New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009974 = 53246810 (0.000)242 (0.930) 154/286 0.4 100% intergenic (+71/‑180) RPPX_23670/RPPX_23675 histidine kinase/integrase
?CP009974 5327261 = NA (NA)intergenic (+113/‑39) RPPX_23680/RPPX_23685 ATPase AAA/transposase

Only 100 of 292 total aligned reads displayed.

TGGGTTCGGGCTGGAGATTGGCGAAAGCGAATTGGGTGGGGCCAGGCTGGTATTGCACTGCCCGCTTGCGGATCTAGGCAAGTAAAAGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCACGCCCGCTCCCACAAGTTGGCGCGACATTTGGACTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP009974/5324526‑5324681
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gactgccCCCAAGAAGTTGGACACTAATCCAACCCTTGGGGGATCTATGGGTAAGTACACCGAGCAATTCAAGCTCACAGCGATCACAGCCTACCTGGACGGCAGCAACGGTTTCCGAAAGGTGGCTCAACACTTAGGTATCGATTTCAGTCTGCTT  >  CP009974/5327261‑5327410
                                                                                                                                                                                                                                                                                                                  
 GGGTTCGGGCTGGAGATTGGCGAAAGCGAATTGGGTGGGGCCAGGCTGGTATTGCACTGCCCGCTTGCGGATCTAGGCAAGTAAAAGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCACGCCCCGTCCCCCAAGTTGGCGCGGCATTTGGAC                                                                                                                                                            >  2:5312414/1‑151
       GGGCTGGAGATTGGCGAAAGCGAATTGGGTGGGGCCAGGCTGGTATTGCACTGCCCGCTTGCGGATCTAGGCAAGTAAAAGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCACGCCCGCTCCCACAAGTTGGCGCGACATTTGGACTGCCCC                                                                                                                                                      <  1:5415257/151‑1
              AGATTGGCGAAAGCGAATTGGGTGGGGCCAGGCTGGTATTGCACTGCCCGCTTGCGGATCTAGGCAAGTAAAAGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCACGCCCGCTCCCACAAGTTGGCGCGACATTTGGACTGCCCCCAAGAAG                                                                                                                                               >  1:1031285/1‑151
               GATTGGCGAAAGCGAATTGGGTGGGGCCAGGCTGGTATTGCACTGCCCGCTTGCGGATCTAGGCAAGTAAAAGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCACGCCCGCTCCCACAAGTTGGCGCGACATTTGGACTGCCCCCAAGAAGT                                                                                                                                              <  1:1042406/151‑1
               GATTGGCGAAAGCGAATTGGGTGGGGCCAGGCTGGTATTGCACTGCCCGCTTGCGGATCTAGGCAAGTAAAAGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCACGCCCGCTCCCACAAGTTGGCGCGACATTTGGACTGCCCCCAAGAAGT                                                                                                                                              <  1:1307974/151‑1
               GATTGGCGAAAGCGAATTGGGTGGGGCCAGGCTGGTATTGCACTGCCCGCTTGCGGATCTAGGCAAGTAAAAGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCACGCCCGCTCCCACAAGTTGGCGCGACATTTGGACTGCCCCCAAGAAGT                                                                                                                                              >  1:2841840/1‑151
                ATTGGCGAAAGCGAATTGGGTGGGGCCAGGCTGGTATTGCACTGCCCGCTTGCGGATCTAGGCAAGTAAAAGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCACGCCCGCTCCCACAAGTTGGCGCGACATTTGGACTGCCCCCAAGAAGTT                                                                                                                                             <  2:2923197/151‑1
                ATTGGCGAAAGCGAATTGGGTGGGGCCAGGCTGGTATTGCACTGCCCGCTTGCGGATCTAGGCAAGTAAAAGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCACGCCCGCTCCCACAAGTTGGCGCGACATTTGGACTGCCCCCAAGAAGTT                                                                                                                                             >  1:3990898/1‑151
                  TGGCGAAAGCGAATTGGGTGGGGCCAGGCTGGTATTGCACTGCCCGCTTGCGGATCTAGGCAAGTAAAAGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCACGCCCGCTCCCACAAGTTGGCGCGACATTTGGACTGCCCCCAAGAAGTTGG                                                                                                                                           <  2:2424273/151‑1
                  TGGCGAAAGCGAATTGGGTGGGGCCAGGCTGGTATTGCACTGCCCGCTTGCGGATCTAGGCAAGTAAAAGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCACGCCCGCTCCCACAAGTTGGCGCGACATTTGGACTGCCCCCAAGAAGTTGG                                                                                                                                           >  1:4667813/1‑151
                    GCGAAAGCGAATTGGGTGGGGCCAGGCTGGTATTGCACTGCCCGCTTGCGGATCTAGGCAAGTAAAAGCTGGGGCCGCTTTGCGGCCCTTCACGGGCCCGCCCGCCCCCACATGTTCGCGCGACCCTTGCCATGCCCCCAAGAAGTTGGcc                                                                                                                                         >  2:1292944/1‑149
                               TTGGGTGGGGCCAGGCTGGTATTGCACTGCCCGCTTGCGGATCTAGGCAAGTAAAAGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCACGCCCGCTCCCACAAGTTGGCGCGACATTTGGACTGCCCCCAAGAAGTTGGACACTAATCCAAC                                                                                                                              >  2:829045/1‑151
                                 GGGTGGAGCCAGGCTGGTATTGCACTGCCCGCTTGCGGATCTAGGCAAGTAAAAGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCACGCCCGCTCCCACAAGTTGGCGCGACATTTGGACTGCCCCCAAGAAGTTGGACACTAATCCAACCC                                                                                                                            <  1:2240488/151‑1
                                  GGTGGGGCCAGGCTGGTATTGCACTGCCCGCTTGCGGATCTAGGCAAGTAAAAGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCACGCCCGCTCCCACAAGTTGGCGCGACATTTGGACTGCCCCCAAGAAGTTGGACACTAATCCAACCCT                                                                                                                           >  2:4472275/1‑151
                                   GTGGGTCCAGGCTGGTATTGCACTGCCCGCTTGCGGATCTAGGCAAGTAAAAGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCACGCCCGCTCCCACAAGTTGGCGCGACATTTGGACTGCCCCCAAGAAGTTGGACACTAACCCAACCCTT                                                                                                                          <  2:4199390/151‑1
                                    TGGGGCCAGGCTGGTATTGCACTGCCCGCTTGCGGATCTAGGCAAGTAAAAGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCACGCCCGCTCCCACAAGTTGGCGCGACATTTGGACTGCCCCCAAGAAGTTGGACACTAATCCAACCCTTG                                                                                                                         >  1:3537305/1‑151
                                       GGCCAGGCTGGTATTGCACTGCCCGCTTGCGGATCTAGGCAAGTAAAAGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCACGCCCGCTCCCACAAGTTGGCGCGACATTTGGACTGCCCCCAAGAAGTTGGACACTAATCCAACCCTTGGGG                                                                                                                      >  2:1345155/1‑151
                                        GCCAGGCTGGTATTGCACTGCCCGCTTGCGGATCTAGGCAAGTAAAAGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCACGCCCGCTCCCACAAGTTGGCGCGACATTTGGACTGCCCCCAAGAAGTTGGACACTAATCCAACCCTTGGGGG                                                                                                                     >  1:2773709/1‑151
                                          CAGGCTGGTATTGCACTGCCCGCTTGCGGATCTAGGCAAGTAAAAGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCACGCCCGCTCCCACAAGTTGGCGCGACATTTGGACTGCCCCCAAGAAGTTGGACACTAATCCAACCCTTGGGGGAT                                                                                                                   <  1:1382191/151‑1
                                              CTGGTATTGCACTGCCCGCTTGCGGATCTAGGCAAGTAAAAGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCACGCCCGCTCCCACAAGTTGGCGCGACATTTGGACTGCCCCCAAGAAGTTGGACACTAATCCAACCCTTGGGGGATCTAT                                                                                                               >  1:2027784/1‑151
                                                GGTATTGCACTGCCCGCTTGCGGATCTAGGCAAGTAAAAGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCACGCCCGCTCCCACAAGTTGGCGCGACATTTGGACTGCCCCCAAGAAGTTGGACACTAATCCAACCCTTGTGGGATCTATGG                                                                                                             >  1:2035965/1‑151
                                                GGTATTGCACTGCCCGCTTGCGGATCTAGGCAAGTAAAAGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCACGCCCGCTCCCACAAGTTGGCGCGACATTTGGACTGCCCCCAAGAAGTTGGACACTAATCCAACCCTTGGGGGATCTATGG                                                                                                             >  2:904488/1‑151
                                                 GTATTGCACTGCCCGCTTGCGGATCTAGGCAAGTAAAAGCTGGGGCCGCGTTGCGGCCCTTCGCGGGCACGCCCGCTCCCACAAGTTGGCGCGACATTTGGACTGCCCCCAAGAAGTTGGACACTAATCCAACCCTTGGGGGATCTATGGG                                                                                                            <  2:4565866/151‑1
                                                     TGCACTGCCCGCTTGCGGATCTAGGCAAGTAAAAGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCACGCCCGCTCCCACAAGTTGGCGCGACATTTGGACTGCCCCCAAGAAGTTGGACACTAATCCAACCCTTGGGGGATCTATGGGTAAG                                                                                                        >  2:1793486/1‑151
                                                       CACTGCCCGCTTGCGGATCTAGGCAAGTAAAAGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCACGCCCGCTCCCACAAGTTGGCGCGACATTTGGACTGCCCCCAAGAAGTTGGACACTAATCCAACCCTTGGGGGATCTATGGGTAAGTA                                                                                                      <  1:4040121/151‑1
                                                         CTGCCCGCTTGCGGATCTAGGCAAGTAAAAGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCACGCCCGCTCCCACAAGTTGGCGCGACATTTGGACTGCCCCCAAGAAGTTGGACACTAATCCAACCCTTGGGGGATCTATGGGTAAGTACA                                                                                                    >  1:4187899/1‑151
                                                          TGCCCGCTTGCGGATCTAGGCAAGTAAAAGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCACGCCCGCTCCCACAAGTTGGCGCGACATTTGGACTGCCCCCAAGAAGTTGGACACTAATCCACCCCTTGGGGGATCTATGCGTCAGTACAC                                                                                                   >  2:3034258/1‑151
                                                          TGCCCGCTTGCGGATCTAGGCAAGTAAAAGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCACGCCCGCTCCCACAAGTTGGCGCGACATTTGGACTGCCCCCAAGAAGTTGGACACTAATCCAACCCCTGGGGGATCTATGGGTAAGTACAC                                                                                                   >  2:3006212/1‑151
                                                             CCGCTTGCGGATCTAGGCAAGTAAAAGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCACGCCCGCTCCCACAAGTTGGCGCGACATTTGGACTGCCCCCAAGAAGTTGGACACTAATCCAACCCTTGGGGGATCTATGGGTAAGTACACCGA                                                                                                >  2:2008074/1‑151
                                                              CGCTTGCGGATCTAGGCAAGTAAAAGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCACGCCCGCTCCCACAAGTTGGCGCGACATTTGGACTGCCCCCAAGAAGTTGGACACTAATCCAACCCTTGGGGGATCTATGGGTAAGTACACCGAG                                                                                               <  1:294317/151‑1
                                                               GCTTGCGGATCTAGGCAAGTAAAAGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCACGCCCGCTCCCACAAGTTGTCGCGACATTTGGACTGCCCCCAAGAAGTTGGACACTAATCCAACCCTTGGGGGATCTATGGGTAAGTACACCGAGC                                                                                              >  1:3437027/1‑151
                                                                 TTGCGGATCTAGGCAAGTAAAAGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCACGCCCGCTCCCACAAGTTGGCGCGACATTTGGACTGCCCCCAAGAAGTTGGACACTAATCCAACCCTTGGGGGATCTATGGGTAAGTACACCGAGCAA                                                                                            >  1:5287401/1‑151
                                                                   GCGGATCTAGGCAAGTAAAAGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCACGCCCGCTCCCACAAGTTGGCGCGACATTTGGACTGCCCCCAAGAAGTTGGACACTAATCCAACCCTTGGGGGTTCTATGGGTAAGTACACAGAGCAATT                                                                                          >  1:2323530/1‑151
                                                                   GCGGATCTAGGCAAGTAAAAGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCACGCCCGCTCCCACAAGTTGGCGCGACATTTGGACTGCCCCCAAGAAGTTGGACACTAATCCAACCCTTGGGGGATCTATGGGTAAGTACACCGAGCAATT                                                                                          <  1:3839776/151‑1
                                                                   GCGGATCTAGGCAAGTAAAAGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCACGCCCGCTCCCACAAGTTGGCGCGACATTTGGACTGCCCCCAAGAAGTTGGACACTAATCCAACCCTTGGGGGATCTATGGGTAAGTACACCGAGCAATT                                                                                          <  1:1982785/151‑1
                                                                   GCGGATCTAGGCAAGTAAAAGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCACGCCCGCTCCCACAAGTTGGCGCGACATTTGGACTGCCCCCAAGAAGTTGGACACTAATCCAACCCTTGGGGGATCTATGGGTAAGTACACCGAGCAATT                                                                                          <  1:5181708/151‑1
                                                                     GGATCTAGGCAAGTAAAAGCTGGGGCCGGTTTGCGGCCCTTCGCGGGCACGCCCGCTCCCACAAGTTGGCGCGACATTTGGACTGCCCCCAAGAAGTTGGACACTAATCCAACCCTTGGGGGATCTATGGGTAAGTACACCGAGCAATTCA                                                                                        <  2:3100210/151‑1
                                                                     GGATCTAGGCAAGTAAAAGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCACGCCCGCTCCCACAAGTTGGCGCGACATTTGGACTGCCCCCAAGAAGTTGGACACTAATCCAACCCTTGGGGGATCTATGGGTAAGTACACCGAGCAATTCA                                                                                        <  2:367074/151‑1
                                                                     GGATCTAGGCAAGTAAAAGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCACGCCCGCTCCCACAAGTTGGCGCGACATTTGGACTGCCCCCAAGAAGTTGGACACTAATCCAACCCTTGGGGGATCTATGGGTAAGTACACCGAGCAATTCA                                                                                        <  2:567619/151‑1
                                                                      GATCTAGGCAAGTAAAAGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCACGCCCGCTCCCACAAGTTGGCGCGACATTTGGACTGCCCCCAAGAAGTTGGACACTAATCCAACCCTTGGGGGATCTATGGGTAAGTACACCGAGCAATTCAA                                                                                       >  2:3527845/1‑151
                                                                        TCTAGGCAAGTAAAAGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCACGCCCGCTCCCACAAGTTGGCGCGACATTTGGACTGCCCCCAAGAAGTTGGACACTAATCCAACCCTTGGGGGATCTATGGGTAAGTACACCGAGCAATTCAAGC                                                                                     >  2:1915942/1‑151
                                                                           AGGCAAGTAAAAGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCACGCCCGCTCCCACAAGTTGGCGCGACATTTGGACTGCCCCCAAGAAGTTGGACACTAATCCAACCCTTGGGGGATCTATGGGTAAGTACACCGAGCAATTCAAGCTCA                                                                                  <  1:3744497/151‑1
                                                                           AGGCAAGTAAAAGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCACGCCCGCTCCCACAAGTTGGCGCGACATTTGGACTGCCCCCAAGAAGTTGGACACTAATCCAACCCTTGGGGGATCTATGGGTAAGTACACCGAGCAATTCAAGCTCA                                                                                  >  2:43216/1‑151
                                                                            GGCAAGTAACAGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCACGCCCGCTCCCACAAGTTGGCGCGACATTTGGACTGCCCCCAAGAAGTTGGACACTAATCCAACCCTTGGGGGATCTATGGGTAAGTACACCGAGCAATTCAAGCTCAC                                                                                 <  2:3934559/151‑1
                                                                            GGCAAGTAAAAGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCACGCCCGCTCCCACAAGTTGGCGCGACATTTGGACTGCCCCCAAGAAGTTGGACACTAATCCAACCCTTGGGGGATCTATGGGTAAGTACACCGAGCAATTCAAGCTCAC                                                                                 <  2:1449335/151‑1
                                                                             GCAAGTAAAAGCAGGGGCCGCTTTGCGGCCATTGGCGGGCACGCCCGCTCCCACAAGTAGGCGCGACATTTGGACTGCCCCCAAGAAGTTGGACAATAATCCAACCCTTGGGGGATCTATGGGTAAGTACAACGAGCAATTCAAGCTCACA                                                                                <  2:3195471/151‑1
                                                                               AAGTAAAAGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCACGCCCGCTCCCACAAGTTGGCGCGACATTTGGACTGCCCCCAAGAAGTTGGACACTAATCCAACCCTTGGGGGATCTATGGGTAAGTACACCGAGCAATTCAAGCTCACAGC                                                                              >  1:3725503/1‑151
                                                                                   AAAAGCTGGGGCCGCTTTGCGGCCCGTCGCGGGCACGCCCGCTCCCACAAGTTGGCGCGACATTTGGACTGCCCCCAAGAAGTTGGACACTAATCCAACCCTTGGGGGATCTATGGGTAAGTACACCGAGCAATTCAAGCTCACAGCGATC                                                                          <  2:3831876/151‑1
                                                                                     AAGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCACGCCCGCTCCCACAAGTTGGCGCGACATTTGGACTGCCCCCAAGAAGTTGGACACTAATCCAACCCTTGGGGGATCTATGGGTAAGTACACCGAGCAATTCAAGCTCACAGCGATCAC                                                                        <  2:49198/151‑1
                                                                                         TGGGGCCGCTTTGCGGCCCTTCGCGGGCACGCCCGCTCCCACAAGTTGGCGCGACATTTGGACTGCCCCCAAGAAGTTGGACACTAATCCAACCCTTGGGGGATCTATGGGTAAGTACACCGAGCAATTCAAGCTCACAGCGATCACAGCC                                                                    >  2:3312409/1‑151
                                                                                         TGGGGCCGCTTTGCGGCCCTTCGCGGGCACGCCCGCTCCCACAAGTTGGCGCGACATTTGGACTGCCCCCAAGAAGTTGGACACTAATCCAACCCTTGGGGGATCTATGGGTAAGTACACCGAGCAATTCAAGCTCACAGCGATCACAGCC                                                                    <  2:360055/151‑1
                                                                                                  TTTGCGGCCCTTCGCGGGCACGCCCGCTCCCACAAGTTGGCGCGACATTTGGACTGCCCCCAAGAAGTTGGACACTAATCCAACCCTTGGGGGATCTATGGGTAAGTACACCGAGCAATTCAAGCTCACAGCGATCACAGCCTACCTGGAC                                                           >  1:4622629/1‑151
                                                                                                  TTTGCGGCCCTTCGCGGGCACGCCCGCTCCCACAAGTTGGCGCGACATTTGGACTGCCCCCAAGAAGTTGGACACTAATCCAACCCTGGGGGGATCTATGGGTAAGTACACCGAGCAATTCAAGCTCACAGCGATCACAGCCTACCTGGAC                                                           >  1:1880061/1‑151
                                                                                                   TTGCGGCCCTTCGCGGGCACGCCCGCTCCCACAAGTTGGCGCGACATTTGGACTGCCCCCAAGAAGTTGGACACTAATCCAACCCTTGGGGGATCTATGGGTAAGTACACCGAGCAATTCAAGCTCACAGCGATCACAGCCTACCTGGACG                                                          >  2:1196692/1‑151
                                                                                                    TGCGGCCCTTCGCGGGCACGCCCGCTCCCACAAGTTGGCGCGACATTTGGACTGCCCCCAAGAAGTTGGACACTAATCCACCCCTTGGGGGATCTATGGGTAAGTACACCGAGCAATTCAAGCTCACAGCGATCACAGCCTACCTGGACGG                                                         >  1:4646357/1‑151
                                                                                                      CGGCCCTTCGCGGGCACGCCCGCTCCCACAAGTTGGCGCGACATTTGGACTGCCCCCAAGAAGTTGGACACTAATCCAACCCTTGGGGGATCTATGGGTAAGTACACCGAGCAATTCAAGCTCACAGCGATCACAGCCTACCTGGACGGCA                                                       <  1:446364/151‑1
                                                                                                       GGCCCTTCGCGGGCACGCCCGCTCCCACAAGTTGGCGCGACATTTGGACTGCCCCCAAGAAGTTGGACACTAATCCAACCCTTGGGGGATCTATGGGTAAGTACACCGAGCAATTCAAGCTCACAGCGATCACAGCCTACCTGGACGGCAG                                                      <  1:3143191/151‑1
                                                                                                          CCTTCGCGGGCACGCCCGCTCCCACAAGTTGGCGCGACATTTGGACTGCCCCCAAGAAGTTGGACACTAATCCAACCCTTGGGGGATCTATGGGTAAGTACACCGAGCAATTCAAGCTCACAGCGATCACAGCCTACCTGGACGGCAGCAA                                                   <  1:1183853/151‑1
                                                                                                           CTTCGCGGGCACGCCCGCTCCCACAAGTTGGCGCGACATTTGGACTGCCCCCAAGAAGTTGGACACTAATCCAACCCTTGGGGGATCTATGGGTAAGTACACCGAGCAATTCAAGCTCACAGCGATCACAGCCTACCTGGACGGCAGCAAC                                                  >  1:2366856/1‑151
                                                                                                            TTCGCGGGCACGCCCGCTCCCACAAGTTGGCGCGACATTTGGACTGCCCCCAAGAAGTTGGACACTAATCCAACCCTTGGGGGATCTATGGGTAAGTACACCGAGCAATTCAAGCTCACAGCGATCACAGCCTACCTGGACGGCAGCAACG                                                 <  2:3774905/151‑1
                                                                                                             TCGCGGGCACGCCCGCTCCCACAAGTTGGCGCGACATTTGGACTGCCCCCAAGAAGTTGGACACTAATCCAACCCTTGGGGGATCTATGGGTAAGTACACCGAGCAATTCAAGCTCACAGCGATCACAGCCTACCTGGACGGCAGCAACGG                                                >  2:2475496/1‑151
                                                                                                                 GGGCACGCCCGCTCCCACAAGTTGGCGCGACATTTGGACTGCCCCCAAGAAGTTGGACACTAATCCAACCCTTGGGGGATCTATGGGTAAGTACACCGAGCAATTCAAGCTCACAGCGATCACAGCCTACCTGGACGGCAGCAACGGTTTC                                            <  1:177469/151‑1
                                                                                                                  ggaACGCACGCTCGAACAAGTTGGCGCGACATTTGGACTGCACCCAAGAAGTTGGACACTAATCCAACCCTTGGGGGATCTATGGGTAAGTACACCGAGCAATTCAAGCTCACAGCGATCACAGCCTACCTGGACGGCAGCAACGGTTTCC                                           <  2:1656572/148‑1
                                                                                                                  GGCACGCCCGCTCCCACAAGTTGGCGCGACATTTGGACTGCCCCCAAGAAGTTGGACACTAATCCAACCCTTGGGGGATCTATGGGTAAGTACACCGAGCAATTCAAGCTCACAGCGATCACAGCCTACCTGGACGGCAGCAACGGTTTCC                                           >  2:5124362/1‑151
                                                                                                                     ACGCCCGCTCCCACAAGTTGGCGCGACATTTGGACTGCCCCCAAGAAGTTGGACACTAATCCAACCCTTGGGGGATCTATGGGTAAGTACACCGAGCAATTCAAGCTCACAGCGATCACAGCCTACCTGGACGGCAGCAACGGTTTCCGAA                                        >  2:143180/1‑151
                                                                                                                      CGCCCGCTCCCACAAGTTGGCGCGACATTTGGACTGCCCCCAAGAAGTTGGACACTAATCCAACCCTTGGGGGATCTATGGGTAAGTACACCGAGCAATTCAAGCTCACAGCGATCACAGCCTACCTGGACGGCAGCAACGGTTTCCGAAA                                       <  1:3329221/151‑1
                                                                                                                        CCCGCTCCCACAAGTTGGCGCGACATTTGGACTGCCCCCAAGAAGTTGGACACTAATCCAACCCTTGGGGGATCTATGGGTAAGTACACCGAGCAATTCAAGCTCACAGCGATCACAGCCTACCTGGACGGCAGCAACGGTTTCCGAAAGG                                     >  2:708221/1‑151
                                                                                                                          CGCTCCCACAAGTTGGCGCGACATTTGGACTGCCCCCAAGAAGTTGGACACTAATCCAACCCTTGGGGGATCTATGGGTAAGTACACCGAGCAATTCAAGCTCACAGCGATCACAGCCTACCTGGACGGCAGCAACGGTTTCCGAAAGGTG                                   >  2:1065488/1‑151
                                                                                                                          CGCTCCCACAAGTTGGCGCGACATTTGGACTGCCCCCAAGAAGTTGGACACTAATCCAACCCTTGGGGGATCTATGGGTAAGTACACCGAGCAATTCAAGCTCACAGCGATCACAGCCTACCTGGACGGCAGCAACGGTTTCCGAAAGGTG                                   <  1:4975713/151‑1
                                                                                                                           GCTCCCACAAGTTGGCGCGACATTTGGACTGCCCCCAAGAAGTTGGACACTAATCCAACCCTTGGGGGATCTATGGGTAAGTACACCGAGCAATTCAAGCTCACAGCGATCACAGCCTACCTGGACGGCAGCAACGGTTTCCGAAAGGTGG                                  >  1:112417/1‑151
                                                                                                                            CTCCCACAAGTTGGCGCGACATTTGGACTGCCCCCAAGAAGTTGGACACTAATCCAACCCTTGGGGGATCTATGGGTAAGTACACCGAGCAATTCAAGCTCACAGCGATCACAGCCTACCTGGACGGCAGCAACGGTTTCCGAAAGGTGGC                                 >  1:4811686/1‑151
                                                                                                                             TCCCACAAGTTGGCGCGACATTTGGACTGCCCCCAAGAAGTTGGACACTAATCCAACCCTTGGGGGATCTATGGGTAAGTACACCGAGCAATTCAAGCTCACAGCGATCACAGCCTACCTGGACGGCAGCAACGGTTTCCGAAAGGTGGCT                                >  1:2095830/1‑151
                                                                                                                                 ACAAGTTGGCGCGACATTTGGACTGCCCCCAAGAAGTTGGACACTAATCCAACCCTTGGGGGATCTATGGGTAAGTACACCGAGCAATTCAAGCTCACAGCGATCACAGCCTACCTGGACGGCAGCAACGGTTTCCGAAAGGTGGCTCAAC                            <  1:1516320/151‑1
                                                                                                                                    AGTTGGCGCGACATTTGGACTGCCCCCAAGAAGTTGGACACTAATCCAACCCTTGGGGGATCTATGGGTAAGTACACCGAGCAATTCAAGCTCACAGCGATCACAGCCTACCTGGACGGCAGCAACGGTTTCCGAAAGGTGGCTCAACACT                         >  1:422891/1‑151
                                                                                                                                    AGTTGGCGCGACATTTGGACTGCCCCCAAGAAGTTGGACACTAATCCAACCCTTGGGGGATCTATGGGTAAGTACACCGAGCAATTCAAGCTCACAGCGATCACAGCCTACCTGGACGGCAGCAACGGTTTCCGAAAGGTGGCTCAACACT                         >  1:842720/1‑151
                                                                                                                                       TGGCGCGACATTTGGACTGCCCCCAAGAAGTTGGACACTAATCCAACCCTTGGGGGATCTATGGGTAAGTACACCGAGCAATTCAAGCTCACAGCGATCACAGCCTACCTGGACGGCAGCAACGGTTTCCGAAAGGTGGCTCAACACTTAG                      <  2:4411050/151‑1
                                                                                                                                       TGGCGCGACATTTGGACTGCCCCCAAGAAGTTGGACACTAATCCAACCCTTGGGGGATCTATGGGTAAGTACACCGAGCAATTCAAGCTCACAGCGATCACAGCCTACCTGGACGGCAGCAACGGTTTCCGAAAGGTGGCTCAACACTTAG                      >  1:620473/1‑151
                                                                                                                                        GGCGCGACATTTGGACTGCCCCCAAGAAGTTGGACACTAATCCAACCCTTGGGGGATCTATGGGTAAGTACACCGAGCAAGTCAAGCTCACAGCGATCACAGCCTACCTGGACGGCAGCAACGGTTTCCGAAAGGTGGCTCAACACTTAGG                     >  2:1744308/1‑151
                                                                                                                                         GCGCGACATTTGGACTGCCCCCAAGAAGTTGGACACTAATCCAACCCTTGGGGGATCTATGGGTAAGTACACCGAGCAATTCAAGCTCACAGCGATCACAGCCTACCTGGACGGCAGCAACGGTTTCCGAAAGGTGGCTCAACACTTAGGT                    <  2:4667813/151‑1
                                                                                                                                          CGCGACATTTGGACTGCCCCCAAGAAGTTGGACACTAATCCAACCCTTGGGGGATCTATGGGTAAGTACACCGAGCAATTCAAGCTCACAGCGATCACAGCCTACCTGGACGGCAGCAACGGTTTCCGAAAGGTGGCTCAACACTTAGGTA                   >  2:3862436/1‑151
                                                                                                                                             GACATTTGGACTGCCCCCAAGAAGTTGGACACTAATCCAACCCTTGGGGGATCTATGGGTAAGTACACCGAGCAATTCAAGCTCACAGCGATCACAGCCTACCTGGACGGCAGCAACGGTTTCCGAAAGGTGGCTCAACACTTAGGTATCG                <  2:1367358/151‑1
                                                                                                                                              ACATTTGGACTGCCCCCAAGAAGTTGGACACTAATCCAACCCTTGGGGGATCTATGGGTAAGTACACCGAGCAATTCAAGCTCACAGCGATCACAGCCTACCTGGACGGCAGCAACGGTTTCCGAAAGGTGGCTCAACACTTAGGTATCGA               <  1:4910626/151‑1
                                                                                                                                               CATTTGGACTGCCCCCAAGAAGTTGGACACTAATCCAACCCTTGGGGGATCTATGGGTAAGTACACCGAGCAATTCAAGCTCACAGCGATCACAGCCTACCTGGACGGCAGCAACGGTTTCCGAAAGGTGGCTCAACACTTAGGTATCGAT              <  2:2280884/151‑1
                                                                                                                                                 TTTGGACTGCCCCCAAGAAGTTGGACACTAATCCAACCCTTGGGGGATCTATGGGTAAGTACACCGAGCAATTCAAGCTCACAGCGATCACAGCCTACCTGGACGGCAGCAACGGTTTCCGAAAGGTGGCTCAACACTTAGGTATCGATTT            >  2:4832587/1‑151
                                                                                                                                                 TTTGGACTGCCCCCAAGAAGTTGGACACTAATCCAACCCTTGGGGGATCTATGGGTAAGTACACCGAGCAATTCAAGCTCACAGCGATCACAGCCTACCAGGACGGCAGCAACGGTTTCCGAAAGGTGGCTCAACACTTAGGTATCGATgt            >  2:2782688/1‑149
                                                                                                                                                    ggcCTGCCCCCAAGAAGTTGGACACCAATCCCACCCTTGGGGGATCTATGGGTAAGTACACCGAGCAATTCAAGCTCACAGCGATCACAGCCTACCTGGACGGCAGCAACGGTTTCCGAAAGGTGGCTCAACACTTAGGTATCGATTTCAG         <  1:5044160/148‑1
                                                                                                                                                    GGACTGCCCCCAAGAAGTTGGACACTAATCCAACCCTTGGGGGATCTATGGGTAAGTACACCGAGCAATTCAAGCTCACAGCGATCACAGCCTACCTGGACGGCAGCAACGGTTTCCGACAGGTGGCTCAACACTTAGGTATCGATTTCAG         >  2:1012157/1‑151
                                                                                                                                                    GGACTGCCCCCAAGAAGTTGGACACTAATCCAACCCTTGGGGGATCTATGGGTAAGTACACCGAGCAATTCAAGCTCACAGCGATCACAGCCTACCTGGACGGCAGCAACGGTTTCCGAAAGGTGGCTCAACACTTAGGTATCGATTTCAG         <  2:5192377/151‑1
                                                                                                                                                     GACTGCCCCCAAGAAGTTGGACACTAATCCAACCCTTGGGGGATCTATGGGTAAGTACACCGAGCAATTCAAGCTCACAGCGATCACAGCCTACCTGGACGGCAGCAACGGTTTCCGAAAGGTGGCTCAACACTTAGGTATCGATTTCAGT        >  2:4552421/1‑151
                                                                                                                                                      ACTGCCCCCAAGAAGTTGGACACTAATCCAACCCTTGGGGGATCTATGGGTAAGTACACCGAGCAATTCAAGCTCACAGCGATCACAGCCTACCTGGACGGCAGCAACGGTTTCCGAAAGGTGGCTCAACACTTAGGTATCGATTTCAGTC       >  1:880982/1‑151
                                                                                                                                                       CTGCCCCCAAGAAGTTGGACACTAATCCAGCCCTTGGGGGATCTATGGGTAAGTACACCGAGCAATTCAAGCTCACAGCGATCACAGCCTACCTGGACGGCAGCAACGGTTTCCGAAAGGTGGCTCAACACTTAGGTATCGATTTCAGTCT      <  2:1572475/151‑1
                                                                                                                                                       CTGCCCCCAAGAAGTTGGACACTAATCCAACCCTTGGGGGATCTATGGGTAAGTACACCGAGCAATTCAAGCTCACAGCGATCACAGCCTACCTGGACGGCAGCAACGGTTTCCGAAAGGTGGCTCAACACTTAGGTATCGATTTCAGTCT      <  1:1676432/151‑1
                                                                                                                                                       CTGCCCCCAAGAAGTTGGACACTAATCCAACCCTTGGGGGATCTATGGGTAAGTACACCGAGCAATTCAAGCTCACAGCGATCACAGCCTACCTGGACGGCAGCAACGGTTTCCGAAAGGTGGCTCAACACTTAGGTATCGATTTCAGTCT      <  1:1631637/151‑1
                                                                                                                                                       CTGCCCCCAAGAAGTTGGACACTAATCCAACCCTTGGGGGATCTATGGGTAAGTACACCGAGCAATTCAAGCTCACAGCGATCACAGCCTACCTGGACGGCAGCAACGGTTTCCGAAAGGTGGCTCAACACTTAGGTATCGATTTCAGTCT      <  1:2676504/151‑1
                                                                                                                                                        TGCCCCCAAGAAGTTGGACACTAATCCAACCCTTGGGGGATCTATGGGTAAGTACACCGAGCAATTCAAGCTCACAGCGATCACAGCCTACCTGGACGGCAGCAACGGTTTCCGAAAGGTGGCTCAACACTTAGGTATCGATTTCAGTCTG     <  1:2472174/151‑1
                                                                                                                                                        TGCCCCCAAGAAGTTGGACACTAATCCAACCCTTGGGGGATCTATGGGTAAGTACACCGAGCAATTCAAGCTCACAGCGATCACAGCCTACCTGGACGGCAGCAACGGTTTCCGAAAGGTGGCTCAACACTTAGGTATCGATTTCAGTCTG     >  2:2725660/1‑151
                                                                                                                                                         GCCCCCAAGAAGTTGGACACTAATCCAACCCTTGGGGGATCTATGGGTAAGTACACCGAGCAATTCAAGCTCACAGCGATCACAGCCTACCTGGACGGCAGCAACGGTTTCCGAAAGGTGGCTCAACACTTAGGTATCGATTTCAGTCTGC    <  1:2181925/151‑1
                                                                                                                                                         GCCCCCAAGAAGTTGGACACCAATCCAACCCTTGGGGGATCTATGGGTAAGTACACCGAGCAATTCAAGCTCACAGCGATCACAGCCTACCTGGACGGCAGCAACGGTTTCCGAAAGGTGGCTCAACACTTAGGTATCGATTTCAGTCTGC    <  1:3248449/151‑1
                                                                                                                                                          CCCCCACGAAGTTGGACACTAATCCACCCCTTGGGGAATCTATGGGTAAGTACACCGTGCAATTCAAGCTCACAGCGATCACAGCCTACCTGGACGGCAGCAACGGTTTCCGAAAGGTGGCTCAACACTTAGGTATCGATTTCAGTCTGCT   <  2:263167/151‑1
                                                                                                                                                           CCCCAAGAAGTTGGACACCAATCCAACCCTTGGGGGATCTATGGGTAAGTACACCGAGCAATTCAAGCTCACAGCGATCACAGCCTACCTGGACGGCAGCAACGGTTTCCGAAAGGTGGCTCAACACTTAGGTATCGATTTCAGTCTGCTT  >  2:2046831/1‑151
                                                                                                                                                                                                                                                                                                                  
TGGGTTCGGGCTGGAGATTGGCGAAAGCGAATTGGGTGGGGCCAGGCTGGTATTGCACTGCCCGCTTGCGGATCTAGGCAAGTAAAAGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCACGCCCGCTCCCACAAGTTGGCGCGACATTTGGACTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP009974/5324526‑5324681
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gactgccCCCAAGAAGTTGGACACTAATCCAACCCTTGGGGGATCTATGGGTAAGTACACCGAGCAATTCAAGCTCACAGCGATCACAGCCTACCTGGACGGCAGCAACGGTTTCCGAAAGGTGGCTCAACACTTAGGTATCGATTTCAGTCTGCTT  >  CP009974/5327261‑5327410

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.