New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NZ_CP034943 = 1773981215 (1.150)3 (0.020) 3/268 10.2 1.5% coding (12490/15141 nt) EO946_RS09125 non‑ribosomal peptide synthetase
?NZ_CP034943 = 3717287 175 (0.940)intergenic (‑189/‑131) spsA/gerQ spore coat dTDP‑glycosyltransferase SpsA/spore coat protein GerQ
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 218 total aligned reads displayed.

AGAGGAGGTTATTGATCATCATCGTCTCGCGAAGCAGATCGCTGATGAATTTTATTCAGATTCTCATGATACGGAGATTTGCTACAGAGGCGGTTTGCGGTATCAGGCTTTTCTAAAAGCGTATTCTGAAACAGGTGAGGGAGCCGAACAAAGGATGGCCTTCCCGAAAGATCATGTGCTTTTCATTACAGGCGGGACACGAGGCATTGGACTATTATGTGCCCGGCATTTTGCGGAGCACTATGGAGTGAAAAAGCTGGTGCTGACAGGGCGAGAGCA  >  NZ_CP034943/1773842‑1774120
                                                                                                                                           |                                                                                                                                           
agagGAGGTTATTGATCATCATCGTCTCGCGAAGCAGATCGCTGATGAATTTTATTCAGATTCTCATGATACGGAGATTTGCTACAGAGGCGGTTTGCGATATCAGGCTTTTCTAAAAGCGTATTCTGAAACAGGTGAgg                                                                                                                                             <  1:1515660/140‑1 (MQ=255)
agagGACGTTATTGATCATCATCGTCTCGCGAAGCAGCTCGCTGATGAAGGTTATTCAGATTCTCATGATACGGAGATTTGCTACAGAGGCGGTTTGCGGTATCAGGCTTTTCTAAAAGCGTAATCTGAAACAGGTGAgg                                                                                                                                             <  2:2355277/140‑1 (MQ=255)
  aggaggTTATTGATCATCATCGTCTCGCGAAGCAGATCGCTGATGAATTTTATTCAGATTCTCATGATACGGAGATTTGCTACAGAGGCGGTTTGCGGTATCAGGCTTTTCTAAAAGCGTATTCTGAAACAGGTGAGGGa                                                                                                                                           >  1:644867/1‑140 (MQ=255)
  aggaggTTATTGATCATCATCGTCTCGCGAAGCAGATCGCTGATGAATTTTATTCAGATTCTCATGATACGGAGATTTGCTACAGAGGCGGTTTGCGGTATCAGGCTTTTCTAAAAGCGTATTCTGAAACAGGTGAGGGa                                                                                                                                           >  2:559171/1‑140 (MQ=255)
  aggaggTTATTGATCATCATCGTCTCGCGAAGCAGATCGCTGATGAATTTTATTCAGATTCTCATGATACGGAGATTTGCTACAGAGGCGGTTTGCGGTATCAGGCTTTTCTAAAAGCGTAGTCTGAAACAGGTGAGGGa                                                                                                                                           >  2:1502577/1‑140 (MQ=255)
   ggaggTTATTGATCATCATCGTCTCGCGAAGCAGATCGCTGATGAATTTTATTCAGATTCTCATGATACGGAGATTTGCTACAGAGGCGGTTTGCGGTATCAGGCTTTTCTAAAAGCGTATTCTGAAACAGGTGAGGGAg                                                                                                                                          <  1:2503507/140‑1 (MQ=255)
   ggaggTTATTGATCATCATCGTCTCGCGAAGCAGATCGCTGATGAATTTTATTCAGATTCTCATGATACGGAGATTTGCTACAGAGGCGGTTTGCGGTATCAGGCTTTTCTAAAAGCGTATTCTGAAACAGGTGAGGGAg                                                                                                                                          <  2:2390910/140‑1 (MQ=255)
   ggaggTTATTGATCATCATCGTCTCGCGAAGCAGATCGCTGATGAATTTTATTCAGATTCTCATGATACGGAGATTTGCTACAGAGGCGGTTTGCGGTATCAGGCTTTTCTAAAAGCGTATTCTGAAACAGGTGAGGGAg                                                                                                                                          <  2:427527/140‑1 (MQ=255)
   ggaggTTATTGATCATCATCGTCTCGCGAAGCAGATCGCTGATGAATTTTATTCAGATTCTCATGATACGGAGATTTGCTACAGAGGCGGTTTGCGGTATCAGGCTTTTCTAAAAGCGTATTCTGAAACAGGTGAGGGAg                                                                                                                                          <  2:936069/140‑1 (MQ=255)
     aggTTATTGATCATCATCGTCTCGCGAAGCAGATCGCTGATGAATTTTATTCAGATTCTCATGATACGGAGATTTGCTACAGAGTCGGTTTGCGGTAACAAGGTTTTATAAAAGCGTATTCTGAAACAGGTGAGGGAGcc                                                                                                                                        <  1:2851650/140‑1 (MQ=255)
       gTTATTGATCATCATCGTCTCGCGAAGCAGATCGCTGATGAATTTTATTCAGATTCTCATGATACGGAGATTTGCTACAGAGGCGGTTTGCGGTATCAGGCTTTTCTAAAAGCGTATTCTGAAACAGGTGAGGGAg                                                                                                                                          <  2:1621647/136‑1 (MQ=255)
       gTTATTGATCATCATCGTCTCGCGAAGCAGATCGCTGATGAATTTTATTCAGATTCTCATGATACGGAGATTTGCTACAGAGGCGGTTTGCGGTATCAGGCTTTTCTAAAAGCGTATTCTGAAACAGGTGAGGGAGCGGa                                                                                                                                      >  2:1019134/1‑140 (MQ=255)
         tATTGATCATCATCGTCTCGCGAAGCAGATCGCTGATGAATTTTATTCAGATTCTCATGATACGGAGATTTGCTACAGAGGCGGTTTGCGGTATCAGGCTTTTCTAAAAGCGTATTCTGAAACAGGTGAGGGAGCCGAAc                                                                                                                                    <  1:1043181/140‑1 (MQ=255)
          aTTGATCATCATCGTCTCGCGAAGCAGATCGCTGATGAATTTTATTCAGATTCTCATGATACGGAGATTTGCTACAGAGGCGGTTTGCGGTATCAGGCTTTTCTAAAAGCGTATTCTGAAACAGGTGAGGGAGCCGAACa                                                                                                                                   >  2:340636/1‑140 (MQ=255)
          aTTGATCATCATCGTCTCGCGAAGCAGATCGCTGATGAATTTTATTCAGATTCTCATGATACGGAGATTTGCTACAGAGGCGGTTTGCGGTATCAGGCTTTTCTAAAAGCGTATTCTGAAACAGGTGAGGGAGCCGAACa                                                                                                                                   >  2:66973/1‑140 (MQ=255)
          aTTGATCATCATCGTCTCGCGAAGCAGATCGCTGATGAATTTTATTCAGATTCTCATGATACGGAGATTTGCTACAGAGGCGGTTTGCGGTATCAGGCTTTTCTAAAAGCGTATTCTGAAACAGGTGAGGGAGCCGAACa                                                                                                                                   <  1:1580441/140‑1 (MQ=255)
            tGATCATCATCGTCTCGCGAAGCAGATCGCTGATGAATTTTATTCAGATTCTCATGATACGGAGATTTGCTACAGAGGCGGTTTGCGGTATCAGGCTTTTCTAAAAGCGTATTCTGAAACAGGTGAGGGAGCCGAACaaa                                                                                                                                 >  1:1132771/1‑140 (MQ=255)
            tGATCATCATCGTCTCGCGAAGCAGATCGCTGATGAATTTTATTCAGATTCTCATGATACGGAGATTTGCTACAGAGGCGGTTTGCGGTATCAGGCTTTTCTAAAAGCGCATTCTGAAACAGGTGAGGGAGCCGAACaaa                                                                                                                                 >  1:2485513/1‑140 (MQ=255)
              atcatcatcGTCTCGCGAAGCAGATCGCTGATGAATTTTATTCAGATTCTCATGATACGGAGATTTGCTACAGAGGCGGTTTGCGGTATCAGGCTTTTCTAAAAGCGTATTCTGAAACAGGTGAGGGAGCCGAACAAAgg                                                                                                                               >  1:2362246/1‑140 (MQ=255)
              atcatcatcGTCTCGCGAAGCAGATCGCTGATGAATTTTATTCAGATTCTCATGATACGGAGATTTGCTACAGAGGCGGTTTGCGGTATCAGGCTTTTCTAAAAGCGTATTCTGAAACAGGTGAGGGAGCCGAACAAAgg                                                                                                                               >  1:2624991/1‑140 (MQ=255)
               tcatcatcGTCTCGAGAAGCAGATCGCTGATGAATTTTATTCAGATTCTCATGATACGGAGATTTGCTACAGAGGCGGTTTGCGGTATCAGGCTTTTCTAAAAGCGTATTCTGAAACAGGTGAGGGAGCCGAACAAAGGa                                                                                                                              <  1:1475320/140‑1 (MQ=255)
                 atcatcGTCTCGCGAAGCAGATCGCTGATGAATTTTATTCAGATTCTCATGATACGGAGATTTGCTACAGAGGCGGTTTGCGGTATCAGGCTTTTCTAAAAGCGTATTCTGAAACAGGTGAGGGAg                                                                                                                                          <  2:326322/126‑1 (MQ=255)
                 atcatcGTCTCGCGAAGCAGATCGCTGATGAATTTTATTCAGATTCTCATGATACGGAGATTTGCTACAGAGGCGGTTTGCGGTATCAGGCTTTTCTAAAAGCGTATTCTGAAACAGGTGAGGGAg                                                                                                                                          >  1:326322/1‑126 (MQ=255)
                     tcGTCTCGCGAAGCAGATCGCTGATGAATTTTATTCAGATTCTCATGATACGGAGATTTGCTACAGAGGCGGTTTGCGGTATCAGGCTTTTCTAAAAGCGTATTCTGAAACAGGTGAGGGAGCCGAACAAAGGATGGCCt                                                                                                                        <  1:1257906/140‑1 (MQ=255)
                        tctcGCGAAGCAGATCGCTGATGAATTTTATTCAGATTCTCATGATACGGAGATTTGCTACAGAGGCGGTTTGCGGTATCAGGCTTTTCTAAAAGCGTATTCTGAAACAGGTGAGGGAGCCGAACAAAGGATGGCCTTcc                                                                                                                     >  2:714019/1‑140 (MQ=255)
                        tctcGCGAAGCAGATCGCTGATGAATTTTATTCAGATTCTCATGATACGGAGATTTGCTACAGAGGCGGTTTGCGGTATCAGGCTTTTCTAAAAGCGTATTCTGAAACAGGTGAGGGAGCCGAACAAAGGATGGCCTTcc                                                                                                                     >  1:67287/1‑140 (MQ=255)
                        tctcGCGAAGCAGATCGCTGATGAATTTTATTCAGATTCTCATGATACGGAGATTTGCTACAGAGGCGGTTTGCGGTATCAGGCTTTTCTAAAAGCGTATTCTGAAACAGGTGAGGGAGCCGAACAAAGGATGGCCTTcc                                                                                                                     >  1:2579099/1‑140 (MQ=255)
                            gcgAAGCAGATCGCTGATGAATTTTATTCAGATTCTCATGATACGGAGATTTGCTACAGAGGCGGTTTGCGGTATCAGGCTTTTCTAAAAGCGTATTCTGAAACAGGTGAGGGAGCCGAACAAAGGATGGCCTTCCCGaa                                                                                                                 <  1:209942/140‑1 (MQ=255)
                            gcgAAGCAGATCGCTGATGAATTTTATTCAGATTCTCATGATACGGAGATTTGCTACAGAGGCGGTTTGCGGTATCAGGCTTTTCTAAAAGCGTATTCTGAAACAGGTGAGGGAGCCGAACAAAGGATGGCCTTCCCGaa                                                                                                                 <  2:1309412/140‑1 (MQ=255)
                            gcgAAGCAGATCGCGGATGAATTTTATTCAGATTCTCATGATACGGAGATTTGCTACAGAGGCGGTTTGCGGTATCAGGCTTTTCTAAAAGCGTATTCTGAAACAGGTGAGGGAGCCGAACAAAGGATGGCCTTCCCGaa                                                                                                                 <  2:2043610/140‑1 (MQ=255)
                                  cAGATCGCTGATGAATTTTATTCAGATTCTCATGATACGGAGATTTGCTACAGAGGCGGTTTGCGGTATCAGGCTTTTCTAAAAGCGTATTCTGAAACAGGTGAGGGAGCCGAACAAAGGATGGCCTTCCCGAAAGATCa                                                                                                           >  1:2750529/1‑140 (MQ=255)
                                      tCGCTGATGAATTTTATTCAGATTCTCATGATACGGAGATTTGCTACAGAGGCGGTTTGCGGTATCAGGCTTTTCTAAAAGCGTATTCTGAAACAGGTGAGGGAGCCGAACAAAGGATGGCCTTCCCGAAAGATCAtgtg                                                                                                       <  2:405804/140‑1 (MQ=255)
                                         cTGATGAATTTTATTCAGATTCTCATGATACGGAGATTTGCTACAGAGGCGGTTTGCGGTATCAGGCTTTTCTAAAAGCGTATTCTGAAACAGGTGAGGGAGCCGAACAAAGGATGGCCTTCCCGAAAGATCATGTGCtt                                                                                                    <  1:1193401/140‑1 (MQ=255)
                                          tgatgaATTTTATTCAGATTCTCATGATACGGAGATTTGCTACAGAGGCGGTTTGCGGTATCAGGCTTTTCTAAAAGCGTATTCTGAAACAGGTGAGGGAGCCGAACAAAGGATGGCCTTCCCGAAAGATCATGTGCttt                                                                                                   >  2:838989/1‑140 (MQ=255)
                                                    tagtCAGATTCTCATGATACGGAGATTTGCTACAGAGGCGGTTTGCGGTATCAGGCTTTTCTAAAAGCGTATTCTGAAACAGGTGAGGGAGCCGAACAAAGGATGGCCTTCCCGAAAGATCATGTGCTTTTCATTACAgg                                                                                         <  1:2804179/137‑1 (MQ=255)
                                                    tATTCAGATTCTCATGATACGGAGATTTGCTACAGAGGCGGTTTGCGGTATCAGGCTTTTCTAAAAGCGTATTCTGAAACAGGTGAGGGAGCCGAACAAAGGATGGCCTTCCCGAAAGATCATGTGCTTTTCATTACAgg                                                                                         <  2:1995883/140‑1 (MQ=255)
                                                    tATTCAGATTCTCATGATACGGAGATTTGCTACAGAGGCGGTTTGCGGTATCAGGCTTTTCTAAAAGCGTATTCTGAAACAGGTGAGGGAGCCGAACAAAGGATGGCCTTCCCGAAAGATCATGTGCTTTTCATTACAgg                                                                                         <  1:1368565/140‑1 (MQ=255)
                                                    tATTCAGATTCTCATGATACGGAGATTTGCTACAGAGGCGGTTTGCGGTATCAGGCTTTTCTAAAAGCGTATTCTGAAACAGGTGAGGGAGCCGAACAAAGGAGGGCCGTCCCGAAAGATCATGTGCTTTTCATTACAgg                                                                                         <  1:559171/140‑1 (MQ=255)
                                                    tATTCAGATTCTCATGATACGGAGATTTGCTACAGAGGCGGTTTGCGGTATCAGGCTTTTCTAAAAGCGTATTCGGAAACAGGTGAGGGAGCCGAACAAAGGATGGCCGTCCCGAAAGATCATGTGCTTTTCATTACAgg                                                                                         <  1:520960/140‑1 (MQ=255)
                                                      ttCAGATTCTCATGATACGGAGATTTGCTACAGAGGCGGTTTGCGGTATCAGGCTTTTCTAAAAGCGTATTCTGAAACAGGTGAGGGAGCCGAACAAAGGATGGCCTTCCCGAAAGATCATGTGCTTTTCATTACAGGCg                                                                                       <  2:2624991/140‑1 (MQ=255)
                                                           aTTCTCATGATACGGAGATTTGCTACAGAGGCGGTTTGCGGTATCAGGCTTTTCTAAAAGCGTATTCTGAAACAGGTGAGGGAGCCGAACAAAGGATGGCCTTCCCGAAAGATCATGTGCTTTTCATTACAGGCGGGaca                                                                                  <  1:1926636/140‑1 (MQ=255)
                                                             tctcATGATACGGAGATTTGCTACAGAGGCGGTTTGCGGTATCAGGCTTTTCTAAAAGCGTATTCTGAAACAGGTGAGGGAGCCGAACAAAGGATGGCCTTCCCGAAAGATCATGTGCTTTTCATTACAGGCGGGACACg                                                                                <  1:490769/140‑1 (MQ=255)
                                                             tctcATGATACGGAGATTTGCTACAGAGGCGGTTTGCGGTATCAGGCTTTTCTAAAAGCGTATTCTGAAACAGGTGAGGGAGCCGAACAAAGGATGGCCTTCCCGAAAGATCATGTGCTTTTCATTACAGGCGGGACACg                                                                                <  1:1983012/140‑1 (MQ=255)
                                                             tctcATGATACGGAGATTTGCTACAGAGGCGGTTTGCGGTATCAGGCTTTTCTAAAAGCGTATTCTGAAACAGGTGAGGGAGCCGAACAAAGGATGGCCTTCCCGAAAGATCATGTGCTTTTCATTACAGGCGGGACACg                                                                                <  2:1827977/140‑1 (MQ=255)
                                                                cATGATACGGAGATTTGCTACAGAGGCGGTTTGCGGTATCAGGCTTTTCTAAAAGCGTATTCTGAAACAGGTGAGGGAGCCGAACAAAGGATGGCCTTCCCGAAAGATCATGTGCTTTTCATTACAGGCGGGACACGAgg                                                                             >  1:1307951/1‑140 (MQ=255)
                                                                  tGATACGGAGATTTGCTACAGAGGCGGTTTGCGGTATCAGGCTTTTCTAAAAGCGTATTCTGAAACAGGTGAGGGAGCCGAACAAAGGATGGCCTTCCCGAAAGATCATGTGCTTTTCATTACAGGCGGGACACGAGGCa                                                                           <  1:911306/140‑1 (MQ=255)
                                                                  tGATACGGAGATTTGCTACAGAGGCGGTTTGCGGTATCAGGCTTTTCTAAAAGCGTATTCTGAAACAGGTGAGGGAGCCGAACAAAGGATGGCCTTCCCGAAAGATCATGTGCTTTTCATTACAGGCGGGACACGAGGCa                                                                           <  1:999482/140‑1 (MQ=255)
                                                                  tGATACGGAGATTTGCTACAGAGGCGGTTTGCGGTATCAGGCTTTTCTAAAAGCGTATTCTGAAACAGGTGAGGGAGCCGAACAAAGGATGGCCTTCCCGAAAGATCATGTGCTTTTCATTACAGGCGGGACACGAGGCa                                                                           <  2:2057179/140‑1 (MQ=255)
                                                                  tGATACGGAGATTTGCTACAGAGGCGGTTTGCGGTATCAGGCTTTTCTAAAAGCGTATTCTGAAACAGGTGAGGGAGCCGAACAAAGGATGGCCTTCCCGAAAGATCATGTGCTTTTCATTACAGGCGGGACACGAGGCa                                                                           <  2:1784251/140‑1 (MQ=255)
                                                                  tGATACGGAGATTTGCTACAGAGGCGGTTTGCGGTATCAGGCTTTTCTAAAAGCGTATTCTGAAACAGGTGAGGGAGCCGAACAAAGGATGGCCTTCCCGAAAGATCATGTGCTTTTCATTACAGGCGGGACACGAGGCa                                                                           <  2:642426/140‑1 (MQ=255)
                                                                  tGATACGGAGATTTGCTACAGAGGCGGTTTGCGGTATCAGGCTTTTCTAAAAGCGTATTCTGAAACAGGTGAGGGAGCCGAACAAAGGATGGCCTTCCCGAAAGATCATGTGCTTTTCATTACAGGCGGGACACGAGGCa                                                                           <  1:1842087/140‑1 (MQ=255)
                                                                  tGATACGGAGATTTGCTACAGAGGCGGTTTGCGGTATCAGGCTTTTCTAAAAGCGTATTCTGAAACAGGTGAGGGAGCCGAACAAAGGATGGCCTTCCCGAAAGATCATGTGCTTTTCATTACAGGCGGGACACGAGGCa                                                                           <  2:787710/140‑1 (MQ=255)
                                                                  tGATACGGAGATTTGCTACAGAGGCGGTTTGCGGTATCAGGCTTTTCTAAAAGCGTATTCTGAAACAGGTGAGGGAGCCGAACAAAGGATGGCCTTCCCGAAAGATCATGTGCTTTTCATTACAGGCGGGACACGAGGCa                                                                           <  1:340636/140‑1 (MQ=255)
                                                                  tGATACGGAGATTTGCTACAGAGGCGGTTTGCGGTATCAGGCTTTTCTAAAAGCGCATTCTGAAACAGGTGAGGGAGCCGAACAAAGGATGGCCTTCCCGAAAGATCATGTGCTTTTCATTACAGGCGGGACACGAGGCa                                                                           <  2:2485513/140‑1 (MQ=255)
                                                                  tGAGACGGAGATTTGCTACAGAGGCGGTTTGCGGTATCAGGCTTTTCTAAAAGCGTATTCTGAAACAGGTGAGGGAGCCGAACAAAGGATGGCCTTCCCGAAAGATCATGTGCTTTTCATTACAGGCGGGACACGAGGCa                                                                           <  2:1264388/140‑1 (MQ=255)
                                                                  cgATACGGAGATTTGCTACAGAGGCGGTTTGCGGTATCAGGCTTTTCTAAAAGCGTATTCTGAAACAGGTGAGGGAGCCGAACAAAGGATGGCCTTCCCGAAAGATCATGTGCTTTTCATTACAGGCGGGACACGAGGCa                                                                           <  2:1184451/139‑1 (MQ=255)
                                                                   gATACGGAGATTTGCTAGAGAGGCGGTTTGCTGTATCAGGCTTTTCTAATATCGTATTCTGAAAGAGGTGTGGGAGCCGAACAAAGGATGGCCTTACAGAAAGATCATGTGCTTTTCATTACAGGCGGGACACTAGGCAt                                                                          <  2:825249/140‑1 (MQ=255)
                                                                    aTACGGAGATTTGCTACAGAGGCGGTTTGCGGTATCAGGCTTTTCTAAAAGCGTATTCTGAAACAGGTGAGGGAGCCGAACAAAGGATGGCCTTCCCGAAAGATCATGTGCTTTTCATTACAGGCGGGACACGAGGCAtt                                                                         <  1:1325537/140‑1 (MQ=255)
                                                                    aTACGGAGATTTGCTACAGAGGCGGTTTGCGGTATCAGGCTTTTCTAAAAGCGTATTCTGAAACAGGTGAGGGAGCCGAACAAAGGATGGCCTTCCCGAAAGATCATGTGCTTTTCATTACAGGCGGGACACGAGGCAtt                                                                         >  1:2292683/1‑140 (MQ=255)
                                                                    aTACGGAGATTTGCTACAGAGGCGGTTTGCGGTATCAGGCTTTTCTAAAAGCGTATTCTGAAACAGGTGAGGGAGCCGAACAAAGGATGGCCTTCCCGAAAGATCATGTGCTTTTCATTACAGGCGGGACACGAGGCAtt                                                                         <  1:738064/140‑1 (MQ=255)
                                                                    aTACGGAGATTTGCTACAGAGGCGGTTTGCGGTATCAGGCTTTTCTAAAAGCGTATTCTGAAACAGGTGAGGGAGCCGAACAAAGGATGGCCTTCCCGAAAGATCATGTGCTTTTCATTACAGGCGGGACACGAGGCAtt                                                                         <  1:2059347/140‑1 (MQ=255)
                                                                     tACGGAGATTTGCTACAGAGGCGGTTTGCGGTATCAGGCTTTTCTAAAAGCGTATTCTGAAACAGGTGAGGGAGCCGAACAAAGGATGGCCTTCCCGAAAGATCATGTGCTTTTCATTACAGGCGGGACACGAGGCATTg                                                                        >  2:2579191/1‑140 (MQ=255)
                                                                     tACGGAGATTTGCTACAGAGGCGGTTTGCGGTATCAGGCTTTTCTAAAAGCGTATTCTGAAACAGGTGAGGGAGCCGAACAAAGGATGGCCTTCCCGAAAGATCATGTGCTTTTCATTACAGGCGGGACACGAGGCAGTg                                                                        >  2:2490194/1‑140 (MQ=255)
                                                                       cGGAGATTTGCTACAGAGGCGGTTTGCGGTATCAGGCTTTTCTAATAGCGTTTTCTGAAAGTGGTGTGGGAGCCGAACAAAGGATGGCCTTCCCGAAAGATCATGTGCTTTTCATTACAGGCGGGACACGAGGCATTGGa                                                                      <  2:1560609/140‑1 (MQ=255)
                                                                       cGGAGATTTGCTACAGAGGCGGTTTGCGGTATCAGGCTTTTCTAAAAGCGTATTCTGAAACAGGTGAGGGAGCCGAACAAAGGATGGCCTTCCCGAAAGATCATGTGCTTTTCATTACAGGCGGGACACGAGGCATTGGa                                                                      <  2:604388/140‑1 (MQ=255)
                                                                         gagaGTTGCTACAGAGGCGGTTTGCGGTATCAGGCTTTTCTAAAAGCGTATTCTGAAACAGGTGAGGGAGCCGAACAAAGGATGGCCTTCCCGACAGATCATGTGCTTTTCATTACAGGCGGGACACGAGGCATTGGACt                                                                    <  2:1932803/140‑1 (MQ=255)
                                                                            aTTTGCTACAGAGGCGGTTTGCGGTATCAGGCTTTTCTAAAAGCGTATTCTGAAACAGGTGAGGGAGCCGAACAAAGGATGGCCTTCCCGAAAGATCATGTGCTTTTCATTACAGGCGGGACACGAGGCATTGGACtatt                                                                 <  1:69805/140‑1 (MQ=255)
                                                                             tttGCTACAGAGGCGGTTTGCGGTATCAGGCTTTTCTAAAAGCGTATTCTGAAACAGGTGAGGGAGCCGAACAAAGGATGGCCTTCCCGAAAGATCATGTGCTTTTCATTACAGGCGGGACACGAGGCa                                                                           <  1:1789915/129‑1 (MQ=255)
                                                                               tGCTACAGAGGCGGTTTGCGGTATCAGGCTTTTCTAAAAGCGTATTCTGAAACAGGTGAGGGAGCCGAACAAAGGATGGCCTTCCCGAAAGATCATGTGCTTTTCATTACAGGCGGGACACGAGGCATTGGACTATTAtg                                                              >  1:2521417/1‑140 (MQ=255)
                                                                                   aCAGAGGCGGTTTGCGGTATCAGGCTTTTCTAAAAGCGTATTCTGAAACAGGTGAGGGAGCCGAACAAAGGATGGCCTTCCCGAAAGATCATGTGCTTTTCATTACAGGCGGGACACGAGGCATTGGACTATTATGTGcc                                                          <  1:2328538/140‑1 (MQ=255)
                                                                                      gagGCGGTTTGCGGTATCAGGCTTTTCTAAAAGCGTATTCTGAAACAGGTGAGGGAGCCGAACAAAGGATGGCCTTCCCGAAAGATCATGTGCTTTTCATTACAGGCGGGACACGAGGCATTGGACTATTATGTGCCCgg                                                       >  1:1433907/1‑140 (MQ=255)
                                                                                       agGCGGTTTGCGGTATCAGGCTTTTCTAAAAGCGTATTCTGAAACAGGTGAGGGAGCCGACCAAAGGATGGCCTTCCCGAAAGATCATGTGCTTTTCCTTACAGGCGGGACACGCGGCATTGGACTATTATGTGCCCGGc                                                      >  1:2598677/1‑140 (MQ=255)
                                                                                         gCGGTTTGCGGTATCAGGCTTTTCTAAAAGCGTATTCTGAAACAGGTGAGGGAGCCGAACAAAGGATGGCCTTCCCGAAAGATCATGTGCTTTTCATTACAGGCGGGACACGAGGCa                                                                           <  2:2063346/117‑1 (MQ=255)
                                                                                          cGGTTTGCGGTATCAGGCTTTTCTAAAAGCGTATTCTGAAACAGGTGAGGGAGCCGAACAAAGGATGGCCTTCCCGAAAGATCATGTGCTTTTCATTACAGGCGGGACACGAGGCATTGGACTATTATGTGCCCGGCAtt                                                   <  2:1680714/140‑1 (MQ=255)
                                                                                          cGGTTTGCGGTATCAGGCTTTTCTAAAAGCGTATTCTGAAACAGGTGAGGGAGCCGAACAAAGGATGGCCTTCCCGAAAGATCATGTGCTTTTCATTACAGGCGGGACACGAGGCATTGGACTATTATGTGCCCGGCAtt                                                   <  2:484447/140‑1 (MQ=255)
                                                                                             tttGCGGTATCAGGCTTTTCTAAAAGCGTATTCTGAAACAGGTGAGGGAGCCGAACAAAGGATGGCCTTCCCGAAAGATCATGTGCTTTTCATTACAGGCGGGACACGAGGCATTGGACTATTATGTGCCCGGCATTTTg                                                <  2:1433907/140‑1 (MQ=255)
                                                                                             tctGCGGTATCACGCTTGTCTAAAAGCGTATTCTGAAACAGTTGAGGGAGCCGAACAAAGGATGGCCTTCCCGAAAGAACATGTGCTTTTCATTACAGGCGGGACACGAGGCATTGGACTATTATGTGCCCGGCATTTTg                                                <  2:2256883/138‑1 (MQ=255)
                                                                                               tGCGGTATCAGGCTTTTCTAAAAGCGTATTCTGAAACAGGTGAGGGAGCCGAACAAAGGATGGCCGTCCCGAAAGATCATGTGCTTTTCATTACAGGCGGGACACGAGGCATTGGACTATTATGTGCCCGGCATTTTGCg                                              <  1:822702/140‑1 (MQ=255)
                                                                                               tGCGGTATCAGGCTTTTCTAAAAGCGTATTCTGAAACAGGTGAGGGAGCAGAACAAAGGATGGCCTTCCCGAAAGATCATGTGCTTTTCATTACAGGCGGGACACGAGGCATTGGACTATTATGTGCCCGGCATTTTGCg                                              <  1:1703867/140‑1 (MQ=255)
                                                                                               tGCGGTATCAGGCTTTACTAAAAGCGTATTCTGAAACAGGTGAGGGAGCCGAACAAAGGATGGCCTTCCCGAAAGATCATGTGCTTTTCATTACAGGCGGGACACGAGGCATTGGACTATTATGTGCCCGGCATTTTGCg                                              <  1:2458752/140‑1 (MQ=255)
                                                                                               tGCGGTATCAGGCTTGTCGAACAGCGTATTCTGAAACAGGTGAGGGAGCCGAACAAAGGATGGCCTTCCCGAAAGATCATGTGCTTTTCATTACAGGCGGGACACGAGGCATTGGACTATTATGTGCCCGGCATTTTGCg                                              <  1:1631861/140‑1 (MQ=255)
                                                                                                  ggTATCAGGCTTTTCTAAAAGCGTATTCTGAAACAGGTGAGGGAGCCGAACAAAGGATGGCCTTCCCGAAAGATCATGTGCTTTTCATTACAGGCGGGACACGAGGCATTGGACTATTATGTGCCCGGCATTTTGCGGAg                                           <  1:2490194/140‑1 (MQ=255)
                                                                                                  ggTATCAGGCTTTTCTAAAAGCGTATTCTGAAACAGGTGAGGGAGCCGAACAAAGGATGGCCTTCCCGAAAGATCATGTGCTTTTCATTACAGGCGGGACACGAGGCATTGGACTATTATGTGCCCGGCATTTTGCGGAg                                           <  1:361231/140‑1 (MQ=255)
                                                                                                          gCTTTTCTAAAAGCGTATTCTGACACAGGTGAGGGAGCCGAACAAAGGATGGCCTTCCCGAAAGATCATGTGCTTTTCATTACAGGCGGGACACGAGGCATTGGACTATTATGTGCCCGGCATTTTGCGGAGCACTATgg                                   <  2:2565114/140‑1 (MQ=255)
                                                                                                          gCTTTTCTAAAAGCGTATTCTGAAACAGGTGAGGGAGCCGAACACAGGATGGCCTTCCCGAAAGATCATGTGCTTTTCATTACAGGCGGGACACGAGGCATTGGACTATTATGTGCCCGGCATTTTGCGGAGCACTATgg                                   <  1:2447871/140‑1 (MQ=255)
                                                                                                          gCTTTTCTAAAAGCGTATTCTGAAACAGGTGAGGGAGCCGAACAAAGGATGGCCTTCCCGAAAGATCATGTGCTTTTCATTACAGGCGGGACACGAGGCATTGGACTATTATGTGCCCGGCATTTTGCGGAGCACTATgg                                   <  2:2784875/140‑1 (MQ=255)
                                                                                                          gCTTTTCTAAAAGCGTATTCTGAAACAGGTGAGGGAGCCGAACAAAGGATGGCCTTCCCGAAAGATCATGTGCTTTTCATTACAGGCGGGACACGAGGCATTGGACTATTATGTGCCCGGCATTTTGCGGAGCACTATgg                                   <  1:522249/140‑1 (MQ=255)
                                                                                                          gCTTTTCTAAAAGCGTATTCTGAAACAGGTGAGGGAGCCGAACAAAGGATGGCCTTCCCGAAAGATCATGTGCTTTTCATTACAGGCGGGACACGAGGCATTGGACTATTATGTGCCCGGCATTTTGCGGAGCACTATgg                                   <  2:2423154/140‑1 (MQ=255)
                                                                                                              ttCTAAAAGCGTATTCTGAAACAGGTGAGGGAGCCGAACAAAGGATGGCCTTCCCGAAAGATCAtgtg                                                                                                       >  1:909795/1‑68 (MQ=255)
                                                                                                              ttCTAAAAGCGTATTCTGAAACAGGTGAGGGAGCCGAACAAAGGATGGCCTTCCCGAAAGATCATGTGCTTTTCATTACAGGCGGGACACGAGGCATTGGa                                                                      <  2:1719766/101‑1 (MQ=255)
                                                                                                              ttCTAAAAGCGTATTCTGAAACAGGTGAGGGAGCCGAACAAAGGATGGCCTTCCCGAAAGATCATGTGCTTTTCATTACAGGCGGGACACGAGGCATTGGACTATTATGTGCCCGGCATTTTGCGGAGCACTATGGAGTg                               >  1:2680858/1‑140 (MQ=255)
                                                                                                              ttCTAAAAGCGTATTCTGAAACAGGTGAGGGAGCCGAACAAAGGATGGCCTTCCCGAAAGATCATGTGCTTTTCATTACAGGCGGGACACGAGGCATTGGACTATTATGTGCCCGGCATTTTGCGGAGCACTATGGAGTg                               >  1:2213249/1‑140 (MQ=255)
                                                                                                              ttCTAAAAGCGTATTCTGAAACAGGTGAGGGAGCCGAACAAAGGATGGCCTTCCCGAAAGATCATGTGCTTTTCATTACAGGCGGGACACGAGGCATTGGACTATTATGTGCCCGGCATTTTGCGGAGCACTATGGAGTg                               >  2:2219163/1‑140 (MQ=255)
                                                                                                              ttCTAAAAGCGTATTCTGAAACAGGTGAGGGAGCCGAACAAAGGATGGCCTTCCCGAAAGATCATGTGCTTTTCATTACAGGCGGGACACGAGGCATTGGACTATTATGTGCCCGGCATTTTGCGGAGCACTATGGAGTg                               >  2:1330880/1‑140 (MQ=255)
                                                                                                                        gTATTCTGAAACAGGTGAGGGAGCCGAACAAAGGATGGCCTTCCCGAAAGATCATGTGCTTTTCATTACAGGCGGGACACg                                                                                <  1:693161/81‑1 (MQ=255)
                                                                                                                          aTTCTGAAACAGGTGAGGGAGCCGAACAAAGGATGGCCTTCCCGAAAGATCATGTGCTTTTCATTACAGGCGGGACACGAGGCATTGGACTATTATGTGCCCGGCATTTTGCGGAGCACTATGGAGTGAAAAAGCTGGTg                   <  1:462230/140‑1 (MQ=255)
                                                                                                                               gAAACAGGTGAGGGAGCCGAACAAAGGATGGCCTTCCCGAAAGATCATGTGCTTTTCATTACAGGCGGGACACGAGGCATTGGACTATTATGTGCCCGGCATTTTGCGGAGCACTATGGAGTGAAAAAGCTGGTGCTGAc              <  1:985921/140‑1 (MQ=255)
                                                                                                                                 aaCAGGTGAGGGAGCCGAACAAAGGATGGCCTTCCCGAAAGATCATGTGCTTTTCATTACAGGCGGGACACGAGGCATTGGACTATTATGTGCCCGGCATTTTGCGGAGCACTATGGAGTGAAAAAGCTGGTGCTGACAg            <  2:882917/140‑1 (MQ=255)
                                                                                                                                    aGGTGAGGGAGCCGAACAAAGGATGGCCTTCCCGAAAGATCATGTGCTTTTCATTACAGGCGGGACACGAGGCATTGGACTATTATGTGCCCGGCATTTTGCGGAGCACTATGGAGTGAAAAAGCTGGTGCTGACAGGGc         <  2:2680858/140‑1 (MQ=255)
                                                                                                                                        gAGGGAGCCGAACAAAGGATGGCCTTCCCGAAAGATCATGTGCTTTTCATTACAGGCGGGACACGAGGCATTGGACTATTATGTGCCCGGCATTTTGCGGAGCACTATGGAGTGAAAAAGCTGGTGCTGACAGGGCgaga     <  1:847263/140‑1 (MQ=255)
                                                                                                                                           |                                                                                                                                           
AGAGGAGGTTATTGATCATCATCGTCTCGCGAAGCAGATCGCTGATGAATTTTATTCAGATTCTCATGATACGGAGATTTGCTACAGAGGCGGTTTGCGGTATCAGGCTTTTCTAAAAGCGTATTCTGAAACAGGTGAGGGAGCCGAACAAAGGATGGCCTTCCCGAAAGATCATGTGCTTTTCATTACAGGCGGGACACGAGGCATTGGACTATTATGTGCCCGGCATTTTGCGGAGCACTATGGAGTGAAAAAGCTGGTGCTGACAGGGCGAGAGCA  >  NZ_CP034943/1773842‑1774120

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.