| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | CP009974 | 2,509,653 | Δ2,602 bp | RPPX_11210–[RPPX_11220] | RPPX_11210, RPPX_11215, [RPPX_11220] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | CP009974 | 2509653–2512248 | 2512254 | 7–2602 | 280 [4] | [0] 277 | RPPX_11210–[RPPX_11220] | RPPX_11210,RPPX_11215,[RPPX_11220] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009974 | = 2509652 | 4 (0.010) | 270 (1.030) | 161/288 | 0.2 | 99.3% | intergenic (+3590/‑204) | RPPX_11200/RPPX_11210 | beta‑aspartyl peptidase/integrase |
| ? | CP009974 | 2512255 = | 0 (0.000) | coding (24/1236 nt) | RPPX_11220 | hypothetical protein | |||||
Only 100 of 280 total aligned reads displayed.
GCTTGAAGAGCAGCCCAGGATCATCGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAGTGATTCCACGCTGATCCGGACACTCATTCCACGAGCATCCGGACACCGACTCCACGGTCATCCGGACACTTTTCTGGCAGGCAGCCACGCAGGATTTATTC > CP009974/2509503‑2509802 | gCTTGAAGAGCAGCCCAGGATTATCGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATc < 1:2542867‑M1/151‑2 (MQ=255) cTTGAAGAGCAGCCCAGGATCATCGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATcc < 1:2906591‑M1/151‑3 (MQ=255) tGAAGAGCAGCCCAGGATCATCGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccgg < 1:4652083‑M1/151‑5 (MQ=255) aaGAGCAGCCCAGGATCATCGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTGATGTCAATGCCACCTTGAGCGTCTCGGGCGTTATCAGTAATCGCACGACGACTACCGTCAACACccggtt > 2:1676559‑M1/1‑145 (MQ=255) agagCAGCCCAGGATCATCGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttt > 1:114272‑M1/1‑144 (MQ=255) cagcCCAGGATCATCGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttc > 1:3808305‑M1/1‑140 (MQ=255) agcCCAGGATCATCGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttca < 1:3564580‑M1/151‑13 (MQ=255) agcCCAGGATCATCGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttca > 1:2501235‑M1/1‑139 (MQ=255) cAGGATCATCGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggcc < 2:1897488‑M1/151‑17 (MQ=255) cAGGATCATCGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggcc < 1:3104811‑M1/151‑17 (MQ=255) ggATCATCGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccat > 2:1840199‑M1/1‑133 (MQ=255) cGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctg > 1:5378836‑M1/1‑126 (MQ=255) aTGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggt < 1:5282570‑M1/151‑28 (MQ=255) tctcCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcga > 2:976428‑M1/1‑121 (MQ=255) tctcCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcga < 1:3149717‑M1/151‑31 (MQ=255) tctcCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggtgttttcaggccatggggctggtcga > 1:3680362‑M1/1‑121 (MQ=255) ccagccagCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagct < 1:2567408‑M1/151‑34 (MQ=255) agccagcTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcagtccatggggctggtcgagctgg > 2:2296970‑M1/1‑116 (MQ=255) ccagcTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggcc < 2:3598747‑M1/151‑38 (MQ=255) agcTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccct < 2:4661403‑M1/151‑40 (MQ=255) agcTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccct < 1:4176741‑M1/151‑40 (MQ=255) gcTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcagtccatggggctggtcgagctgcccctg > 2:2736017‑M1/1‑111 (MQ=255) ggATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcag < 1:49825‑M1/151‑44 (MQ=255) aTCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtg > 1:3473044‑M1/1‑106 (MQ=255) ggctgTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcg < 2:2906447‑M1/149‑49 (MQ=255) gTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcg < 2:5144264‑M1/151‑49 (MQ=255) cTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgca > 1:1498265‑M1/1‑101 (MQ=255) cTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgca < 2:3546160‑M1/151‑51 (MQ=255) tGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATGAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaa < 2:2144513‑M1/151‑52 (MQ=255) tGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaa > 2:4766087‑M1/1‑100 (MQ=255) gTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgt < 2:537795‑M1/151‑60 (MQ=255) tAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtc < 2:4319293‑M1/151‑61 (MQ=255) caacCGATATCCACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtc < 2:2987257‑M1/150‑61 (MQ=255) aaCCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtcc > 2:2003500‑M1/1‑90 (MQ=255) aaCCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtccgtcc > 2:3082695‑M1/1‑90 (MQ=255) cGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacc > 1:4944974‑M1/1‑87 (MQ=255) gATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccaccc < 2:2529888‑M1/151‑66 (MQ=255) atCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaac > 2:3428603‑M1/1‑83 (MQ=255) atCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaac < 2:4518697‑M1/151‑69 (MQ=255) cGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacac > 1:5423039‑M1/1‑81 (MQ=255) gACATGCAAGTGCCTTATGTCAATGCCACCTTGGGCGTCTCGCGCATTATCAGTAATCGCACTACGACTACGGTCACCATccggttttttcaggccttgggcctggtcgagctggccctgcagtggcacaaaggtgcgtccacccaaccct < 2:1962896‑M1/151‑72 (MQ=255) gACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacact > 1:1452114‑M1/1‑80 (MQ=255) aTGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccacggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactaca < 2:5250952‑M1/151‑75 (MQ=255) tGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacat < 2:1262656‑M1/151‑76 (MQ=255) tGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacat < 2:1397110‑M1/151‑76 (MQ=255) tGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCGCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggtttttacaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacat < 2:3204853‑M1/151‑76 (MQ=255) cAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatga > 1:612192‑M1/1‑74 (MQ=255) cAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatga < 2:871130‑M1/151‑78 (MQ=255) aaGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTATGGTCAACATccggctttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccatccaacactacatgat > 1:1832497‑M1/1‑73 (MQ=255) aaGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgat > 1:4572133‑M1/1‑73 (MQ=255) aaGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgat > 1:870759‑M1/1‑73 (MQ=255) gTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctagtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatct > 2:4369774‑M1/1‑71 (MQ=255) tGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctt < 2:3128337‑M1/151‑82 (MQ=255) gCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcatgtcttttggctggtcgagctggccctgcagtggcgcacaggtgcgtccacccaacactacatgatcttt > 2:4639488‑M1/1‑69 (MQ=255) gCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatcttt < 2:5434810‑M1/151‑83 (MQ=255) gCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatcttt < 1:460305‑M1/151‑83 (MQ=255) ccTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcatatgtgcgtccaccctacactacatgatctttc > 2:1341256‑M1/1‑68 (MQ=255) ttATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgc < 2:5301648‑M1/151‑86 (MQ=255) ttATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgc > 2:741127‑M1/1‑66 (MQ=255) tATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcg > 1:962848‑M1/1‑65 (MQ=255) aTGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcga > 1:4261699‑M1/1‑64 (MQ=255) tGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgat < 2:1688215‑M1/151‑89 (MQ=255) aaTGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcac < 2:1112745‑M1/151‑93 (MQ=255) ccACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttctttccttttggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgc > 2:279166‑M1/1‑55 (MQ=255) cACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgc < 2:15572‑M1/139‑86 (MQ=255) cACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgc > 1:15572‑M1/1‑54 (MQ=255) aCCTTGAGCGTCTCGGGCATTATCAGTAATCGTACGTCGACTACGGTCAACATccggttttttcatgtcatggggctggtcgagctggccctgcagtggcgcaatggtgcgtctacccaacactacatgatctttcgcgttgctctcgctg > 1:1207820‑M1/1‑53 (MQ=255) aCCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccg < 1:4450675‑M1/151‑99 (MQ=255) cTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggt > 1:1051294‑M1/1‑51 (MQ=255) aGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatc > 2:3874549‑M1/1‑47 (MQ=255) cGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatcgt > 2:1404217‑M1/1‑45 (MQ=255) gTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatcgtt < 1:1663468‑M1/151‑108 (MQ=255) ctcGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatcgtttg < 1:5153326‑M1/151‑110 (MQ=255) ctcGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatcgtttg > 2:4466234‑M1/1‑42 (MQ=255) ctcGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatcgtttg > 1:3306549‑M1/1‑42 (MQ=255) gggCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatcgtttgcgg < 2:393774‑M1/151‑113 (MQ=255) aTTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatcgtttgcgggtgg > 2:3185826‑M1/1‑35 (MQ=255) aTCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatcgtttgcgggtggccg < 1:3915470‑M1/151‑120 (MQ=255) gTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatcgtttgcgggtggccgcgca < 1:4766087‑M1/151‑124 (MQ=255) gTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatcgtttgcgggtggccgcgca > 1:3600736‑M1/1‑28 (MQ=255) tCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatcgtttgcgggtggccgcgcagacg < 1:1948645‑M1/151‑128 (MQ=255) cGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatcgtttgcgggtggccgcgcagacgc < 1:2822827‑M1/151‑129 (MQ=255) gCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatcgtttgcgggtggccgcgcagacgca > 2:4172742‑M1/1‑22 (MQ=255) gCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatcgtttgcgggtggccgcgcagacgca < 1:3275962‑M1/151‑130 (MQ=255) cgacgaCTACGGTCAACATccggttttttcatgtcatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatcgtttgcgggtggccgcgcagacgcataa > 1:745074‑M1/1‑19 (MQ=255) cgacTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatcgtttgcgggtggccgcgcagacgcataatct < 2:1051294‑M1/151‑136 (MQ=255) cgacTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatcgtttgcgggtggccgcgcagacgcataatct < 1:2955473‑M1/151‑136 (MQ=255) cgacTACGGTCAACATacggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacgctacatgatctttcgcgatgcactcgccggtcatcgtttgcgggtggccgcgcagacgcataatct < 2:2483840‑M1/151‑136 (MQ=255) gacTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatcgtttgcgggtggccgcgcagacgcataatctg > 1:4722588‑M1/1‑15 (MQ=255) cTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatcgtttgcgggtggccgcgcagacgcataatctgct < 1:5127193‑M1/151‑139 (MQ=255) tACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatcgtttgcgggtggccgcgcagacgcataatctgctg > 1:2255249‑M1/1‑12 (MQ=255) tACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatcgtttgcgggtggccgcgcagacgcataatctgctg > 1:2090759‑M1/1‑12 (MQ=255) tACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatcgtttgcgggtggccgcgcagacgcataatctgctg < 1:1322873‑M1/151‑140 (MQ=255) ggTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatcgtttgcgggtggccgcgccgacgcataatctgctgatg > 2:1619646‑M1/1‑9 (MQ=255) tCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatcgtttgcgggtggccgcgcagacgcataatctgctgatgtt < 2:4806837‑M1/151‑145 (MQ=255) cAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatcgtttgcgggtggccgcgcagacgcataatctgctgatgttc < 1:5007443‑M1/151‑146 (MQ=255) caaaTTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAGTGATTCCACGCTGATCCGGACACTCATTCCACGAGCATCCGGACACCGACTCCACGGTCATCCGGACACTTTTCTGGCAGGCAGCCACGCAGGAttt < 1:1035672/148‑1 (MQ=11) aaCATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatcgtttgcgggtggccgcgcagacgcataatctgctgatgttct > 1:2379013‑M1/1‑5 (MQ=255) cATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatcgtttgcgggtggccgcgcagacgcataatctgctgatgttctgt > 1:4865015‑M1/1‑3 (MQ=255) tccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatcgtttgcgggtggccgcgcagacgcataatctgctgatgttctgtga < 2:4996983‑M1/151‑151 (MQ=255) | GCTTGAAGAGCAGCCCAGGATCATCGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAGTGATTCCACGCTGATCCGGACACTCATTCCACGAGCATCCGGACACCGACTCCACGGTCATCCGGACACTTTTCTGGCAGGCAGCCACGCAGGATTTATTC > CP009974/2509503‑2509802 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |