| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP034943 | = 2766994 | 202 (0.610) | 3 (0.010) +AGCAGCACATCTTCCGAATCAAAAGTCGAAACC |
3/172 | NT | 1.8% | coding (60/660 nt) | EO946_RS14310 | hypothetical protein |
| ? | NZ_CP034943 | 2767028 = | 229 (0.650) | coding (94/660 nt) | EO946_RS14310 | hypothetical protein | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CCATAAAACCACCGACAGGAAAAAATGTAAAACAAAGTTAATCATAACCGATATATGAAGCAGAAGGGAGTCTGACACATGAACAAACTGATACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NZ_CP034943/2766857‑2766994‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACTGTTCAGACAGCCGTAGCATTTAACCAAAAGGAATTGGAGAAAGAGCTAAAAAAACTAAAACCCGTTTCATTGGAAATGAAGTTTGAAAGTCCGCT > NZ_CP034943/2767028‑2767125 ||||||||||||||||||||||||||||||||| CCATAAAACCACCGACAGGAAAAAATGTAAAACAAAGTTAATCATAACCGATATATGAAGCAGAAGGGAGTCTGACACATGAACAAACTGATACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAG < 1:3687931/140‑1CCATAAAACCACCGACAGGAAAAAATGTAAAACAAAGTTAATCATAACCGATATATGAAGCAGAAGGGAGTCTGACACATGAACAAACTGATACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAG < 1:4139080/140‑1CCATAAAACCACCGACAGGAAAAAATGTAAAACAAAGTTAATCATAACCGATATATGAAGCAGAAGGGAGTCTGACACATGAACAAACTGATACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAG < 1:5353490/140‑1CCATAAAACCACCGACAGGAAAAAATGTAAAACAAAGTTAATCATAACCGATATATGAAGCAGAAGGGAGTCTGACACATGAACAAACTGATACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAG < 1:5424861/140‑1 CATAAAACCACCGACAGGAAAAAATGTAAAACAAAGTTAATCATAACCGATATATGAAGCAGAAGGGAGTCTGACACATGAACAAACTGATACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAGC > 1:5009514/1‑140 CATAAAACCACCGACAGGAAAAAATGTAAAACAAAGTTAATCATAACCGATATATGAAGCAGAAGGGAGTCTGACACATGAACAAACTGATACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAGC > 1:5644687/1‑140 AAAACCACCGACAGGAAAAAATGTAAAACAAAGTTAATCATAACCGATATATGAAGCAGAAGGGAGTCTGACACATGAACAAACTGATACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAGCAGC < 1:2412887/140‑1 AAAACCACCGACAGGAAAAAATGTAAAACAAAGTTAATCATAACCGATATATGAAGCAGAAGGGAGTCTGACACATGAACAAACTGATACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAGCAGC < 1:3203094/140‑1 CCGACAGGAAAAAATGTAAAACAAAGTTAATCATAACCGATATATGAAGCAGAAGGGAGTCTGACACATGAACAAACTGATACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAGC < 1:4098690/130‑1 CCGACAGGAAAAAATGTAAAACAAAGTTAATCATAACCGATATATGAAGCAGAAGGGAGTCTGACACATGAACAAACTGATACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAGC > 2:4098690/1‑130 TTTTCACATTGATGTTAACCGGTTGCTCGAATAGCAGCACATCTTCCGAATCAAAAGTCGAAACCACTGTTAAGACAACGGCAGCATTTCCTCAAAAGGAGCTGGAGAAAGAGCTAAAAAAACTAAAACCCGTTTCATTG > 1:1392700/1‑140 TTTTCACATTGATGTTAACCGGTTGCTCGAATAGCAGCACATCTTCCGAATCAAAAGTCGAAACCACTGTTAAGACAACGGCAGCATTTCCTCAAAAGGAGCTGGAGAAAGAGCTAAAAAAACTAAAACCCGTTTCATTG > 1:1392715/1‑140 CACATTGATGTTAACCGGTTGCTCGAATAGCAGCACATCTTCCGAATCAAAAGTCGAAACCACTGTTAAGACAACGGCAGCATTTCCTCAAAAGGAGCTGGAGAAAGAGCTAAAAAAACTAAAACCCGTTTCATTGGAca > 2:1861136/1‑138 TGCTCGAATAGCAGCACATCTTCCGAATCAAAAGTCGAAACCACTGTTAAGACAACGGCAGCATTTCCTCAAAAGGAGCTGGAGAAAGAGCTAAAAAAACTAAAACCCGTTTCATTGGACATGAAGTTCGAGAGTCCACT < 1:1861136/140‑1 ||||||||||||||||||||||||||||||||| CCATAAAACCACCGACAGGAAAAAATGTAAAACAAAGTTAATCATAACCGATATATGAAGCAGAAGGGAGTCTGACACATGAACAAACTGATACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NZ_CP034943/2766857‑2766994‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACTGTTCAGACAGCCGTAGCATTTAACCAAAAGGAATTGGAGAAAGAGCTAAAAAAACTAAAACCCGTTTCATTGGAAATGAAGTTTGAAAGTCCGCT > NZ_CP034943/2767028‑2767125 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |