BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC MC JC	CP009974	5,798,527	Δ2,603 bp	intergenic (‑15/–)	RPPX_25885 ← / –	integrase/–

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	CP009974	1–2595	2595	1–2595	NA [0]	[0] 314	RPPX_00005–RPPX_00010	RPPX_00005,RPPX_00010
*	*	÷	CP009974	5798527	5798534	8	313 [0]	[0] NA	RPPX_25885/–	integrase/–

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009974	2596 =	0 (0.000)	296 (0.860)	167/284	1.1	100%	intergenic (‑203/+211)	RPPX_00010/RPPX_00015	integrase/peptidase S24
*	?	CP009974	= 5798526	0 (0.000)	296 (0.860)	167/284	1.1	100%	intergenic (‑14/–)	RPPX_25885/–	integrase/–

Only 100 of 313 total aligned reads displayed.

CCTGACTCGATAAGCGTGTGCCAAAGGAAGGATTGAGCTGGCTCGACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACACTTCC  >  CP009974/5798376‑5798534

ccTGACTCGATAAGCGTGTGCCAAAGGAAGGATTGAGCTGGCTCGACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTaaa                                                                                                                                                       >  2:7081212/1‑151 (MQ=255)

     cTCGATAAGCGTGTGCCAAAGGAAGGATTGAGCTGGCTCGACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacact                                                                                                                                                  <  1:6565464‑M2/151‑6 (MQ=255)

      tCGATAAGCGTGTGCCAAAGGAAGGATTGAGCTGGCTCGACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTATTATTACGAATACCAGCCTCATGCCGCTACCCTAAAacactt                                                                                                                                                 <  2:5699767‑M2/151‑7 (MQ=255)

       cGATAAGCGTGTGCCAAAGGAAGGATTGAGCTGGCTCGACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttc                                                                                                                                                <  2:1107822‑M2/151‑8 (MQ=255)

        gATAAGCGTGTGCCAAAGGAAGGATTGAGCTGGCTCGACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttcc                                                                                                                                               <  2:2662628‑M2/151‑9 (MQ=255)

          tAAGCGTGTGCCAAAGGAAGGATTGAGCTGGCTCGACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaa                                                                                                                                             <  1:6210543‑M2/151‑11 (MQ=255)

           aaGCGTGTGCCAAAGGAAGGATTGAGCTGGCTCGACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaat                                                                                                                                            <  2:2426064‑M2/151‑12 (MQ=255)

              cGTGTGCCAAAGGAAGGATTGAGCTGGCTCGACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatgga                                                                                                                                         <  1:5495277‑M2/151‑15 (MQ=255)

               gtgtGCCAAAGGAAGGATTGAGCTGGCTCGACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggat                                                                                                                                        >  1:4836171‑M2/1‑136 (MQ=255)

                tgtgCCAAAGGAAGGATTGAGCTGGCTCGACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggatt                                                                                                                                       <  1:150543‑M2/151‑17 (MQ=255)

                  tgCCAAAGGAAGGATTGAGCTGGCTCGACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgc                                                                                                                                     <  1:1115992‑M2/151‑19 (MQ=255)

                     cAAAGGAAGGATTGAGCTGGCTCGACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgcctt                                                                                                                                  >  1:300616‑M2/1‑130 (MQ=255)

                        aggaaggaTTGAGCTGGCTCGACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatg                                                                                                                               >  1:1786784‑M2/1‑127 (MQ=255)

                         ggaaggaTTGAGCTGGCTCGACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatga                                                                                                                              >  1:2787439‑M2/1‑126 (MQ=255)

                           aaggaTTGAGCTGGCTCGACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaag                                                                                                                            >  2:5184379‑M2/1‑124 (MQ=255)

                           aaggaTTGAGCTGGCTCGACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaag                                                                                                                            >  1:5222029‑M2/1‑124 (MQ=255)

                           aaggaTTGAGCTGGCTCGACTGGC‑ATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagc                                                                                                                           >  2:5332585‑M2/1‑123 (MQ=255)

                            aggaTTGAGCTGGCTCGACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagc                                                                                                                           >  1:3543019‑M2/1‑123 (MQ=255)

                              gaTTGAGCTGGCTCGACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcct                                                                                                                         <  2:3800049‑M2/151‑31 (MQ=255)

                              gaTTGAGCTGGCTCGACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcct                                                                                                                         <  1:3572833‑M2/151‑31 (MQ=255)

                                  gAGCTGGCTCGACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaa                                                                                                                     >  2:605836‑M2/1‑117 (MQ=255)

                                  gAGCTGGCTCGACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaa                                                                                                                     >  2:5820830‑M2/1‑117 (MQ=255)

                                    gCTGGCTCGACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCGTAAAacacttccaatggattgccttatgaagcctggcaac                                                                                                                   <  2:3710302‑M2/151‑37 (MQ=255)

                                     cTGGCTCGACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaact                                                                                                                  >  1:1896359‑M2/1‑114 (MQ=255)

                                      tGGCTCGACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCAGGCCGCTGCCCTAAAccacttccaatggattgccttatgcagcctggaaactt                                                                                                                 <  1:4575581‑M2/151‑39 (MQ=255)

                                        gCTCGACTGGTCATCCCTCTGACCCAATCAGCATCGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCCTGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgct                                                                                                               >  2:690470‑M2/1‑111 (MQ=255)

                                            gACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttc                                                                                                           <  1:670500‑M2/151‑45 (MQ=255)

                                            gACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttc                                                                                                           <  1:2540210‑M2/151‑45 (MQ=255)

                                            gACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttc                                                                                                           <  1:4316855‑M2/151‑45 (MQ=255)

                                              cTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttcca                                                                                                         <  1:4707941‑M2/151‑47 (MQ=255)

                                                ggCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccaga                                                                                                       <  2:4632138‑M2/151‑49 (MQ=255)

                                                ggCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccaga                                                                                                       <  1:3652761‑M2/151‑49 (MQ=255)

                                                ggCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccaga                                                                                                       >  1:1045417‑M2/1‑103 (MQ=255)

                                                 gCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCCAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagag                                                                                                      <  2:7059231‑M2/151‑50 (MQ=255)

                                                    aTCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagagggg                                                                                                   >  1:6257682‑M2/1‑99 (MQ=255)

                                                      cccTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggtt                                                                                                 >  2:1785151‑M2/1‑97 (MQ=255)

                                                        ctctGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttca                                                                                               <  1:5071262‑M2/151‑57 (MQ=255)

                                                        ctctGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacactcccaatggattgccttatgaagcctggcaactgctgttccagaggggttca                                                                                               <  2:6969005‑M2/151‑57 (MQ=255)

                                                         tctGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcag                                                                                              >  1:5754970‑M2/1‑94 (MQ=255)

                                                          ctGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcaga                                                                                             >  1:2690369‑M2/1‑93 (MQ=255)

                                                            gACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaag                                                                                           >  1:185983‑M2/1‑91 (MQ=255)

                                                            gACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacactcccaatggattgccctatgaagcctggaaactgctgtcccagcggggttcagaag                                                                                           <  2:1569637‑M2/151‑61 (MQ=255)

                                                              cccAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggt                                                                                         >  2:6853693‑M2/1‑89 (MQ=255)

                                                                  aTCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcg                                                                                     >  1:6815299‑M2/1‑85 (MQ=255)

                                                                    cAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcg                                                                                   >  1:3119009‑M2/1‑83 (MQ=255)

                                                                    cAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatgcattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcg                                                                                   <  1:4262959‑M2/151‑69 (MQ=255)

                                                                        aaCGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggact                                                                               <  2:4508915‑M2/151‑73 (MQ=255)

                                                                          cGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactct                                                                             >  1:4460498‑M2/1‑77 (MQ=255)

                                                                          cGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactct                                                                             <  1:3273906‑M2/151‑75 (MQ=255)

                                                                          cGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacctccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactct                                                                             <  2:5070299‑M2/151‑75 (MQ=255)

                                                                            gAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctac                                                                           <  1:5135803‑M2/151‑77 (MQ=255)

                                                                             aaaGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctaca                                                                          >  1:6121472‑M2/1‑74 (MQ=255)

                                                                              aaGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacag                                                                         <  1:3358280‑M2/151‑79 (MQ=255)

                                                                                 ccTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggat                                                                      <  1:2196830‑M2/151‑82 (MQ=255)

                                                                                   ttCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggattt                                                                    >  1:1753246‑M2/1‑68 (MQ=255)

                                                                                   ttCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggattt                                                                    >  2:2534260‑M2/1‑68 (MQ=255)

                                                                                   ttCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggattt                                                                    >  2:2733729‑M2/1‑68 (MQ=255)

                                                                                   ttCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGGTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggattt                                                                    >  2:203093‑M2/1‑68 (MQ=255)

                                                                                    tCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggattta                                                                   >  1:6956145‑M2/1‑67 (MQ=255)

                                                                                      aaaGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTGATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttact                                                                 <  1:7206750‑M2/151‑87 (MQ=255)

                                                                                      aaaGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactccacaggatttact                                                                 <  2:1479419‑M2/151‑87 (MQ=255)

                                                                                      aaaGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCATCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaaatgctgttccagaggggttcagaaggtggcgcggactctacaggatttact                                                                 >  2:1314120‑M2/1‑65 (MQ=255)

                                                                                       aaGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttacta                                                                >  1:4037140‑M2/1‑64 (MQ=255)

                                                                                          gATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacg                                                             <  2:3524616‑M2/151‑91 (MQ=255)

                                                                                              gACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattc                                                         <  2:3405049‑M2/151‑95 (MQ=255)

                                                                                              gACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattc                                                         <  1:7008152‑M2/151‑95 (MQ=255)

                                                                                                 cTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattccca                                                      <  2:3893902‑M2/151‑98 (MQ=255)

                                                                                                 cTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattccca                                                      >  1:2509777‑M2/1‑54 (MQ=255)

                                                                                                    cTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccaccc                                                   <  1:2158909‑M2/151‑101 (MQ=255)

                                                                                                     tAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccc                                                  <  2:5425084‑M2/151‑102 (MQ=255)

                                                                                                      aaTGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccaccccc                                                 <  2:620916‑M2/151‑103 (MQ=255)

                                                                                                       aTGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctc                                                <  2:2183499‑M2/151‑104 (MQ=255)

                                                                                                       aTGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctc                                                <  2:3984180‑M2/151‑104 (MQ=255)

                                                                                                        tGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctca                                               <  2:229654‑M2/151‑105 (MQ=255)

                                                                                                        tGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctca                                               <  2:6735086‑M2/151‑105 (MQ=255)

                                                                                                         gCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctcag                                              <  2:4857822‑M2/151‑106 (MQ=255)

                                                                                                          cTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctcaga                                             <  1:5355245‑M2/151‑107 (MQ=255)

                                                                                                           tAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctcagat                                            >  2:5473517‑M2/1‑44 (MQ=255)

                                                                                                           gagGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctcagat                                            >  1:2941869‑M2/2‑44 (MQ=255)

                                                                                                             ggTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctcagatcg                                          >  1:4950754‑M2/1‑42 (MQ=255)

                                                                                                                      ttgCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctcagatcgttgttgctc                                 <  1:5855404‑M2/151‑119 (MQ=255)

                                                                                                                          gAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctcagatcgttgttgctcagta                             <  2:4696276‑M2/151‑123 (MQ=255)

                                                                                                                            aTACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctcagatcgttgttgctcagtacg                           <  2:1893622‑M2/151‑125 (MQ=255)

                                                                                                                             tACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctcagatcgttgttgctcagtacga                          <  1:6457921‑M2/151‑126 (MQ=255)

                                                                                                                               ccAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctcagatcgttgttgctcagtacgatg                        <  2:80275‑M2/151‑128 (MQ=255)

                                                                                                                                cAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctcagatcgttgttgctcagtacgatga                       <  2:5893469‑M2/151‑129 (MQ=255)

                                                                                                                                cAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctcagatcgttgttgctcagtacgatga                       >  2:1006778‑M2/1‑23 (MQ=255)

                                                                                                                                     tCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctcagatcgttgttgctcagtacgatgatcggc                  >  2:6617035‑M2/1‑18 (MQ=255)

                                                                                                                                     tCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctcagatcgttgttgctcagtacgatgatcggc                  >  2:4100731‑M2/1‑18 (MQ=255)

                                                                                                                                       aTGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctcagatcgttgttgctcagtacgatgatcggcgt                >  2:5619354‑M2/1‑16 (MQ=255)

                                                                                                                                         gCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctcagatcgttgttgctcagtacgatgatcggcgtct              >  1:477678‑M2/1‑14 (MQ=255)

                                                                                                                                         gCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctcagatcgttgttgctcagtacgatgatcggcgtct              >  1:3422569‑M2/1‑14 (MQ=255)

                                                                                                                                             cTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctcagatcgttgttgctcagtacgatgatcggcgtcttggc          >  1:1242990‑M2/1‑10 (MQ=255)

                                                                                                                                              tGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctcagatcgttgttgctcagtacgatgatcggcgtcttggcc         >  1:6021349‑M2/1‑9 (MQ=255)

                                                                                                                                              tGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctcagatcgttgttgctcagtacgatgatcggcgtcttggcc         >  2:312652‑M2/1‑9 (MQ=255)

                                                                                                                                               gCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctcagatcgttgttgctcagtacgatgatcggcgtcttggcca        <  2:4199588‑M2/151‑144 (MQ=255)

                                                                                                                                                   tAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctcagatcgttgttgctcagtacgatgatcggcgtcttggccaagtc    <  2:432029‑M2/151‑148 (MQ=255)

                                                                                                                                                    aaaacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctcagatcgttgttgctcagtacgatgatcggcgtcttggccaagtcg   <  2:302205‑M2/151‑149 (MQ=255)

                                                                                                                                                     aaacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctcagatcgttgttgctcagtacgatgatcggcgtcttggccaagtcgg  >  1:630093‑M2/1‑2 (MQ=255)

                                                                                                                                                     aaacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctcagatcgttgttgctcagtacgatgatcggcgtcttggccaagtcgg  >  1:229654‑M2/1‑2 (MQ=255)

CCTGACTCGATAAGCGTGTGCCAAAGGAAGGATTGAGCTGGCTCGACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACACTTCC  >  CP009974/5798376‑5798534

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`