| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009974 | 3237442 = | 269 (0.990) | 354 (1.310) | 199/298 | 0.0 | 57.0% | coding (2012/2736 nt) | secA | preprotein translocase subunit SecA |
| ? | CP009974 | 3486774 = | NA (NA) | noncoding (1/2595 nt) | ISS12 | repeat region | |||||
Only 100 of 646 total aligned reads displayed.
GCATGGTCACCAACGCTATCGAGAAAGCCCAGCGCAAGGTCGAAGGCCGCAACTTCGACATTCGTAAGCAATTGCTCGAATATGACGACGTCGCCAACGAGCAGCGCAAGGTGATCTACCACATGCGCAACAGCCTGCTGGCCGCCGAGAACATTGGCGACACCATCGTCGAATTCCGCAAGGAAGTACTGGACGCTACCATCAGCCAGCACATTCCGCCGCAGTCGCTGCCAGAGCAGTGGGACGTAGCCGGCCTGGAGGCTTCGCTGGCCAGCGATTTCGCCATCAAGTTGCCGATTCA > CP009974/3237292‑3237592 | tgaataaatcctgcgtggctgcctgccagaaaagtgtccggatgaccgtggagtcggtgtccggatgctcgtggaatgagtgtccggatcagcgtggaatcactgtccggatgcgcgtggaatgggtgtccgagtcagcgtggaatccgca > 2:3658201‑M1/151‑151 (MQ=255)tgaataaatcctgcgtggctgcctgccagaaaagtgtccggatgaccgtggagtcggtgtccggatgctcgtggaatgagtgtccggatcagcgtggaatcactgtccggatgcgcgtggaatgggtgtccgagtcagcgtggaatccgca > 2:786926‑M1/151‑151 (MQ=255)tgaataaatcctgcgtggctgcctgccagaaaagtgtccggatgaccgtggagtcggtgtccggatgctcgtggaatgagtgtccggatcagcgtggaatcactgtccggatgcgcgtggaatgggtgtccgagtcagcgtggaatcagca < 2:4464674‑M1/1‑1 (MQ=255) gaataaatcctgcgtggctgcctgccagaaaagtgtccggatgaccgtggagtcggtgtccggatgctcgtggaatgagtgtccggatcagcgtggaatcactgtccggatgcgcgtggaatgggtgtccgagtcagcgtggaatccgcac < 1:2983850‑M1/2‑1 (MQ=255) gaataaatcctgcgtggctgcctgccagaaaagtgtccggatgaccgtggagtcggtgtccggatgctcgtggaatgagtgtccggatcagcgtggaatcactgtccggatgcgcgtggaatgggtgtccgagtcagcgtggaatccgcac < 1:4593083‑M1/2‑1 (MQ=255) ataaatcctgcgtggctgcctgccagaaaagtgtccggatgaccgtggagtcggtgtccggatgctcgtggaatgagtgtccggatcagcgtggaatcactgtccggatgcgcgtggaatgggtgtccgagtcagcgtggaatccgcACAt < 2:3587096‑M1/4‑1 (MQ=255) tCACCAACGCTATCGAGAAAGCCCAGCGCAAGGTCGAAGGCCGCAACTTCGACATTCGTAAGCAATTGCTCGAATATGACGACGTCGCCAACGAGCAGCGCAAGGTGATCTACCACATGCGCAACAGCCTGCTGGCCGCCGAGAACATTgg < 2:2895857/151‑1 (MQ=255) aatcctgcgtggctgcctgccagaaaagtgtccggatgaccgtggagtcggtgtccggatgctcgtggaatgagtgtccggatcagcgtggaatcactgtccggatgcgcgtggaatgggtgtccgagtcagcgtggaatccgcACATTgg > 1:4680002‑M1/145‑151 (MQ=255) tcctgcgtggctgcctgccagaaaagtgtccggatgaccgtggagtcggtgtccggatgctcgtggaatgagtgtccggatcagcgtggaatcactgtccggatgagcgtggaatgggtgtccgagtcagcgtggaatccgcACATTGGCg < 1:2293756‑M1/9‑1 (MQ=255) ctgcgtggctgcctgccagaaaagtgtccggatgaccgtggagtcggtgtccggatgctcgtggaatgcgtgtccggatcagcgtgcaatcactgtccgcatgcgcgcggcatgggtctccgactccgcgtggcatccccacattcgccac < 2:5218778‑M1/11‑7 (MQ=255) ctgcgtggctgcctgccagaaaagtgtccggatgaccgtggagtcggtgtccggatgctcgtggaatgagtgtccggatcagcgtggaatcactgtccggatgcgcgtggaatgggtgtccgagtcagcgtggaatccgcACATTGGCGac < 2:1801531‑M1/11‑1 (MQ=255) cAACGCTATCGAGAAAGCCCAGCGCAAGGTCGAAGGCCGCAACTTCGACATTCGTAAGCAATTGCTCGAATATGACGACGTCGCCAACGAGCAGCGCAAGGTGATCTACCACATGCGCAACAGCCTGCTGGCCGCCGAGAACATTGGCGac > 1:2648589/1‑151 (MQ=255) gtggctgcctgccagaaaagtgtccggatgaccgtggagtcggtgtccggatgctcgtggaatgagtgtccggatcagcgtggaatcactgtccggatgcgcgtggcatgggtgtccgagtcagcgtggaatccgcACATTGGCGACACCa > 1:4095208‑M1/137‑151 (MQ=255) gCTATCGAGAAAGCCCAGCGCAAGGTCGAAGGCCGCAACTTCGACATTCGTAAGCAATTGCTCGAATATGACGACGTCGCCAACGAGCAGCGCAAGGTGATCTACCACATGCGCAACAGCCTGCTGGCCGCCGAGAACATTGGCGACACCa > 2:1940526/1‑151 (MQ=255) tATCGAGAAAGCCCAGCGCAAGGTCGAAGGCCGCAACTTCGACATTCGTAAGCAATTGCTCGAATATGACGACGTCGCCAACGAGCAGCGCAAGGTGATCTACCACATGCGCAACAGCCTGCTGGCCGCCGAGAACATTGGCGACACCAtc < 1:1570284/151‑1 (MQ=255) tATCGAGAAAGCCCAGCGCAAGGTCGAAGGCCGCAACTTCGACATTCGTAAGCAATTGCTCGAATATGACGACGTCGCCAACGAGCAGCGCAAGGTGATCTACCACATGCGCAACAGCCTGCTGGCCGCCGAGAACATTGGCGACACCAtc < 1:2553330/151‑1 (MQ=255) aTCGAGAAAGCCCAGCGCAAGGTCGAAGGCCGCAACTTCGACATTCGTAAGCAATTGCTCGAATATGACGACGTCGCCAACGAGCAGCGCAAGGTGATCTACCACATGCGCAACAGCCTGCTGGCCGCCGAGAACATTGGCGACACCAtcg > 1:326161/1‑151 (MQ=255) gagaAAGCCCAGCGCAAGGTCGAAGGCCGCAACTTCGACATTCGTAAGCAATTGCTCGAATATGACGACGTCGCCAACGAGCAGCGCAAGGTGATCTACCACATGCGCAACAGCCTGCTGGCCGCCGAGAACATTGGCGACACCAtcgtcg < 2:5278406/151‑1 (MQ=255) gCCCAGCGCAAGGTCGAAGGCGGCAACTTCGACATTCGTAAGCAATTGGTCGAATATGACGACGTCGCCAACGAGCAGCGCAAGGTGATCTACCACAGGCGCAACAGCCTGCTGGCCGCCGAGAACATTGGCGACACCATCGTCGAATTcc < 2:3866691/151‑1 (MQ=255) gCCCAGCGCAAGGTCGAAGGCCGCAACTTCGACATTCGTAAGCAATTGCTCGAATATGACGACGTCGCCAACGAGCAGCGCAAGGTGATCTACCACATGCGCAACAGCCTGCTGGCCGCCGAGAACATTGGCGACACCATCGTCGAATTcc > 2:858394/1‑151 (MQ=255) cccAGCGCAAGGTCGAAGGCCGCAACTTCGACATTCGTAAGCAATTGCTCGAATATGACGACGTCGCCAACGAGCAGCGCAAGGTGATCTACCACATGCGCAACAGCCTGCTGGCCGCCGAGAACATTGGCGACACCATCGTCGAATTCCg < 2:2681605/151‑1 (MQ=255) cccAGCGCAAGGTCGAAGGCCGCAACTTCGACATTCGTAAGCAATTGCTCGAATATGACGACGTCGCCAACGAGCAGCGCAAGGTGATCTACCACATGCGCAACAGCCTGCTGGCCGCCGAGAACATTGGCGACACCATCGTCGAATTCCg > 2:2418318/1‑151 (MQ=255) cccAGCACAAGGTCGAAGGCCGCAACTTCGACATTCGTAAGCAATTGCTCGAATATGACGACGTCGCCAACGAGCAGCGCAAGGTGATCTACCACATGCGCAACAGCCTGCTGGCCGCCGAGAACATTGGCGACACCATCGTCGAATTCCg < 2:1608940/151‑1 (MQ=255) agaaaagtgtccggatgaccgtggagtcggtgtccggatgctcgtggaatgagtgtccggatcagcgtggaatcactgtccggatgcgcgtggaatgggtgtccgagtcagcgtggaatccgcACATTGGCGACACCATCGTCGAATTCCg < 1:435477‑M1/28‑1 (MQ=255) cgcAAGGTCGAAGGCCGCAACTTCGACATTCGTAAGCAATTGCTCGAATATGACGACGTCGCCAACGAGCAGCGCAAGGTGATCTACCACATGCGCAACAGCCTGCGGGCCGCCGAGAACATTTGCGACACCATCGTCGAATTCCGCCAgg > 1:3323063/1‑151 (MQ=255) agtgtccggatgaccgtggagtcggtgtccggatgctcgtggaatgagtgtccggatcagcgtggaatcactgtccggatgcgcgtggaatgggtgtccgagtcagcgtggaatccgcACATTGGCGACACCATCGTCGAATTCCGCAAgg < 1:2396524‑M1/33‑1 (MQ=255) gtgtccggatgaccgtggagtcggtgtccggatgctcgtggaatgagtgtccggatcagcgtggaatcactgtccggatgcgcgtggaatgggtgtccgagtcagcgtggaatccgcACATTGGCGACACCATCGTCGAATTCCGCAAGGa > 2:4565164‑M1/118‑151 (MQ=255) gtgtccggatgaccgtggagtcggtgtccggatgctcgtggaatgagtgtccggatcagcgtggaatcactgtccggatgcgcgtggaatgggtgtccgagtcagcgtggaatccgcACATTGGCGACACCATCGTCGAATTCCGCAAGGa > 2:697641‑M1/118‑151 (MQ=255) gtccggatgaccgtggagtcggtgtccggatgctcgtggaatgagtgtccggatcagcgtggaatcactgtccggatgcgcgtggaatgggtgtccgagtcagcgtggaatccgcACATTGGCGACACCATCGTCGAATTCCGCAAGGAAg < 2:640317‑M1/36‑1 (MQ=255) ggTCGAAGGCCGCAACTTCGACATTCGTAAGCAATTGCTCGAATATGACGACGTCGCCAACGAGCAGCGCAAGGTGATCTACCACATGCGCAACAGCCTGCTGGCCGCCGAGAACATTGGCGACACCATCGTCGAATTCCGCAAGGAAGTa > 1:3751544/1‑151 (MQ=255) ggCCGCAACTTCGACATTCGTAAGCAATTGCTCGAATATGACGACGTCGCCAACGAGCAGCGCAAGGTGATCTACCACATGCGCAACAGCCTGCTGGCCGCCGAGAACATTGGCGACACCATCGTCGAATTCCGCAAGGAAGTACTGGACg > 2:4747938/1‑151 (MQ=255) ggCCGCAACTTCGACATTCGTAAGCAATTGCTCGAATATGACGACGTCGCCAACGAGCAGCGCAAGGTGATCTACCACATGCGCAACAGCCTGCTGGCCGCCGAGAACATTGGCGACACCATCGTCGAATTCCGCAAGGAAGTACTGGACg > 1:1464156/1‑151 (MQ=255) accgtggagtcggtgtccggatgctcgtggaatgagtgtccggatcagcgtggaatcactgtccggatgcgcgtggaatgggtgtccgagtcagcgtggaatccgcACATTGGCGACACCATCGTCGAATTCCGCAAGGAAGTACTGGACg < 1:1641278‑M1/45‑1 (MQ=255) ccGCAACTTCGACATTCGTAAGCAATTGCTCGAATATGACGACGTCGCCAACGAGCAGCGCAAGGTGATCTACCACATGCGCAACAGCCTGCTGGCCGCCGAGAACATTGGCGACACCATCGTCGAATTCCGCAAGGAAGTACTGGACGCt < 2:1180954/151‑1 (MQ=255) tggagtcggtgtccggatgctcgtggaatgagtgtccggatcagcgtggaatcactgtccggctgcgcgtggaatgggtgtccgagccagcgtggaatccgcACATTCGCGACACCATCGTCGAATTCCGCAAGGAAGGACTGGACGCTAc < 2:3424754‑M1/49‑1 (MQ=255) tggagtcggtgtccggatgctcgtggaatgagtgtccggatcagcgtggaatcactgtccggatgcgcgtggaatgggtgtccgagtcagcgtggaatccgcACATTGGCGACACCATCGTCGAATTCCGCAAGGAAGTACTGGACGCTAc < 1:3518598‑M1/49‑1 (MQ=255) gCAACTTCGACATTCGTAAGCAATTGCTCGAATATGACGACGTCGCCAACGAGCAGCGCAAGGTGATCTACCACATGCGCAACAGCCTCCTGGCCGCCGAGAACATTGGCGACACCATCGTCGAATTCCGCAAGGAAGTACTGGACGCTAc > 1:662094/1‑151 (MQ=255) ggagtcggtgtccggatgctcgtggaatgagtgtccggatcagcgtggaatcactgtccggatgcgcgtggaatgggtgtccgagtcagcgtggaatccgcACATTGGCGACACCATCGTCGAATTCCGCAAGGAAGTACTGGACGCTAcc < 2:5092251‑M1/50‑1 (MQ=255) ggtggccggaggctcgtggaatgagtgtccggatcagcgtggaatcactgtccggatgcgcgtggaatgggtgtccgagtcagcgtggaatccgcACATTGGCGACACCATCGTCGAATTCCGCAAGGAAGTACTGGACGCTACCATcagc > 2:5360629‑M1/96‑151 (MQ=255) gtgtccggatgctcgtggaatgagtgtccggatcagcgtggaatcactgtccggatgcgcgtggaatgggtgtccgagtcagcgtggaatccgcACATTGGCGACACCATCGTCGAATTCCGCAAGGAAGTACTGGACGCTACCATcagcc < 1:1979893‑M1/57‑1 (MQ=255) gACATTCGTAAGCAATTGCTCGAATATGACGACGTCGCCAACGAGCAGCGCAAGGTGATCTACCACATGCGCAACAGCCTGCTGGCCGCCGAGAACATTGGCGACACCATCGTCGAATTCCGCAAGGAAGTACTGGACGCTACCATcagcc < 2:2170747/151‑1 (MQ=255) ggatgctcgtggaatgagtgtccggatcagcgtggaatcactgtccggatgcgcgtggaatgggtgtccgagtcagcgtggaatccgcACATTGGCGACACCATCGTCGAATTCCGCAAGGAAGTACTGGACGCTACCATCAGCCAGcaca > 2:2243244‑M1/89‑151 (MQ=255) cGTAAGCAATTGCGCGAATATGACGACGTCGCCAACGAGCAGCGCAAGGTGATCTACCACATGCGCAACAGCCTGCTGGCCGCCGAGAACATTGGCGACACCATCGTCGAATTCCGCAAGGAAGTACTGGACGCTACCATCAGCCAGcaca < 2:3520511/151‑1 (MQ=255) gatgctcgtggaatgagtgtccggatcagcgtggaatcactgtccggatgcgcgtggaatgggtgtccgagtcagcgtggaatccgcACATTGGCGACACCATCGTCGAATTCCGCAAGGAAGTACTGGACGCTACCATCAGCCAGCACAt < 1:955021‑M1/64‑1 (MQ=255) tgctcgtggaatgagtgtccggatcagcgtggaatcactgtccggatgcgcgtggaatgggtgtccgagtcagcgtggaatccgcACATTGGCGACACCATCGTCGAATTCCGCAAGGAAGTACTGGACGCTACCATCAGCCAGCACATTc > 1:113293‑M1/86‑151 (MQ=255) ggcgcgtggaacgagtggccggagcaggctgcaatccctgtccggatgcgcgtggaatgggtgaccgagtcagcgtggaatccgcACATTGGCGTCAGCATGGTCGAATTCCGCAAGGAAGTACTGGACGCTACCAGCAGCAAGCACATTc > 2:3043866‑M1/86‑151 (MQ=255) tggaatgagtgtccggatcagcgtggaatcactgtccggatgcgcgtggaatgggtgtccgagtcagcgtggaatccgcACATTGGCGACACCATCGTCGAATTCCGCAAGGAAGTACTGGACGCTACCATCAGCCAGCACATTCcgccgc < 1:1000824‑M1/72‑1 (MQ=255) aatgagtgtccggatcagcgtggaatcactgtccggatgcgcgtggaatgggtgtccgagtcagcgtggaatccgcACATTGGCGACACCATCGTCGAATTCCGCAAGGAAGTACTGGACGCTACCATCAGCCAGCACATTCCGCCGCAGt < 2:4224305‑M1/75‑1 (MQ=255) gAATATGGCGACGTCGCCAACGAGCAGCGCAAGGTGATCTACCACATGCGCAACAGCCTGCTGGCCGCCGAGAACATTGGCGACACCATCGTCGAATTCCGCAAGGAAGTACTGGACGCTACCATCAGCCAGCACATTCCGCCGCAGTCGc < 2:3342745/151‑1 (MQ=255) gtgtccggatcagcgtggaatcactgtccggatgcgcgtggaatgggtgtccgagtcagcgtggaatccgcACATTGGCGACACCATCGTCGAATTCCGCAAGGAAGTACTGGACGCTACCATCAGCCAGCACATTCCGCCGCAGTCGCTg > 1:4479506‑M1/72‑151 (MQ=255) tatGACGACGTCGCCAACGAGCAGCGCAAGGTGATCTACCACATGCGCAACAGCCTGCTGGCCGCCGAGAACATTGGCGACACCATCGTCGAATTCCGCAAGGAAGTACTGGACGCTACCATCAGCCAGCACATTCCGCCGCAGTCGCTGc > 1:756444/1‑151 (MQ=255) gtccgtagcagcgtggaatcactggccggatgcgcgtggaatgggtggccgagtcagcgtggaatccgcACATTGGCGACACCATCGTCGAATTCCGCAAGGAAGTACTGGACGCTACCATCAGCCAGCACATTCCGCCGCAGTCGCTGcc > 1:5097669‑M1/70‑151 (MQ=255) gtccggatcagcgtggaatcactgtccggatgcgcgtggaatgggtgtccgagtcagcgtggaatccgcACATTGGCGACACCATCGTCGAATTCCGCAAGGAAGTACTGGACGCTACCATCAGCCAGCACATTCCGCCGCAGTCGCTGcc > 2:4354004‑M1/70‑151 (MQ=255) atGACGACGTCGCCAACGAGCAGCGCAAGGTGATCTACCACATGCGCAACAGCCTGCTGGCCGCCGAGAACATTGGCGACACCATCGTCGAATTCCGCAAGGAAGTACTGGACGCTACCATCAGCCAGCACATTCCGCCGCAGTCGCTGcc < 2:3231951/151‑1 (MQ=255) tccggatcagcgtggaatcactgtccggatgcgcgtggaatgggtgtccgagtcagcgtggaatccgcACATTGGCGACACCATCGTCGAATTCCGCAAGGAAGTACTGGACGCTACCATCAGCCAGCACATTCCGCCGCAGTCGCTGCCa < 1:4215143‑M1/83‑1 (MQ=255) tGACGACGTCGCCAACGAGCAGCGCAAGGTGATCTACCACATGCGCAACAGCCTGCTGGCCGCCGAGAACATTGGCGACACCATCGTCGAATTCCGCAAGGAAGTACTGGACGCGACCATCAGCCACCACACTCCGCCCCAGTcccagcgc > 1:273502/1‑144 (MQ=255) ggatcagcgtggaatcactgtccggatgcgcgtggaatgggtgtccgagtcagcgtggaatccgcACATTGGCGACACCATCGTCGAATTCCGCAAGGAAGTACTGGACGCTACCATCAGCCAGCACATTCCGCCGCAGTCGCTGCCagag > 1:3873516‑M1/66‑151 (MQ=255) gatcagcgtggaatcactgtccggatgcgcgtggaatgggtgtccgagtcagcgtggaatccgcACATTGGCGACACCATCGTCGAATTCCGCAAGGAAGTACTGGACGCTACCATCAGCCAGCACATTCCGCCGCAGTCGCTGCCAGAGc < 1:1257294‑M1/87‑1 (MQ=255) gTCGCCAACGAGCAGCGCAAGGTGATCTACCACATGCGCAACAGCCTGCTGGCCGCCGAGAACATTGGCGACACCATCGTCGAATTCCGCAAGGAAGTACTGGACGCTACCATCAGCCAGCACATTCCGCCGCAGTCGCTGCCAGAGCAGt > 2:4090537/1‑151 (MQ=255) cagcgtggaatcactgtccggatgcgcgtggaatgggtgtccgagtcagcgtggaatccgcACATTGGCGACACCATCGTCGAATTCCGCAAGGAAGTACTGGACGCTACCATCAGCCAGCACATTCCGCCGCAGTCGCTGCCAGAGCAGt > 1:5244100‑M1/62‑151 (MQ=255) agcgtggaatcactgtccggatgcgcgtggaatgggtgtccgagtcagcgtggaatccgcACATTGGCGACACCATCGTCGAATTCCGCAAGGAAGTACTGGACGCTACCATCAGCCAGCACATTCCGCCGCAGTCGCTGCCAGAGCAGTg < 1:4540626‑M1/91‑1 (MQ=255) cgtggaatcactgtccggatgcgcgtggaatgggtgtccgagtcagcgtggaatccgcACATTGGCGACACCATCGTCGAATTCCGCAAGGAAGTACTgg > 1:4888206‑M1/59‑100 (MQ=255) tggaatcactgtccggatgcgcgtggaatgggtgtccgagtcagcgtggaatccgcACATTGGCGACACCATCGTCGAATTCCGCAAGGAAGTACTGGACGCTACCATCAGCCAGCACATTCCGCCGCAGTCGCTGCCAGAGCAGTGGGAc > 2:1518475‑M1/57‑151 (MQ=255) aatcactgtccggatgcgcgtggaatgggtgtccgagtcagcgtggaatccgcACATTGGCGACACCATCGTCGAATTCCGCAAGGAAGTACTGGACGCTACCATCAGCCAGCACATTCCGCCGCAGTCGCTGCCAGAGCAGTGGGACGTa > 1:1098403‑M1/54‑151 (MQ=255) tcactgtccggatgcgcgtggaatgggtgtccgagtcagcgtggaatccgcACATTGGCGACACCATCGTCGAATTCCGCAAGGAAGTACTGGACGCTACCATCAGCCAGCACATTCCGCCGCAGTCGCTGCCAGAGCAGTGGGACGTAGc > 2:1248204‑M1/52‑151 (MQ=255) actgtccggatgcgcgtggaatgggtgtccgagtcagcgtggaatccgcACATTGGCGACACCATCGTCGAATTCCGCAAGGAAGTACTGGACGCTACCATCAGCCAGCACATTCCGCCGCAGTCGCTGCCAGAGCAGTGGGACGTAGCCg > 1:2884216‑M1/50‑151 (MQ=255) actgtccggatgcgcgtggaatgggtgtccgagtcagcgtggaatccgcACATTGGCGACACCATCGTCGAATTCCGCAAGGAAGTACTGGACGCTACCATCAGCCAGCACATTCCGCCGCAGTCGCTGCCAGAGCAGTGGGACGTAGCCg > 2:398660‑M1/50‑151 (MQ=255) actgtccggaggcgcggggaatgggtgtccgagtcagcgtggaatccgcACATTGGCGACACCATCGTCGAATTCCGCAAGGAAGTACTGGACGCTACCATCAGCCAGCACATTCCGCCGCAGTCGCTGCCAGAGCAGTGGGACGTAGCCg > 2:4804328‑M1/50‑151 (MQ=255) ctgtccggatgcgcgtggaatgggtgtccgagtcagcgtggaatccgcACATTGGCGACACCATCGTCGAATTCCGCAAGGAAGTACTGGACGCTACCATCAGCCAGCACATTCCGCCGCAGTCGCTGCCAGAGCAGTGGGACGTAGCCgg > 2:1135423‑M1/49‑151 (MQ=255) gcgcAAGGTGATCTACCACATGCGCAACAGCCTGCTGGCCGCCGAGAACATTGGCGACACCATCGTCGAATTCCGCAAGGAAGTACTGGACGCTACCATCAGCCAGCACATTCCGCCGCAGTCGCTGCCAGAGCAGTGGGACGTAGCCGGc < 1:1720602/151‑1 (MQ=255) cggatgcgcgtggaatgggtgtccgagtcagcgtggaatccgcACATTGGCGACACCATCGTCGAATTCCGCAAGGAAGTACTGGACGCTACCATCAGCCAGCACATTCCGCCGCAGTCGCTGCCAGAGCAGTGGGACGTAGCCGGCCTgg < 2:3765819‑M1/108‑1 (MQ=255) aaGGTGATCTACCACATGCGCAACAGCCTGCTGGCCGCCGAGAACATTGGCGACACCATCGTCGAATTCCGCAAGGAAGTACTGGACGCTACCATCAGCCAGCACATTCCGCCGCAGTCGCTGCCAGAGCAGTGGGACGTAGCCGGCCTgg > 2:2795560/1‑151 (MQ=255) atgcgcgtggaatgggtgtccgagtcagcgtggaatccgcACATTGGCGACACCATCGTCGAATTCCGCAAGGAAGTACTGGACGCTACCATCAGCCAGCACATTCCGCCGCAGTCGCTGCCAGAGCAGTGGGACGTAGCCGGCCTGGAgg > 1:188833‑M1/41‑151 (MQ=255) atgcgcgtggaatgggtgtccgagtcagcgtggaatccgcACATTAGCGACACCATCGTCGAATTCAGCAACGAAGTACTGGACTCTACTATCAGCCAGCACATTCCGCCGCAGTCGCTGCCAGAGCAGTAGGACGTAGCCAGCCTGGAgg < 2:3136434‑M1/111‑1 (MQ=255) gcgcgtggaatgggtgtccgagtcagcgtggaatccgcACATTGGCGACACCATCGTCGAATTCCGCAAGGAAGTACTGGACGCTACCATCAGCCAGCACATTCCGCCGCAGTCGCTGCCAGCGCAGTGGGACGTAGCCGGCCTGGAGGCt < 2:4890120‑M1/113‑1 (MQ=255) gcgcgtggaatgggtgtccgagtcagcgtggaatccgcACATTGGCGACACCATCGTCGAATTCCGCAAGGAAGTACTGGACGCTACCATCAGCCAGCACATTCCGCCGCAGTCGCTGCCAGAGCAGTGGGACGTAGCCGGCCTGGAGGCt > 2:2598467‑M1/39‑151 (MQ=255) gATCTACCACATGCGCAACAGCCTGCTGGCCGCCGAGAACATTGGCGACACCATCGTCGAATTCCGCAAGGAAGTACTGGACGCTACCATCAGCCAGCACATTCCGCCGCAGTCGCTGCCAGAGCAGTGGGACGTAGCCGGCCTGGAGGCt > 1:3653039/1‑151 (MQ=255) aTCTGCCACATGCGCAACAGCCTGCTGGCCGCCGAGAACATTGGCGACACCATCGTCGAATTCCGCAAGGAAGTACTGGACGCTACCATCAGCCAGCACATTCCGCCGCAGTCGCTGCCAGAGCAGTGGGACGTAGCCGGCCTGGAGGCtt < 2:2107537/151‑1 (MQ=255) gcgtggaatgggtgtccgagtcagcgtggaatccgcACATTGGCGACACCATCGTCGAATTCCGCAAGGAAGTACTGGACGCTACCATCAGCCAGCACATTCCGCCGCAGTCGCTGCCAGAGCAGTGGGACGTAGCCGGCCTGGAGGCTTc > 2:5036744‑M1/37‑151 (MQ=255) cTACCACATGCGCAACAGCCTGCTGGCCGCCGAGAACATTGGCGACACCATCGTCGAATTCCGCAAGGAAGTACTGGACGCTACCATCAGCCAGCACATTCCGCCGCAGTCGCTGCCAGAGCAGTGGGACGTAGCCGGCCTGGAGGCTTCg > 1:3979521/1‑151 (MQ=255) gtggaatgggtgtccgagtcagcgtggaatccgcACATTGGCGACACCATCGTCGAATTCCGCAAGGAAGTACTGGACGCTACCATCAGCCAGCACATTCCGCCGCAGTCGCTGCCAGAGCAGTGGGACGTAGCCGGCCTGGAGGCTTCGc < 1:1795333‑M1/117‑1 (MQ=255) aatgggtgtccgagtcagcgtggaatccgcACATTGGCGACACCATCGTCGAATTCCGCAAGGAAGTACTGGACGCTACCATCAGCCAGCACATTCCGCCGCAGTCGCTGCCAGAGCAGTGGGACGTAGCCGGCCTGGAGGCTTCGCTGGc > 2:1394570‑M1/31‑151 (MQ=255) caTGCGCAACAGCCTGCTGGCCGCCGAGAACATTGGCGACACCATCGTCGAATTCCGCAAGGAAGTACTGGACGCTACCATCAGCCAGCACATTCCGCCGCAGTCGCTGCCAGAGCAGTGGGACGTAGCCGGCCTGGAGGCTTCGCTGGcc < 1:248370/151‑1 (MQ=255) atgggtgtccgagtcagcgtggaatccgcACATTGGCGACACCATCGTCGAATTCCGCAAGGAAGTACTGGACGCTACCATCAGCCAGCACATTCCGCCGCAGTCGCTGCCAGAGCAGTGGGACGTAGCCGGCCTGGAGGCTTCGCTGGcc < 1:2197685‑M1/122‑1 (MQ=255) atgggtggcggagtcagcgtggaatccgcACATTGGCGACACCATCGTCGAATTCCGCAAGGAAGTACTGGACGCTACCATCAGCCAGCACATTCCGCCGCAGTCGCTGCCAGAGCAGTGGGACGTAGCCGGCCTGGAGGCTTCGCTGGcc > 2:10252‑M1/30‑151 (MQ=255) aTGCGCAACAGCCTGCTGGCCGCCGAGAACATTGGCGACACCATCGTCGAATTCCGCAAGGAAGTACTGGACGCTACCATCAGCCAGCACATTCCGCCGCAGTCGCTGCCAGAGCAGTGGGACGTAGCCGGCCTGGAGGCTTCGCTGGCCa > 1:1385518/1‑151 (MQ=255) cAACAGCCTGCTGGCCGCCGAGAACATTGGCGACACCATCGTCGAATTCCGCAAGGAAGTACTGGACGCTACCATCAGCCAGCACATTCCGCCGCAGTCGCTGCCAGAGCAGTGGGACGTAGCCGGCCTGGAGGCTTCGCTGGCCAGCGAt < 1:821134/151‑1 (MQ=255) cAACAGCCTGCTGGCCGCCGAGAACATTGGCGACACCATCGTCGAATTCCGCAAGGAAGTACTGGACGCTACCATCAGCCAGCACATTCCGCCGCAGTCGCTGCCAGAGCAGTGGGACGTAGCCGGCCTGGAGGCTTCGCTGGCCAGCGAt > 1:2583917/1‑151 (MQ=255) ccgagtcagcgtggaatccgcACATTGGCGACACCATCGTCGAATTCCGCAAGGAAGTACTGGACGCTACCATCAGCCAGCACATTCCGCCGCAGTCGCTGCCAGAGCAGTGGGACGTAGCCGGCCTGGAGGCTTCGCTGGCCAGCGAttt < 2:1711894‑M1/130‑1 (MQ=255) gagtcagcgtggaatccgcACATTGGCGACACCATCGTCGAATTCCGCAAGGAAGTACTGGACGCTACCATCAGCCAGCACATTCCGCCGCAGTCGCTGCCAGAGCAGTGGGACGTAGCCGGCCTGGAGGCTTCGCTGGCCAGCGATTTCg < 1:3408662‑M1/132‑1 (MQ=255) atccTGCTGGCCGCCGAGAACATTGGCGACACCATCGTCGAATTCCGCAAGGAAGTACTGGACGCTACCATCAGCCAGCACATTCCGCCGCAGTCGCTGCCAGAGCAGTGGGACGTAGCCGGCCTGGAGGCTTCGCTGGCCAGCGATTTCg < 1:3076085/149‑1 (MQ=255) ctgctgGCCGCCGAGAACATTGGCGACACCATCGTCGAATTCCGCAAGGAAGTACTGGACGCTACCATCAGCCAGCACATTCCGCCGCAGTCGCTGCCAGAGCAGTGGGACGTAGCCGGCCTGGAGGCTTCGCTGGCCAGCGATTTCGCCa > 2:2070225/1‑151 (MQ=255) cagcgtggaatccgcACATTGGCGACACCATCGTCGAATTCCGCAAGGAAGTACTGGACGCTACCATCAGCCAGCACATTCCGCCGCAGTCGCTGCCAGAGCAGTGGGACGTAGCCGGCCTGGAGGCTTCGCTGGCCAGCGATTTCGCCAt < 1:4992736‑M1/136‑1 (MQ=255) gctgGCCGCCGAGAACATTGGCGACACCATCGTCGAATTCCGCAAGGAAGTACTGGACGCTACCATCAGCCAGCACATTCCGCCGCAGTCGCTGCCAGAGCAGTGGGACGTAGCCGGCCTGGAGGCTTCGCTGGCCAGCGATTTCGCCATc > 2:4174523/1‑151 (MQ=255) agcgtggaatccgcACATTGGCGACACCATCGTCGAATTCCGCAAGGAAGTACTGGACGCTACCATCAGCCAGCACATTCCGCCGCAGTCGCTGCCAGAGCAGTGGGACGTAGCCGGCCTGGAGGCTTCGCTGGCCAGCGATTTCGCCATc < 2:5409047‑M1/137‑1 (MQ=255) cgtggaatccgcACATTGGCGACACCATCGTCGAATTCCGCAAGGAAGTACTGGACGCTACCATCAGCCAGCACATTCCGCCGCAGTCGCTGCCAGAGCAGTGGGACGTAGCCGGCCTGGAGGCTTCGCTGGCCAGCGATTTCGCCATCaa > 1:3205290‑M1/13‑151 (MQ=255) gaatccgcACATTGGCGACACCATCGTCGAATTCCGCAAGGAAGTACTGGACGCTACCATCAGCCAGCACATTCCGCCGCAGTCGCTGCCAGAGCAGTGGGACGTAGCCGGCCTGGAGGCTTCGCTGGCCAGCGATTTCGCCATCAAGTTg > 2:2958747‑M1/9‑151 (MQ=255) atccgcACATTGGCGACACCATCGTCGAATTCCGCAAGGAAGTACTGGACGCTACCATCAGCCAGCACATTCCGCCGCAGTCGCTGCCAGAGCAGTGGGACGTAGCCGGCCTGGAGGCTTCGCTGGCCAGCGATTTCGCCATCAAGTTGcc < 1:2117943‑M1/145‑1 (MQ=255) tccgcACATTGGCGACACCATCGTCGAATTCCGCAAGGAAGTACTGGACGCTACCATCAGCCAGCACATTCCGCCGCAGTCGCTGCCAGAGCAGTGGGACGTAGCCGGCCTGGAGGCTTCGCTGGCCAGCGATTTCGCCATCAAGTTGCCg > 2:4629822‑M1/6‑151 (MQ=255) agaACATTGGCGACACCATCGTCGAATTCCGCAAGGAAGTACTGGACGCTACCATCAGCCAGCACATTCCGCCGCAGTCGCTGCCAGAGCAGTGGGACGTAGCCGGCCTGGAGGCTTCGCTGGCCAGCGATTTCGCCATCAAGTTGCCGAt > 1:5375932/1‑151 (MQ=255) | GCATGGTCACCAACGCTATCGAGAAAGCCCAGCGCAAGGTCGAAGGCCGCAACTTCGACATTCGTAAGCAATTGCTCGAATATGACGACGTCGCCAACGAGCAGCGCAAGGTGATCTACCACATGCGCAACAGCCTGCTGGCCGCCGAGAACATTGGCGACACCATCGTCGAATTCCGCAAGGAAGTACTGGACGCTACCATCAGCCAGCACATTCCGCCGCAGTCGCTGCCAGAGCAGTGGGACGTAGCCGGCCTGGAGGCTTCGCTGGCCAGCGATTTCGCCATCAAGTTGCCGATTCA > CP009974/3237292‑3237592 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |