| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009974 | = 1156906 | 0 (0.000) | 274 (1.310) +TTGTGCGGGATTCAGTTCGATGCTGAAGCTGCCATCGGCGTTGGCAATGGCACTGCCAATCAA |
89/174 | 2.6 | 73.5% | intergenic (+429/‑14854) | RPPX_05120/RPPX_05130 | hypothetical protein/channel protein TolC |
| ? | CP009974 | = 1160812 | 343 (0.940) | intergenic (+4335/‑10948) | RPPX_05120/RPPX_05130 | hypothetical protein/channel protein TolC | |||||
Only 100 of 280 total aligned reads displayed.
TCGGCGCGGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCCTGAGGCGGGTCGAGGGTGACGGTGAAGCTGCCGGCGGGGCCCCCAACCCCCCCCCCGCCCCGGACATCGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGCCAGCCCGAGCAATCTGGCCATCGATCCT > CP009974/1156828‑1157047 | cgggcgCGGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgtt < 1:5530416‑M1/149‑73 (MQ=255)cgggcgCGGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgcca < 1:3430512‑M1/135‑59 (MQ=255) gggcGGGGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttg < 1:791872‑M1/150‑74 (MQ=255) gggcGCGGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttg > 2:3325981‑M1/2‑78 (MQ=255) gggcGCGGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttg > 1:2130153‑M1/2‑78 (MQ=255) gggcGCGGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttg < 2:1417390‑M1/150‑74 (MQ=255) gcgcGGTGGGCGGTGCGGGGAGCGAGGAAGCGCCGGCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCttgtgccggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccggtggc < 2:5956447‑M1/151‑76 (MQ=255) gcgcGGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttggc > 1:2184391‑M1/1‑76 (MQ=255) gcgcGGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttggc < 2:1240557‑M1/151‑76 (MQ=255) cgcgGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttggca > 2:4228372‑M1/1‑75 (MQ=255) cgcgGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttggca > 1:457305‑M1/1‑75 (MQ=255) gcgGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGTCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttggcat > 1:933537‑M1/1‑74 (MQ=255) gcgGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttggcat > 2:3430963‑M1/1‑74 (MQ=255) gcgGGGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttgccac > 2:5981553‑M1/1‑74 (MQ=255) gggtGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttggcatc < 1:5626951‑M1/150‑79 (MQ=255) gggggagctgtgcggGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttggcatc < 2:765776‑M1/144‑79 (MQ=255) cgGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgtcatcggcgttggcaatggcactgccaatcaacgtgccgttggcatc > 2:6323200‑M1/1‑73 (MQ=255) ngtGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttggcatca > 1:3525026‑M1/2‑72 (MQ=255) ggTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttggcatca > 2:1754033‑M1/1‑72 (MQ=255) ggTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttggcatca > 1:4227566‑M1/1‑72 (MQ=255) ggTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttggcatca > 1:4662300‑M1/1‑72 (MQ=255) gTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttggcatcat > 2:1169615‑M1/1‑71 (MQ=255) gTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttggcatcat < 1:1077807‑M1/151‑81 (MQ=255) gATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttggcatcatgc > 2:5805378‑M1/1‑69 (MQ=255) gATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttggcatcatgc < 1:6241375‑M1/151‑83 (MQ=255) gATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttggcatcatgc > 2:2183001‑M1/1‑69 (MQ=255) gATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttggcatcatgc > 2:2514124‑M1/1‑69 (MQ=255) gATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgctggcatcatgc > 2:4899716‑M1/1‑69 (MQ=255) tCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttggcatcatgcac < 2:3871722‑M1/151‑85 (MQ=255) cTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGAGCACGTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttggcatcatgcact < 2:1338665‑M1/151‑86 (MQ=255) cTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttggcatcatgcacc > 2:6507530‑M1/1‑66 (MQ=255) tgtgCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttggcatcatgcactt > 1:5925391‑M1/1‑65 (MQ=255) tgtgCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttggcatcatgcactt < 2:860386‑M1/151‑87 (MQ=255) tgtgCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttggcatcatgcacct < 1:2951608‑M1/151‑87 (MQ=255) gtgCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttggcatcatgcacctc < 1:2983394‑M1/151‑88 (MQ=255) gCGGGCAGCGAGGAATCGCCGCCGTTATCGATGGCGCCCACGTCGCGCGGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcgacgtgccgttggcatcatgcacttcca < 2:4481869‑M1/151‑90 (MQ=255) gCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttggcatcatgcacttcca > 1:3544433‑M1/1‑62 (MQ=255) gCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttggcatcatgcacctcca < 1:6593487‑M1/151‑90 (MQ=255) gCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttggcatcatgcacctcca < 2:2321395‑M1/151‑90 (MQ=255) gggCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttggcatcatgcacctccaca > 1:6912063‑M1/1‑60 (MQ=255) ggCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttggcatcatgcacttccacac > 1:6990779‑M1/1‑59 (MQ=255) ggCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttggcatcatgcacttccacac < 2:2300996‑M1/151‑93 (MQ=255) ggCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttggcatcatgcacttccacac < 2:915517‑M1/151‑93 (MQ=255) ggCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttggcatcatgcacctccacac < 1:6753337‑M1/151‑93 (MQ=255) ggCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttggcatcatgcacctccacac > 2:1366553‑M1/1‑59 (MQ=255) cAGCGAGGAAACGCGGGCGTCGTGGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttggcatcatgcacctccacacgg < 2:223‑M1/151‑95 (MQ=255) cAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttggcatcatgcacttccacacgg > 1:4061274‑M1/1‑57 (MQ=255) cAGCGAGGAAACGCCGCCGGCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttggcatcatgcacctccacacgg < 2:4826562‑M1/151‑95 (MQ=255) gCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttggcatcatgcacttccacacggct < 1:5336631‑M1/151‑97 (MQ=255) gCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttggcatcatgcacttccacacggct < 2:5323809‑M1/151‑97 (MQ=255) cGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttggcatcatgcacttccacacggctg < 2:1898440‑M1/151‑98 (MQ=255) cGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttggcatcatgcacttccacacggctg < 2:2591708‑M1/151‑98 (MQ=255) gAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttggcatcatgcacttccacacggctgc > 2:1929865‑M1/1‑53 (MQ=255) gAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttggcatcatgcacttccacacggctgc > 1:5816900‑M1/1‑53 (MQ=255) gAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatca > 2:2056639‑M1/1‑53 (MQ=255) ggAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttggcatcatgcacctccacacggctgcca > 1:5119280‑M1/1‑51 (MQ=255) ggAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttggcatcatgcacctccacacggctgcca > 2:4738660‑M1/1‑51 (MQ=255) ggAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttggcatcatgcacctccacacggctgcca > 1:4311693‑M1/1‑51 (MQ=255) gAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttggcatcatgcacttccacacggctgccag > 1:6234005‑M1/1‑50 (MQ=255) aaCGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttggcatcatgcacttccacacggctgccagca > 2:3068898‑M1/1‑48 (MQ=255) aaCGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttggcatcatgcacctccacacggctgccagca > 1:2678278‑M1/1‑48 (MQ=255) aCGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttggcatcatgcacttccacacggctgccagcag > 1:3289214‑M1/1‑47 (MQ=255) aCGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttggcatcatgcacttccacacggctgccagcag < 2:3746293‑M1/151‑105 (MQ=255) aCGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttggcatcatgcacttccacacggctgccagcag < 1:3753389‑M1/151‑105 (MQ=255) aCGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttagcatcatgcacttccacacggctgccagcaa > 1:3289970‑M1/1‑47 (MQ=255) cgccgcCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttggcatcatgcacttccacacggctgccagcagg < 1:573111‑M1/151‑106 (MQ=255) cgccgcCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttggcatcatgcacctccacacggctgccagcagg > 1:1617086‑M1/1‑46 (MQ=255) gccgccGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttggcatcatgcacttccacacggctgccagcaggc < 1:2066127‑M1/151‑107 (MQ=255) gccgccGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttggcatcatgcacttccacacggctgccagcaggc > 2:2044152‑M1/1‑45 (MQ=255) cgccgTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttggcatcatgcacttccacacggctgccagcaggcgg > 2:5722120‑M1/1‑43 (MQ=255) cgccgTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttggcatcatgcacctccacacggctgccagcaggcgc > 1:192581‑M1/1‑43 (MQ=255) cgccgTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttggcatcatgcacctccacacggctgccagcaggcgc > 1:3413621‑M1/1‑43 (MQ=255) cgccgTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCttgggc > 1:1413429‑M1/1‑43 (MQ=255) gccgTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttggcatcatgcacttccacacggctgccagcaggcgcg < 1:2319215‑M1/151‑110 (MQ=255) gccgTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttggcatcatgcacttccacacggctgccagcaggcgcg > 1:6487252‑M1/1‑42 (MQ=255) gccgTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttggcatcacgcacctccacactgctgccagcacgcgcg > 2:519488‑M1/1‑42 (MQ=255) ccgTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttggcatcatgcacttccacacggctgccagcaggcgcgg > 2:6756037‑M1/1‑41 (MQ=255) cgTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttggcatcatgcacttccacacggctgccagcaggcgcggt > 2:5645105‑M1/1‑40 (MQ=255) cgTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttggcatcatgcacttccacacggctgccagcaggcgcggt > 1:3191457‑M1/1‑40 (MQ=255) gTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCttgtgtcggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttggcatcatgcacctccacacggctgccagcaggcgcggta < 2:5582440‑M1/151‑113 (MQ=255) gTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttggcatcatgcacttccacacggctgccagcaggcgcggta < 1:7221911‑M1/151‑113 (MQ=255) gTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttggcatcatgcacctccacacggctgccagccggcgcggta > 2:3479957‑M1/1‑39 (MQ=255) gTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttggcatcatgcacctccacacggctgccagcaggcgcggta < 2:1812430‑M1/151‑113 (MQ=255) gTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttggcatcatgcacctccacacggctgccagcaggcgcggta > 1:411583‑M1/1‑39 (MQ=255) gTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttggcatcatgcacctccacacggctgccagcaggcgcggta > 2:1543938‑M1/1‑39 (MQ=255) tCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttggcatcatgcacctccacacggctgccagcaggcgcggtac > 2:4315460‑M1/1‑38 (MQ=255) aTGGCGACCACGTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttggcatcatgcacttccacacggctgccagcaggcgcggtaccggtga < 2:4012767‑M1/151‑120 (MQ=255) aTGGCGACCACGTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttggcatcatgcacctccacacggctgccagcaggcgcggtaccggtga > 2:2786919‑M1/1‑32 (MQ=255) gCGACCACGTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttggcatcatgcacttccacacggctgccagcaggcgcggtaccggtgaggg > 2:362678‑M1/1‑29 (MQ=255) gTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttggcatcatgcacttccacacggctgccagcaggcgcggtaccggtgagggtggtgcca > 1:6104023‑M1/1‑21 (MQ=255) gTCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttggcatcatgcacttccacacggctgccagcaggcgcggtaccggtgagggtggtgcca > 1:4970682‑M1/1‑21 (MQ=255) tCCAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttggcatcatgcacctccacacggctgccagcaggcgcggtaccggtgagggtggtgccat < 2:2630042‑M1/151‑132 (MQ=255) ccAGCAGTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttggcatcatgcacttccacacggctgccagcaggcgcggtaccggtgagggtggtgccatc > 2:6073450‑M1/1‑19 (MQ=255) cagcagTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttggcatcatgcacttccacacggctgccagcaggcgcggtaccggtgagggtggtgccatcc > 2:466213‑M1/1‑18 (MQ=255) gcagTTCGCCGTTGGCttgtgcgggattcaggtcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttggcatcatgcacttccacacggctgccagcaggcgcggtaccggtgagggtggtgccatcagc < 2:1408879‑M1/151‑136 (MQ=255) cagTTCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttggcatcatgcacctccacacggctgccagcaggcgcggtaccggtgagggtggtgccatcagga > 2:6860743‑M1/1‑15 (MQ=255) gTTCGCGGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcattggcaatggcactgccaatcaacgtgccgttggcatcatgcacctccacacggctgccagcaggcgcggtaccggtgagggtggtgccatcaggatc < 2:7153250‑M1/151‑139 (MQ=255) ttCGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttggcatcatgcacttccacacggctgccagcaggcgcggtaccggtgagggtggtgccatcagcatcg < 1:6336557‑M1/151‑140 (MQ=255) tCGCCGTTGGCttgggcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttggcatcatgcacttccacacggctgccagcaggcgcggtaccggtgagggtggtgccatcagcatctg > 2:1654495‑M1/1‑11 (MQ=255) cGCCGTTGGCttgtgcgggattcagttcgatgctgaagctgccatcggcgttggcaatggcactgccaatcaacgtgccgttggcatcatgcacttccacacggctgccagcaggcgcggtaccggtgagggtggtgccatcagcatcgat < 1:2419979‑M1/151‑142 (MQ=255) | TCGGCGCGGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCCTGAGGCGGGTCGAGGGTGACGGTGAAGCTGCCGGCGGGGCCCCCAACCCCCCCCCCGCCCCGGACATCGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGCCAGCCCGAGCAATCTGGCCATCGATCCT > CP009974/1156828‑1157047 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |