| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | CP009974 | 3,486,773 | Δ2,604 bp | RPPX_15555–RPPX_15560 | RPPX_15555, RPPX_15560 | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | CP009974 | 3486773 | 3489376 | 2604 | 255 [2] | [0] 251 | RPPX_15555–RPPX_15560 | RPPX_15555,RPPX_15560 |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009974 | = 3486772 | 2 (0.010) | 237 (0.920) | 153/284 | 0.4 | 99.6% | intergenic (+358/‑204) | RPPX_15550/RPPX_15555 | RNA polymerase sigma factor/integrase |
| ? | CP009974 | 3489377 = | 0 (0.000) | intergenic (+114/+176) | RPPX_15560/RPPX_15565 | ATPase AAA/ferredoxin | |||||
Only 100 of 255 total aligned reads displayed.
ATCAAAGTCGTTTCCAAAGGCTGCATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGATGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAGTGATTCCACGCTGATCCGGACACTCATTCCACGAGCATCCGGACACCGACTCCACGGTCATCCGGACACTTTTCTGGCAGGCAGCCACGCAGGATTTAT > CP009974/3486622‑3486920 | cAAAGTCGTTTCCAAAGGCTGCATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAca > 1:462483‑M1/1‑149 (MQ=255) aaaGTCGTTTCCAAAGGCTGCATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcat < 2:288702‑M1/151‑4 (MQ=255) tCGTTTCCAAAGGCTGCATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcac < 2:3439260‑M1/151‑8 (MQ=255) cGTTTCCAAAGGCTGCATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcaca > 2:838887‑M1/1‑143 (MQ=255) cGTTTCCAAAGGCTGCATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcaca > 1:1892636‑M1/1‑143 (MQ=255) gTTTCCAAAGGCTGCATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacag > 1:5305137‑M1/1‑142 (MQ=255) tttCCAAAGGCTGCATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacagg > 1:4817209‑M1/1‑141 (MQ=255) ttCCAAAGGCTGCATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggc > 2:528207‑M1/1‑140 (MQ=255) ttCCAAAGGCTGCATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggc > 2:3217057‑M1/1‑140 (MQ=255) ccAAAGGCTGCATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctt < 2:3763912‑M1/151‑14 (MQ=255) ccAAAGGCTGCATTTTTACAACCCATGGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctt < 2:546954‑M1/151‑14 (MQ=255) cAAAGGCTGCATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggcttt > 1:1018854‑M1/1‑137 (MQ=255) cAAAGGCTGCATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggcttt < 1:5209012‑M1/151‑15 (MQ=255) cAAAGGCTGCATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggcttt > 2:1921106‑M1/1‑137 (MQ=255) aaGGCTGCATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGCTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGGACAGGGAcatgcacaggctttca < 2:4746282‑M1/151‑17 (MQ=255) aGGCTGCATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcag < 1:3379734‑M1/151‑18 (MQ=255) ggCTGCATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcagg > 1:4946799‑M1/1‑133 (MQ=255) ggCTGCATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggcttacagg > 1:4310925‑M1/1‑133 (MQ=255) gCTGCATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcagga < 1:1093169‑M1/151‑20 (MQ=255) cTGCATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggat < 1:319045‑M1/151‑21 (MQ=255) gCATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatga > 1:1141388‑M1/1‑129 (MQ=255) gCATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatga < 2:1366112‑M1/151‑23 (MQ=255) cATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaa < 2:762842‑M1/151‑24 (MQ=255) aTTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaag < 2:2305332‑M1/151‑25 (MQ=255) aTTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaag < 2:179768‑M1/151‑25 (MQ=255) aTTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaag < 2:2774792‑M1/151‑25 (MQ=255) tACAACCCATTGAAAAGCATGGTTTATTCACTGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaa < 1:3739289‑M1/151‑30 (MQ=255) aCAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaag > 2:4128701‑M1/1‑121 (MQ=255) cAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaagg > 1:3601810‑M1/1‑120 (MQ=255) cAACCCAGTGAAAGGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaagg < 1:769560‑M1/151‑32 (MQ=255) ccccctTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggac < 1:5076267‑M1/150‑34 (MQ=255) aCCTATTGAAAAGGATGGTTTATTCACCGGTGAAGAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggac < 2:4296638‑M1/151‑34 (MQ=255) cccATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacg > 2:13158‑M1/1‑117 (MQ=255) tGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgca < 2:3990675‑M1/151‑40 (MQ=255) aaaaGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaag < 1:4729656‑M1/151‑42 (MQ=255) aGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaag > 1:613006‑M1/1‑107 (MQ=255) aGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaag > 1:3823136‑M1/1‑107 (MQ=255) gCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagc < 1:4203905‑M1/151‑46 (MQ=255) tGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgat < 2:4797947‑M1/151‑49 (MQ=255) ggTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatt > 1:261177‑M1/1‑102 (MQ=255) gTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgattt > 1:3972056‑M1/1‑101 (MQ=255) ttATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttca < 2:2339541‑M1/151‑53 (MQ=255) aTTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatc < 1:1971753‑M1/151‑55 (MQ=255) aTTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagagatttcatc > 1:1592144‑M1/1‑97 (MQ=255) tCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcag < 1:1384968‑M1/151‑57 (MQ=255) tCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcag > 1:2117380‑M1/1‑95 (MQ=255) tCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcag < 2:5384185‑M1/151‑57 (MQ=255) cACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcagg > 1:2308415‑M1/1‑94 (MQ=255) cACCAGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcagg < 2:3183692‑M1/151‑58 (MQ=255) aCCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcagga > 2:644615‑M1/1‑93 (MQ=255) ccGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggat < 1:799968‑M1/151‑60 (MQ=255) ccGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggat > 1:256258‑M1/1‑92 (MQ=255) cGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatg < 1:627189‑M1/151‑61 (MQ=255) ggTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatga > 2:734892‑M1/1‑90 (MQ=255) tGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatg > 1:4108204‑M1/1‑88 (MQ=255) tAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttg > 1:3774346‑M1/1‑84 (MQ=255) aaaTGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgg < 2:3522252‑M1/151‑69 (MQ=255) aaaTGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgg > 2:1144127‑M1/1‑83 (MQ=255) gtCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaag < 1:3574900‑M1/151‑75 (MQ=255) ccGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagca < 1:3930424‑M1/151‑77 (MQ=255) cgGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcaggg > 1:5034837‑M1/1‑72 (MQ=255) ggAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcaggga < 1:2923553‑M1/151‑81 (MQ=255) ggAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaagaacggcgcaagaagcgatttcatcaggatgatgtttgggaccagcaggga > 2:4178551‑M1/1‑71 (MQ=255) gAAATACCTTGCGAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATGCGAACTGTGCACAGGGAcgtgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggac < 2:2674300‑M1/151‑82 (MQ=255) aaaTACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggact < 2:5183529‑M1/151‑83 (MQ=255) tACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacg > 2:503983‑M1/1‑66 (MQ=255) cTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcag > 1:4348058‑M1/1‑63 (MQ=255) cTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcag < 2:4348058‑M1/119‑57 (MQ=255) gCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacg > 2:122749‑M1/1‑60 (MQ=255) gCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacg < 1:122749‑M1/145‑86 (MQ=255) gTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgt < 1:662540‑M1/151‑97 (MQ=255) ccATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgg > 2:5221300‑M1/1‑53 (MQ=255) ccATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtatgggacaagcagggactacggaaaaaaatgtgg > 1:5274727‑M1/1‑53 (MQ=255) cATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtggg < 1:3277705‑M1/151‑100 (MQ=255) cATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtggg < 1:3899006‑M1/151‑100 (MQ=255) cGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgg < 1:550814‑M1/151‑103 (MQ=255) tGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgggtca < 1:1470794‑M1/151‑107 (MQ=255) gCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgggtcaa < 2:2048805‑M1/151‑108 (MQ=255) cgcgcCGGGCTGAACCCGCTAGTATTCGAACAGTGCACAGGGGcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcaaaaaaaaagaaaaaaaatgtgggcgggtcaaa < 2:242040‑M1/149‑109 (MQ=255) cGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgggtccaaccgcc > 2:1625576‑M1/1‑38 (MQ=255) cGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgggtcaaaccgcc > 1:993272‑M1/1‑38 (MQ=255) gggCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgggtcaaaccgccc > 1:3303421‑M1/1‑37 (MQ=255) gggCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgggtcaaaccgccc < 2:4920692‑M1/151‑115 (MQ=255) cccGGTAGTATTCGAACTGTGAACAGGGAcgtgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgggtcaaaccgccccttttttt < 2:2960250‑M1/151‑123 (MQ=255) ccGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgggtcaaaccgcccctttttttg > 2:249756‑M1/1‑28 (MQ=255) cGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgggtcaaaccgcccctttttttgc > 1:1938009‑M1/1‑27 (MQ=255) gCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgggtcaaaccgcccctttttttgcc > 1:4541349‑M1/1‑26 (MQ=255) cTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgggtcaaaccgcccctttttttgccc > 1:1508199‑M1/1‑25 (MQ=255) tAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgggtcaaaccgcccctttttttgcccg > 1:342979‑M1/1‑24 (MQ=255) gTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgggtcaaaccgcccctttttttgcccgta > 1:2167362‑M1/1‑22 (MQ=255) tATTCGATCTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgggtcaaaccgcccctttttttgcccgtag < 2:3334813‑M1/151‑131 (MQ=255) tATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgggtcaaaccgcccctttttttgcctgtag < 2:4483113‑M1/151‑131 (MQ=255) aTTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgggtcaaaccgcccctttttttgcccgtagg > 2:3191674‑M1/1‑20 (MQ=255) gAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgggtcaaaccgcccctttttttgcccgtaggaaaa > 2:4838647‑M1/1‑16 (MQ=255) tcaagaaTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAGTGATTCCACGCTGATCCGGACACTCATTCCACGAGCATCCGGACACCGACTCCACGGTCATCCGGACACTTTTCTGGCAGGCAGCCACGCAGGAt > 2:4516884/7‑151 (MQ=11) acaGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgggtcaaaccgcccctttttttgcccgtaggaaaacaaaaaagg > 2:134378‑M1/1‑7 (MQ=255) acaGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgggtcaaaccgcccctttttttgcccgtaggaaaacaaaaaagg < 2:3856042‑M1/151‑145 (MQ=255) caGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgggtcaaaccgcccctttttttgcccgtaggaaaacaaaaaaggc > 1:3054881‑M1/1‑6 (MQ=255) aGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgggtcaaaccgcccctttttttgcccgtaggaaaacaaaaaaggcc < 1:2258708‑M1/151‑147 (MQ=255) aGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgggtcaaaccgcccctttttttgcccgtaggaaaacaaaaaaggcc < 1:3678191‑M1/151‑147 (MQ=255) | ATCAAAGTCGTTTCCAAAGGCTGCATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGATGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAGTGATTCCACGCTGATCCGGACACTCATTCCACGAGCATCCGGACACCGACTCCACGGTCATCCGGACACTTTTCTGGCAGGCAGCCACGCAGGATTTAT > CP009974/3486622‑3486920 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |