BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NZ_CP034943	= 2766994	202 (0.610)	3 (0.010) +AGCAGCACATCTTCCGAATCAAAAGTCGAAACC	3/172	NT	1.8%	coding (60/660 nt)	EO946_RS14310	hypothetical protein
*	?	NZ_CP034943	2767028 =	229 (0.650)	3 (0.010) +AGCAGCACATCTTCCGAATCAAAAGTCGAAACC	3/172	NT	1.8%	coding (94/660 nt)	EO946_RS14310	hypothetical protein
Rejected: Frequency below/above cutoff threshold.

Only 100 of 259 total aligned reads displayed.

TACCATAAAACCACCGACAGGAAAAAATGTAAAACAAAGTTAATCATAACCGATATATGAAGCAGAAGGGAGTCTGACACATGAACAAACTGATACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAGCAGCAGCACATCTTCCGAACCAAAAGCTGAAACTGTTCAGACAGCCGTAGCATTTAACCAAAAGGAATTGGAGAAAGAGCTAAAAAAACTAAAACCCGTTTCATTGGAAATGAAGTTTGAAAGTCCGCTCGCTG  >  NZ_CP034943/2766855‑2767130

tACCATAAAACCACCGACAGGAAAAAATGTAAAACAAAGTTAATCATAACCGATATATGAAGCAGAAGGGAGTCTGACACATGAACAAACTGATACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAAt                                                                                                                                          <  2:1839258/140‑1 (MQ=255)

tACCATAAAACCACCGACAGGAAAAAATGTAAAACAAAGTTAATCATAACCGATATATGAAGCAGAAGGGAGTCTGACACATGAACAAACTGATACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAAt                                                                                                                                          >  2:5110228/1‑140 (MQ=255)

      aaaaCCACCGACAGGAAAAAATGTAAAACAAAGTTAATCATAACCGATATATGAAGCAGAAGGGAGTCTGACACATGAACAAACTGATACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATagcagc                                                                                                                                    <  1:2412887‑M1/140‑7 (MQ=255)

        aaCCACCGACAGGAAAAAATGTAAAACAAAGTTAATCATAACCGATATATGAAGCAGAAGGGAGTCTGACCCATGAACAAACTGATACAACTTGCTTTATTTTTCACATTGATAGTCACCGGTTGCTCGAATagcaccag                                                                                                                                  >  2:5166183/1‑140 (MQ=255)

            accGACAGGAAAAAATGTAAAACAAAGTTAATCATAACCGATATATGAAGCAGAAGGGAGTCTGACACATGAACAAACTGATACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAGCAGCAGcaca                                                                                                                              <  1:4048951/140‑1 (MQ=255)

             ccGACAGGAAAAAATGTAAAACAAAGTTAATCATAACCGATATATGAAGCAGAAGGGAGTCTGACACATGAACAAACTGATACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAGCATCAGCACAt                                                                                                                             >  2:3225722/1‑140 (MQ=255)

             ccGACAGGAAAAAATGTAAAACAAAGTTAATCATAACCGATATATGAAGCAGAAGGGAGTCTGACACATGAACAAACTGATACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAGCAGCAGCACAt                                                                                                                             >  1:5387398/1‑140 (MQ=255)

             ccGACAGGAAAAAATGTAAAACAAAGTTAATCATAACCGATATATGAAGCAGAAGGGAGTCTGACACATGAACAAACTGATACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAGCAGCAGCACAt                                                                                                                             >  1:2368130/1‑140 (MQ=255)

                aCAGGAAAAAATGTAAAACAAAGTTAATCATAACCGATATATGAAGCAGAAGGGAGTCTGACACATGAACAAACTGATACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAGCAGCAGCACATCtt                                                                                                                          >  1:4740216/1‑140 (MQ=255)

                        aaaTGTAAAACAAAGTTAATCATAACCGATATATGAAGCAGAAGGGAGTCTGACACATGAACAAACTGATACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAGCAGCAGCACATCTTCCGAACCa                                                                                                                  <  2:1387298/140‑1 (MQ=255)

                        aaaTGTAAAACAAAGTTAATCATAACCGATATATGAAGCAGAAGGGAGTCTGACACATGAACAAACTGATACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAGCAGCAGCACATCTTCCGAACCa                                                                                                                  <  2:655409/140‑1 (MQ=255)

                              aaaaCAAAGTTAATCATAACCGATATATGAAGCAGAAGGGAGTCTGACACATGAACAAACTGATACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAGCAGCAGCACATCTTCCGAACCa                                                                                                                  <  2:3021314/134‑1 (MQ=255)

                              aaaaCAAAGTTAATCATAACCGATATATGAAGCAGAAGGGAGTCTGACACATGAACAAACTGATACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAGCAGCAGCACATCTTCCGAACCa                                                                                                                  >  1:3021314/1‑134 (MQ=255)

                                  cAAAGTTAATCATAACCGATATATGAAGCAGAAGGGAGTCTGACACATGAACAAACTGATACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAGCAGCAGCACATCTTCCGAACCAAAAGCTGaaa                                                                                                        <  1:2206734/140‑1 (MQ=255)

                                  cAAAGTTAATCATAACCGATATATGAAGCAGAAGGGAGTCTGACACATGAACAAACTGATACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAGCAGCAGCACATCTTCCGAACCAAAAGCTGaaa                                                                                                        <  2:3591784/140‑1 (MQ=255)

                                  cAAAGTTAATCATAACCGATATATGAAGCAGAAGGGAGTCTGACACATGAACAAACTGATACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAGCAGCAGCACATCTTCCGAACCAAAAGCTGaaa                                                                                                        <  1:1656647/140‑1 (MQ=255)

                                  cAAAGTTAATCATAACCGATATATGAAGCAGAAGGGAGTCTGACACATGAACAAACTGATACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAGCAGCAGCACATCTTCCGAACCAAAAGCTGaaa                                                                                                        <  1:5698187/140‑1 (MQ=255)

                                  cAAAGTTAATCATAACCGATATATGAAGCAGAAGGGAGTCTGACACATGAACAAACTGATACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAGCAGCAGCACATCTTCCGAACCAAAAGCTGaaa                                                                                                        <  2:253149/140‑1 (MQ=255)

                                  cAAAGTTAATCATAACCGATATATGAAGCAGAAGGGAGTCTGACACATGAACAAACTGATACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAGCAGCAGCACATCTTCCGAACCAAAAGCTGaaa                                                                                                        <  2:1945254/140‑1 (MQ=255)

                                  cAAAGTTAATCATAACCGATATATGAAGCAGAAGGGAGTCTGACACATGAACAAACTGATACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAGCAGCAGCACATCTTCCGAACCAAAAGCTGaaa                                                                                                        <  2:100800/140‑1 (MQ=255)

                                  cAAAGTTAATCATAACCGATAGATGAAGCAGAAGTGAGTCTGACACATGAACAAACTGATACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAGCAGCAGCACATGTTCCGAACCAAAAGCTGaaa                                                                                                        <  2:48756/140‑1 (MQ=255)

                                    aaGTTAATCATAACCGATATATGAAGCAGAAGGGAGTCTGACACATGAACAAACTGATACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAGCAGCAGCACATCTTCCGAACCAAAAGCTGAAACt                                                                                                      <  2:298803/140‑1 (MQ=255)

                                          aTCATAACCGATATATGAAGCAGAAGGGAGTCTGACACATGAACAAACTGATACAACGTGCTTTATTTTTCACATTGCTAGTAACCGGTTGCGCGAATAGCAGCAGCACATCTTCCGAACCACAAGCTGAAACTGTTCAg                                                                                                <  2:2359545/140‑1 (MQ=255)

                                           tCATAACCGATATATGAAGCAGAAGGGAGTCTGACACATGAACAAACTGATACACCTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAGCAGCAGCACATCTTCCGAACCAAAAGCTGATACTGTTCAGa                                                                                               <  2:4291572/140‑1 (MQ=255)

                                           tCATAACCGATATATGAAGCAGAAGGGAGTCTGACACATGAACAAACTGATACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAGCAGCAGCACATCTTCCGAACCAAAAGCTGAAACTGTTCAGa                                                                                               <  1:1054885/140‑1 (MQ=255)

                                           tCATAACCGATATATGAAGCAGAAGGGAGTCTGACACATGAACAAACTGATACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAGCAGCAGCACATCTTCCGAACCAAAAGCTGAAACTGTTCAGa                                                                                               <  1:3002327/140‑1 (MQ=255)

                                           tCATAACCGATATATGAAGCAGAAGGGAGTCTGACACATGAACAAACTGATACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAGCAGCAGCACATCTTCCGAACCAAAAGCTGAAACTGTTCAGa                                                                                               <  2:2854358/140‑1 (MQ=255)

                                           tCATAACCGATATATGAAGCAGAAGGGAGTCTGACACATGAACAAACTGATACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAGCAGCAGCACATCTTCCGAACCAAAAGCTGAAACTGTTCAGa                                                                                               <  1:2382294/140‑1 (MQ=255)

                                           tCATAACCGATATATGAAGCAGAAGGGAGTCTGACACATGAACAAACTGATACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAGCAGCAGCACATCTTCCGAACCAAAAGCTGAAACTGTTCAGa                                                                                               <  1:1904588/140‑1 (MQ=255)

                                           tCATAACCGATATATGAAGCAGAAGGGAGTCTGACACATGAACAAACTGATACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAGCAGCAGCACATCTTCCGAACCAAAAGCTGAAACTGTTCAGa                                                                                               <  1:412019/140‑1 (MQ=255)

                                           tCATAACCGATATATGAAGCAGAAGGGAGTCTGACACATGAACAAACTGATACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAGCAGCAGCACATCTTCCGAACCAAAAGCTGAAACTGTTCAGa                                                                                               <  1:408973/140‑1 (MQ=255)

                                           tCATAACCGATATATGAAGCAGAAGGGAGTCTGACACATGAACAAACTGATACAACTTGCTTTATTTTTCACATTGATAGTAACCGGGTGCTCGAATAGCAGCAGCACATCTTCCGACCCAAAAGCTGAAACTGTTCAGa                                                                                               <  2:11827/140‑1 (MQ=255)

                                           acATAACCGATATATGAAGCAGAAGGGAGTCTGACACATGAACAAACTGATACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAGCAGCAGCACATCTTCCGAACCAAAAGCTGAAACTGTTCAGa                                                                                               <  1:1358315/139‑1 (MQ=255)

                                                 ccGATATATGAAGCAGAAGGGAGTCTGACACATGAACAAACTGATACAACTTGCTTTATTTTTCAGATTGATAGTAACCGGTTGCTCGAATAGCAGCAGCACATCTTCCGAACCAAAAGCTGAAACTGTTCAGACAGCCg                                                                                         >  1:3262495/1‑140 (MQ=255)

                                                 ccGATATATGAAGCAGAAGGGAGTCTGACACATGAACAAACTGATACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAGCAGCAGCACATCTTCCGAACCAAAAGCTGAAACTGTTCAGACAGCCg                                                                                         <  1:2549656/140‑1 (MQ=255)

                                                         tGAAGCAGAAGGGAGTCTGACACATGAACAAACTGATACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAGCAGCAGCACATCTTCCGAACCAAAAGCTGAAACTGTTCAGa                                                                                               <  2:2150875/126‑1 (MQ=255)

                                                         tGAAGCAGAAGGGAGTCTGACACATGAACAAACTGATACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAGCAGCAGCACATCTTCCGAACCAAAAGCTGAAACTGTTCAGa                                                                                               >  1:2150875/1‑126 (MQ=255)

                                                         tGAAGCAGAAGGGAGTCTGACACATGAACAAACTGATACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAGCAGCAGCACATCTTCCGAACCAAAAGCTGAAACTGTTCAGa                                                                                               >  1:1529304/1‑126 (MQ=255)

                                                               aGAAGGGAGTCTGACACATGAACAAACTGATACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAGCAGCAGCACATCTTCCGAACCAAAAGCTGAAACTGTTCAGACAGCCGTAGCATTTAACCaa                                                                           >  2:259059/1‑140 (MQ=255)

                                                               aGAAGGGAGTCTGACACATGAACAAACTGATACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAGCAGCAGCACATCTTCCGAACCAAAAGCTGAAACTGTTCAGACAGCCGTAGCATTTAACCaa                                                                           >  2:4844575/1‑140 (MQ=255)

                                                                gAAGGGAGTCTGACACATGAACAAACTGATACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAGCAGCAGCACATCTTCCGAACCAAAAGCTGAAACTGTTCAGACAGCCGTAGCATTTAACCaaa                                                                          <  1:3880519/140‑1 (MQ=255)

                                                                 aaGGGAGTCTGACACATGAACAAACTGATACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAGCAGCAGCACATCTTCCGAACCAAAAGCTGAAACTGTTCAGACAGCCGTAGCATTTAACCaaat                                                                         >  2:3351364/1‑139 (MQ=255)

                                                                 aaGGGAGTCTGACACATGAACAAACTGATACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAGCAGCAGCACATCTTCCGAACCAAAAGCTGAAACTGTTCAGACAGCCGTAGCATTTAACCaaaa                                                                         >  2:2404983/1‑140 (MQ=255)

                                                                 aaGGGAGTCTGACACATGAACAAACTGATACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAGCAGCAGCACATCTTCCGAACCAAAAGCTGAAACTGTTCAGACAGCCGTAGCATTTAACCaaaa                                                                         >  2:2248186/1‑140 (MQ=255)

                                                                 aaGGGAGTCTGACACATGAACAAACTGATACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAGCAGCAGCACATCTTCCGAACCAAAAGCTGAAACTGTTCAGACAGCCGTAGCATTTAACCaaaa                                                                         <  2:1484892/140‑1 (MQ=255)

                                                                 aaGGGAGTCTGACACATGAACAAACTGATACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAGCAGCAGCACATCTTCCGAACCAAAAGCTGAAACTGTTCAGACAGCCGTAGCATTTAACCaaaa                                                                         >  1:3612427/1‑140 (MQ=255)

                                                                 aaGGGAGTCTGACACATGAACAAACTGATACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAGCAGCAGCACATCTTCCGAACCAAAAGCTGAAACTGTTCAGACAGCCGTAGCATTTAACCaaaa                                                                         >  2:669459/1‑140 (MQ=255)

                                                                 aaGGGAGTCTGACACATGAACAAACTGATACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAGCAGCAGCACATCTTCCGAACCAAAAGCTGAAACTGTTCAGACAGCCGTAGCATTTAACCaaaa                                                                         >  2:5391179/1‑140 (MQ=255)

                                                                 aaGGGAGTCTGACACATGAACAAACTGATACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAGCAGCAGCACATCTTCCGAACCAAAAGCTGAAACTGTTCAGACAGCCGTAGCATTTAACCaaaa                                                                         >  2:5029415/1‑140 (MQ=255)

                                                                      aGTCTGACACATGAACAAACTGTTACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAGCAGCAGCACATCTTCCGAACCAAAAGCTGAAACTGTTCAGACAGCCGTAGCATTTAACCAAAAGGAAt                                                                    >  2:1083047/1‑140 (MQ=255)

                                                                      aGTCTGACACATGAACAAACTGATACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAGCAGCAGCACATCTTCCGAACCAAAAGCTGAAACTGTTCAGACAGCCGTAGCATTTAACCCAAAGGAAt                                                                    >  1:1003988/1‑140 (MQ=255)

                                                                       gTCTGACACATGAACAAACTGATACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAGCAGCAGCACATCTTCCGAACCAAAAGCTGAAACTGTTCAGACAGCCGTAGCATTTAACCAAAAGGAAtt                                                                   <  1:5801323/140‑1 (MQ=255)

                                                                       gTCTGACACATGAACAAACTGATACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAGCAGCAGCACATCTTCCGAACCAAAAGCTGAAACTGTTCAGACAGCCGTAGCATTTAACCAAAAGGAAtt                                                                   <  1:3502286/140‑1 (MQ=255)

                                                                        tCTGACACATGAACAAACTGATACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAGCAGCAGCACATCTTCCGAACCAAAAGCTGAAACTGTTCAGACAGCCGTAGCATTTAACCAAAAGGaa                                                                     >  1:2106279/1‑137 (MQ=255)

                                                                        tCTGACACATGAACAAACTGATACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAGCAGCAGCACATCTTCCGAACCAAAAGCTGAAACTGTTCAGACAGCCGTAGCATTTAACCAAAAGGAATTg                                                                  >  1:2674061/1‑140 (MQ=255)

                                                                        tCTGACACATGAACAAACTGATACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAGCAGCAGCACATCTTCCGAACCAAAAGCTGAAACTGTTCAGACAGCCGTAGCATTTAACCAAAAGGAATTg                                                                  >  2:1262312/1‑140 (MQ=255)

                                                                        tCTGACACATGAACAAACTGATACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAGCAGCAGCACATCTTCCGAACCAAAAGCTGAAACTGTTCAGACAGCCGTAGCATTTAACCAAAAGGAATTg                                                                  >  1:5036329/1‑140 (MQ=255)

                                                                        tCTGACACATGAACAAACTGATACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAGCAGCAGCACATCTTCCGAACCAAAAGCTGAAACTGTTCAGACAGCCGAAGCATTTAACCACAAGGAATTg                                                                  >  2:4754076/1‑140 (MQ=255)

                                                                           gACACATGAACAAACTGATACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAGCAGCAGCACATCTTCCGAACCAAAAGCTGAAACTGTTCAGACAGCCGTAGCATTTAACCAAAAGGAATTGgag                                                               >  1:2920978/1‑140 (MQ=255)

                                                                                  gAACAAACTGTTACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAGCAGCAGCACATCTTCCGAACCAAAAGCTGAAACTGTTCAGACAGCCGTAGCATTTAACCAAAAGGAATTGGAGAAAGAGc                                                        >  1:691150/1‑140 (MQ=255)

                                                                                  gAACAAACTGATACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAGCAGCAGCACATCTTCCGAACCAAAAGCTGAAACTGTTCAGACAGCCGTAGCATTTAACCAAAAGGAATTGgaga                                                              <  2:3669388/134‑1 (MQ=255)

                                                                                  gAACAAACTGATACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAGCAGCAGCACATCTTCCGAACCAAAAGCTGAAACTGTTCAGACAGCCGTAGCATTTAACCAAAAGGAATTGgaga                                                              >  1:3669388/1‑134 (MQ=255)

                                                                                  gAACAAACTGATACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAGCAGCAGCACATCTTCCGAACCAAAAGCTGAAACTGTTCAGACAGCCGTAGCATTTAACCAAAAGGAATTGGAGAAAGAGc                                                        >  1:4979008/1‑140 (MQ=255)

                                                                                       aaCTGATACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAGCAGCAGCACATCTTCCGAACCAAAAGCTGAAACTGTTCAGACCGCCGTAGCATTTAACCAAAAGGAATTGGAGAAAGAGCTaaaa                                                   <  1:1436338/140‑1 (MQ=255)

                                                                                       aaCTGATACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAGCAGCAGCACATCTTCCGAACCAAAAGCTGAAACTGTTCAGACAGCCGTAGCATTTAACCAAAAGGAATTGGAGAAAGAGCTaaaa                                                   <  1:2455020/140‑1 (MQ=255)

                                                                                       aaCTGATACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAGCAGCAGCACATCTTCCGAACCAAAAGCTGAAACTGTTCAGACAGCCGTAGCATTTAACCAAAAGGAATTGGAGAAAGAGCTaaaa                                                   <  2:3070226/140‑1 (MQ=255)

                                                                                          tGATACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAGCAGCAGCACATCTTCCGAACCAAAAGCTGAAACTGTTCAGACAGCCGTAGCATTTAACCAAAAGGAATTGGAGAAAGAGCTaaaaaaa                                                >  2:2387907/1‑140 (MQ=255)

                                                                                            aTACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAGCAGCAGCACATCTTCCGAACCAAAAGCTGAAACTGTTCAGACAGCCGTAGCATTTAACCAAAAGGAATTGGAGAAAGAGCTAAAAAAACt                                              >  1:4270483/1‑140 (MQ=255)

                                                                                            aTACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAGCAGCAGCACATCTTCCGAACCAAAAGCTGAAACTGTTCAGACAGCCGTAGCATTTAACCAAAAGGAATTGGAGAAAGAGCTAAAAAAACt                                              >  2:3983347/1‑140 (MQ=255)

                                                                                             tACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAGCAGCAGCACATCTTCCGAACCAAAAGCTGAAACTGTTCAGACAGCCGTAGCATTTAACCAAAAGGAATTGGAGAAAGAGCTAAAAAAACTa                                             <  2:811817/140‑1 (MQ=255)

                                                                                                  cTTGCTTTATTTTTCACATTGATCGTAACCGGTTGCTCGAATAGCAGCAGCACATCTTCCGAACCAAAAGCTGAAACTGTTCAGACAGCCGTAGCATTTAACCAAAAGGAATTGGAGAAAGAGCTAAAAAAACTAAAAcc                                        >  2:1421660/1‑140 (MQ=255)

                                                                                                  cTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAGCAGCAGCACATCTTCCGAACCAAAAGCTGAAACTGTTCAGACAGCCGTAGCATTTAACCAAAAGGAATTGGAGAAAGAGCTAAAAAAACTAAAAcc                                        >  2:716995/1‑140 (MQ=255)

                                                                                                  cTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAGCAGCAGCACATCTTCCGAACCAAAAGCTGAAACTGTTCAGACAGCCGTAGCATTTAACCAAAAGGAATTGGAGAAAGAGCTAAAAAAACTAAAAcc                                        >  2:1210817/1‑140 (MQ=255)

                                                                                                    tGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAGCAGCAGCACATCTTCCGAACCAAAAGCTGAAACTGTTCAGACAGCCGTAGCATTTAACCAAAAGGAATTGGAGAAAGAGCTAAAAAAACTAAAACCCg                                      >  2:3511555/1‑140 (MQ=255)

                                                                                                          aTTTTTCACATTGATAGTAACCGGTTGCTCGAATAGCAGCAGCACATCTTCCGAACCAAAAGCTGAAACTGTTCAGACAGCCGTAGCATTTAACCAAAAGGAATTGGAGAAAGAGCTAAAAAAACTAAAACCCGTTTCAt                                <  2:5707434/140‑1 (MQ=255)

                                                                                                            ttttCACATTGATGTTAACCGGTTGCTCGAATagcagcacatcttccgaatcaaaagtcgaaaccactgttaagacaacggcagcatttcctcaaaaggagctggagaaagagctaaaaaaactaaaacccgtttcattg                              >  1:1392700‑M1/1‑32 (MQ=255)

                                                                                                            ttttCACATTGATAGTAACCGGTTGCTCGAATAGCAGCAGCACATCTTCCGAACCAAAAGCTGAAACTGTTCAGACAGCCGTAGCATTTAACCAAAAGGAATTGGAGAAAGAGCTAAAAAAACTAAAACCCGTTTCATTg                              >  2:2302470/1‑140 (MQ=255)

                                                                                                                cacaTTGATAGTAACCGGTTGCTCGAATAGCAGCAGCACATCTTCCGAACCAAAAGCTGAAACTGTTCAGACAGCCGTAGCATTTAACCaaa                                                                          >  1:5221423/1‑92 (MQ=255)

                                                                                                                  caTTGATAGTAACCGGTTGCTCGAATAGCAGCAGCACATCTTCCGAACCAAAAGCTTAAACTGTTCAGACAGCCGTAGCATTTAACCAAAAGGAATTGGAGAAAGAGCTAAAAAAACTAAAACCCGTTTCATTGGAAATg                        <  1:1259795/140‑1 (MQ=255)

                                                                                                                          gTAACCGGTTGCTCGAATAGCAGCAGCACATCTTCCGAACCAAAAGCTGAAACTGTTCAGACAGCCGTAGCATTTAACCAAAAGGAATTGGAGAAAGAGCTAAAAAAACTAAAACCCGTTTCATTGGAAATGAAGTTTGa                <  2:5576153/140‑1 (MQ=255)

                                                                                                                           tAACCGGTTGCTCGAATAGCAGCAGCACATCTTCCGAACCAACAGCTGAAACTGTTCAGACAGCCGTAGCATTTAACCAAAAGGAATTGGAGAAAGAGCTAAAAAAACTAAAACCCGTTTCATTGGAAATGAAGTTTGaa               <  1:1786792/140‑1 (MQ=255)

                                                                                                                             aCCGGTTGCTCGAATAGCAGCAGCACATCTTCCGAACCAAAAGCTGAAACTGTTCAGACAGCCGTAGCATTTAACCAAAAGGAATTGGAGAAAGAGCTAAAAAAACTAAAACCCGTTTCATTGGAAATGAAGTTTGAAAg             >  2:1978355/1‑140 (MQ=255)

                                                                                                                             aCCGGTTGCTCGAATAGCAGCAGCACATCTTACGAACCAAAAGCTGAAACTGTTCAGACAGCCGTAGCATTTAACCAAATGGAATTGGAGAAAGAGCTAAAAAAACTAAAACCCGTTTCCTTGGAAATGAAGTTTGAAAg             >  2:3545199/1‑140 (MQ=255)

                                                                                                                                 ggtGCTCGAATAGCAGCAGCACATCTTCCGCCCCAAAAGCTGAAACTGTTCAGACAGCCGTAGCAGTTAACCAAAAGGAAGTGGAGAAAGAGCTAAAAAAACTAAAACCCGTTTCATTGGAAATGAAGTTTGAAAGTCcg         >  2:1672914/3‑140 (MQ=255)

                                                                                                                                 gTTGCTCGAATAGCAGCAGCACATCTTCCGAACCAAAAGCTGAAACTGTTCAGACAGCCGTAGCATTTAACCAAAAGGAATTGGAGAAAGAGCTAAAACTACTAAAACCCGTTTCATTGGAAATGAAGTTTGAAAGTCcg         >  1:3919569/1‑140 (MQ=255)

                                                                                                                                 gTTGCTCGAATAGCAGCAGCACATCTTCCGAACCAAAAGCTGAAACTGTTCAGACAGCCGTAGCATTTAACCAAAAGGAATTGGAGAAAGAGCTAAAAAAACTAAAACCCGTTTCATTTGAAATGAAGTTTGAAAGTCcg         >  2:5308897/1‑140 (MQ=255)

                                                                                                                                 gTTGCTCGAATAGCAGCAGCACATCTTCCGAACCAAAAGCTGAAACTGTTCAGACAGCCGTAGCATTTAACCAAAAGGAATTGGAGAAAGAGCTAAAAAAACTAAAACCCGTTTCATTGGAAATGaa                      >  2:4662154/1‑127 (MQ=255)

                                                                                                                                 gTTGCTCGAATAGCAGCAGCACATCTTCCGAACCAAAAGCTGAAACTGTTCAGACAGCCGTAGCATTTAACCAAAAGGAATTGGAGAAAGAGCTAAAAAAACTAAAACCCGTTTCATTGGAAATGAAGTTTGAAAGTCcg         >  2:3906535/1‑140 (MQ=255)

                                                                                                                                 gTTGCTCGAATAGCAGCAGCACATCTTCCGAACCAAAAGCTGAAACTGTTCAGACAGCCGTAGCATTTAACCAAAAGGAATTGGAGAAAGAGCTAAAAAAACTAAAACCCGTTTCATTGGAAATGAAGTTTGAAAGTCcg         >  2:190931/1‑140 (MQ=255)

                                                                                                                                 gTTGCTCGAATAGCAGCAGCACATCTTCCGAACCAAAAGCTGAAACTGTTCAGACAGCCGTAGCATTTAACCAAAAGGAATTGGAGAAAGAGCTAAAAAAACTAAAACCCGTTTCATTGGAAATGAAGTTTGAAAGTCcg         >  2:2782240/1‑140 (MQ=255)

                                                                                                                                 gTTGCTCGAATAGCAGCAGCACATCTTCCGAACCAAAAGCTGAAACTGTTCAGACAGCCGTAGCATTTAACCAAAAGGAATTGGAGAAAGAGCTAAAAAAACTAAAACCCGTTTCATTGGAAATGAAGTTTGAAAGTCcg         >  1:4491089/1‑140 (MQ=255)

                                                                                                                                 gTTGCTCGAATAGCAGCAGAACATCTTCCGAACCAAAAGCTGAAACTGTTCAGACAGCCGTAGCATTTAACCAAAAGGAATTGTAGAAAGAGCTAAAAAAACTAAAACCCGTTTCATTGGAAATGAAGTTTGAAAGTCcg         >  2:2333029/1‑140 (MQ=255)

                                                                                                                                   tGCTCGAATagcagcacatcttccgaatcaaaagtcgaaaccactgttaagacaacggcagcatttcctcaaaaggagctggagaaagagctaaaaaaactaaaacccgtttcattggacatgaagttcgagagtccact       <  1:1861136‑M1/140‑132 (MQ=255)

                                                                                                                                   tGCTCGAATAGCAGCAGCACATCTTCCGAACCAAAAGCTGAAACTGTTCAGACAGCCGTAGCATTTAACCAAAAGGAATTGGAGAAAGAGCTAAAAAAACTAAAACCCGTTTCATTGGACATGAAGTTTGAAAGTCcgct       >  2:4028730/1‑140 (MQ=255)

                                                                                                                                     cTCGAATAGCAGCAGCACATCTTCCGAACCAAAAGCTGAAACTGTTCAGACAGCCGTAGCATTTAACCAAAAGGAATTGGAGAAAGAGCTAAAAAAACTAAAACCCGTTTCATTGGAAATGAAGTTTGAAAGTCcgctcg     >  1:4923695/1‑140 (MQ=255)

                                                                                                                                        gAATAGCAGCAGCACATCTTCCGAACCAAAAGCTGAAACTGTTCAGACAGCCGTAGCATTTAACCAAAAGGAATTGGAGAAAGAGCTAAAAAAACTAAAACCCGTTTCATTGGAAATGAAGTTTGAAAGTCCGCTCgctg  <  1:3817460/140‑1 (MQ=255)

                                                                                                                                        gAATAGCAGCAGCACATCTTCCGAACCAAAAGCTGAAACTGTTCAGACAGCCGTAGCATTTAACCAAAAGGAATTGGAGAAAGAGCTAAAAAAACTAAAACCCGTTTCATTGGAAATGAAGTTTGAAAGTCCGCTCgctg  <  1:4284242/140‑1 (MQ=255)

                                                                                                                                        gAATAGCAGCAGCACATCTTCCGAACCAAAAGCTGAAACTGTTCAGACAGCCGTAGCATTTAACCAAAAGGAATTGGAGAAAGAGCTAAAAAAACTAAAACCCGTTTCATTGGAAATGAAGTTTGAAAGTCCGCTCgctg  <  1:513175/140‑1 (MQ=255)

                                                                                                                                        gAATAGCAGCAGCACATCTTCCGAACCAAAAGCTGAAACTGTTCAGACAGCCGTAGCATTTAACCAAAAGGAATTGGAGAAAGAGCTAAAAAAACTAAAACCCGTTTCATTGGAAATGAAGTTTGAAAGTCCGCTCgctg  <  1:3684617/140‑1 (MQ=255)

                                                                                                                                        gAATAGCAGCAGCACATCTTCCGAACCAAAAGCTGAAACTGTTCAGACAGCCGTAGCATTTAACCAAAAGGAATTGGAGAAAGAGCTAAAAAAACTAAAACCCGTTTCATTGGAAATGAAGTTTGAAAGTCCGCTCgctg  <  1:5457370/140‑1 (MQ=255)

TACCATAAAACCACCGACAGGAAAAAATGTAAAACAAAGTTAATCATAACCGATATATGAAGCAGAAGGGAGTCTGACACATGAACAAACTGATACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAGCAGCAGCACATCTTCCGAACCAAAAGCTGAAACTGTTCAGACAGCCGTAGCATTTAACCAAAAGGAATTGGAGAAAGAGCTAAAAAAACTAAAACCCGTTTCATTGGAAATGAAGTTTGAAAGTCCGCTCGCTG  >  NZ_CP034943/2766855‑2767130

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.