| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | CP009974 | 2,509,653 | Δ2,602 bp | RPPX_11210–[RPPX_11220] | RPPX_11210, RPPX_11215, [RPPX_11220] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | CP009974 | 2509653–2512248 | 2512254 | 7–2602 | 280 [4] | [0] 277 | RPPX_11210–[RPPX_11220] | RPPX_11210,RPPX_11215,[RPPX_11220] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009974 | = 2509652 | 4 (0.010) | 270 (1.030) | 161/288 | 0.2 | 99.3% | intergenic (+3590/‑204) | RPPX_11200/RPPX_11210 | beta‑aspartyl peptidase/integrase |
| ? | CP009974 | 2512255 = | 0 (0.000) | coding (24/1236 nt) | RPPX_11220 | hypothetical protein | |||||
Only 100 of 283 total aligned reads displayed.
AAGTTGCTTGAAGAGCAGCCCAGGATCATCGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009974/2509498‑2509652‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGCCGCGCAGACGCATAATCTGCTGATGTTCTGTGA > CP009974/2512255‑2512404 AAGTTGCTTGAAGAGCAGCCCAGGATCATCGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCCCCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCA < 1:3911877/151‑1 AGTTGCTTGAAGAGCAGCCCAGGATCATCGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAA < 2:4377306/151‑1 TGCTTGAAGAGCAGCCCAGGATCATCGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGGCAACAc > 1:1334483/1‑150 GCTTGAAGAGCAGCCCAGGATCATCGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATC < 1:4832549/151‑1 CTTGAAGAGCAGCCCAGGATCATCGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCC < 1:2906591/151‑1 TTGAAGAGCAGCCCAGGATCATCGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCG > 1:3518219/1‑151 AAGAGCAGCCCAGGATCATCGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTGATGTCAATGCCACCTTGAGCGTCTCGGGCGTTATCAGTAATCGCACGACGACTACCGTCAACACCCGGTT > 2:1676559/1‑151 GCAGCCCAGGATCATCGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTT < 2:2382818/151‑1 CAGCCCAGGATCATCGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTC > 1:3808305/1‑151 AGCCCAGGATCATCGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCA > 1:5276672/1‑151 CCCAGGATCATCGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGG > 2:3677552/1‑151 CAGGATCATCGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCC < 2:1897488/151‑1 CAGGATCATCGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCC > 2:2103552/1‑151 GGATCATCGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCAT > 2:1840199/1‑151 GATCATCGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGCCGACTACGGTCAACATCCGGTTGTTTCAGGCCATG > 2:3010647/1‑151 TCATCGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGG > 1:4644642/1‑151 TCGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCCCCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCT < 1:4978027/151‑1 gGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTG < 2:1388957/150‑1 CGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTG < 1:4552300/151‑1 ATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGT > 1:1269086/1‑151 GTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCG < 2:2637874/151‑1 GTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCG < 1:1470986/151‑1 TCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGA > 2:976428/1‑151 TCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGA < 1:3149717/151‑1 TCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTGTTTTCAGGCCATGGGGCTGGTCGA > 1:3680362/1‑151 CTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAG > 2:2955473/1‑151 TCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTCTTCAGGCCATGGGGCTGGTCGAGC > 1:4174107/1‑151 CCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCT < 1:2567408/151‑1 CTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGC > 2:3587192/1‑151 GGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCC > 1:4352932/1‑145 ATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTG > 1:3473044/1‑151 ATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTG > 1:116212/1‑151 CGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGC < 1:5151028/151‑1 GTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCG < 2:5144264/151‑1 GTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCG < 1:3074427/151‑1 TGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAA > 2:4766087/1‑151 TTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAG > 1:177119/1‑151 TGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGG > 1:537795/1‑151 GGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGT < 1:2458730/151‑1 TAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTC < 2:4319293/151‑1 ACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGTGCAACGGTGCGTCCc > 2:5346544/1‑150 CGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACC < 1:1534529/151‑1 ATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAAC > 2:3428603/1‑151 CGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACAC > 1:5423039/1‑151 GACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACT > 2:1946553/1‑151 ATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCACGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACA < 2:5250952/151‑1 TGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACAT < 2:1262656/151‑1 TGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCGCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTACAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACAT < 2:3204853/151‑1 GCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATG < 2:4528288/151‑1 CAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGA > 1:612192/1‑151 CAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGA < 2:871130/151‑1 CAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGA < 2:4725632/151‑1 TGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTT < 1:4233383/151‑1 GCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTT < 2:5434810/151‑1 TTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGC > 2:741127/1‑151 TTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGC < 1:2953258/151‑1 TTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGC < 2:5301648/151‑1 ATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGA < 1:1598651/151‑1 TGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGAT < 2:2492357/151‑1 GTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATG > 1:4575482/1‑151 TCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGC < 2:4644642/151‑1 CAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCA < 1:1136811/151‑1 AATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCAC < 1:1924230/151‑1 AATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCAC < 2:1112745/151‑1 ATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGTCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACc > 2:2156718/1‑150 TGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTC > 1:84608/1‑151 CCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGC > 2:2810445/1‑151 CACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGC < 2:15572/139‑1 CTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGT > 1:1051294/1‑151 TTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTC < 1:2296512/151‑1 GAGCGGCGCGGGCATGATCAGTAAGCGCACGACGACTACGGGCAACATCCGGTTTTTTCAGGCCAGGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCAT < 2:3456145/151‑1 CGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGT > 2:1404217/1‑151 CTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTG > 2:4466234/1‑151 CTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTG > 2:1684751/1‑151 CTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTG > 1:3306549/1‑151 GGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGG < 2:393774/151‑1 TATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGCC < 1:4873431/151‑1 TATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGCC < 2:311436/151‑1 CAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTTGAGCTGGCCCTGCAGTGGGGCAAAGGTGCGTCCACCCAACACTATATGATCTTTCGCGATGCACTCGCCGGGCATCGTTTTCGCGTGGCCGCG > 1:2537033/1‑151 GTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGCCGCGCA > 1:3600736/1‑151 CGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGCCGCGCAGACGC > 1:936374/1‑151 CGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGCCGCGCAGACGC < 1:2822827/151‑1 GCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGCCGCGCAGACGCA < 1:3275962/151‑1 GCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGCCGCGCAGACGCA > 2:4172742/1‑151 GCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGCCGCGCAGACGCA < 2:2757435/151‑1 ACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGCCGCGCAGACGCATA > 1:4765649/1‑151 CGACGACTACGGTCAACATCCGGTTTTTTCATGTCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGCCGCGCAGACGCATAA > 1:745074/1‑151 CGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGCCGCGCAGACGCATAATCT < 2:4360402/151‑1 CGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGCCGCGCAGACGCATAATCT < 2:1051294/151‑1 GACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGCCGCGCAGACGCATAATCTG > 1:4722588/1‑151 CTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGCCGCGCAGACGCATAATCTGCT < 1:5127193/151‑1 TACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGCCGCGCAGACGCATAATCTGCTG > 1:2255249/1‑151 TACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGCCGCGCAGACGCATAATCTGCTG > 1:2090759/1‑151 GGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGCCGCGCCGACGCATAATCTGCTGATG > 2:1619646/1‑151 GTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGCCGCGCAGACGCATAATCTGCTGATGT > 2:3175959/1‑151 TCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGCCGCGCAGACGCATAATCTGCTGATGTT < 2:4806837/151‑1 TCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGCCGCGCAGACGCATAATCTGCTGATGTT > 2:199749/1‑151 CAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGCCGCGCAGACGCATAATCTGCTGATGTTC < 1:5007443/151‑1 ACATCCGGCTTGTTCAGGCCATGGTGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCACCACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGCCGCGCAGACGCATAATCTGCTGATGTTCTG < 2:1334483/151‑1 TCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGCCGCGCAGACGCATAATCTGCTGATGTTCTGTGA < 2:4996983/151‑1 AAGTTGCTTGAAGAGCAGCCCAGGATCATCGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009974/2509498‑2509652‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGCCGCGCAGACGCATAATCTGCTGATGTTCTGTGA > CP009974/2512255‑2512404 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |