BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NZ_CP034943	= 317395	275 (1.130)	7 (0.030) +AAC	3/246	NT	2.5%	coding (1215/1254 nt)	opuAA	glycine/proline betaine ABC transporter ATP‑binding protein OpuAA
*	?	NZ_CP034943	317396 =	275 (1.130)	7 (0.030) +AAC	3/246	NT	2.5%	coding (1216/1254 nt)	opuAA	glycine/proline betaine ABC transporter ATP‑binding protein OpuAA
Rejected: Frequency below/above cutoff threshold.

Only 100 of 304 total aligned reads displayed.

AGATTTTTGACGTTGTTTCTGACGCGAATATTCCAATTGCGGTTGTAGATGAGAAGCAGAGAATGAAAGGGATTGTCGTAAAAGGCGCGCTAATTGGCGCACTCGCCGGCAATAATGATTACATTAATGTTGAAGGCACTGAACAAACACAAGATCCTTCTGTACAGGAGGTGAAGTAAGATGGATAGACTGCCTAGAATACCTTTAGCAGATATGATTGACCGTTTTGTTGACTGGATTACGATGACGTTTGGCGGATTCTTTGATGGAATCGCAAAC  >  NZ_CP034943/317256‑317534

    ttttGACGTTGTTTCTGACGCGAATATTCCAATTGCGGTTGTAGATGAGAAGCAGAGAATGAAAGGGATTGTCGTAAAAGGCGCGCTAATTGGCGCACTCGCCGGCAATAATGATTACATTAATGTTGAAGGCACTGaac                                                                                                                                         <  2:3570973/140‑1 (MQ=255)

     tttGACGTTGTTTCTGACGCGAATATTCCAATTGCGGTTGTAGATGAGAAGCAGAGAATGAAAGGGATTGTCGTAAAAGGCGCGCTAATTGGCGCACTCGCCGGCAATAATGATTACATTAATGTTGAAGGCACTGaaca                                                                                                                                        <  1:1672747/140‑1 (MQ=255)

      ttGACGTTGTTTCTGACGCGAATATTCCAATTGCGGTTGTAGATGAGAAGCAGAGAATGAAAGGGATTGTCGTAAAAGGCGCGCTAATTGGCGCACTCGCCGGCAATAATGATTACATTAATGTTGAAGGCACTGaacaa                                                                                                                                       <  1:1564180/140‑1 (MQ=255)

            ttgttTCTGACGCGAATATTCCAATTGCGGTTGTAGATGAGAAGCAGAGAATGAAAGGGATTGTCGTAAAAGGCGCGCTAATTGGCGCACTCGCCGGCAATAATGATTACATTAATGTTGAAGGCACTGAACAAACACaa                                                                                                                                 >  1:1207944/1‑140 (MQ=255)

              gttTCTGACGCGAATATTCCAATTGCGGTTGTAGATGAGAAGCAGAGAATGAAAGGGATTGTCGTAAAAGGCGCGCTAATTGGCGCACTCGCCGGCAATAATGATTACATTAATGTTGAAGGCACTGAACAAACACAAGa                                                                                                                               <  1:4020955/140‑1 (MQ=255)

              gttTCTGACGCGAATATTCCAATTGCGGTTGTAGATGAGAAGCAGAGAATGAAAGGGATTGTCGTAAAAGGCGCGCTAATTGGCGCACTCGCCGGCAATAATGATTACATTAATGTTGAAGGCACTGAACAAACACAAGa                                                                                                                               <  1:1452050/140‑1 (MQ=255)

              gttTCTGACGCGAATATTCCAATTGCGGTTGTAGATGAGAAGCAGAGAATGAAAGGGATTGTCGTAAAAGGCGCGCTAATTGGCGCACTCGCCGGCAATAATGATTACATTAATGTTGAAGGCACTGAACAAACACAAGa                                                                                                                               <  1:179061/140‑1 (MQ=255)

              gttTCTGACGCGAATAGTCCAATTGCGTTTGTAGATGAGAAGCAGAGAATGAAAGGGATTGTCGTAAAAGGCGCGCTAATTGGCGCACTCGCCGGCAATAATGATTACATTAATGTTGAAGGCACTGAACAAACACAAGa                                                                                                                               <  2:37777/140‑1 (MQ=255)

                ttCTGACGCGAATATTCCAATTGCGGTTGTAGATGAGAAGCAGAGAATGAAAGGGATTGTCGTAAAAGGCGCGCTAATTGGCGCACTCGCCGGCAATAATGATTACATTAATGTTGAAGGCACTGAACAAACACAAGATc                                                                                                                             <  2:951153/140‑1 (MQ=255)

                 tCTGACGCGAATATTCCAATTGCGGTTGTAGATGAGAAGCAGAGAATGAAAGGGATTGTCGTAAAAGGCGCGCTAATTGGCGCACTCGCCGGCAATAATGATTACATTAATGTTGAAGGCACTGAACAAACACAAGATcc                                                                                                                            <  1:3998353/140‑1 (MQ=255)

                 tCTGACGCGAATATTCCAATTGCGGTTGTAGATGAGAAGCAGAGAATGAAAGGGATTGTCGTAAAAGGCGCGCTAATTGGCGCACTCGCCGGCAATAATGATTACATTAATGTTGAAGGCACTGAACAAACACAAGATcc                                                                                                                            <  2:2086941/140‑1 (MQ=255)

                   tGACGCGAATATTCCAATTGCTGTTGTAGATGAGAAGCAGAGAATGAAAGGGATTGTCGTAAAAGGCGCGCTAATTGGCGCACTCGCCGGCAATAATGATTACATTAATGTTGAAGGCACTGAACAAACACAAGATCCtt                                                                                                                          <  1:239106/140‑1 (MQ=255)

                   tGACGCGAATATTCCAATTGCGGTTGTAGATGAGAAGCAGAGAATGAAAGGGATTGTCGTAAAAGGCGCGCTAATTGGCGCACTCGCCGGCAATAATGATTACATTAATGTTGAAGGCACTGAACAAACACAAGATCCtt                                                                                                                          <  2:4018267/140‑1 (MQ=255)

                    gccgcgAATATGCCAATTGCGGTTCTAGATGAGAAGCAGAGAATGAAAGGGATTGTCGTAACAGGCGCGCTAAGTGGCGCACTCGCCGGCAATAATGATTACATTAATGTTGAAGGCACTGAACAAACACAAGATCCTTc                                                                                                                         <  2:649980/138‑1 (MQ=255)

                    gACGCGAATATTCGATTTGGGGTTGTAGATGAGAAGCAGAGAATGAAAGGGATTGTCTTAAAAGGCGCGCTAATTGGCGCACTCGGCGGCAATAATGATTACATTAATGTTGAAGGCACTGAACAAACACAAGATCCTTc                                                                                                                         <  2:2881470/140‑1 (MQ=255)

                    gACGCGAATATTCCAATTGCGGTTGTAGATGAGAAGCAGAGAATGAAAGGGATTGTCGTAAAAGGCGCGCTAATTGGCGCACTCGCCGGCAATAATGATTACATTAATGTTGAAGGCACTGAACAAACACAAGATCCTTc                                                                                                                         <  2:666488/140‑1 (MQ=255)

                    gACGCGAATATTCCAATTGCGGTTGTAGATGAGAAGCAGAGAATGAAAGGGATTGTCGTAAAAGGCGCGCTAATTGGCGCACTCGCCGGCAATAATGATTACATTAATGTTGAAGGCACTGAACAAACACAAGATCCTTc                                                                                                                         <  2:1185396/140‑1 (MQ=255)

                    gACGCGAATATTCCAATTGCGGTTGTAGATGAGAAGCAGAGAATGAAAGGGATTGTCGTAAAAGGCGCGCTAATTGGCGCACTCGCCGGCAATAATGATTACATTAATGTTGAAGGCACTGAACAAACACAAGATCCTTc                                                                                                                         <  2:3807017/140‑1 (MQ=255)

                    gACGCGAATATTCCAATTGCGGTTGTAGATGAGAAGCAGAGAATGAAAGGGATTGTCGTAAAAGGCGCGCTAATTGGCGCACTCGCCGGCAATAATGATTACATTAATGTTGAAGGCACTGAACAAACACAAGATCCTTc                                                                                                                         <  2:844048/140‑1 (MQ=255)

                           atatTCCAATTGCGGTTGTAGATGACAAGCAGAGACTGAAAGGGATAGTCGTAAAAGGCGCGCTACTGGGCGCACTCGCCGGCAATACTGATTACATTAATGTTGAAGGCACTGAACAAACACAAGATCCTTCTGTACag                                                                                                                  <  1:3746068/140‑1 (MQ=255)

                              ttCCAATTGCGGTTGTAGATGAGAAGCAGAGAATGAAAGGGATTGTCGTAAAAGGCGCGCTAATTGGCGCACTCGCCGGCAATAATGATTACATTAATGTTGAAGGCACTGAACAAACACAAGATCCTTCTGTACaggag                                                                                                               <  1:801084/140‑1 (MQ=255)

                               tCCAATTGCGGTTGTAGATGAGAAGCAGAGAATGAAAGGGATTGTCGTAAAAGGCGCGCTAATTGGCGCACTCGCCGGCAATAATGATTACATTAATGTTGAAGGCACTGAACAAACACAAGATCCTTCTGTACaggagg                                                                                                              >  1:847836/1‑140 (MQ=255)

                               tCCAATTGCGGTTGTAGATGAGAAGCAGAGAATGAAAGGGATTGTCGTAAAAGGCGCGCTAAGTGGCGCACTCGCCGGCAATAATGATTACATTAATGTTGAAGGCACTGAACAAACACAAGATCCTTCTGTACaggagg                                                                                                              <  2:1620804/140‑1 (MQ=255)

                               tCCAATTGCGGTTGTAGATGAGAAGCAGAGAATGAAAGGGAGTGTCGTAAAAGGCTCGCTAATTGGCGCACTCGCCGGCAATAATGATTACATTAATGTTGAAGGCACTGAACAAACACAAGATCCTTCTGTACaggagg                                                                                                              <  2:1826649/140‑1 (MQ=255)

                                 cAATTTCGGTTCTAGATGAGAAGCAGAGAATCAAAGGGATTGTCGTAAAATGAGCGCTAATTGGCGCACTCGCCGCAAATAATGAGTACATTAATCTTGAAGGCACTCAACAAACAAAAGATCCTTCTGTACACGAtgtg                                                                                                            >  2:2587713/1‑140 (MQ=255)

                                 cAATTGCGGTTGTAGATGAGTAGCAGAGAATGAAAGGGATTGTCGTAAAAGGCGCGCTAATTGGCGCACTCGCCGGCAATAATGATTACATTAATGTTGAAGGCACTGAACAAACACAAGATCCTTCTGTACAGGAGGTg                                                                                                            <  1:3554675/140‑1 (MQ=255)

                                 cAATTGCGGTTGTAGATGAGAAGCAGAGAATGAAAGGGATTGTCGTAAAAGGCGCGCTAATTGGCGCACTCGCCGGCAATAATGATTACATTAATGTTGAAGGCACTGAACAAACACAAGATCCTTCTGTACAGGAGGTg                                                                                                            <  2:1378111/140‑1 (MQ=255)

                                   aTTGCGGTTGTAGATGAGAAGCAGAGAATGAAAGGGATTGTCGTAAAAGGCGCGCTAATTGGCGCACTCGCCGGCAATAATGATTACATTAATGTTGAAGGCACTGAACAAACACAAGATCCTTCTGTACAGGAGGTGaa                                                                                                          >  1:2657376/1‑140 (MQ=255)

                                   aTTGCGGTTGTAGATGAGAAGCAGAGAATGAAAGGGATTGTCGTAAAAGGCGCGCTAATTGGCGCACTCGCCGGCAATAATGATTACATTAATGTTGAAGGCACTGAACAAACACAAGATCCTTCTGTACAGGAGGTGaa                                                                                                          <  2:336276/140‑1 (MQ=255)

                                   aTTGCGGTTGTAGATGAGAAGCAGAGAATGAAAGGGATTGTCGTAAAAGGCGCGCTAATTGGCGCACTCGCCGGCAATAATGATTACATTAATGTTGAAGGCACTGAACAAACACAAGATCCTTCTGTACAGGAGGTGaa                                                                                                          >  1:3243737/1‑140 (MQ=255)

                                   aTTGCGGTTGTAGATGAGAAGCAGAGAATGAAAGGGATTGTCGTAAAAGGCGCGCTAATTGGCGCACTCGCCGGCAATAATGATTACATTAATGTTGAAGGCACTGAACAAACACAAGATCCTTCTGTACAGGAGGTGaa                                                                                                          >  1:1934152/1‑140 (MQ=255)

                                     tGCGGTTGTAGATGAGAAGCAGAGAATGAAAGGGATTGTCGTAAAAGGCGCGCTAATTGGCGCACTCGCCGGCAATAATGATTACATTAATGTTGAAGGCACTGAACAAACACAAGATCCTTCTGTACAGGAGGTGAAGt                                                                                                        <  2:3280891/140‑1 (MQ=255)

                                       cgcttGTAGATGAGAAGCAGAGAATGAAAGGGATTGTCGTAAAAGGCGCGCGAATTGGCGCACTCGCCGGCAATAATGATTACATTAATGTTGAAGGCACTGAACAAACACAAGATCCTTCTGTACAGGAGGTGAAGTaa                                                                                                      <  2:2482801/137‑1 (MQ=255)

                                       cGGTTGTAGATGAGAAGCAGAGAATGAAAGGGTTTGTCGTAAAAGGCGCGCTAATGGGCGCACTCGCCGGCAATAATGATTACATTAATGTTGAAGGCACTGAACAAACACAAGATCCTTCTGTACAGGAGGTGAAGTaa                                                                                                      <  2:3644182/140‑1 (MQ=255)

                                       cGGTTGTAGATGAGAAGCAGAGAATGAAAGGGATTGTCGTAAAAGGCGCGCTAATTGGCGCACTCGCCGGCAATAATGATTACATTAATGTTGAAGGCACTGAACAAACACAAGATCCTTCTGTACAGGAGGTGAAGTaa                                                                                                      <  1:2439167/140‑1 (MQ=255)

                                       cGGTTGTAGATGAGAAGCAGAGAATGAAAGGGATTGTCGTAAAAGGCGCGCTAATTGGCGCACTCGCCGGCAATAATGATTACATTAATGTTGAAGGCACTGAACAAACACAAGATCCTTCTGTACAGGAGGTGAAGTaa                                                                                                      <  2:1741848/140‑1 (MQ=255)

                                       cGGTTGTAGATGAGAAGCAGAGAATGAAAGGGATTGTCGTAAAAGGCGCGCTAATTGGCGCACTCGCCGGCAATAATGATTACATTAATGTTGAAGGCACTGAACAAACACAAGATCCTTCTGTACAGGAGGTGAAGTaa                                                                                                      <  2:3829121/140‑1 (MQ=255)

                                       cGGTTGTAGATGAGAAGCAGAGAATGAAAGGGATTGTCGTAAAAGGCGCGCTAATTGGCGCACTCGCCGGCAATAATGATTACATTAATGTTGAAGGCACTGAACAAACACAAGATCCTTCTGTACAGGAGGTGAACTaa                                                                                                      >  2:276775/1‑140 (MQ=255)

                                       cGGTTGTAGATGAGAAGCAGAGAATGAAAGGGATTGTCGTAAAAGGCGCGCGAATTGGCGCACTCGCCGGCAATAATGATTACATTAATGTTGAAGGCACTGAACAAACACAAGATCCTTCTGTACAGGAGGTGAAGTaa                                                                                                      <  1:2923555/140‑1 (MQ=255)

                                         gTTGTAGATGAGAAGCAGAGACTGAAAGGGATTGTCGTAAAAGGCGCGCTAATTGGCGCACTCGCCGGCAATACTGATTACATTAATGTTGAAGGCACTGAACAAACACAAGATCCTTCTGTACAGGAGGTGAAGTAAGa                                                                                                    >  2:1320914/1‑140 (MQ=255)

                                         gTTGTAGATGAGAAGCAGAGAATGAAAGGGATTGTCGTAAAAGGCGCGCTAATTGGCGCACTCGCCGGCAATAATGATTACATTAATGTTGAAGGCACTGAACAAACACAAGATCCTTCTGTACAGGAGGTGAAGTAAGa                                                                                                    >  1:1364846/1‑140 (MQ=255)

                                            gTAGATGAGAAGCAGAGAATGAAAGGGATTGTCGTAAAAGGCGCGCTAATTGGCGCACTCGCCGGCAATAATGATTACATTAATGTTGAAGGCACTGAACAAACACAAGATCCTTCTGTACag                                                                                                                  <  1:2971309/123‑1 (MQ=255)

                                                 tGAGAAGCAGAGAATGAAAGGGATTGTCGTAAAAGGCGCGCTACTTGGCGCACTCGCCGGCAATAATGATTACATTAATGTTGAAGGCACTGAACAAACACAAGATCCTTCTGTACAGGAGGTGAAGTAAGATGGATAGa                                                                                            <  1:3892545/140‑1 (MQ=255)

                                                 tGAGAAGCAGAGAATGAAAGGGATTGTCGTAAAAGGCGCGCTAATTGGCGCACTCGCCGGCAATAATGATTACATTAATGTTGAAGGCACTGAACAAACACAAGATCCTTCTGTACAGGAGGTGAAGTAAGATGGATAGa                                                                                            <  1:3795290/140‑1 (MQ=255)

                                                 tGAGAAGCAGAGAATGAAAGGGATTGTCGTAAAAGGCGCGCTAATTGGCGCACTCGCCGGCAATAATGATTACATTAATGTTGAAGGCACTGAACAAACACAAGATCCTTCTGTACAGGAGGTGAAGTAAGATGGATAGa                                                                                            <  1:3113185/140‑1 (MQ=255)

                                                 tGAGAAGCAGAGAATGAAAGGGATTGTCGTAAAAGGCGCGCTAATTGGCGCACTCGCCGGCAATAATGATTACATTAATGTTGAAGGCACTGAACAAACACAAGATCCTTCTGTACAGGAGGTGAAGTAAGATGGATAGa                                                                                            <  1:674092/140‑1 (MQ=255)

                                                 tGAGAAGCAGAGAATGAAAGGGATTGTCGTAAAAGGCGCGCTAAGTGGCGCACTCGCCGGCAATAATGATTACATTAATGTTGAAGGCACTGAACAAACACAAGATCCTTCTGTACAGGAGGTGAAGTAAGATGGATAGa                                                                                            <  1:3083861/140‑1 (MQ=255)

                                                 tGAGAAGCAGAGAATGAAAGGGATTGTCGGAAAAGGCGCGCTATTTGGCGCACTCGCCGGCAATAATGATTACATTAATGTTGAAGGCACTGAACAAACACAAGATCCTTCTGTACAGGAGGTGAAGTAAGATGGATAGa                                                                                            <  2:601345/140‑1 (MQ=255)

                                                 tGAGAAGCAGAGAATGAAAGGGAGTGTCGTAAAAGGCGCGCTAATGGGCGCACTCGCCGGCAATAATGATTACATTAATGTTGAAGGCACTGAACAAACACAAGATCCTTCTGTACAGGAGGTGAAGTAAGATGGATAGa                                                                                            <  2:621424/140‑1 (MQ=255)

                                                 agagaAGCAGAGAATGAAAGGGATTGTCGTAAAAGGCGCGCTAAGTGGCGCACTCGCCGGCAATAATGATTACATTAATGTTGAAGGCACTGAACAAACACAAGATCCTTCTGTACAGGAGGTGAAGTAAGATGGATAGa                                                                                            <  2:2514721/139‑1 (MQ=255)

                                                  gagaAGCAGAGAATGAAAGGGATTGTCGTAAAAGGCGCGCTAATTGGCGCACTCGCCGGCAATAATGATTACATTAATGTTGAAGGCACTGAACAATCACAAGATCCTTCTGTACAGGAGGTGAAGTAAGATGGATAGaa                                                                                           >  2:1653699/1‑139 (MQ=255)

                                                    gaAGCAGAGAATGAAAGGGATTGTCGTAAAAGGCGCGCTAATTGGCGCACTCGCCGGCAATAATGATTACATTAATGTTGAAGGCACTGAACAAACACAAGATCCTTCTGTACAGGAGGTGAAGTAAGATGGATAGACTg                                                                                         <  1:1404686/140‑1 (MQ=255)

                                                     tatcAGATAATGAAAGGTATTGTAGTAAAAGGCGCGCTAATTGGCGCACTCGCAGGCAATAATGATTACATTTATGTTGAAGGCACTGATCAAACACAATATCCTTCTGTACAGGAGGTGAAGTAAGATGGATAGACTGc                                                                                        <  1:1804150/137‑1 (MQ=255)

                                                     aaGCAGAGAATGAAAGGGATTGTCGTAAAAGGCGCGCTAATTGGCGCACTCGCCGGCAATAATGATTACATTAATGTTGAAGGCACTGAACAAACACAAGATCCTTCTGTACAGGAGGTGAAGTAAGATGGATAGACTGc                                                                                        <  1:743746/140‑1 (MQ=255)

                                                          gagaATGAAAGGGATTGTCGTAAAAGGCGCGCTAATTGGCGCACTCGCCGGCAATAATGATTACATTAATGTTGAAGGCACTGAACAAACACAAGATCCTTCTGTACAGGAGGTGAAGTAAGATGGATAGACTGCCTAGa                                                                                   <  1:614968/140‑1 (MQ=255)

                                                             aaTGAAAGGAATTGTCGTAAGAGGCGCGCTGATTGGCGCACTTGCCGGCAATAACGAGTATATCAATGCTGAAGGCACTaacgaacaaacacaagatccttctgcacacgaggtgaaataagatggatagactgcctaga                                                                                <  2:540104‑M1/140‑62 (MQ=255)

                                                               tGAAAGTGATTGTCGTAAAAGGCGCGCTCATTGGCTCACTCGCCGGCAATAATGATTTCATTATTGTTGAAGGCACTGATCAAACACAAGATCCTTCTGTACAGGAGGTGAAGTAAGATGGATAGACTGACTAGAATAcc                                                                              <  2:3260167/140‑1 (MQ=255)

                                                               tGAAAGGGATTGTCGTAAAAGGCGCGCTAATTGGCGCACTCGCCGGCAATAATGATTACATTAATGTTGAAGGCACTGAACAAACACAAGATCCTTCTGTACAGGAGGTGAAGTAAGATGGATAGACTGCCTAGAATAcc                                                                              >  2:750380/1‑140 (MQ=255)

                                                                gAAAGGGATTGTCGTAAAAGGCGCGCTAATTGGCGCACTCGCCGGCAATAATGATTACATTAATGTTGAAGGCACTGAACAAACACAAGATCCTTCTGTACAGGAGGTGAAGTAAGATGGATAGACTGCCTAGAATACCt                                                                             <  1:1489316/140‑1 (MQ=255)

                                                                   aGGGATTGTCGTAAAAGGCGCGCTAATTGGCGCACTCGCCGGCAATAATGATTACATTAATGTTGAAGGCACTGAACAAACACAAGATCCTTCTGTACAGGAGGTGAAGTAAGATGGATAGACTGCCTAGAATACCTTTa                                                                          <  2:2975323/140‑1 (MQ=255)

                                                                     ggATTTTCGTAAAAGGCGCGCTAATTGGCGCACTCGCCGGCAATAATGATTACATTAATGTTGAAGGCACTGAACAAACACAAGATCCTTCTGTACAGGAGGTGAAGTAAGATGGATAGACTGCCTAGAATACCTTTAGc                                                                        <  1:955853/140‑1 (MQ=255)

                                                                     ggATTGTCGTAAAAGGCGCGCTAATTGGCGCACTCGCCGGCAATAATGATTACATTAATGTTGAAGGCACTGAACAAACACAAGATCCTTCTGTACAGGAGGTGAAGTAAGATGGATAGa                                                                                            >  1:2824115/1‑120 (MQ=255)

                                                                       aTTGTCGTAAAAGGCGCGCTAATTGGCGCACTCGCCGGCAATAATGATTACATTAATGTTGAAGGCACTGAACAAACACAAGATCCTTCTGTACAGGAGGTGaa                                                                                                          <  2:1217091/104‑1 (MQ=255)

                                                                       aTTGTCGTAAAAGGCGCGCTAATTGGCGCACTCGCCGGCAATAATGATTACATTAATGTTGAAGGCACTGAACAAACACAAGATCCTTCTGTACAGGAGGTGAAGTAAGATGGATAGACTGCCTAGAATACCTTTAGCAg                                                                      >  1:2765062/1‑140 (MQ=255)

                                                                       aTTGTCGTAAAAGGCGCGCTAATTGGCGCACTCGCCGGCAATAATGATTACATTAATGTTGAAGGCACTGAACAAACACAAGATCCTTCTGTACAGGAGGTGAAGTAAGATGGATAGACTGCCTAGAATACCTTTAGCAg                                                                      >  1:3903103/1‑140 (MQ=255)

                                                                       aTTGTCGTAAAAGGCGCGCTAATTGGCGCACTCGCCGGCAATAATGATTACATTAATGTTGAAGGCACTGAACAAACACAAGATCCTTCTGTACAGGAGGTGAAGTAAGATGGATAGACTGCCTAGAATACCTTTAGCAg                                                                      >  2:1002772/1‑140 (MQ=255)

                                                                        ttGTCGTAAAAGGCGCGCTAATTGGCGCACTCGCCGGCAATAATGATTACATTAATGTTGAAGGCACTGAACAAACACAAGATCCTTCTGTACAGGAGGTGAAGTAAGATGGATAGACTGCCTAGAATACCTTTAGCAGa                                                                     <  1:2592050/140‑1 (MQ=255)

                                                                        ttGTCGTAAAAGGCGCGCTAATTGGCGCACTCGCCGGCAATAATGATTACATTAATGTTGAAGGCACTGAACAAACACAAGATCCTTCTGTACAGGAGGTGAAGTAAGATGGATAGACTGCCTAGAATACCTTTAGCAGa                                                                     <  1:1767381/140‑1 (MQ=255)

                                                                         tGTCGTAAAAGGCGCGCTAATTGGCGCACTCGCCGGCAATAATGATTACATTAATGTTGAAGGCACTGAACAAACACAAGATCCTTCTGTACAGGAGGTGAAGTAAGATGGATAGACTGCCTAGAATAcc                                                                              <  2:3071153/130‑1 (MQ=255)

                                                                              gaaaaCGCGCGCGAACTGGCGCACTCGCCGGCAATAATGCTGACATTAATGTTGAAGGCACTGAACAAACACAAGATCCTTCTGTACAGGAGGTGAAGTCAGATGGATAGACTGCCTAGAATACCTTTAGCAGATATGAt                                                               <  1:3310591/139‑1 (MQ=255)

                                                                                aaaGGCGCGCTAATTGGCGCACTCGCCGGCAATAATGATTACATTAATGTTGAAGGCACTGAACAAACACAAGATCCTTCTGTACAGGAGGTGAAGTAAGATGGATAGACTGCCTAGAATACCTTTAGCAGATATGATTg                                                             <  1:2241330/140‑1 (MQ=255)

                                                                                     cgcgcTAATTGGCGCACTCGCCGGCAATAATGATTACATTAATGTTGAAGGCACTGAACAAACACAAGATCCTTCTGTACAGGAGGTGAAGTAAGATGGATAGACTGCCTAGAATACCTTTAGCAGATATGATTGACCGt                                                        >  1:110424/1‑140 (MQ=255)

                                                                                     cgcgcTAATTGGCGCACTAGCCGGAAATAATGATTACATTAATGTTGAAGGCACTGAACAAACACAAGATCCTTCTGTACAGGAGGTGAAGTAAGATGGATAGACTGCCTAGAATACCTTTAGCAGATATGATTGACCGt                                                        >  2:488312/1‑140 (MQ=255)

                                                                                              tGGCGCACTCGCCGGCAATAATGATTACATTAATGTTGAAGGCACTGAACAAACACAAGATCCTTCTGTACAGGAGGTGAAGTAAGATGGATAGACTGCCTAGAATACCTTTAGCAGATATGATTGACCGTTTTGTTGAc                                               <  1:1323247/140‑1 (MQ=255)

                                                                                              tGGCGCACTCGCCGGCAATAATGATTACATTAATGTTGAAGGCACTGAACAAACACAAGATCCTTCTGTACAGGAGGTGAAGTAAGATGGATAGACTGCCTAGAATACCTTTAGCAGATATGATTGACCGTTTTGTTGAc                                               <  2:3903103/140‑1 (MQ=255)

                                                                                                   cACTCGCCGGCAATAATGATTACATTAATGTTGAAGGCACTGAACAAACACAAGCTCCTTCTGTACAGGAGGTGAAGTAAGATGGATAGACTGCCTAGAATACCTTTAGCAGATATGATTGACCGTTTTGTTGACTGGAt                                          <  2:4027130/140‑1 (MQ=255)

                                                                                                   cACTCGCCGGCAATAATGATTACATTAATGTTGAAGGCACTGAACAAACACAAGATCCTTCTGTACAGGAGGTGAAGTAAGATGGATAGACTGCCTAGAATACCTTTAGCAGATATGATTGACCGTTTTGTTGACTGGAt                                          <  2:1886032/140‑1 (MQ=255)

                                                                                                   cACTCGCCGGCAATAATGATTACATTAATGTTGAAGGCACTGAACAAACACAAGATCCTTCTGTACAGGAGGTGAAGTAAGATGGATAGACTGCCTAGAATACCTTTAGCAGATATGATTGACCGTTTTGTTGACTGGAt                                          <  2:145616/140‑1 (MQ=255)

                                                                                                   cACTCGCCGGCAATAATGATTACATTAATGTTGAAGGCACTGAACAAACACAAGATCCTTCTGTACAGGAGGTGAAGTAAGATGGATAGACTGCCTAGAATACCTTTAGCAGATATGATTGACCGTTTTGTTGACTGGAt                                          <  2:2360351/140‑1 (MQ=255)

                                                                                                    aCTCGCCGGCAATAATGATTACATTAATGTTGAAGGCACTGAACAAACACAAGATCCTTCTGTACAGGAGGTGAAGTAAGATGGATAGACTGCCTAGAATACCTTTAGCAGATATGATTGACCGTTTTGTTGAGTGGAtt                                         >  2:3758756/1‑140 (MQ=255)

                                                                                                      tCGCCGGCAATAATGATTACATTAATGTTGAAGGCACTGAACAAACACAAGATCCTTCTGTACAGGAGGTGAAGTAAGATGGATAGACTGCCTAGAATACCTTTa                                                                          <  1:1627455/105‑1 (MQ=255)

                                                                                                         ccGGCAATAATGATTACATTAATGTTGAAGGCACTGAACAAACACAAGATCCTTCTGTACAGGAGGTGAAGTAAGATGGATAGACTGCCTAGAATACCTTTAGCAGATATGATTGACCGTTTTGTTGACTGGATTACGAt                                    <  2:2291720/140‑1 (MQ=255)

                                                                                                                taatGATTACATTAATGTTGAAGGCACTGAACAAACACAAGATCCTTCTGTACAGGAGGTGAAGTAAGATGGATAGACTGCCTAGAATACCTTTAGCAGATATGATTGACCGTTTTGTTGACTGGATTACGATGACGttt                             >  2:2149229/1‑140 (MQ=255)

                                                                                                                       tatatcaatgctgaAGGCACTaacgaacaaacacaagatccttctgcacaggaggtgaaataagatggatagactgcctagaatacctttagcagatattattgaccgttttgttgactggattacgatgacgtttggcg                      >  2:1138524‑M1/7‑21 (MQ=255)

                                                                                                                       aaCATTAATGTTGAAGTCACTGAAAAAAAACAAGATCCTTCTGTACAGTAGGTTAAGTAAGATGGATAGACTCCCAAGAATACCTTTAGCAGATATGATTGACAGTTTTGTTGACTGGATTAAGATGACGTTTGGCGGAt                      >  2:2225604/2‑140 (MQ=255)

                                                                                                                           ttAATGTTGAAGGCACTGAACAAACACAAGATCCTTCTGTACAGGAGGTGAAGTAAGATGGATAGACTGCCTAGAATACCTTTAGCAGATATGATTGACCGTTTTGTTGACTGGATTACGATGACGTTTGGCGGATTCtt                  >  1:484254/1‑140 (MQ=255)

                                                                                                                              aTGTTGAAGGCACTGAACAAACACAAGATCCTTCTGTACAGGAGGTGAAGTAAGATGGATAGACTGCCTAGAATACCTTTAGCTGATATGATTGAACGTTTTGTTGACTGGATTACGATGACGTTTGGCGGATTCTTTGa               >  2:3131777/1‑140 (MQ=255)

                                                                                                                               tgctgaaGGCACTaacgaacaaacacaagatccttctgcacaggaggtgaaataagatggatagactgcctagaatacctttagcagatattattga                                                         >  2:1979860‑M1/4‑13 (MQ=255)

                                                                                                                               tgctgaaGGCACTaacgaacaaacacaagatccttctgcacaggaggtgaaataagatggatagactgcctagaatacctttagcagatattattga                                                         <  1:1979860‑M1/94‑85 (MQ=255)

                                                                                                                                 tttaaGGCACTGAAAAAACTCCAGATCCTTCTGTACCGGAGGTGAAGTAAGATTGATAGTCTGCCTAGAATACCTTTAGCAGATATGATTGACCGTTTTGTTGACTGGATTACGATGACGTTTGGCGGATTCTTTGATgg            <  2:153755/137‑1 (MQ=255)

                                                                                                                                    aaGGCACTGAACAAACACAAGATCCTTCTGTACAGGAGGTGAAGTACGAGGGATAGACTGCCTAGAATACCTTTAGCAGATATGATTGACCGTTTTGTTGACTGGATTACGATGACGTTTGGCGGATTCTTTGATGGCAt         >  2:3453398/1‑140 (MQ=255)

                                                                                                                                    aaGGCACTGAACAAACACAAGATCCTTCTGTACAGGAGGTGAAGTAAGATGGATAGACTGCCTAGAATACCTTTAGCAGATATGATTGACCGTTTTGTTGACTGGATTACGATGACGTTTGGCGGATTCTTTGATGGAAt         >  2:3707843/1‑140 (MQ=255)

                                                                                                                                    aaGGCACTGAACAAACACAAGATCCTTCTGTACAGGAGGTGAAGTAAGATGGATAGACTGCCTAGAATACCTTTAGCAGATATGATTGACCGTTTTGTTGACTGGATTACGATGACGTTTGGCGGATTCTTTGATGGAAt         >  1:3209868/1‑140 (MQ=255)

                                                                                                                                    aaGGCACTGAACAAACACAAGATCCTTCTGTACAGGAGGTGAAGTAAGATGGATAGACTGCCTAGAATACCTTTAGCAGATATGATTGACCGTTTTGTTGACTGGATTACGATGACGTTTGGCGGATTCTTTGATGGAAt         >  1:3039608/1‑140 (MQ=255)

                                                                                                                                    aaGGCACTGAACAAACACAAGATCCTTCTGTACAGGAGGTGAAGTAAGATGGATAGACTGCCTAGAATACCTTTAGCAGATATGATTGACCGTTTTGTTGACTGGATTACGATGACGTTTGGCGGATTCTTTGATGGAAt         >  1:2747206/1‑140 (MQ=255)

                                                                                                                                    aaGGCACTGAACAAACACAAGATCCTTCTGTACAGGAGGTGAAGTAAGATGGATAGACTGCCTAGAATACCTTTAGCAGATATGATTGACCGTTTTGTTGACTGGATTACGATGACGTTTGGCGGATTCTTTGATGGAAt         >  1:2105569/1‑140 (MQ=255)

                                                                                                                                    aaGGCACTGAACAAACACAAGATCCTTCTGTACAGGAGGTGAAGTAAGATGGATAGACTGCCTAGAATACCTTTAGCAGATATGATTGACCGTTTTGTTGACTGGATTACGATGACGTTTGGCGGATTCTTTGATGGAAt         >  2:3001907/1‑140 (MQ=255)

                                                                                                                                    aaGGCACTGAACAAACACAAGATCCTTCTGTACAGGAGGTGAAGTAAGATGGATAGACTGCCTAGAATACCTTTAGCAGATATGATTGACCGTTTTGTTGACTGGATTACGATGACGTTTGGCGGAGTCTTTGATGGAAt         >  1:1149234/1‑140 (MQ=255)

                                                                                                                                         aCTGAACAAACACAAGATCCTTCTGTACAGGAGGTGAAGTAAGATGGATAGACTGCCTAGAATACCTTTAGCAGATATGATTGACCGTTTTGTTGACTGGATTACGATGACGTTTGGCGGATTCTTTGATGGAATCGCaa    >  1:1012440/1‑140 (MQ=255)

                                                                                                                                           tGAACAAACACAAGATCCTTCTGTACAGGAGGTGAAGTAAGATGGATAGACTGCCTAGAATACCTTTCGCAGATATGATTGACCGTTTTGTTGACTGGATTACGATGACGTTTGGCGGAGTCTTTGATGGAATCGCAAAc  >  1:2183841/1‑140 (MQ=255)

AGATTTTTGACGTTGTTTCTGACGCGAATATTCCAATTGCGGTTGTAGATGAGAAGCAGAGAATGAAAGGGATTGTCGTAAAAGGCGCGCTAATTGGCGCACTCGCCGGCAATAATGATTACATTAATGTTGAAGGCACTGAACAAACACAAGATCCTTCTGTACAGGAGGTGAAGTAAGATGGATAGACTGCCTAGAATACCTTTAGCAGATATGATTGACCGTTTTGTTGACTGGATTACGATGACGTTTGGCGGATTCTTTGATGGAATCGCAAAC  >  NZ_CP034943/317256‑317534

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.