| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | CP009974 | 3,486,773 | Δ2,604 bp | RPPX_15555–RPPX_15560 | RPPX_15555, RPPX_15560 | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | CP009974 | 3486773 | 3489376 | 2604 | 255 [2] | [0] 251 | RPPX_15555–RPPX_15560 | RPPX_15555,RPPX_15560 |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009974 | = 3486772 | 2 (0.010) | 237 (0.920) | 153/284 | 0.4 | 99.6% | intergenic (+358/‑204) | RPPX_15550/RPPX_15555 | RNA polymerase sigma factor/integrase |
| ? | CP009974 | 3489377 = | 0 (0.000) | intergenic (+114/+176) | RPPX_15560/RPPX_15565 | ATPase AAA/ferredoxin | |||||
Only 100 of 268 total aligned reads displayed.
TCAGTAAATCAAAGTCGTTTCCAAAGGCTGCATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009974/3486615‑3486772‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacagggaCATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCCGA > CP009974/3489377‑3489526 gCAGTAAATCAAAGTCGTTTCCAAAGGCTGCATTTTTACAACCCATTGAAAAGCAGGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGC < 2:616762/150‑1 AGTAAATCAAAGTCGTTTCCAAAGGCTGCATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCAC > 2:3626146/1‑151 AGTAAATCAAAGTCGTTTCCAAAGGCTGCATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCAC < 2:1393483/151‑1 AGTAAATCAAAGTCGTTTCCAAAGGCTGCATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCAC < 1:3175202/151‑1 TAAATCAAAGTCGTTTCCAAAGGCTGCATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAG > 2:1041128/1‑151 AAATCAAAGTCGTTTCCAAAGGCTGCATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGG > 1:1079660/1‑151 ATCAAAGTCGTTTCCAAAGGCTGCATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGA > 2:689313/1‑151 TCAAAGTCGTTTCCAAAGGCTGCATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGCGCTGAACCCGCTAGTATTCGAACTCTGCACAGGGAC > 2:4343014/1‑151 CAAAGTCGTTTCCAAAGGCTGCATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACA > 1:462483/1‑151 AAAGTCGTTTCCAAAGGCTGCATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACAT < 2:288702/151‑1 CGTTTCCAAAGGCTGCATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACA > 2:838887/1‑151 GTTTCCAAAGGCTGCATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAG > 1:5305137/1‑151 CAAAGGCTGCATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTT > 1:1018854/1‑151 CAAAGGCTGCATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTT > 2:1921106/1‑151 AGGCTGCATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAG < 1:3379734/151‑1 CTGCATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGAT < 1:319060/151‑1 CATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAA < 2:762842/151‑1 ATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAG < 2:2305332/151‑1 ATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAG > 1:3914249/1‑151 ATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAG < 2:2774792/151‑1 TTTTACAGCCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGC < 2:4693554/151‑1 TACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAA > 1:1107421/1‑151 CAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGG > 1:3601331/1‑151 CAACCCAGTGAAAGGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGG < 1:769560/151‑1 cCCCCTTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGAC < 1:5076267/150‑1 ACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTCTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTCCACAGGGCCCTGCACCGGCTTTCACGACGCAGGCCAAGGAC > 2:3893397/1‑151 TTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGC > 2:3201797/1‑151 TGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCA < 1:3325757/151‑1 AAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAG < 1:4729656/151‑1 AAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGA < 1:670645/151‑1 AAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAA > 1:4800378/1‑151 AGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAG < 2:5188846/151‑1 AGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAG > 1:613006/1‑151 GCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGC < 1:4203905/151‑1 GCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGC < 1:4205010/151‑1 ATGTTTGATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGA < 2:2947304/151‑1 TGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGAT < 2:4797947/151‑1 GGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATT > 1:261177/1‑151 TTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTC < 2:540625/151‑1 TTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCA < 2:2339541/151‑1 TCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAG > 1:1464967/1‑151 CACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGG > 1:2308415/1‑151 CACCAGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGG < 2:3183692/151‑1 ACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGA > 1:4065332/1‑151 ACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGCCGCAAGAAGCGATTTCATCAGGA > 2:4207167/1‑151 CCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGAT > 1:256258/1‑151 CGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGAGATTTCATCAGGATG > 2:5275256/1‑151 AAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGG > 2:1144127/1‑151 AATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGCTGATGTTTGGG > 2:3405639/1‑151 AATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGG > 1:3699951/1‑151 TGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGAC > 1:3751318/1‑151 GAAATACCTTGCGAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATGCGAACTGTGCACAGGGACGTGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGAC < 2:2674300/151‑1 GAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGAC < 1:829971/151‑1 ACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGG > 2:5384017/1‑151 CTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAG > 1:4348058/1‑119 TTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAA < 2:4497345/151‑1 TTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAA < 1:3626146/151‑1 ggcgAGGTGCATCGCTTGCTCGCCGGGCTGAGCCGGCTAGTAGTCGAACTGTGCACGGGGACATGCACAGGCTTTCAGGATGAAGGCCGAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAA < 2:4817209/147‑1 GCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACG < 1:122749/145‑1 GCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACG > 2:122749/1‑145 AGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGAATACGGAAAAAAAT < 2:1768228/151‑1 CCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGG > 2:3293875/1‑151 CCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTATGGGACAAGCAGGGACTACGGAAAAAAATGTGG > 1:5274727/1‑151 CATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGG > 2:4075951/1‑151 CATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGG > 1:5160071/1‑151 TCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCG > 2:4374247/1‑151 CGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGG < 1:550814/151‑1 GCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGG > 1:1847079/1‑151 GCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAA < 2:2048805/151‑1 CTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAA < 1:1514333/151‑1 TCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAAC > 1:2243747/1‑151 CGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACC < 2:132780/151‑1 gCGGGCGGAACCCGCTAGTATTCGAACTGTGCACAGGGACCTGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGC < 2:4148410/150‑1 CGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCCAACCGCC > 2:1625576/1‑151 GGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCC > 1:1504022/1‑151 GGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCC < 2:4920692/151‑1 GGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAACAAATGTCGGCGGGCCACACCGCCac > 2:5012814/1‑149 GCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCT > 2:3818722/1‑151 GCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCT > 1:1340670/1‑151 CCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTT < 1:3507256/151‑1 CCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTG > 2:249756/1‑151 CGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGC > 2:3472022/1‑151 CGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGC > 1:1938009/1‑151 GCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCC > 1:4541349/1‑151 AGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGT > 1:641208/1‑151 AGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGT < 1:4846631/151‑1 AGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGT > 1:3781126/1‑151 GTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTA < 2:3038661/151‑1 GTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTA > 1:2167362/1‑151 GTATTCGAACTGTGCAAAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTA < 1:3887885/151‑1 TTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGA > 1:2815280/1‑151 ACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACA > 1:1941215/1‑151 CTGTGCACAGGGACATGCATGGGCTTTCAGGATGAAGGTCAAGGTCGTCACAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAA < 1:20792/151‑1 TGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAA < 1:3294392/151‑1 GCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAA > 2:2422243/1‑151 CACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAG < 1:3960158/151‑1 ACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGG > 2:134378/1‑151 CAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGC > 1:3054881/1‑151 GGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCC > 1:5007139/1‑151 GACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCCG > 2:5119357/1‑151 TCAGTAAATCAAAGTCGTTTCCAAAGGCTGCATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009974/3486615‑3486772‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacagggaCATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCCGA > CP009974/3489377‑3489526 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |