BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NZ_CP034943	= 3299602	284 (0.810)	3 (0.010) +TTTTTCA	3/238	NT	1.1%	intergenic (‑300/+9)	EO946_RS17065/gap	phosphoglycerate kinase/type I glyceraldehyde‑3‑phosphate dehydrogenase
*	?	NZ_CP034943	3299603 =	284 (0.810)	3 (0.010) +TTTTTCA	3/238	NT	1.1%	intergenic (‑301/+8)	EO946_RS17065/gap	phosphoglycerate kinase/type I glyceraldehyde‑3‑phosphate dehydrogenase
Rejected: Frequency below/above cutoff threshold.

Only 100 of 297 total aligned reads displayed.

CTAAAAACGCGGTCGTTTCTCTATCACAGAACGTTTTCTGAAAGCCGGTCTTCATGGAAAAAGGGAAAGGGAGTCCGTCCCCTTCCCTTGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCAACAACGCGGTTAGAGTAGCCGCTTTCGTTATCGTACCAAGAAATTACTTTTACCATGCTGCCTTCCATAACCATTGTAGAAAGAGCATCGAT  >  NZ_CP034943/3299466‑3299739

  aaaacCGCGGTCGTTTCTCTATCACAGAACGTTTTCTGAAAGCCGGTCTTCATGGAAAAAGGGAAAGGGAGTCCGTCCCCTTCCCTTGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCtat                                                                                                                                      <  1:4363372/140‑1 (MQ=255)

   aaaaCGCGGTCGTTTCTCTATCACAGCACGTTTTCTGACAGCCGCTCTGCATGGAAAAAGCGACAGGGAGTCCGTCCCCTTCCCTTGTCCGCTTTCATTATAGCGCGTCTATTCAAAAGAACCAAGTCAGGTCCGCtata                                                                                                                                     <  2:3520237/140‑1 (MQ=255)

   aaaaCGCGGTCGTTTCTCTATCACAGCACGTTTTCTGAAAGCCGGTCTTCATGGAAAAAGGGAAAGGGAGTCCGTCCCCTTCCCTTGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCtata                                                                                                                                     <  2:1316895/140‑1 (MQ=255)

                     tATCACAGAACGTTTTCTGAAAGCCGGTCTTCATGGAAAAAGGGAAAGGGAGTCCGTCCCCTTCCCTTGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCttttttt                                                                                                                   <  1:651952/140‑1 (MQ=255)

                        cacaGAACGTTTTCTGAAAGCCGGTCTTCATGGAAAAAGGGAAAGGGAGTCCGTCCCCTTCCCTTGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCg                                                                                                                >  2:4516624/1‑140 (MQ=255)

                          caGAACGTTTTCTGAAAGCCGGTCTTCATGGAAAAAGGGAAAGGGAGTCCGTCCCCTTCCCTTGTCCGCTTTCATTAAAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGAt                                                                                                              >  2:2883128/1‑140 (MQ=255)

                            gAACGTTTTCTGAAAGCCGGTCTTCCTGGAAAAAGGGAAAGGGAGTCCGTCCCCTGCCCGTGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGt                                                                                                            <  1:4254655/140‑1 (MQ=255)

                            gAACGTTTTCTGAAAGCCGGTCTTCATGGAAAAAGGGAAAGGGAGTCCGTCCCCTTCCCTTGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGt                                                                                                            <  2:3117868/140‑1 (MQ=255)

                             aaCGTTTTCTGAAAGCCGGTCTTCATGGAAAAAGGGAAAGGGAGTCCGTCCCCTTCCCTTGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAATACCTTTTTTTGCGATGTa                                                                                                           >  2:3580305/1‑140 (MQ=255)

                             aaCGTTTTCTGAAAGCCGGTCTTCATGGAAAAAGGGAAAGGGAGTCCGTCCCCTTCCCTTGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTa                                                                                                           >  2:401586/1‑140 (MQ=255)

                                 ttttCTGAAAGCCGGTCTTCATGGACAAAGGGCAAGGGAGGCCGTCCCCTTCCCTTGTCCGCTTTCCTTATAGCGCTTCTATTCAAAAGACCCAAGTCAGGTCCGCTATAAAGTAAAGACCTTTTTTTGCGTTGTAAGCt                                                                                                       >  2:1702826/1‑140 (MQ=255)

                                 ttttCTGAAAGCCGGTCTTCATGGAAAAAGGGAAAGGGAGTCCGTCCCCTTCCCTTGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCt                                                                                                       <  2:332927/140‑1 (MQ=255)

                                 ttttCTGAAAGCCGGTCTTCATGGAAAAAGGGAAAGGGAGTCCGTCCCCTTCCCTTGTCCGCTTTCATTATAGCGCTTATATTCAAAAGAACCACGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCt                                                                                                       <  1:5113378/140‑1 (MQ=255)

                                 ttgtCTGAAAGCCGGTCTTCATGGAAAAAGGGAAAGGGAGTCCGTCCCCTTCCCTTGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCt                                                                                                       <  1:3349820/137‑1 (MQ=255)

                                   ttCTGAAAGCCGGTCTTCATGGAAAAAGGGAAAGGGAGTCCGTCCCCTTCCCTTGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGc                                                                                                     <  1:2420019/140‑1 (MQ=255)

                                     cTGAAAGCCGGTCTTCATGGAAAAAGGGAAAGGGAGTCCGTCCCCTTCCCTTGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCaa                                                                                                   <  1:5575107/140‑1 (MQ=255)

                                        aaaGCCGGTCTTCATGGAAAAAGGGAAAGGGAGTCCGTCCCCTTCCCTTGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGt                                                                                                <  1:3839611/140‑1 (MQ=255)

                                              ggTCTTCATGGAAAAAGGGAAAGGGAGTCCGTCCCCTTCCCTTGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTcaacaa                                                                                          <  2:2053445/140‑1 (MQ=255)

                                              ggTCTTCATGGAAAAAGGGAAAGGGAGTCCGTCCCCTTCCCTTGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTcaacaa                                                                                          <  1:828170/140‑1 (MQ=255)

                                              ggTCTTCATGGAAAAAGGGAAAGGGACTCCGTCCCCTTCCCTTGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTcaacaa                                                                                          <  2:2631386/140‑1 (MQ=255)

                                              ggTATTCATGGAAAAAGGGAAAGGGAGTCCGTCCCCTTCCCTTGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTcaacaa                                                                                          <  2:1347745/140‑1 (MQ=255)

                                                    cATGTAAAAAGGGAAAGGGAGTCCGTCCCCTTCCCGTGTCCGCTTTGATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAATTTAAAGACCTGTTTTTGCGATGTAAGCTGCAAGGTCAACAACGCGGt                                                                                    <  1:4883349/140‑1 (MQ=255)

                                                    cATGGAAAAAGGGAAAGGGAGTCCGTCCCCTTCCCTTGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTCAGCTGCAAGGTCAACAACGCGGt                                                                                    >  1:1789615/1‑140 (MQ=255)

                                                    cATGGAAAAAGGGAAAGGGAGTCCGTCCCCTTCCCTTGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCAACAACGCGGt                                                                                    <  1:4544944/140‑1 (MQ=255)

                                                    cATGGAAAAAGGGAAAGGGAGTCCGTCCCCTTCCCTTGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCAACAACGCGGt                                                                                    <  1:5672571/140‑1 (MQ=255)

                                                    cATGGAAAAAGGGAAAGGGAGTCCGTCCCCTTCCCTTGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCAACAACGCGGt                                                                                    >  1:3441020/1‑140 (MQ=255)

                                                    cATGGAAAAAGGGAAAGGGAGTCCGTCCCCTTCCCTTGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCAACAACGCGGt                                                                                    <  1:3508732/140‑1 (MQ=255)

                                                    cATCGAAAAAGGGAAAGCGAGTCCGTCCCCTTCACTTGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCCAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCAACAACGCGGt                                                                                    <  2:4713655/140‑1 (MQ=255)

                                                          aaaaGGGAAAGGGAGTCCGTCCCCTTCCCTTGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCAACAACGCGGTTAGAGt                                                                              >  2:5526707/1‑140 (MQ=255)

                                                                   agggaGTCCGTCCCCTTCCCTTGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTCTAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCAACAACGCGGTTAGAGTAGCCGCttt                                                                     >  2:5760961/1‑140 (MQ=255)

                                                                   agggaGTCCGTCCCCTTCCCTTGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTcaacaa                                                                                          <  1:3159449/119‑1 (MQ=255)

                                                                   agggaGTCCGTCCCCTTCCCTTGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTcaacaa                                                                                          >  2:3159449/1‑119 (MQ=255)

                                                                   agggaGTCCGTCCCCTTCCCTTGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCAACAACGCGGTTAGAGTAGCCGCttt                                                                     >  2:1151051/1‑140 (MQ=255)

                                                                   agggaGTCCGTCCCCTTCCCTTGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCAACAACGCGGTTAGAGTAGCCGCttt                                                                     <  2:1629234/140‑1 (MQ=255)

                                                                   agggaGTCCGTCCCCTTCCCTTGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCAACAACGCGGTTAGAGTAGCCGCttt                                                                     >  2:221458/1‑140 (MQ=255)

                                                                   agggaGTCCGTCCCCTTCCCTTGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCAACAACGCGGTTAGAGTAGCCGCttt                                                                     >  2:2354208/1‑140 (MQ=255)

                                                                              ccccTTCCCTTGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCAACAACGCGGTTAGAGTAGCCGCTTTCGTTATCGTAc                                                          >  2:2547729/1‑140 (MQ=255)

                                                                               cccttcccttGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCAACAACGCGGTTAGAGTAGCCGCTTTCGTTATCGTAcc                                                         <  1:5747442/140‑1 (MQ=255)

                                                                                ccttcccttGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCAACAACGCGGTTAGAGTAGCCGCTTTCGTTATCGTACCa                                                        >  1:4245468/1‑140 (MQ=255)

                                                                                   tcccttGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCAACAACGCGGTTAGAGTAGCCGCTTTCGTTATCGTACCAAGa                                                     >  2:845826/1‑140 (MQ=255)

                                                                                    cccttGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCCAGGTCAACAACGCGGTTAGAGTAGCCGCTGTCGTTATCGTACCAAGaa                                                    >  1:1484768/1‑140 (MQ=255)

                                                                                     ccttGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCAACAACGCGGTTAGAGTAGCCGCTTTCGTTATCGTACCAAGaaa                                                   <  1:1284818/140‑1 (MQ=255)

                                                                                      cttGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTCTGCGATGTAAGCTGCAAGGTCAACAACGCGGTTAGAGTAGCCGCTTTCGTTATCGTACCAAGAAAt                                                  <  2:5710069/140‑1 (MQ=255)

                                                                                       ttGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCAACAACGCGGTTAGAGTAGCCGCTTTCGTTATCGTACCAAGAAAtt                                                 >  2:5470066/1‑140 (MQ=255)

                                                                                        tGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCAACAACGCGGTTAGAGTAGCCGCTTTCGTTATCGTACCAAGAAATTa                                                >  1:4833004/1‑140 (MQ=255)

                                                                                         gTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCAACAACGCGGTTAGAGTAGCCGCTTTCGTTATCGTACCAAGAAATTAc                                               >  2:1609405/1‑140 (MQ=255)

                                                                                         gTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCAACAACGCGGTTAGAGTAGCCGCTTTCGTTATCGTACCAAGAAATTAc                                               <  2:715343/140‑1 (MQ=255)

                                                                                         gTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCAACAACGCGGTTAGAGTAGCCGCTTTCGTTATCGTACCAAGAAATTAc                                               <  2:4833004/140‑1 (MQ=255)

                                                                                          tCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCAACAACGCGGTTAGAGTAGCCGCTTTCGTTATCGTACCAAGAAATTACt                                              >  1:3028293/1‑140 (MQ=255)

                                                                                          tCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCAACAACGCGGTTAGAGTAGCCGCTTTCGTTATCGTACCAAGAAATTACt                                              >  2:5227840/1‑140 (MQ=255)

                                                                                          tCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCAACAACGCGGTTAGAGTAGCCGCTTTCGTTATCGTACCAAGAAATTACt                                              >  2:1237536/1‑140 (MQ=255)

                                                                                          tCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCAACAACGCGGTTAGAGTAGCCGCTTTCGTTATCGTACCAAGAAATTACt                                              >  2:2455408/1‑140 (MQ=255)

                                                                                          tCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCAACAACGCGGTTAGAGTAGCCGCTTTCGTTATCGTACCAAGAAATTACt                                              >  2:1054936/1‑140 (MQ=255)

                                                                                          tCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCAACAACGCGGTTAGAGTAGCCGCTTTCGTTATCGTACCAAGAAATTACt                                              >  1:4560954/1‑140 (MQ=255)

                                                                                          tCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCAACAACGCGGTTAGAGTAGCCGCTTTCGTTATCGTACCAAGAAATTACt                                              >  1:2454963/1‑140 (MQ=255)

                                                                                          tCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCAACAACGCGGTTAGAGTAGCCGCTTTCGTTATCGTACCAAGAAATTACt                                              >  1:5494300/1‑140 (MQ=255)

                                                                                            cGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCAACAACGCGGTTAGAGTAGCCGCTTTCGTTATCGTACCAAGAAATTACttt                                            >  1:2177147/1‑140 (MQ=255)

                                                                                              cTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCAACAACGCGGTTCGAGAAGCCGCTTTCGTTATCGTACCAAGAAATTACTTTTa                                          >  1:3761589/1‑140 (MQ=255)

                                                                                              cTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCAACAACGCGGTTAGAGTAGCCGCTTTCGTTATCGTCCCATGAAATTACttttc                                          >  1:4999735/1‑139 (MQ=255)

                                                                                              cTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCAACAACGCGGGTAGAGTAGCCGCTGTCGTTATCGTACCAAGAAATTACTTTTa                                          >  1:3215536/1‑140 (MQ=255)

                                                                                               tttCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCAACAACGCGGTTAGAGTAGCCGCTTTCGTTATCGTACCAAGAAATTACTTTTAc                                         >  2:4980828/1‑140 (MQ=255)

                                                                                               tttCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCAACAACGCGGTTAGAGTAGCCGCTTTCGTTATCGTACCAAGAAATTACTTTTAc                                         >  2:602140/1‑140 (MQ=255)

                                                                                               tttCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGAGATGTAAGCTGCAAGGTCAACAACGCGGATAGAGTAGCCGCTTTCGTTATCGTACCAAGAAATTACTTTTAc                                         >  2:2975895/1‑140 (MQ=255)

                                                                                                ttCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCAACAACGCGGTTAGAGTAGCCGCTTTCGTTATCGTACCAAGAAATTACTTTTAcc                                        <  1:4097300/140‑1 (MQ=255)

                                                                                                ttCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCAACAACGCGGTTAGAGTAGCCGCTTTCGTTATCGTACCAAGAAATTACTTTTAcc                                        <  1:248838/140‑1 (MQ=255)

                                                                                                 tCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCAACAACGCGGTTAGAGTAGCCGCTTTCGTTATCGTACCAAGAAATTACTTTTACCa                                       >  1:2800306/1‑140 (MQ=255)

                                                                                                   aTTATAGCGCTTCTATTCAAAAGAACCAAGTCATGTCCGCTATAAATTAAAGACCTTTTTTTGCTATGTAAGCTGCAAGGTCAACATCGCGGTTAGAGTAGCCGCTTTCGTTATCGTACCAAGAAATTACTTTTACCAtg                                     <  1:3107134/140‑1 (MQ=255)

                                                                                                   aTTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCAACAACGCGGTTAGAGTAGCCGCTTTCGTTATCGTACCAAGAAATTACTTTTACCAtg                                     <  2:3607169/140‑1 (MQ=255)

                                                                                                    ttATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCAACAACGCGGTTAGAGTAGCCGCTTTCGTTATCGTACCAAGAAATTACTTTTACCAtgc                                    >  1:1635720/1‑140 (MQ=255)

                                                                                                    ttATAGCGCTTCTATTCAAAAGAACCAAGTAAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTCAGCTGCAAGGTCAACAACGCGGTTAGATTAGCCGCTTTCGTTATCGTACCAAGGAATTACTTTTACCAtgc                                    >  1:3644535/1‑140 (MQ=255)

                                                                                                      ataGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCAACAACGCGGTTAGAGTAGCCGCTTTCGTTATCGTACCAAGAAATTACTTTTACCAtgctg                                  <  1:1341456/140‑1 (MQ=255)

                                                                                                       taGCGCTTCTATTCAAAAGATCCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCAACAACGCGGTTAGAGTAGCCGCTTTCGTTATCGTACCAAGAAATTACTTTTACCAtgctgc                                 <  2:4052790/140‑1 (MQ=255)

                                                                                                       taGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCAACAACGCGGTTAGAGTAGCCGCTTTCGTTATCGTACCAAGAAATTACTTTTACCAtgctgc                                 <  2:4406502/140‑1 (MQ=255)

                                                                                                       taGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCAACAACGCGGTTAGAGTAGCCGCTTTCGTTATCGTACCAAGAAATTACTTTTACCAtgctgc                                 <  1:1609405/140‑1 (MQ=255)

                                                                                                       taGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCAACAACGCGGTTAGAGTAGCCGCTTTCGTTATCGTACCAAGAAATTACTTTTACCAtgctgc                                 <  2:5386464/140‑1 (MQ=255)

                                                                                                       taGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCAACAACGCGGTTAGAGTAGCCGCTTTCGTTATCGTACCAAGAAATTACTTTTACCAtgctgc                                 <  1:2503433/140‑1 (MQ=255)

                                                                                                       taGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCAACAACGCGGTTAGAGTAGCCGCTTTCGTTATCGTACCAAGAAATTACTTTTACCAtgctgc                                 <  1:2000438/140‑1 (MQ=255)

                                                                                                       taGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCAACAACGCGGTTAGAGTAGCCGCTTTCGTTATCGTACCAAGAAATTACTTTTACCAtgctgc                                 <  1:1176533/140‑1 (MQ=255)

                                                                                                       taGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCAACAACGCGGTTAGAGTAGCCGCTTTCGTTATCGTACCAAGAAATTACTTTTACCAtgctgc                                 <  2:3054350/140‑1 (MQ=255)

                                                                                                       taGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCAACAACGCGGTTAGAGTAGCCGCTTTCGTTATCGTACCAAGAAATTACTTTTACCAtgctgc                                 <  1:4965540/140‑1 (MQ=255)

                                                                                                       taGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCAACAACGCGGTTAGAGTAGCCGCTTTCGTTATCGTACCAAGAAATTACTTTTACCAtgctgc                                 <  1:2663237/140‑1 (MQ=255)

                                                                                                       taGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCAACAACGCGGTTAGAGTAGCCGCTTTCGTTATCGTACCAAGAAATTACTTTTACCAtgctgc                                 <  2:1386269/140‑1 (MQ=255)

                                                                                                       taGCGCGTCTATTCAAAAGAACCAAGTCAGGTCCGCTAGAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCAACACCGCGGTTAGCGTAGCCGCTTTCGTTATCGTACCAAGAAATTACTTTTACCAtgcggc                                 <  2:1799694/140‑1 (MQ=255)

                                                                                                       gaGCGCTTCTATTCACAAGAACCACGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGCTGTAAGCTGCAAGGTCAACAACGCGGTTAGAGTACCCGCTTTCGTTATCGTACCAATAACTTACTTTTACCAtgctgc                                 <  1:2883128/139‑1 (MQ=255)

                                                                                                         gcgcTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGTTCAACAACGCGGTTAGAGTAGCCGCTTTCGTTATCGTACCAAGAAATTACTTTTACCATGCTGCCt                               <  1:2603832/140‑1 (MQ=255)

                                                                                                            cTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCAACAACGCGGTTAGAGTAGCCGCTTTCGTTATCGTACCAAGAAATTACTTTTACCATGCTGCCTTcc                            >  2:1047620/1‑140 (MQ=255)

                                                                                                             ttCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCAACAACGCGGTTAGAGTAGCCGCTTTCGTTATCGTACCAAGAAATTACTTTTACCATGCTGCCTTCCa                           >  1:767705/1‑140 (MQ=255)

                                                                                                              tCTATTCAAAAGAACCAACTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCAACAACGCGGTTAGAGTAGCCGCTTTCGTTATCGTACCAAGAAATTACTTTTACCATGCTGCCTTCCAt                          <  2:3817065/140‑1 (MQ=255)

                                                                                                               cTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCAACAACGCGGTTAGAGTAGCCGCTTTCGTTATCGTACCAAGAAATTACTTTTACCAtgctgc                                 >  1:5630200/1‑132 (MQ=255)

                                                                                                               cTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCAACAACGCGGTTAGAGTAGCCGCTTTCGTTATCGTACCAAGAAATTACTTTTACCATGCTGCCTTCCATa                         >  1:2334399/1‑140 (MQ=255)

                                                                                                               cTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCAACAACGCGGTTAGAGTAGCCGCTTTCGTTATCGTACCAAGAAATTACTTTTACCATGCTGCCTTCCATa                         >  1:4696317/1‑140 (MQ=255)

                                                                                                                tATTCACAAGACCCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCAACAACGCGGTTAGAGTAGCCGCTTTCGTTATCGTACCAAGAAATTACTTTTACCATGCTGCCTTCCATaa                        <  2:51669/140‑1 (MQ=255)

                                                                                                                tATTCAAAATAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCAACAACGCGGTTAGAGTAGCCGCTTTCGTTATCGTACCAAGAAATTACTTTTACCATGCTGCCTTCCATaa                        <  2:556915/140‑1 (MQ=255)

                                                                                                                tATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCAACAACGCGGTTAGAGTAGCCGCTTTCGTTATCGTACCAAGAAAGTACTTTTACCATGCTGCCTTCCATaa                        <  2:2843255/140‑1 (MQ=255)

                                                                                                                    cAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCAACAACGCGGTTAGAGTAGCCGCTTTCGTTATCGTACCAAGAAATTACTTTTACCCTGCTGCCTTCCATAACCAt                    <  2:4160347/140‑1 (MQ=255)

                                                                                                                       aaGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCAACAACGCGGTTAGAGTAGCCGCTTTCGTTATCGTACCAAGAAATTACTTTTACCATGCTGCCTTCCATAACCATTGt                 >  2:2768766/1‑140 (MQ=255)

                                                                                                                            ccAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCAACAACGCGGTTAGAGTAGCCGCTTTCGTTATCGTACCAAGAAAt                                                  >  1:5188040/1‑102 (MQ=255)

                                                                                                                                 tCAGGTCCGCTAGAAATTAAAGAACTTTTTTTGCGATGTAAGCTGCAAGGTCAACAACGCGGTTAGAGTAGCCGCTTTCGTTATCGTACCAAGAAATTACTTTTCCCATGCTGCCTTCCATAACCATTGTAGAAAGAGCa       <  2:3423653/140‑1 (MQ=255)

                                                                                                                                     gTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCAACAACGCGGTTAGAGTAGCCGCTTTCGTTATCGTACCAAGAAATTACTTTTACCATGCTGCCTTCCATAACCATTGTAGAAAGAGCATCGa   >  1:4476252/1‑140 (MQ=255)

                                                                                                                                      tCCtttttcagctataaattaaagacctttttttgcgatgtaagctgcaaggtcaacaacgcggttagagtagccgctttcgttatcgtaccaagagattacttttaccatgctgccttccataaccattgtagaaagag  >  1:5219392‑M1/1‑3 (MQ=255)

CTAAAAACGCGGTCGTTTCTCTATCACAGAACGTTTTCTGAAAGCCGGTCTTCATGGAAAAAGGGAAAGGGAGTCCGTCCCCTTCCCTTGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCAACAACGCGGTTAGAGTAGCCGCTTTCGTTATCGTACCAAGAAATTACTTTTACCATGCTGCCTTCCATAACCATTGTAGAAAGAGCATCGAT  >  NZ_CP034943/3299466‑3299739

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.