BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NZ_CP034943	607515 =	179 (0.950)	10 (0.050) +GGT	3/264	10.1	6.0%	coding (358/1125 nt)	EO946_RS03185	collagen‑like protein
*	?	NZ_CP034943	= 607637	142 (0.760)	10 (0.050) +GGT	3/264	10.1	6.0%	coding (480/1125 nt)	EO946_RS03185	collagen‑like protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 150 total aligned reads displayed.

GGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTA  >  NZ_CP034943/607499‑607773

 gAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCCGCCGGGGCCACGGGAGCCACAGGGGCTACGGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGc                                                                                                                                        >  1:2452627/1‑140 (MQ=255)

 gAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCaac                                                                                                                                        <  1:1557560/140‑3 (MQ=255)

 gAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACGGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGc                                                                                                                                        >  1:1561400/1‑140 (MQ=255)

 gAAGCTGGACCAGCGGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCaac                                                                                                                                        >  2:1557560/1‑138 (MQ=255)

  caGCTGGACCAGCTGGAGCGACGGGAGCCACAGGAGCTACCGGTGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGcc                                                                                                                                       <  1:2022849/139‑1 (MQ=255)

  aaGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCACCCGGGGCCACGGGAGCCACAGGGGCTACTGCGGACTCCGGAGCAGCCGGAGCGACACCAGCGACGGGGGACGCCGGTCCCGcc                                                                                                                                       >  2:577216/1‑140 (MQ=17)

    gCTGGACCAGCTGGAGCCACGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACCGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCgg                                                                                                                                     <  1:831633/140‑1 (MQ=255)

    ccgggACCAGCCGGAGCGACGGGAGCGACCGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCgg                                                                                                                                     <  1:2193365/137‑1 (MQ=255)

      tGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCATCCGGGGCGACGGGAGCCACAGGGGCTACTGGGGACGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCACCCGGAg                                                                                                                                   >  1:1128561/1‑140 (MQ=255)

          ccAGCTGGAGCGCCGGGACCGACAGGAGCTACCGGGGAAGCGGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACCGGGGAAGCCGGACCAGCCGGAGCGAc                                                                                                                               <  1:1440757/140‑1 (MQ=255)

             gCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAgg                                                                                                                            >  2:479679/1‑140 (MQ=255)

              cTGGAGCGACGGGAGCGACAGGAGCTACCGGGGACGCCGGACCAGCCGGCGCCACGGGAGCCACAGGGGCTACTGGGGAAGACGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGa                                                                                                                           >  1:1504400/1‑140 (MQ=255)

               tGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAg                                                                                                                          <  1:1230265/140‑1 (MQ=255)

                  cgCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTa                                                                                                                       <  1:1355953/139‑1 (MQ=255)

                  cgCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCACCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCACCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTa                                                                                                                       <  1:1185030/139‑1 (MQ=255)

                  aGCGACGGGAGCCACCGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACGGGAGCGACAGGGGCTACGGGGGACGCCGGACCAGCCGGAGCGACAGGAGCGACCGGGGACGCCGGACCACCCGGAGCGCCAGgcgcgg                                                                                                                       >  2:2193365/1‑138 (MQ=11)

                      aCGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGACGGCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCCACggg                                                                                                                   >  2:559003/1‑140 (MQ=255)

                       cGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCGGGAGCGAGAGGAGAGACCGGGGAAGCCGGACCAGCCGGAGCGCCGGGAGCGACCggg                                                                                                                  >  1:27188/1‑140 (MQ=17)

                       cGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCggg                                                                                                                  <  1:1452333/140‑1 (MQ=255)

                       cGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCggg                                                                                                                  <  1:2169431/140‑1 (MQ=255)

                       cGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGCCTACTGGCGAAGCCTGAACAGCCGGAGCGACAGGAGCTACCGGGTAAGCCGGAACAGCCGGAGCGACAGGAGATCCCggg                                                                                                                  >  1:26259/1‑140 (MQ=17)

                        gggAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGACGCCGGACCTGCCGCAGCGACAGGAGCTACCgggg                                                                                                                 >  2:2161395/1‑140 (MQ=255)

                        gggAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGACCTACCGGGGAAGCCGGACCACCCGGAGCGACCGGAGCTACCgggg                                                                                                                 >  1:2047655/1‑140 (MQ=255)

                          gAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCACCCGGAGCGACAGGAGCCACgggagcc                                                                                                               <  1:559003/140‑5 (MQ=255)

                             cGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACCGGGGAAGcc                                                                                                            >  1:1294547/1‑140 (MQ=255)

                             cGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCGACTGGGGCAGCCGGACCCGCCGGAGCGACAGGAGCTACCGGGGCCGCCGGACCAGCCGGAGCGCCAGGAGCTACGCGGGCAGcc                                                                                                            >  1:1600104/1‑140 (MQ=14)

                               aCAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCGACTGGGGAAGGCGGACCAGCCGGAGCGCCAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGTGacccagc                                                                                                          >  1:887033/1‑134 (MQ=14)

                                     gCTACCGGGGACGCCGGACCAGCCGGGGCCCCGGGAGCCACAGGGGCGACTGGGGAAGCGGGACCCGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAAc                                                                                                    <  1:1631381/140‑1 (MQ=18)

                                        aCCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCgg                                                                                                 <  1:2337496/140‑1 (MQ=255)

                                        aCCGGCGAACCAGGACCAGCCGGCGCCCCGGGCGCCAACGGTGCAACTGGCCACGCGGGACCACCCGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCgg                                                                                                 <  2:626122/140‑1 (MQ=14)

                                         ccGGTGAAGCCGGACCAGCCGGCGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGa                                                                                                <  1:316810/140‑1 (MQ=255)

                                          cGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAg                                                                                               <  2:2579501/140‑1 (MQ=255)

                                              gAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGTACCAGCCGGCGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGAc                                                                                           <  1:773107/140‑1 (MQ=255)

                                              gAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGAc                                                                                           <  1:479679/140‑1 (MQ=255)

                                                 gCCCGACCACCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAgg                                                                                        <  1:1673424/140‑1 (MQ=255)

                                                               ggCCACGGGAGCCACAGGGGCTAGTGGGGAAGGCGGACCAGCCGGAGCGAGAGGAGCTACCGGGGACGCCGGACCACCCGGAGCGCCAGGAGCGACGGGGGACGCAGGACCACGCGGAGCGGCGGGAGCGAcctgcgggg                                                                          >  1:1016176/1‑133 (MQ=255)

                                                                    cGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGCAGCCGGACCAACCGCAGCGACGGGAGCTACAGGGGAAGCGGGa                                                                     >  1:2853195/1‑140 (MQ=14)

                                                                    cGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGa                                                                     >  1:1714011/1‑140 (MQ=255)

                                                                     gggAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGAc                                                                    >  2:1362446/1‑140 (MQ=38)

                                                                     gggAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCACCCGGAGCGACAGGAGCGACCGGGGCAGCCGGACCTCCCGTAGCGACAGCTGCGTCCGCGGACGCCGGag                                                                    >  2:775204/1‑139 (MQ=11)

                                                                          ccACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGACGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGcc                                                               >  1:2148232/1‑140 (MQ=255)

                                                                            acaGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCgg                                                             <  2:1147482/140‑1 (MQ=255)

                                                                                  gCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGAc                                                       >  2:2300254/1‑140 (MQ=40)

                                                                                   cTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGACGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGACGCCGGAGCAGCCGGAGCGACa                                                      >  2:2096954/1‑140 (MQ=255)

                                                                                     aCTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAg                                                                                                                          >  1:868209/1‑70 (MQ=40)

                                                                                     aCTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTa                                                                                                                       >  1:638582/1‑73 (MQ=39)

                                                                                     aCTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGa                                                                                                         <  2:2007719/87‑1 (MQ=38)

                                                                                     aCTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAAGCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAgg                                                    >  2:1431020/1‑140 (MQ=255)

                                                                                     aCTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAgg                                                    >  1:1654433/1‑140 (MQ=255)

                                                                                     aCTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACAAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCACCCGGACCGACCgg                                                    >  1:433332/1‑140 (MQ=255)

                                                                                     aCTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCAACCGGGGCACCCGGACCAGCCGGACCGCCAGTAGCGCCCGGCGACACCGGACCAGACGGACCGCCAgg                                                    >  2:2374110/1‑140 (MQ=11)

                                                                                     aCTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCACCCGGAGCGACAGGAGCTa                                                                                                                       >  1:2606001/1‑73 (MQ=21)

                                                                                     aCTGGGGAAGCCGGACCAGACGGAGCGACAGTAGCTACCGGGGAAGCCGGACCAGCCGTAGCGACAGGAGCTACCGGGGAAGCCGCACCAACAGCACCGAAAGGAGATACCGCGGCAGCCTGAGCACCCGGAGCGCCAgg                                                    >  1:427010/1‑140 (MQ=14)

                                                                                     aCTGGGGAAGCCGGACCACCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGa                                                                                                >  1:72467/1‑96 (MQ=18)

                                                                                        ggggAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGCAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGACAAACAGGGGAAGCCGGACAAGCCGGAGCGACAgcacc                                                 >  2:1612623/1‑136 (MQ=14)

                                                                                          ggAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCgg                                                                                                                                     >  2:780153/1‑54 (MQ=35)

                                                                                          cgAAGCCGGCCCCGCCGGAGCGCCAGGAGCCCCCGGGGAAGCCGGAGCAGCCGGAGCGACAGGAGCGCCCGGGGAAGCCGGACCAACCGGAGCGACCGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTa                                               <  2:2562266/139‑1 (MQ=14)

                                                                                           gAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTAc                                              >  2:594331/1‑140 (MQ=255)

                                                                                           gAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTAc                                              <  2:1714011/140‑1 (MQ=255)

                                                                                            aaGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACAAGCCGGAGCGACAGGCGCGAcc                                             >  2:1284109/1‑140 (MQ=255)

                                                                                            aaGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGCACCAGCCGGAGCGACCGGAGCTACCGGGGAAGCGGGCCCAACCGGAGCGGCAGGAGCGACAGGGGAGGCCGGACCAGCCGGGGCGACAGGAGCGAcg                                             >  1:2018364/1‑139 (MQ=14)

                                                                                            aaGCCGGACCAGCCGGAGCGACAGGAGCAACCGGGGACCCCGGACAAGCCGGAGCCACAGGAGCTACCGGGGAAGCCGGAAAAACCTCAGCGACAGCAGCTACCGGGGACGCCGGACCAGCCGGAGCGACAGCAGCTAca                                             >  1:2783488/1‑139 (MQ=14)

                                                                                              gCCGGACCAGCCGGAGCGACCGGAGCGCCCGGGGCACCCGGACCACCCGGAGCGACAGGAGCTCCCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCgg                                           <  1:2108042/140‑1 (MQ=14)

                                                                                              gCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACCGGAGCTACAGGGGAAGCCGGACCAACCGGACCGACAGGAGCACCCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCgg                                           >  1:2834606/1‑140 (MQ=14)

                                                                                              gCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCgg                                           <  1:2352507/140‑1 (MQ=255)

                                                                                              gCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCgg                                           >  2:2419771/1‑140 (MQ=255)

                                                                                              gCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCACCCGGAGCGACACGAGCGACCGGGGCAGCCGGACCAACCGGAGCGACAGCACCGACCGCGGCAGCACGTCCACCCGCAGGGACAGGAGCGACggg                                           >  2:142915/1‑140 (MQ=11)

                                                                                              ccccgcccAGCCCGAGCGACAGGAGCGCCCGGGCCAGCCGGACCAGCCGGCGCGACTGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCgg                                           <  1:2797035/134‑1 (MQ=14)

                                                                                                   aCCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACAACCCGGAGCGACAGTAGCGACCGGGGAAGCCGGACCCACCGGAGCGACCGGAGCTCCCGGCGCCGCCGGACCAGCCGGAGCGCCCGGCGCTCCCGGGGacg                                      >  1:928924/1‑138 (MQ=14)

                                                                                                        ccGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGACGCAGGACCAACCGGAGCGACGGGAGCTACCGGTGAAGCAGGACCATCCGGAGCTACACGAGCGAACTGCGAAGCGGGa                                 >  1:283300/1‑140 (MQ=11)

                                                                                                        ccGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGa                                 >  2:2692542/1‑140 (MQ=255)

                                                                                                             gCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAAc                            <  1:1502530/140‑1 (MQ=255)

                                                                                                                  aGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGCGAAGCCGGCCCAGCCGGAGCGACAGGAGCGACCGGCGCCACCGGACCATCCGGAg                       >  2:1141269/1‑140 (MQ=11)

                                                                                                                      gCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGACGCCGGACCAGCCGGAGCGACAGGAGCGACCGGGGAAGCCGGACCAACCGGAGCGAc                   >  1:1139268/1‑140 (MQ=255)

                                                                                                                      gCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGAc                   <  1:594331/140‑1 (MQ=40)

                                                                                                                        tACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCgg                                  <  2:2728860/123‑1 (MQ=38)

                                                                                                                        tACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCgg                                  >  1:2728860/1‑123 (MQ=38)

                                                                                                                         actggggAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAg                                                                                      >  1:1704781/4‑70 (MQ=1)

                                                                                                                         aCCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACggg                <  2:1654433/140‑1 (MQ=255)

                                                                                                                         aCCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACggg                <  1:2419771/140‑1 (MQ=255)

                                                                                                                         aCCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGACGGATCGACAGCAGCGACCGGGGCAACAGGACAAGCCGGTGCGagcgg                >  2:48119/1‑136 (MQ=11)

                                                                                                                         aCCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACCGGGGCACCGGGCCCACGCGGTGCGACAGGAGGGACCGGGGCGCCCGTCCCAGCCGGCGCGACAGCAGCTAGCGGGGAAGCCGGCCCAACCGGcgcgggggg                >  2:312253/1‑135 (MQ=2)

                                                                                                                               gcaGCCGCACCAGCCGGAGCGACCGCAGCTACCGGCGACGCCCGACCAACCGGAGCCACAGGAGCTTCCGGGGAAGCCGGACCAGCCGCAGCGACCGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCcac          <  1:213859/138‑1 (MQ=14)

                                                                                                                               gacgCCGGCCCCGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCTACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCcac          <  1:577216/137‑1 (MQ=255)

                                                                                                                               gAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGAc                                                                    >  1:1883891/1‑82 (MQ=33)

                                                                                                                               gAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGAc                                                                    <  2:1883891/82‑1 (MQ=33)

                                                                                                                                aaGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCACCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGAACAACCGGAGCGACGGGAGCcaca         <  1:2096954/140‑1 (MQ=255)

                                                                                                                                aaGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCcaca         <  1:1362446/140‑1 (MQ=255)

                                                                                                                                aaGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCcaca         <  1:1081329/140‑1 (MQ=255)

                                                                                                                                  gcgggAGCACCCGGAGAGACAGGAGCTCCCGGGCAAGCCGGAGCAACCGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAgg       <  2:440072/137‑1 (MQ=14)

                                                                                                                                  gCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAgg       >  1:1792760/1‑140 (MQ=255)

                                                                                                                                  agcctaCCAGCCGGAGCCCCAGGAGCTGCCGGTCAGGGCGGACCAAACGGAGCCACAGGAGCTCCCGGCGAAGCCGGACCCGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCACCCGGAGCGACGGGAGCCACAgg       <  1:508746/135‑1 (MQ=14)

                                                                                                                                    cgcaCCAGCCGGAGACCCAGGAGCTACCGGGTATGCCGGCCCACCCGTAGCGACAGGACCTACGGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAgggg     <  1:1762560/137‑1 (MQ=14)

                                                                                                                                    cGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAgggg     >  1:1842091/1‑140 (MQ=255)

                                                                                                                                    cGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAgggg     <  1:1284109/140‑1 (MQ=255)

                                                                                                                                    cGGACCACCCGGAGCGACATGAGATCCCGGGGCACCCGGAGCAACCGGAGCGACAGGAGCTACAGGTGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAgggg     <  1:1973880/140‑1 (MQ=14)

                                                                                                                                     cccccAGCCGGAGCGACAGGAGCTAGCGGGCAACCCGGACCAACCGGAGAGACCGGCGCTCGCGGAGCAGAAGCACCCCCAGGAGCGACGGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGc    <  1:2115508/137‑1 (MQ=9)

                                                                                                                                       aCCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGCAGCCGGACCAGCCGGAGCGACAGGAGCGACCGGGGAAGCCGGACCCTCCGGAGCCACCGGAGCGCCAGGGGCtc  >  2:1855557/1‑139 (MQ=11)

                                                                                                                                       aCCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTa  <  1:2002092/140‑1 (MQ=255)

                                                                                                                                       aCCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTa  >  2:2002092/1‑140 (MQ=255)

GGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTA  >  NZ_CP034943/607499‑607773

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.