| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP034943 | 2071641 = | 101 (0.620) | 31 (0.190) | 5/264 | 8.1 | 23.9% | coding (2652/7377 nt) | EO946_RS10385 | NTTRR‑F1 domain |
| ? | NZ_CP034943 | = 2072009 | NA (NA) | coding (2284/7377 nt) | EO946_RS10385 | NTTRR‑F1 domain | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
AACGGGAGAAACAGGATCAACCGGAGCAACTGGAGTAACTGGAGCAACGGGAGAAACAGGATCAACAGGTCCATCGGGATCAACAGGATCAACCGGAGCCACTGGAGCGACGGGAGAAACAGGATCAACAGGATCAACAGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NZ_CP034943/2071782‑2071641‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggaGCCACTGGAGTAACTGGTGCAACCGGGGAAACTGGAGCTACAGGACCAACAGGTCCAACGGGAGCAACTGGTGCGACGGGAGCAACGGGAGCAACGGGAGCAACCGGATCAACCGGAGCAACGGGATCAACAGGAGCCA < NZ_CP034943/2072009‑2071871 AACGGGAGAAACAGGATCAACCGGAGCAACTGGAGTAACTGGAGCAACGGGAGAAACAGGATCAACAGGTCCATCGGGATCAACAGGATCAACCGGAGCCACTGGAGCGACGGGAGAAACAGGATCAACAGGATCAACAG > 2:1117438/1‑140AACGGGAGAAACAGGATCAACCGGAGCAACTGGAGTAACTGGAGCAACGGGAGAAACAGGATCAACAGGTCCATCGGGATCAACAGGATCAACCGGAGCCACTGGAGCGACGGGAGAAACAGGATCAACAGGATCAACAG < 1:936520/140‑1 ACGGGAGAAACAGGATCAACCGGAGCAACTGGAGTAACTGGATCAACGGGAGACACAGGATGAACTGGTGCATCTGGATCAACAGGATCAACCGGAGCCACTGGAGCGACGGGAGAAACAGGATCAACAGGATCAACAGG < 2:469595/140‑1 ACGGGAGAAACAGGATCAACCGGAGCAACTGGAGTAACTGGAGCAACGGGAGAAACAGGATCAACAGGTCCATCGGGATCAACAGGATCAACCGGAGCCACTGGAGCGACGGGAGAAACAGGATCAACAGGATCAACAGG < 2:2144809/140‑1 GGAGAAACAGGATCAACCGGAGCAACTGGAGTAACTGGAGCAACGGGAGAAACAGGATCAACAGGTCCATCGGGATCAACAGGATCAACCGGAGCCACTGGAGCGACGGGAGAAACAGGATCAACAGGATCAACAGGAGC > 2:1894932/1‑140 GGAGAAACAGGATCAACCGGAGCAACTGGAGTAACTGGAGCAACGGGAGAAACAGGATCAACAGGTCCATCGGGATCAACAGGATCAACCGGAGCCACTGGAGCGACGGGAGAAACAGGATCAACAGGATCAACAGGAGC > 1:1514490/1‑140 GGAGAAACAGGATCAACCGGAGCAACTGGAGTAACTGGAGCAACGGGAGAAACAGGATCAACAGGTCCATCGGGATCAACAGGATCAACCGGAGCCACTGGAGCGACGGGAGAAACAGGATCAACAGGATCAACAGGAGC > 1:237884/1‑140 AGAAACAGGATCAACCGGAGCAACTGGAGTAACTGGAGCAACGGGAGAAACAGGATCAACAGGTCCATCGGGATCAACAGGATCAACCGGAGCCACTGGAGCGACGGGAGAAACAGGATCAACAGGATCAACAGGAGCCA < 1:175030/140‑1 gacACAGGATCAACCGGCGCAACGGGAGTACCGGGAGCAACGGGAGAAACAGGATCAACAGGTCCATCGGGATCAACAGGATCAACCGGAGCCACTGGAGCGACGGGAGAAACAGGATCAACAGGATCAACAGGAGCCAC < 1:1332492/137‑1 GAAACAGGATCAACCGGAGCAACTGGAGTAACTGGAGCAACGGGAGAAACAGGATCAACAGGTCCATCGGGATCAACAGGATCAACCGGAGCCACTGGAGCGACGGGAGAAACAGGATCAACAGGAGCACCTGGAGCCAC > 2:1546812/1‑140 GATCAACCGGAGCAACTGGAGTAACTGGAGCAACGGGAGAAACAGGATCAACAGGTCCATCGGGATCAACAGGATCAACCGGAGCCACTGGAGCGACGGGAGAAACAGGATCAACAGGATCAACAGGAGCCACTGGAGTA > 2:989929/1‑140 GATCAACCGGAGCAACTGGAGTAACTGGAGCAACGGGAGAAACAGGATCAACAGGTCCATCGGGATCAACAGGATCAACCGGAGCCACTGGAGCGACGGGAGAAACAGGATCAACAGGATCAACAGGAGCCACTGGAGTA > 1:956700/1‑140 ACCGGAGCAACTGGAGTAACTGGAGCAACGGGAGACACAGGATCAACAGGTCCATCGGGATCAACAGGATCACCCGGAGCCAGGGGAGCGACGGGAGCAACAGGATCCACAGGATCACCAGGTGCCCGTGGAGTACCTGG > 1:1977610/1‑140 ACCGGAGCAACTGGAGTAACTGGAGCAACGGGAGAAACAGGATCAACAGGTCCATCGGGATCAACAGGATCAACCGGAGCCACTGGAGCGACGGGAGAAACCGGATCAACAGGATCAACAGGAGCCACGGGAGTAACTGG > 1:463002/1‑140 ACCGGAGCAACTGGAGTAACTGGAGCAACGGGAGAAACAGGATCAACAGGTCCATCGGGATCAACAGGATCAACCGGAGCCACTGGAGCGACGGGAGAAACAGGATCAACAGGATCAACAGGAGCCACTGGAGTAACTGG > 2:147707/1‑140 ACCGGAGCAACTGGAGTAACTGGAGCAACGGGAGAAACAGGATCAACAGGTCCATCGGGATCAACAGGATCAACCGGAGCCACTGGAGCGACGGGAGAAACAGGATCAACAGGATCAACAGGAGCCACTGGAGTAACTGG > 2:144672/1‑140 ACCGGAGCAACTGGAGTAACTGGAGCAACGGGAGAAACAGGATCAACAGGTCCATCGGGATCAACAGGATCAACCGGAGCCACTGGAGCGACGGGAGAAACAGGATCAACAGGATCAACAGGAGCCACTGGAGTAACTGG > 1:2396462/1‑140 CGGAGCAACTGGAGTAACTGGAGCAACGGGAGAAACAGGATCAACAGGTCCATCGGGATCAACAGGATCAACCGGAGCCACTGGAGCGACGGGAGAAACAGGATCAACAGGATCAACAGGAGCCACTGGAGTAACTGGTG < 1:2372069/140‑1 AGCAACTGGAGTAACTGGAGCAACGGGAGAAACAGGATCAACAGGTCCATCGGGATCAACAGGATCAACCGGAGCCACTGGAGCGACGGGAGAAACAGGATCAACAGGATCACCAGGAGCCACTGGAGTAACTGGTGCAc > 1:1041568/1‑139 AGCAACTGGAGTAACTGGAGCAACGGGAGAAACAGGATCAACAGGTCCATCGGGATCAACAGGATCAACCGGAGCCACTGGAGCGACGGGAGAAACAGGATCAACAGGATCAACAGGAGCCACTGGAGTCACTGGTGCAA > 2:246725/1‑140 AGCAACTGGAGTAACTGGAGCAACGGGAGAAACAGGATCAACAGGTCCATCGGGATCAACAGGATCAACCGGAGCCACTGGAGCGACGGGAGAAACAGGATCAACAGGATCAACAGGAGCCACTGGAGTAACTGGTGCca > 2:188873/1‑138 AGCAACTGGAGTAACTGGAGCAACGGGAGAAACAGGATCAACAGGTCCATCGGGATCAACAGGATCAACCGGAGCCACTGGAGCGACGGGAGAAACAGGATCAACAGGATCAACAGGAGCCACTGGAGTAACTGGTGCAc > 2:2366440/1‑139 AGCAACTGGAGTAACTGGAGCAACGGGAGAAACAGGATCAACAGGTCCATCGGGATCAACAGGATCAACCGGAGCCACTGGAGCGACGGGAGAAACAGGATCAACAGGATCAACAGGAGCCACTGGAGTAACTGGTGCAA > 1:487067/1‑140 AGCAACTGGAGTAACTGGAGCAACGGGAGAAACAGGATCAACAGGTCCATCGGGATCAACAGGATCAACCGGAGCCACTGGAGCGACGGGAGAAACAGGATCAACAGGATCAACAGGAGCCACTGGAGTAACTGGTGCAA > 1:1257086/1‑140 AGCAACTGGAGTAACTGGAGCAACGGGAGAAACAGGATCAACAGGTCCATCGGGATCAACAGGATCAACCGGAGCCACTGGAGCGACGGGAGAAACAGGATCAACAGGATCAACAGCAGCCACGGGAGTACCTGGTGCAc > 2:1933949/1‑139 GAGTAACTGGAGCAACGGGAGAAACAGGATCAACAGGTCCATCGGGATCAACAGGATCAACCGGAGCCACTGGAGCGACGGGAGAAACAGGATCAACAGGATCAACAGGAGCCACTGGAGTAACTGGTGCAACCGGGGAA > 1:2369080/1‑140 GTAACTGGAGCAACGGGAGAAACAGGATCAACAGGTCCATCGGGATCAACAGGATCAACCGGAGCCACTGGAGCGACGGGAGAAACAGGATCAACAGGATCAACAGGAGCCACTGGAGTAACTGGTGCAACCGGGGAAAC < 1:1412345/140‑1 ACTGGAGCAACGGGAGAAACAGGATCAACAGGTCCATCGGGATCAACAGGATCAACCGGAGCCACTGGAGCGACGGGAGAAACAGGATCAACAGGATCAACAGG < 2:646286/104‑1 ACTGGAGCAACGGGAGAAACAGGATCAACAGGTCCATCGGGATCAACAGGATCAACCGGAGCCACTGGAGCGACGGGAGAAACAGGATCAACAGGATCAACAGG > 1:646286/1‑104 AGCAACGGGAGAAACAGGATCAACAGGTCCATCGGGATCAACAGGATCAACCGGAGCCACTGGAGCGACGGGAGAAACAGGATCAACAGGATCAACAGGAGCCA > 2:2036802/1‑104 AGCAACGGGAGAAACAGGATCAACAGGTCCATCGGGATCAACAGGATCAACCGGAGCCACTGGAGCGACGGGAGAAACAGGATCAACAGGATCAACAGGAGCCA < 1:2036802/104‑1 acggtTCAACAGGTCCATCGGGATCAACTGGATCAACCGGAGCCACTGGAGTCACGGGAGAAACAGGATCAACAGGATCAACAGGAGCCACTGGAGTAACTGGTGCAACCGGGGAAACTGGCGCAACGGGACCAACAGGT < 2:1699014/135‑1 TCCATCGGGATCAACAGGATCAACCGGAGCCACTGGAGCGACGGGAGAAACAGGATCAACAGGATCAACAGGAGCCACGGGAGTAACTGGTGCAACCGGGGAAACTGGAGCAACAGGACCAACAGGTCCAACGGGAGCca > 1:1699014/1‑138 TGGAGCGACGGGAGAAACAGGATCAACAGGATCAACAGG > 1:1696315/1‑39 TGGAGCGACGGGAGAAACAGGATAAACAGGATCAACAGG < 2:1696315/39‑1 AGAAACAGGATCAACAGGATCAACAGGAGCCACTGGAGTAA < 1:1590789/41‑1 AGAAACAGGATCAACAGGATCAACAGGAGCCACTGGAGTAA > 2:1590789/1‑41 tctACAGGATCACCGGGAGCCTATGGAGTAACTGGTGGATCCGGGGAAACTGGAGGTACTGGAACAACCGCTCCAACGGGAGCAACTGGAGCGACGGGAGCAACGGGAGCAACGGGAGCAACCGGATCAACCGGAGCAAC < 2:791921/137‑1 AACAGGAGCAACGGGATCAACTGGTGCAACCGGGGAAACAGGAGCTACAGGACCAACAGGTCCAACGGGAGCAACTGGTGCGACGGGAGCAACGGGAGCAACGGGAGCAACCGGATCAACCGGAGCAACGGGATCAACAG > 2:523946/1‑140 GAGCCACTGGAGTAACTGGTGCAACCGGGGAAACTGGAGCTACAGGACCAACAGGTCCAACGGGAGCAACTGGTGCGACGGGAGCAACGGGAGCAACGGGAGCAACCGGATCAACCGGAGCAACGGGATCAACAGGAGCC < 1:1844475/140‑1 AGCCACTGGAGTCACTGGTGGAACCGGGGAAACTGGAGCTACAGGACCAACAGGTCCAACGGGAGCAACTGGTGCGACGGGAGCAACGGGAGCAACGGGAGCAACCGGATCAACCGGAGCAACGGGATCAACAGGAGCCA < 2:2020153/140‑1 AGCCACTGGAGTAACTGGTGCAACCGGGGAAACTGGAGCTACAGGACCAACAGGTCCAACGGGAGCAACTGGTGCGTCGGGAGCAACGGGAGCAACGGGAGCAACCGGATCAACCGGAGCAACGGGATCAACAGGAGCCA < 2:900437/140‑1 AGCCACTGGAGTAACTGGTGCAACCGGGGAAACTGGAGCTACAGGACCAACAGGTCCAACGGGAGCAACTGGTGCGACGGGAGCAACGGGAGCAACGGGAGCAACCGGATCAACCGGAGCAACGGGATCAACAGGAGCCA < 1:49400/140‑1 AGCCACTGGAGTAACTGGTGCAACCGGGGAAACTGGAGCTACAGGACCAACAGGTCCAACGGGAGCAACTGGTGCGACGGGAGCAACGGGAGCAACGGGAGCAACCGGATCAACCGGAGCAACGGGATCAACAGGAGCCA < 1:1817107/140‑1 AGCCACTGGAGTAACTGGTGCAACCGGGGAAACTGGAGCTACAGGACCAACAGGTCCAACGGGAGCAACTGGTGCGACGGGAGCAACGGGAGCAACGGGAGCAACCGGATCAACCGGAGCAACGGGATCAACAGGAGCCA < 1:2297785/140‑1 AGCCACTGGAGTAACTGGTGCAACCGGGGAAACTGGAGCTACAGGACCAACAGGTCCAACGGGAGCAACTGGTGCGACGGGAGCAACGGGAGCAACGGGAGCAACCGGATCAACCGGAGCAACGGGATCAACAGGAGCCA > 1:2399628/1‑140 AGCCACTGGAGTAACTGGTGCAACCGGGGAAACTGGAGCTACAGGACCAACAGGTCCAACGGGAGCAACTGGTGCGACGGGAGCAACGGGAGCAACGGGAGCAACCGGATCAACCGGAGCAACGGGATCAACAGGAGCCA < 1:300047/140‑1 AGCCACTGGAGTAACTGGTGCAACCGGGGAAACTGGAGCTACAGGACCAACAGGTCCAACGGGAGCAACTGGTGCGACGGGAGCAACGGGAGCAACGGGAGCAACCGGATCAACCGGAGCAACGGGATCAACAGGAGCCA < 1:1099222/140‑1 AGCCACTGGAGTAACTGGTGCAACCGGGGAAACTGGAGCTACAGGACCAACAGGTCCAACGGGAGCAACTGGTGCGACGGGAGCAACGGGAGCAACGGGAGCAACCGGATCAACCGGAGCAACGGGATCAACAGGAGCCA < 2:291452/140‑1 AGCCACTGGAGTAACTGGTGCAACCGGGGAAACTGGAGCTACAGGACCAACAGGTCCAACGGGAGCAACTGGTGCGACGGGAGCAACGGGAGCAACGGGAGCAACCGGATCAACCGGAGCAACGGGATCAACAGGAGCCA > 1:378550/1‑140 AGCCACTGGAGTAACTGGTGCAACCGGGGAAACTGGAGCTACAGGACCAACAGGTCCAACGGGAGCAACTGGTGCGACGGGAGCAACGGGAGCAACGGGAGCAACCGGATCAACCGGAGCAACGGGATCAACAGGAGCCA < 2:2409300/140‑1 AGCCACTGGAGTAACTGGTGCAACCGGGGAAACTGGAGCTACAGGACCAACAGGTCCAACGGGAGCAACTGGTGCGACGGGAGCAACGGGAGCAACGGGAGCAACCGGATCAACCGGAGCAACGGGATCAACAGGAGCCA < 2:1549340/140‑1 AGCCACTGGAGTAACTGGTGCAACCGGGGAAACTGGAGCTACAGGACCAACAGGTCCAACGGGAGCAACTGGTGCGACGGGAGCAACGGGAGCAACGGGAGCAACCGGATCAACCGGAGCAACGGGATCAACAGGAGCCA < 2:224385/140‑1 AGCCACTGGAGTAACTGGTGCAACCGGGGAAACTGGAGCTACAGGACCAACAGGTCCAACGGGAGCAACTGGTGCGACGGGAGCAACGGGAGCAACGGGAGCAACCGGATCAACCGGAGCAACGGGATCAACAGGAGCCA < 2:2207576/140‑1 AGCCACTGGAGTAACTGGTGCAACCGGGGAAACTGGAGCTACAGGACCAACAGGTCCAACGGGAGCAACTGGTGCGACGGGAGCAACGGGAGCAACGGGAGCAACCGGATCAACCGGAGCAACGGGATCAACAGGAGCCA < 1:778127/140‑1 AGCCACTGGAGTAACTGGTGCAACCGGGGAAACTGGAGCTACAGGACCAACAGGTCCAACGGGAGCAACTGGTGCGACGGGAGCAACGGGAGCAACGGGAGCAACCGGATCAACCGGAGCAACGGGATCAACAGGAGCCA < 1:1576200/140‑1 AGCCACTGGAGTAACTGGTGCAACCGGGGAAACTGGAGCTACAGGACCAACAGGTCCAACGGGAGCAACTGGTGCGACGGGAGCAACGGGAGCAACGGGAGCAACCGGATCAACCGGAGCAACGGGATCAACAGGAGCCA < 2:1543571/140‑1 AGCCACTGGAGTAACTGGTGCAACCGGGGAAACTGGAGCTACAGGACCAACAGGTCCAACGGGAGCAACTGGTGCGACGGGAGCAACGGGAGCAACGGGAGCAACCGGATCAACCGGAGCAACGGGATCAACAGGAGCCA < 1:1481304/140‑1 AGCCACTGGAGTAACTGGTGCAACCGGGGAAACTGGAGCTACAGGACCAACAGGTCCAACGGGAGCAACTGGTGCGACGGGAGCAACGGGAGCAACGGGAGCAACCGGATCAACCGGAGCAACGGGATCAACAGGAGCCA < 2:1884564/140‑1 AGCCACTGGAGTAACTGGTGCAACCGGGGAAACTGGAGCTACAGGACCAACAGGTCCAACGGGAGCAACGGGTGCGACGGGAGCAACGGGAGCAACGGGAGCAACCGGATCAACCGGAGCAACGGGATCAACAGGAGCCA > 1:63851/1‑140 AACGGGAGAAACAGGATCAACCGGAGCAACTGGAGTAACTGGAGCAACGGGAGAAACAGGATCAACAGGTCCATCGGGATCAACAGGATCAACCGGAGCCACTGGAGCGACGGGAGAAACAGGATCAACAGGATCAACAGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NZ_CP034943/2071782‑2071641‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggaGCCACTGGAGTAACTGGTGCAACCGGGGAAACTGGAGCTACAGGACCAACAGGTCCAACGGGAGCAACTGGTGCGACGGGAGCAACGGGAGCAACGGGAGCAACCGGATCAACCGGAGCAACGGGATCAACAGGAGCCA < NZ_CP034943/2072009‑2071871 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |