                                                                                               ttACTCCCCAGCCTTCCATTTCAACCGCTGGCTGGTTTCTCTCGTTTATAGCAATACAACCTTATACTTCTTCACATCCAAAAACTGCAAAAACTCCCTCGCCAGCACTTCCGGCGCATGCGTCTTCCCTTCATCCAGcc                                              <  1:348748/140‑1 (MQ=255)

                                                                                                 aCTCCCCAGCCTTCCATTTCAACCGCTGGCTGGTTTCTCTCGTTTATCGCAATACAACCTTCTACTTCTTCACATCCAAAAACTGCAAAAACTCCCTCGCCAGCACTTCCGGCGCATGCGTCTTCCCTTCATCCAGCCGa                                            >  1:4592773/1‑140 (MQ=255)

                                                                                                             tCCATTTCAACCGCTGGCTGGTTTCTCTCGTTTATAGCAATACAACCTTATACTTCTTCACATCCAAAAACTGCAAAAACTCCCTCGCCAGCACTTCCGGCGCATGCGTCTTCCCTTCATCCAGCCGATACAAAATCAGc                                >  2:4192909/1‑140 (MQ=255)

                                                                                                                          ctggctggTTTCTCTCGTTTATAGCAATACAACCTTATACTTCTTCACATCCAAAAACTGCAAAAACTCCCTCGCCAGCACTTCCGGCGCATGCGTCTTCCCTTCATCCAGCCGATACAAAATCAGCCCGATAATCATcg                   <  1:4035862/140‑1 (MQ=255)

                                                                                                                             gctggTTTCTCTCGTTTATAGCAATACAACCTTATACTTCTTCACATCCAAAAACTGCAAAAACTCCCTCGCCAGCACTTCCGGCGCATGCGTCTTCCCTTCATCCAGCCGATACAAAATCAGCCCGATAATCATCGCgg                <  1:3252515/140‑1 (MQ=255)

                                                                                                                                ggTTTCTCTCGTTTATAGCAATACAACCTTATACTTCTTCACATCCAAAAACTGCAAAAACTCCCTCGCCAGCACTTCCGGCGCATGCGTCTTCCCTTCATCCAGCCGATACAAAATCAGCCCGATAATCATCGCGGATa             <  2:927858/140‑1 (MQ=255)

                                                                                                                                      tctcGTTTATAGCAATACAACCTTATACTTCTTCACATCCAAAAACTGCAAAAACTCCCTCGCCAGCACTTCCGGCGCATGCGTCTTCCCTTCATCCAGCCGATACAAAATCAGCCCGATAATCATCGCGGATACAtagt       <  2:1407977/140‑1 (MQ=255)

                                                                                                                                      tctcGTTTATAGCAATACAACCTTATACTTCTTCACATCCAAAAACTGCAAAAACTCCCTCGCCAGCACTTCCGGCGCATGCGTCTTCCCTTCATCCAGCCGATACAAAATCAGCCCGATAATCATCGCGGATACAtagt       <  1:412954/140‑1 (MQ=255)

                                                                                                                                      tctcGTTTATAGCAATACAACCTTATACTTCTTCACATCCAAAAACTGCAAAAACTCCCTCGCCAGCACTTCCGGCGCATGCGTCTTCCCTTCATCCAGCCGATACAAAATCAGCCCGATAATCATCGCGGATACAtagt       <  1:2828607/140‑1 (MQ=255)

                                                                                                                                      tctcGTTTATAGCAATACAACCTTATACTTCTTCACATCCAAAAACTGCAAAAACTCCCTCGCCAGCACTTCCGGCGCATGCGTCTTCCCTTCATCCAGCCGATACAAAATCAGCCCGATAATCATCGCGGATACAtagt       <  1:2386363/140‑1 (MQ=255)

                                                                                                                                      tctcGTTTATAGCAATACAACCTTATACTTCTTCACATCCAAAAACTGCAAAAACTCCCTCGCCAGCACGTCCGGCGCATGCGTCTTCCCTTCATCCAGCCGATACAAAATCAGCCCGATAATCATCGCGGATACAtagt       <  2:4123296/140‑1 (MQ=255)

                                                                                                                                       ctcGTTTATAGCAATACAACCTTATACTTCTTCACATCCAAAAACTGCAAAAACTCCCTCGCCAGCACTTCCGGCGCATGCGTCTTCCCTTCATCCAGCCGATACAAAATCAGCCCGATAATCATcg                   <  1:5115666/127‑1 (MQ=255)

                                                                                                                                       ctcGTTTATAGCAATACAACCTTATACTTCTTCACATCCAAAAACTGCAAAAACTCCCTCGCCAGCACTTCCGGCGCATGCGTCTTCCCTTCATCCAGCCGATACAAAATCAGCCCGATAATCATcg                   <  1:4021116/127‑1 (MQ=255)

                                                                                                                                           tttATAGCAATACAACCTTATACTTCTTCACATCCAAAAACTGCAAAAACTCCCTCGCCAGCACTTCCGGCGCATGCGTCTTCCCTTCATCCAGCCGATACAAAATCAGCCCGATAATCATCGCGGATACCTAGTAGGCa  >  2:464566/1‑140 (MQ=255)

                                                                                                                                           tttATAGCAATACAACCTTATACTTCTTCACATCCAAAAACTGCAAAAACTCCCTCGCCAGCACTTCCGGCGCATGCGTCTTCCCTTCATCCAGCCGATACAAAATCAGCCCGATAATCATCGCGGATACATAGTAGGCa  >  2:1028812/1‑140 (MQ=255)

GTGACACAACGACACAGAACCCGGACTGAGTATCCGGGCAAATGTATATCCGTTGGAAACGTTACCTCTCTCAGGTTTTCTTTTCAAAACTGAAGTTACTCCCCAGCCTTCCATTTCAACCGCTGGCTGGTTTCTCTCGTTTATAGCAATACAACCTTATACTTCTTCACATCCAAAAACTGCAAAAACTCCCTCGCCAGCACTTCCGGCGCATGCGTCTTCCCTTCATCCAGCCGATACAAAATCAGCCCGATAATCATCGCGGATACATAGTAGGCA  >  NZ_CP034943/3934295‑3934573

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.