| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC MC JC | CP009974 | 5,798,527 | Δ2,603 bp | intergenic (‑15/–) | RPPX_25885 ← / – | integrase/– |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | CP009974 | 1–2595 | 2595 | 1–2595 | NA [0] | [0] 314 | RPPX_00005–RPPX_00010 | RPPX_00005,RPPX_00010 |
| * | * | ÷ | CP009974 | 5798527 | 5798534 | 8 | 313 [0] | [0] NA | RPPX_25885/– | integrase/– |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009974 | 2596 = | 0 (0.000) | 296 (0.860) | 167/284 | 1.1 | 100% | intergenic (‑203/+211) | RPPX_00010/RPPX_00015 | integrase/peptidase S24 |
| ? | CP009974 | = 5798526 | 0 (0.000) | intergenic (‑14/–) | RPPX_25885/– | integrase/– | |||||
Only 100 of 314 total aligned reads displayed.
GAATAAATCCTGCGTGGCTGCCTGCCAGAAAAGTGTCCGGATGACCGTGGAGTCGGTGTCCGGATGCTCGTGGAATGAGTGTCCGGATCAGCGTGGAATCACTGTCCGGATGCGCGTGGAATGGGTGTCCGAGTCAGCGTGGAATCCGCACACTTCCAATGGATTGCCTTATGAAGCCTGGAAACTGCTGTTCCAGAGGGGTTCAGAAGGTGGCGCGGACTCTACAGGATTTACTAACGATTCCCACCCCTCAGATCGTTGTTGCTCAGTACGATGATCGGCGTCTTGGCCAAGTCGGGC > CP009974/2447‑2746 | tgactcgataagcgtgtgccaaaggaaggattgagctggctcgactggccatccctctgacccaatcagcaacggaaagccttcaaaggatcgacctgctaatgctaggtcttttgttgcgaataccagcctcatgccgctgccctaaaac < 2:4359152‑M1/2‑1 (MQ=255) actcgataagcgtgtgccaaaggaaggattgagctggctcgactggccatccctctgacccaatcagcaacggaaagccttcaaaggatcgacctgctaatgctaggtcttttgttgcgaataccagcctcatgccgctgccctaaaacac > 2:2583801‑M1/148‑151 (MQ=255) ctcgataagcgtgtgccaaaggaaggattgagctggctcgactggccatccctctgacccaatcagcaacggaaagccttcaaaggatcgacctgctaatgctaggtcttttgttgcgaataccagcctcatgccgctgccctaaaACACt < 1:6565464‑M1/5‑1 (MQ=255) tcgataagcgtgtgccaaaggaaggattgagctggctcgactggccatccctctgacccaatcagcaacggaaagccttcaaaggatcgacctgctaatgctaggtcttttgttgcgaataccagcctcatgccgctgccctaaaACACtt < 1:4008791‑M1/6‑1 (MQ=255) tcgataagcgtgtgccaaaggaaggattgagctggctcgactggccatccctctgacccaatcagcaacggaaagccttcaaaggatcgacctgctaatgctaggtcttttgttgcgaataccagcctcatgccgctgccctaaaACACtt > 1:3070692‑M1/146‑151 (MQ=255) cgataagcgtgtgccaaaggaaggattgagctggctcgactggccatccctctgacccaatcagcaacggaaagccttcaaaggatcgacctgctaatgctaggtcttttgttgcgaataccagcctcatgccgctgccctaaaaca < 1:5155034‑M1/3‑1 (MQ=255) cgataagcgtgtgccaaaggaaggattgagctggctcgactggccatccctctgacccaatcagcaacggaaagccttcaaaggatcgacctgctaatgctaggtcttttgttgcgaataccagcctcatgccgctgccctaaaaca > 2:5155034‑M1/145‑147 (MQ=255) cgataagcgtgtgccaaaggaaggattgagctggctcgactggccatccctctgacccaatcagcaacggaaagccttcaaaggatcgacctgctaatgctaggtcttttgttgcgaataccagcctcatgccgctgccctaaaACACTTc > 1:4830560‑M1/145‑151 (MQ=255) cgtgtgccaaaggaaggattgagctggctcgactggccatccctctgacccaatcagcaacggaaagccttcaaaggatcgacctgctaatgctaggtcttttgttgcgaataccagcctcatgccgctgccctaaaACACTTCCAATGGa < 1:5495277‑M1/14‑1 (MQ=255) gtgtgccaaaggaaggattgagctggctcgactggccatccctctgacccaatcagcaacggaaagccttcaaaggatcgacctgctaatgctaggtcttttgttgcgaataccagcctcatgccgctgccctaaaACACTTCCAATGGAt < 2:2704078‑M1/15‑1 (MQ=255) tgtgccaaaggaaggattgagctggctcgactggccatccctctgacccaatcagcaacggaaagccttcaaaggatcgacctgctaatgctaggtcttttgttgcgaataccagcctcatgccgctgccctaaaACACTTCCAATGGAtt < 1:150543‑M1/16‑1 (MQ=255) tgccaaaggaaggattgagctggctcgactggccatccctctgacccaatcagcaacggaaagccttcaaaggatcgacctgctaatgctaggtcttttgttgcgaataccagcctcatgccgctgccctaaaACACTTCCAATGGATTGc < 1:1115992‑M1/18‑1 (MQ=255) caaaggaaggattgagctggctcgactggccatccctctgacccaatcagcaacggaaagccttcaaaggatcgacctgctaatgctaggtcttttgttgcgaataccagcctcatgccgctgccctaaaACACTTCCAATGGATTGCCtt > 1:300616‑M1/131‑151 (MQ=255) caaaggaaggattgagctggctcgactggccatccctctgacccaatcagcaacggaaagccttcaaaggatcgacctgctaatgctaggtcttttgttgcgaataccagcctcatgccgctgccctaaaACACTTCCAATGGATTGCCtt > 2:4092006‑M1/131‑151 (MQ=255) aaggaaggattgagctggctcgactggccatccctctgacccaatcagcaacggaaagccttcaaaggatcgacctgctaatgctaggtcttttgttgcgaataccagcctcatgccgctgccctaaaACACTTCCAATGGATTGCCTTAt < 1:4537195‑M1/23‑1 (MQ=255) aggaaggattgagctggctcgactggccatccctctgacccaatcagcaacggaaagccttcaaaggatcgacctgctaatgctaggtcttttgttgcgaataccagcctcatgccgctgccctaaaACACTTCCAATGGATTGCCTTATg > 1:1786784‑M1/128‑151 (MQ=255) ggaaggattgagctggctcgactggccatccctctgacccaatcagcaacggaaagccttcaaaggatcgacctgctaatgctaggtcttttgttgcgaataccagcctcatgccgctgccctaaaACACTTCCAATGGATTGCCTTATGa > 1:2787439‑M1/127‑151 (MQ=255) gaaggattgagctggctcgactggccatccctctgacccaatcagcaacggaaagccttcaaaggatcgacctgctaatgctaggtcttttgttgcgaataccagcctcatgccgctgccctaaaACACTTCCAATGGATTGCCTTATGaa < 1:424622‑M1/26‑1 (MQ=255) ggattgagctggctcgactggccatccctctgacccaatcagcaacggaaagccttcaaaggatcgacctgctaatgctaggtcttttgttgcgaataccagcctcatgccgctgccctaaaACACTTCCAATGGATTGCCTTATGAAGcc < 2:2383852‑M1/29‑1 (MQ=255) gattgagctggctcgactggccatccctctgacccaatcagcaacggaaagccttcaaaggatcgacctgctaatgctaggtcttttgttgcgaataccagcctcatgccgctgccctaaaACACTTCCAATGGATTGCCTTATGAAGCCt < 1:3572833‑M1/30‑1 (MQ=255) ctggctcgactggccatccctctgacccaatcagcaacggaaagccttcaaaggatcgacctgctaatgctaggtcttttgttgcgaataccagcctcatgccgctgccctaaaACACTTCCAATGGATTGCCTTATGAAGCCTGGAAAct > 1:1896359‑M1/115‑151 (MQ=255) tggctcgactggccatccctctgacccaatcagcaacggaaagccttcaaaggatcgacctgctaatgctaggtcttttgttgcgaataccagcctcatgccgctgccctaaaACACTTCCAATGGATTGCCTTATGAAGCCTGGAAActg < 2:2272473‑M1/38‑1 (MQ=255) gctcgactggccatccctctgacccaatcagcaacggaaagccttcaaaggatcgacctgctaatgctaggtcttttgttgcgaataccagcctcatgccgctgccctaaaACACTTCCAATGGATTGCCTTATGAAGCCTGGAAActgct > 2:7020423‑M1/112‑151 (MQ=255) gctcgactggccatccctctgacccaatcagcaacggaaagccttcaaaggatcgacctgctaatgctaggtcttttgttgcgaataccagcctcatgccgctgccctaaaACACTTCCAATGGATTGCCTTATGAAGCCTGGAAActgct > 1:845124‑M1/112‑151 (MQ=255) cgactggccatccctctgacccaatcagcaacggaaagccttcaaaggatcgacctgctaatgctaggtcttttgttgcgaataccagcctcatgccgctgccctaaaACACTTCCAATGGATTGCCTTATGAAGCCTGGAAACTGCTGtt < 2:5239574‑M1/43‑1 (MQ=255) cgactggccatccctctgacccaatcagcaacggaaagccttcaaaggatcgacctgctaatgctaggtcttttgttgcgaataccagcctcatgccgctgccctaaaACACTTCCAATGGATTGCCTTATGAAGCCTGGAAACTGCTGtt < 1:4405139‑M1/43‑1 (MQ=255) gactggccatccctctgacccaatcagcaacggaaagccttcaaaggatcgacctgctaatgctaggtcttttgttgcgaataccagcctcatgccgctgccctaaaACACTTCCAATGGATTGCCTTATGAAGCCTGGAAACTGCTGTTc < 1:2540210‑M1/44‑1 (MQ=255) gactggccatccctctgacccaatcagcaacggaaagccttcaaaggatcgacctgctaatgctaggtcttttgttgcgaataccagcctcatgccgctgccctaaaACACTTCCAATGGATTGCCTTATGAAGCCTGGAAACTGCTGTTc > 2:191979‑M1/108‑151 (MQ=255) gactggccatccctctgacccaatcagcaacggaaagccttcaaaggatcgacctgctaatgctaggtcttttgttgcgaataccagcctcatgccgctgccctaaaACACTTCCAATGGATTGCCTTATGAAGCCTGGAAACTGCTGTTc < 2:1501910‑M1/44‑1 (MQ=255) actggccatccctctgacccaatcagcaacggaaagccttcaaaggatcgacctgctaatgctaggtcttttgttgcgaataccagcctcatgccgctgccctaaaACACTTCCAATGGATTGCCTTATGAAGCCTGGAAACTGCTGTTcc < 2:1803834‑M1/45‑1 (MQ=255) actggccatccctctgacccaatcagcaacggaaagccttcaaagcatcgacctgctaatgctaggtcttttgttgcgaataccagcctcatgccgctgccctaaaACACTTCCAATGGATTGCCTTATGAAGCCTGGAAACTGCTGTTcc > 2:5595364‑M1/107‑151 (MQ=255) ctggccatccctctgacccaatcagcaacggaaagccttcaaaggatcgacctgctaatgctaggtcttttgttgcgaataccagcctcatgccgctgccctaaaACACTTCCAATGGATTGCCTTATGAAGCCTGGAAACTGCTGTTCCa < 1:4707941‑M1/46‑1 (MQ=255) ctggccatccctctgacccaatcagcaacggaaagccttcaaaggatcgacctgctaatgctaggtcttttgttgcgaataccagcctcatgccgctgccctaaaACACTTCCAATGGATTGCCTTATGAAGCCTGGAAACTGCTGTTCCa > 1:7168777‑M1/106‑151 (MQ=255) tggccatccctctgacccaatcagcaacggaaagccttcaaaggatcgacctgctaatgctaggtcttttgttgcgaataccagcctcatgccgctgccctaaaACACTTCCAATGGATTGCCTTATGAAGCCTGGAAACTGCTGTTCCag > 1:6208455‑M1/105‑151 (MQ=255) ggccatccctctgacccaatcagcaacggaaagccttcaaaggatcgacctgctaatgctaggtcttttgttgcgaataccagcctcatgccgctgccctaaaACACTTCCAATGGATTGCCTTATGAAGCCTGGAAACTGCTGTTCCaga < 1:3652761‑M1/48‑1 (MQ=255) ggccatccctctgacccaatcagcaacggaaagccttcaaaggatcgacctgctaatgctaggtcttttgttgcgaataccagcctcatgccgctgccctaaaACACTTCCAATGGATTGCCTTATGAAGCCTGGAAACTGCTGTTCCaga > 1:1045417‑M1/104‑151 (MQ=255) ggccatccctctgacccaatcagcaacggaaagccttcaaaggatcgacctgctaatgctaggtcttttgttgcgaataccagcctcatgccgctgccctaaaACACTTCCAATGGATTGCCTTATGAAGCCTGGAAACTGCTGTTCCaga < 2:5997348‑M1/48‑1 (MQ=255) atccctctgacccaatcagcaacggaaagccttcaaaggatcgacctgctaatgctaggtcttttgttgcgaataccagcctcatgccgctgccctaaaACACTTCCAATGGATTGCCTTATGAAGCCTGGAAACTGCTGTTCCAGAgggg > 1:6257682‑M1/100‑151 (MQ=255) ctctgacccaatcagcaacggaaagccttcaaaggatcgacctgctaatgctaggtcttttgttgcgaataccagcctcatgccgctgccctaaaACACTTCCAATGGATTGCCTTATGAAGCCTGGAAACTGCTGTTCCAGAGGGGTTCa > 2:5884934‑M1/96‑151 (MQ=255) tctgacccaatcagcaacggaaagccttcaaaggatcgacctgctaatgctaggtcttttgttgcgaataccagcctcatgccgctgccctaaaACACTTCCAATGGATTGCCTTATGAAGCCTGGAAACTGCTGTTCCAGAGGGGTTCAg < 2:7070116‑M1/57‑1 (MQ=255) tctgacccaatcagcaacggaaagccttcaaaggatcgacctgctaatgctaggtcttttgttgcgaataccagcctcatgccgctgccctaaaACACTTCCAATGGATTGCCTTATGAAGCCTGGAAACTGCTGTTCCAGAGGGGTTCAg > 1:5754970‑M1/95‑151 (MQ=255) ctgacccaatcagcaacggaaagccttcaaaggatcgacctgctaatgctaggtcttttgttgcgaataccagcctcatgccgctgccctaaaACACTTCCAATGGATTGCCTTATGAAGCCTGGAAACTGCTGTTCCAGAGGGGTTCAGa > 1:2690369‑M1/94‑151 (MQ=255) gacccaatcagcaacggaaagccttcaaaggatcgacctgctaatgctaggtcttttgttgcgaataccagcctcatgccgctgccctaaaACACTTCCAATGGATTGCCTTATGAAGCCTGGAAACTGCTGTTCCAGAGGGGTTCAGAAg > 1:185983‑M1/92‑151 (MQ=255) gacccaatcagcaacggaaagccttcaaaggatcgacctgctaatgctaggtcttttgttgcgaataccagcctcatgccgctgccctaaaACACTTCCAATGGATTGCCTTATGAAGCCTGGAAACTGCTGTTCCAGAGGGGTTCAGAAg < 1:6701726‑M1/60‑1 (MQ=255) ccaatcagcaacggaaagccttcaaaggatcgacctgctaatgctaggtcttttgttgcgaataccagcctcatgccgctgccctataACACTTCCAATGGCTTGCCTTATGAAGCCTGGAAACTGCTGTTCCAGAGGGGCTCAGAAGGTg < 2:6945917‑M1/63‑1 (MQ=255) atcagcaacggaaagccttcaaaggatcgacctgctaatgctaggtcttttgttgcgaataccagcctcatgccgctgccctaaaACACTTCCAATGGATTGCCTTATGAAGCCTGGAAACTGCTGTTCCAGAGGGGTTCAGAAGGTGgcg > 2:6167710‑M1/86‑151 (MQ=255) tcagcaacggaaagccttcaaaggatcgacctgctaatgctaggtcttttgttgcgaataccagcctcatgccgctgccctaaaACACTTCCAATGGATTGCCTTATGAAGCCTGGAAACTGCTGTTCCAGAGGGGTTCAGAAGGTGgcgc > 1:6992198‑M1/85‑151 (MQ=255) tcagcaacggaaagccttcaaaggatcgacctgctaatgctaggtcttttgttgcgaataccagcctcatgccgctgccctaaaACACTTCCAATGGATTGCCTTATGAAGCCTGGAAACTGCTGTTCCAGAGGGGTTCAGAAGGTGgcgc < 1:3501531‑M1/67‑1 (MQ=255) cagcaacggaaagccttcaaaggatcgacctgctaatgctaggtcttttgttgcgaataccagcctcatgccgctgccctaaaACACTTCCAATGGATTGCCTTATGAAGCCTGGAAACTGCTGTTCCAGAGGGGTTCAGAAGGTGGcgcg < 2:1692506‑M1/68‑1 (MQ=255) caacggaaagccttcaaaggatcgacctgctaatgctaggtcttttgttgcgaataccagcctcatgccgctgccctaaaACACTTCCAATGGATTGCCTTATGAAGCCTGGAAACTGCTGTTCCAGAGGGGTTCAGAAGGTGGCGCGGAc < 2:307821‑M1/71‑1 (MQ=255) aacggaaagccttcaaaggatcgacctgctaatgctttttttttttttttgaataccagcctcatgccgctgccctaaaACACTTCCAATGGATTGCCTTATGAAGCCTGGAAACTGCTGTTCCAGAGGGGTTCAGAAGGTGGCGCGGAct < 2:1182925‑M1/72‑1 (MQ=255) aacggaaagccttcaaaggatcgacctgctaatgctaggtcttttgttgcgaataccagcctcatgccgctgccctaaaACACTTCCAATGGATTGCCTTATGAAGCCTGGAAACTGCTGTTCCAGAGGGGTTCAGAAGGTGGCGCGGAct < 1:6104438‑M1/72‑1 (MQ=255) acggaaagccttcaaaggatcgacctgctaatgctaggtcttttgttgcgaataccagcctcatgccgctgccctaaaACACTTCCAATGGATTGCCTTATGAAGCCTGGAAACTGCTGTTCCAGAGGGGTTCAGAAGGTGGCGCGGActc > 2:6896675‑M1/79‑151 (MQ=255) gagagccttcaaaggatcgacctgctaatgctaggtcttttgttgcgaagaccagcctcatgccgctgccctaaaACACTTCCAATGGATTGCCTTATGAAGCCTGGAAACTGCTGTTCCAGAGGGGTTCAGAAGGTGGCGCGGACTCTAc > 2:5426216‑M1/76‑151 (MQ=255) gccttcaaaggatcgacctgctaatgctaggtcttttgttgcgaataccagcctcatgccgctgccctaaaACACTTCCAATGGATTGCCTTATGAAGCCTGGAAACTGCTGTTCCAGAGGGGTTCAGAAGGTGGCGCGGACTCTACAGGa < 1:5783181‑M1/80‑1 (MQ=255) ccttcaaaggatcgacctgctaatgctaggtcttttgttgcgaataccagcctcatgccgctgccctaaaACACTTCCAATGGATTGCCTTATGAAGCCTGGAAACTGCTGTTCCAGAGGGGTTCAGAAGGTGGCGCGGACTCTACAGGAt < 1:2196830‑M1/81‑1 (MQ=255) cttcaaaggatcgacctgctaatgctaggtcttttgttgcgaataccagcctcatgccgctgccctaaaACACTTCCAATGGATTGCCTTATGAAGCCTGGAAACTGCTGTTCCAGAGGGGTTCAGAAGGTGGCGCGGACTCTACAGGAtt < 2:4712541‑M1/82‑1 (MQ=255) cttcaaaggatcgacctgctaatgctaggtcttttgttgcgaataccagcctcatgccgctgccctaaaACACTTCCAATGGATTGCCTTATGAAGCCTGGAAACTGCTGTTCCAGAGGGGTTCAGAAGGTGGCGCGGACTCTACAGGAtt < 2:1349372‑M1/82‑1 (MQ=255) cttcaaaggatcgacctgctaatgctaggtcttttgttgcgaataccagcctcatgccgctgccctaaaACACTTCCAATGGACTGCCTTATGAAGCCTGGAAACTGCTGTTCCAGAGGGGTTCAGAAGGTGCCGCGGACtctacacgact < 2:6697469‑M1/82‑6 (MQ=255) ttcaaaggatcgacctgctaatgctaggtcttttgttgcgaataccagcctcatgccgctgccctaaaACACTTCCAATGGATTGCCTTATGAAGCCTGGAAACTGCTGTTCCAGAGGGGTTCAGAAGGTGGCGCGGACTCTACAGGAttt > 1:1753246‑M1/69‑151 (MQ=255) aaggatcgacctgctaatgctaggtcttttgttgcgaataccagcctcatgccgctgccctaaaACACTTCCAATGGATTGCCTTATGAAGCCTGGAAACTGCTGTTCCAGAGGGGTTCAGAAGGTGGCGCGGACTCTACAGGATTTACTa < 2:338372‑M1/87‑1 (MQ=255) aggatcgacctgctaatgctaggtcttttgttgcgaataccagcctcatgccgctgccctaaaACACTTCCAATGGATTGCCTTATGAAGCCTGGAAACTGCTGTTCCAGAGGGGTTCAGAAGGTGGCGCGGACTCTACAGGATTTACTaa > 1:3269048‑M1/64‑151 (MQ=255) gatcgacctgctaatgctaggtcttttgttgcgaataccagcctcatgccgctgccctaaaACACTTCCAATGGATTGCCTTATGAAGCCTGGAAACTGCTGTTCCAGAGGGGTTCAGAAGGTGGCGCGGACTCTACAGGATTTACTAACg > 2:1048811‑M1/62‑151 (MQ=255) gacctgctaatgctaggtcttttgttgcgaataccagcctcatgccgctgccctaaaACACTTCCAATGGATTGCCTTATGAAGCCTGGAAACTGCTGTTCCAGAGGGGTTCAGAAGGTGGCGCGGACTCTACAGGATTTACTAACGATTc < 1:340919‑M1/94‑1 (MQ=255) cctgcgaatgctaggtcttttgttgcgaataccagcctcatgccgctgccctaaaACACTTCCAATGGATTGCCTTATGAAGCCTGGAAACTGCTGTTCCAGAGGGGTTCAGAAGGTGGCGCGGACTCTACAGGATTTACTAACGATTccc > 2:4990634‑M1/56‑151 (MQ=255) ctgctaatgctaggtcttttgttgcgaataccagcctcatgccgctgccctaaaACACTTCCAATGGATTGCCTTATGAAGCCTGGAAACTGCTGTTCCAGAGGGGTTCAGAAGGTGGCGCGGACTCTACAGGATTTACTAACGATTCCCa > 1:2509777‑M1/55‑151 (MQ=255) tgctaatgctaggtcttttgttgcgaataccagcctcatgccgctgccctaaaACACTTCCAATGGATTGCCTTATGAAGCCTGGAAACTGCTGTTCCAGAGGGGTTCAGAAGGTGGCGCGGACTCTACAGGATTTACTAACGATTCCCAc > 2:6608153‑M1/54‑151 (MQ=255) ctaatgctaggtcttttgttgcgaataccagcctcatgccgctgccctaaaACACTTCCAATGGATTGCCTTATGAAGCCTGGAAACTGCTGTTCCAGAGGGGTTCAGAAGGTGGCGCGGACTCTACAGGATTTACTAACGATTCCCAccc < 1:2158909‑M1/100‑1 (MQ=255) taatgctaggtcttttgttgcgaataccagcctcatgccgctgccctaaaACACTTCCAATGGATTGCCTTATGAAGCCTGGAAACTGCTGTTCCAGAGGGGTTCAGAAGGTGGCGCGGACTCTACAGGATTTACTAACGATTCccacacc > 2:3501531‑M1/51‑148 (MQ=255) taatgctaggtcttttgttgcgaataccagcctcatgccgctgccctaaaACACTTCCAATGGATTGCCTTATGAAGCCTGGAAACTGCTGTTCCAGAGGGGTTCAGAAGGTGGCGCGGACTCTACAGGATTTACTAACGATTCCCAcccc > 1:685639‑M1/51‑151 (MQ=255) aatgctaggtcttttgttgcgaataccagcctcatgccgctgccctaaaACACTTCCAATGGATTGCCTTATGAAGCCCGGAAACTGCTGTTCCAGAGGGGTTCAGAAGGTGGCGCGGACTCTACAGGATTTACTAACGATTCCCaccccc < 2:5676736‑M1/102‑2 (MQ=255) atgctaggtcttttgttgcgaataccagcctcatgccgctgccctaaaACACTTCCAATGGATTGCCTTATGAAGCCTGGAAACTGCTGTTCCAGAGGGGTTCAGAAGGTGGCGCGGACTCTACAGGATTTACTAACGATTCCCACCCCTc > 2:4172558‑M1/49‑151 (MQ=255) tgctaggtcttttgttgcgaataccagcctcatgccgctgccctaaaACACTTCCAATGGATTGCCTTATGAAGCCTGGAAACTGCTGTTCCAGAGGGGTTCAGAAGGTGGCGCGGACTCTACAGGATTTACTAACGATTCCCACCCCTCa > 1:4303529‑M1/48‑151 (MQ=255) gctaggtcttttgttgcgaataccagcctcatgccgctgccctaaaACACTTCCAATGGATTGCCTTATGAAGCCTGGAAACTGCTGTTCCAGAGGGGTTCAGAAGGTGGCGCGGACTCTACAGGATTTACTAACGATTCCCACCCCTCAg > 2:3666517‑M1/47‑151 (MQ=255) ctaggtcttttgttgcgaataccagcctcatgccgctgccctaaaACACTTCCAATGGATTGCCTTATGAAGCCTGGAAACTGCTGTTCCAGAGGGGTTCAGAAGGTGGCGCGGACTCTACAGGATTTACTAACGATTCCCACCCCTCAGa < 1:5990816‑M1/106‑1 (MQ=255) ctaggtcttttgttgcgaataccagcctcatgccgctgccctaaaACACTTCCAATGGATTGCCTTATGAAGCCTGGAAACTGCTGTTCCAGAGGGGTTCAGAAGGTGGCGCGGACTCTACAGGATTTACTAACGATTCCCACCCCTCAGa < 1:5355245‑M1/106‑1 (MQ=255) taggtcttttgttgcgaataccagcctcatgccgctgccctaaaACACTTCCAATGGATTGCCTTATGAAGCCTGGAAACTGCTGTTCCAGAGGGGTTCAGAAGGTGGCGCGGACTCTACAGGATTTACTAACGATTCCCACCCCTCAGAt > 1:2941910‑M1/45‑151 (MQ=255) ggtcttttgttgcgaataccagcctcatgccgctgccctaaaACACTTCCAATGGATTGCCTTATGAAGCCTGGAAACTGCTGTTCCAGAGGGGTTCAGAAGGTGGCGCGGACTCTACAGGATTTACTAACGATTCCCACCCCTCAGATCg > 1:4951152‑M1/43‑151 (MQ=255) tcttttgttgcgaataccagcctcatgccgctgccctaaaACACTTCCAATGGATTGCCTTATGAAGCCTGGAAACTGCTGTTCCAGAGGGGTTCAGAAGGTGGCGCGGACTCTACAGGATTTACTAACGATTCCCACCCCTCAGATCgtt > 2:3723217‑M1/41‑151 (MQ=255) cttttgttgcgaataccagcctcatgccgctgccctaaaACACTTCCAATGGATTGCCTTATGAAGCCTGGAAACTGCTGTTCCAGAGGGGTTCAGAAGGTGGCGCGGACTCTACAGGATTTACTAACGATTCCCACCCCTc < 2:5412885‑M1/103‑1 (MQ=255) gttgcgaataccagcctcatgccgctgccctaaaACACTTCCAATGGATTGCCTTATGAAGCCTGGAAACTGCTGTTCCAGAGGGGTTCAGAAGGTGGCGCGGACTCTACAGGATTTACTAACGATTCCCACCCCTCAGATCGTTGTTGCt > 2:4316855‑M1/35‑151 (MQ=255) ttgcgaataccagcctcatgccgctgccctaaaACACTTCCAATGGATTGCCTTATGAAGCCTGGAAACTGCTGTTCCAGAGGGGTTCAGAAGGTGGCGCGGACTATACAGGATTTACTAACGATTCCCACCCCTCAGATCGTTGTTGCTc < 2:4509587‑M1/118‑1 (MQ=255) ataccagcctcatgccgctgccctaaaACACTTCCAATGGATTGCCTTATGAAGCCTGGAAACTGCTGTTCCAGAGGGGTTCAGAAGGTGGCGCGGACTCTACAGGATTTACTAACGATTCCCACCCCTCAGATCGTTGTTGCTCAGTACg < 2:3966745‑M1/124‑1 (MQ=255) taccagcctcatgccgctgccctaaaACACTTCCAATGGATTGCCTTATGAAGCCTGGAAACTGCTGTTCCAGAGGGGTTCAGAAGGTGGCGCGGACTCTACAGGATTTACTAACGATTCCCACCCCTCAGATCGTTGTTGCTCAGTACga > 2:6755496‑M1/27‑151 (MQ=255) taccagcctcatgccgctgccctaaaACACTTCCAATGGATTGCCTTATGAAGCCTGGAAACTGCTGTTCCAGAGGGGTTCAGAAGGTGGCGCGGACTCTACAGGATTTACTAACGATTCCCACCCCTCAGATCGTTGTTGCTCAGTACga < 1:6457921‑M1/125‑1 (MQ=255) ccagcctcatgccgctgccctaaaACACTTCCAATGGATTGCCTTATGAAGCCTGGAAACTGCTGTTCCAGAGGGGTTCAGAAGGTGGCGCGGACTCTACAGGATTTACTAACGATTCCCACCCCTCAGATCGTTGTTGCTCAGTACgatg < 2:80275‑M1/127‑1 (MQ=255) ccagcctcatgccgctgccctaaaACACTTCCAATGGATTGCCTTATGAAGCCTGGAAACTGCTGTTCCAGAGGGGTTCAGAAGGTGGCGCGGACTCTACAGGATTTACTAACGATTCCCACCCCTCAGATCGTTGTTGCTCAGTACgatg > 2:4639255‑M1/25‑151 (MQ=255) ccagcctcatgccgctgccctaaaACACTTCCAATGGATTGCCTTATGAAGCCTGGAAACTGCTGTTCCAGAGGGGTTCAGAAGGTGGCGCGGACTCTACAGGATTTACTAACGATTCCCACCCCTCAGATCGTTGTTGCTCAGTACgatg < 2:3821532‑M1/127‑1 (MQ=255) ccagcctcatgccgctgccctaaaACACTTCCAATGGATTGCCTTATGAAGCCTGGAAACTGCTGTTCCAGAGGGGTTCAGAAGGTGGCGCGGACTCTACAGGATTTACTAACGATTCCCACCCCTCAGATCGTTGTTGCTCAGTACgatg > 2:300424‑M1/25‑151 (MQ=255) cagcctcatgccgctgccctaaaACACTTCCAATGGATTGCCTTATGAAGCCTGGAAACTGCTGTTCCAGAGGGGTTCAGAAGGTGGCGCGGACTCTACAGGATTTACTAACGATTCCCACCCCTCAGATCGTTGTTGCTCAGTACgatga < 1:4916576‑M1/128‑1 (MQ=255) gcctcatgccgctgccctaaaACACTTCCAATGGATTGCCTTATGAAGCCTGGAAACTGCTGTTCCAGAGGGGTTCAGAAGGTGGCGCGGACTCTACAGGATTTACTAACGATTCCCACCCCTCAGATCGTTGTTGCTCAGTACGATGATc > 1:5129057‑M1/22‑151 (MQ=255) tcatgccgctgccctaaaACACTTCCAATGGATTGCCTTATGAAGCCTGGAAACTGCTGTTCCAGAGGGGTTCAGAAGGTGGCGCGGACTCTACAGGATTTACTAACGATTCCCACCCCTCAGATCGTTGTTGCTCAGTACGATGATCGGc < 1:334749‑M1/133‑1 (MQ=255) gccgctgccctaaaACACTTCCAATGGATTGCCTTATGAAGCCTGGAAACTGCTGTTCCAGAGGGGTTCAGAAGGTGGCGCGGACTCTACAGGATTTACTAACGATTCCCACCCCTCAGATCGTTGTTGCTCAGTACGATGATCGGCGTCt > 1:477678‑M1/15‑151 (MQ=255) gccgctgccctaaaACACTTCCAATGGATTGCCTTATGAAGCCTGGAAACTGCTGTTCCAGAGGGGTTCAGAAGGTGGCGCGGACTCTACAGGATTTACTAACGATTCCCACCCCTCAGATCGTTGTTGCTCAGTACGATGATCGGCGTCt < 2:2434298‑M1/137‑1 (MQ=255) ccgctgccctaaaACACTTCCAATGGATTGCCTTATGAAGCCTGGAAACTGCTGTTCCAGAGGGGTTCAGAAGGTGGCGCGGACTCTACAGGATTTACTAACGATTCCCACCCCTCAGATCGTTGTTGCTCAGTACGATGATCGGCGTCtt < 1:6793722‑M1/138‑1 (MQ=255) ctgccctaaaACACTTCCAATGGATTGCCTTATGAAGCCTGGAAACTGCTGTTCCAGAGGGGTTCAGAAGGTGGCGCGGACTCTACAGGATTTACTAACGATTCCCACCCCTCAGATCGTTGTTGCTCAGTACGATGATCGGCGTCTTGGc > 1:1242990‑M1/11‑151 (MQ=255) tgccctaaaACACTTCCAATGGATTGCCTTATGAAGCCTGGAAACTGCTGTTCCAGAGGGGTTCAGAAGGTGGCGCGGACTCTACAGGATTTACTAACGATTCCCACCCCTCAGATCGTTGTTGCTCAGTACGATGATCGGCGTCTTGGcc < 2:5802673‑M1/142‑1 (MQ=255) aaACACTTCCAATGGATTGCCTTATGAAGCCTGGAAACTGCTGTTCCAGAGGGGTTCAGAAGGTGGCGCGGACTCTACAGGATTTACTAACGATTCCCACCCCTCAGATCGTTGTTGCTCAGTACGATGATCGGCGTCTTGGCCAAGTCgg > 1:229654‑M1/3‑151 (MQ=255) aaACACTTCCAATGGATTGCCTTATGAAGCCTGGAAACTGCTGTTCCAGAGGGGTTCAGAAGGTGGCGCGGACTCTACAGGATTTACTAACGATTCCCACCCCTCAGATCGTTGTTGCTCAGTACGATGATCGGCGTCTTGGCCAAGTCgg > 1:630093‑M1/3‑151 (MQ=255) aACACTTCCAATGGATTGCCTTATGAAGCCTGGAAACTGCTGTTCCAGAGGGGTTCAGAAGGTGGCGCGGACTCTACAGGATTTACTAACGATTCCCACCCCTCAGATCGTTGTTGCTCAGTACGATGATCGGCGTCTTGGCCAAGTCggg > 2:2079791‑M1/2‑151 (MQ=255) | GAATAAATCCTGCGTGGCTGCCTGCCAGAAAAGTGTCCGGATGACCGTGGAGTCGGTGTCCGGATGCTCGTGGAATGAGTGTCCGGATCAGCGTGGAATCACTGTCCGGATGCGCGTGGAATGGGTGTCCGAGTCAGCGTGGAATCCGCACACTTCCAATGGATTGCCTTATGAAGCCTGGAAACTGCTGTTCCAGAGGGGTTCAGAAGGTGGCGCGGACTCTACAGGATTTACTAACGATTCCCACCCCTCAGATCGTTGTTGCTCAGTACGATGATCGGCGTCTTGGCCAAGTCGGGC > CP009974/2447‑2746 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |