New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009974 1155977 =3 (0.010)314 (1.560)
+GGCTTCGCCTCGACCGCTGAGCTGGCTGCCGGCAGCGCC		 122/222 0.3 74.4% coding (64/564 nt) RPPX_05120 hypothetical protein
?CP009974 = 1158685 290 (1.060)intergenic (+2208/‑13075) RPPX_05120/RPPX_05130 hypothetical protein/channel protein TolC

Only 100 of 770 total aligned reads displayed.

CACCCTCGACCCGCCACAGGTAGACGGCGAAGTGCTGCAAGTGACGGCCACCGATGCGGCAGGCAACGCCTCCACCGCCAATAACCTTACCGCGCCGGACATCGACGGCGGCGACACAACGCCACCGGAGGCCCCGACCAATCTGGTGATCAACCCTGCCGGCAGCCAGCTGACCGGTCGCGGTGAAGCCGGTGCCGGCCTTCAGGTGCGCGATGGCGCAGGCACCGTAGTTGCCACGGGCACGGTCAATCCGGATGGCACCTTCGCCATCACGTTGAACCCGGCCATCACCGATGGCAGT  >  CP009974/1158535‑1158835
                                                                                                                                                      |                                                                                                                                                      
cACCCTCGACCCGCCACAGGTAGACGGCGAAGTGCTGCAAGTGACGGCCACCGATGCGGCAGGCAACGCCTCCACCGCCCATAACCTTACCGCGCCGGCCATAGACGGCGGCGACACAACGCCCCCGCAGGCCCCGCCCAATCTGGTGATc                                                                                                                                                        >  1:22478/1‑151 (MQ=38)
cACCCTCGACCCGCCACAGGTAGACGGCGAAGTGCTGCAAGTGACGGCCACCGATGCGGCAGGCAACGCCTCCACCGCCAATAACCTTACCGCGCCGGACATCGACGGCGGCGACACAACGCCACCGGAGGCCCCGACCAATCTGGTGATc                                                                                                                                                        <  1:1150728/151‑1 (MQ=255)
cACCCTCGACCCGCCACAGGTAGACGGCGAAGTGCTGCAAGTGACGGCCACCGATGCGGCAGGCAACGCCTCCACCGCCAATAACCTTACCGCGCCGGACATCGACGGCGGCGACACAACGCCACCGGAGGCCCCGACCAATCTGGTGATc                                                                                                                                                        >  1:1260066/1‑151 (MQ=255)
cACCCTCGACCCGCCACAGGTAGACGGCGAAGTGCTGCAAGTGACGGCCACCGATGCGGCAGGCAACGCCTCCACCGCCAATAACCTTACCGCGCCGGACATCGACGGCGGCGACACAACGCCACCGGAGGCCCCGACCAATCTGGTGATc                                                                                                                                                        >  1:5228859/1‑151 (MQ=255)
 aCCCTCGACCCGCCACAGGTAGACGGCGAAGTGCTGCAAGTGACGGCCACCGATGCGGCAGGCAACGCCTCCACCGCCAATAACCTTACCGCGCCGGACATCGACGGCGGCGACACAACGCCACCGGAGGCCCCGACCAATCTGGTGATCg                                                                                                                                                       >  2:4472426‑M2/1‑150 (MQ=255)
  cccTCGACCCGCCACAGGTAGACGGCGAAGTGCTGCAAGTGACGGCCACCGATGCGGCAGGCAACGCCTCCACCGCCAATAACCTTACCGCGCCGGACATCGACGGCGGCGACACAACGCCACCGGAGGCCCCGACCAATCTGGTGATCaa                                                                                                                                                      <  2:4638202/151‑1 (MQ=255)
     tCGACCCGCCACAGGTAGACGGCGAAGTGCTGCAAGTGACGGCCACCGATGCGGCAGGCAACGCCTCCACCGCCAATAACCTTACCGCGCCGGACATCGACGGCGGCGACACAACGCCACCGGAGGCCCCGACCAATCTGGTGATCAAccc                                                                                                                                                   <  1:2628068/151‑1 (MQ=255)
         cccGCCACAGGTAGACGGCGAAGTGCTGCAAGTGACGGCCACCGATGCGGCAGGCAACGCCTCCACCGCCAATAACCTTACCGCGCCGGACATCGACGGCGGCGACACAACGCCACCGGAGGCCCCGACCAATCTGGTGATCggcgctgcc                                                                                                                                               <  1:2726604‑M2/151‑10 (MQ=255)
         cccGCCACAGGTAGACGGCGAAGTGCTGCAAGTGACGGCCACCGATGCGGCAGGCAACGCCTCCACCGCCAATAACCTTACCGCGCCGGACATCGACGGCGGCGACACAACGCCACCGGAGGCCCCGACCAATCTGGTGATCAACCCTGcc                                                                                                                                               >  1:5001572/1‑151 (MQ=255)
           cGCCACAGGTAGACGGCGAAGTGCTGCAAGTGACGGCCACCGATGCGGCAGGCAACGCCTCCACCGCCAATAACCTTACCGCGCCGGACATCGACGGCGGCGACACAACGCCACCGGAGGCCCCGCCCAATCTGGTGATCggcgctgccgc                                                                                                                                             <  2:797233‑M2/151‑12 (MQ=255)
           cGCAACAGGTAGACGGCGAAGTGCCGCAAGTGACGGCCACCGATGCGGCAGGCAACGCCTCCGCCGCTCATATCCTTACCGCGCCGGACATCGACGGCGGCGACCCAACGCCGCCGGAGGCCCCGACCAATCTGGTGATCAACCCTGCCgg                                                                                                                                             <  2:3568630/151‑1 (MQ=255)
             ccACAGGTAGACGGCGAAGTGCTGCAAGTGACGGCCACCGATGCGGCAGGCAACGCCTCCACCGCCAATAACCTTACCGCGCCGGACATCGACGGCGGCGACACAACGCCACCGGAGGCCCCGACCAATCTGGTGATCggcgctgccggca                                                                                                                                           <  1:1510111‑M2/151‑14 (MQ=255)
              cacaGGTAGACGGCGAAGTGCTGCAAGTGACGGCCACCGATGCGGCAGGCAACGCCTCCACCGCCAATAACCTTACCGCGCCGGACATCGACGGCGGCGACACAACGCCACCGGAGGCCCCGACCAATCTGGTGATCggcgctgccggcag                                                                                                                                          <  2:2279716‑M2/151‑15 (MQ=255)
                 aGGTAGACGGCGAAGTGCTGCAAGTGACGGCCACCGATGCGGCACGCAACGCCTCCACCGCCAATAACCTTACCGCGCCGGACATCGACGGCGGCGACACAACGCCACCGGAGGCCCCGACCAATCTGGTGATCAACCCTGCCGGcagcca                                                                                                                                       >  1:4094796/1‑151 (MQ=255)
                   gTAGACGGCGAAGTGCTGCAAGTGACGGCCACCGATGCGGCAGGCAACGCCTCCACCGCCAATAACCTTACCGCGCCGGACATCGACGGCGGCGACACAACGCCACCGGAGGCCCCGACCAATCTGGTGATCggcgctgccggcagccagc                                                                                                                                     <  1:2298786‑M2/151‑20 (MQ=255)
                    tAGACGGCGAAGTGCTGCACGGGACGGCCACCGATGCGGCAGGCAACGCCTCCACCGCCAATAACCTTACCGCGCCGGACATCGACGGCGGCGACACAACGCCACCGGAGGCCCCGACCAATCTGGTGATCggcgctgccggcagccagct                                                                                                                                    >  1:5080820‑M2/1‑131 (MQ=255)
                    tAGACGGCGAAGTGCTGCAAGTGACGGCCACCGATGCGGCAGGCAACGCCTCCACCGCCAATAACCTTACCGCGCCGGACATCGACGGCGGCGACACAACGCCACCGGAGGCCCCGACCAATCTGGTGATCggcgctgccggcagccagct                                                                                                                                    >  1:3049305‑M2/1‑131 (MQ=255)
                      gACGGCGAAGTGCTGCAAGTGACGGCCACCGATGCGGCAGGCAACGCCTCCACCGCCAATAACCTTACCGCGCCGGACATCGACGGCGGCGACACAACGCCACCGGAGGCCCCGACCAATCTGGTGATCggcgctgccggcagccagctca                                                                                                                                  >  1:3586527‑M2/1‑129 (MQ=255)
                       aCGGCGAAGTGCTGCAAGTGACGGCCACCGATGCGGCAGGCAACGCCTCCACCGCCAATAACCTTACCGCGCCGGACATCGACGGCGGCGACACAACGCCACCGGAGGCCCCGACCAATCTGGTGATCggcgctgccggcagccagctcag                                                                                                                                 >  2:4778811‑M2/1‑128 (MQ=255)
                        cGGCGAAGTGCTGCAAGTGACGGCCACCGATGCGGCAGGCAACGCCTCCACCGCCAATAACCTTACCGCGCCGGACATCGACGGCGGCGACACAACGCCACCGGAGGCCCCGACCAATCTGGTGATCAACCCTGCCGGCAGCCAGCTGAcc                                                                                                                                <  1:2054550/151‑1 (MQ=255)
                        cGGCGAAGTGCTGCAAGTGACGGCCACCGATGCGGCAGGCAACGCCTCCACCGCCAATAACCTTACCGCGCCGGACATCGACGGCGGCGACACAACGCCACCGGAGGCCCCGACCAATCTGGTGATCAACCCTGCCGGCAGCCAGCTGAcc                                                                                                                                <  1:373942/151‑1 (MQ=255)
                           cGAAGTGCTGCAAGTGACGGCCACCGATGCGGCAGGCAACGCCTCCACCGCCAATAACCTTACCGCGCCGGACATCGACGGCGGCGACACAACGCCACCGGAGGCCCCGACCAATCTGGTGATCggcgctgccggcagccagctcagcggt                                                                                                                             <  1:2537615‑M2/151‑28 (MQ=255)
                            gAAGTGCTGCAAGTGACGGCCACCGATGCGGCAGGCAACGCCTCCACCGCCAATAACCTTACCGCGCCGGACATCGACGGCGGCGACACAACGCCACCGGAGGCCCCGACCAATCTGGTGATCggcgctgccggcagccagctcagcggtc                                                                                                                            >  2:1351520‑M2/1‑123 (MQ=255)
                            gAAGTGCTGCAAGTGACGGCCACCGATGCGGCAGGCAACGCCTCCACCGCCAATAACCTTACCGCGCCGGACATCGACGGCGGCGACACAACGCCACCGGAGGCCCCGACCAATCTGGTGATCAACCCTGCCGGCAGCCAGCTGACCGGTc                                                                                                                            >  1:5139570/1‑151 (MQ=255)
                             aaGTGCTGCAAGTGCCGGCCACCGATGCGGCAGGCAACGCCTCCACCGCCAATAACCTTACCGCGCCGGACATCGACGGCGGCGACACAACGCCACCGGAGGCCCCGACCAATCTGGTGATCggcgctgccggcagccagctcagcggtcg                                                                                                                           >  2:4061267‑M2/1‑122 (MQ=255)
                               gTGCTGCAAGTGACGGCCACCGATGCGGCAGGCAACGCCTCCACCGCCAATAACCTTACCGCGCCGGACATCGACGGCGGCGACACAACGCCACCGGAGGCCCCGACCAATCTGGTGATCggcgctgccggcagccagctcagcggtcgag                                                                                                                         >  1:4178846‑M2/1‑120 (MQ=255)
                               gTGCTGCAAGTGACGGCCACCGATGCGGCAGGCAACGCCTCCACCGCCAATAACCTTACCGCGCCGGACATCGACGGCGGCGACACAACGCCACCGGAGGCCCCGACCAATCTGGTGATCAACCCTGCCGGCAGCCAGCTGACCGGTcgcg                                                                                                                         >  2:3354012/1‑151 (MQ=255)
                                   tgcAAGTGACGGCCACCGATGCGGCAGGCAACGCCTCCACCGCCAATAACCTTACCGCGCCGGACATCGACGGCGGCGACACAACGCCACCGGAGGCCCCGACCAATCTGGTGATCAACCCTGCCGGCAGCCAGCTGACCGGTCGCGGTGa                                                                                                                     <  1:2969409/151‑1 (MQ=255)
                                   ggcAAGTGACGGCCACCGATGCGGCAGGCAACGCCTCCACCGCCAATAACCTTACCGCGCCGGACATCGACGGCGGCGACACAACGCCACCGGAGGCCCCGACCAATCTGGTGATCAACCCTGCCGGCAGCCAGCTGACCGGTCGCGGTGa                                                                                                                     <  2:4922928/150‑1 (MQ=255)
                                    gcAAGTGACGGCCACCGATGCGGCAGGCAACGCCTCCACCGCCAATAACCTTACCGCGCCGGACATCGACGGCGGCGACACAACGCCACCGGAGGCCCCGACCAATCTGGTGATCAACCCTGCCGGCAGCCAGCTGACCGGTCGCGGTGaa                                                                                                                    <  1:2857078/151‑1 (MQ=255)
                                      aaGTGACGGCCACCGATGCGGCAGGCAACGCCTCCACCGCCAATAACCTTACCGCGCCGGACATCGACGGCGGCGACACAACGCCACCGGAGGCCCCGACCAATCTGGTGATCggcgctgccggcagccagctcagcggtcgaggcgaagc                                                                                                                  <  1:1360556‑M2/151‑39 (MQ=255)
                                       aGTGACGGCCACCGATGCGGCAGGCAACGCCTCCACCGCCAATAACCTTACCGCGCCGGACATCGACGGCGGCGACACAACGCCACCGGAGGCCCCGACCAATCTGGTGATCggcgctgccggcagccagctcagcggtcgaggcgaagcc                                                                                                                 >  1:4709265‑M2/1‑112 (MQ=255)
                                        gTGACGGCCACCGATGCGGCAGGCAACGCCTCCACCGCCAATAACCTTACCGCGCCGGACATCGACGGCGGCGACACAACGCCACCGGAGGCCCCGACCAATCTGGTGATCggcgctgccggcagccagctcagcggtcgaggcgaagccg                                                                                                                <  2:1977178‑M2/151‑41 (MQ=255)
                                          gACGGCCACCGATGCGGCAGGCAACGCCTCCACCGCCAATAACCTTACCGCGCCGGACATCGACGGCGGCGACACAACGCCACCGGAGGCCCCGACCAATCTGGTGATCggcgctgccggcagccagctcagcggtcgaggcgaagccggc                                                                                                              >  1:2195084‑M2/1‑109 (MQ=255)
                                           ccGGCCACCGATGCGGCAGGCAACGCCTCCACCGCCAATAACCTTACCGCGCCGGACATCGACGGCGGCGACACAACGCCACCGGAGGCCCCGACCAATCTGGTGATCAACCCTGCCGGCAGCCAGCTGACCGGTCGCGGTGAAGCCGGTg                                                                                                             <  2:1244404/150‑1 (MQ=255)
                                            cGGCCACCGATGCGGCAGGCAACGCCTCCACCGCCAATAACCTTACCGCGCCGGACATCGACGGCGGCGACACAACGCCACCGGAGGCCCCGACCAATCTGGTGATCggcgctgccggcagccagctcagcggtcgaggcgaagccggctc                                                                                                            >  2:1451840‑M2/1‑107 (MQ=255)
                                              gCCACCGATGCGGCAGGCAACGCCTCCACCGCCAATAACCTTACCGCGCCGGACATCGACGGCGGCGACACAACGCCACCGGAGGCCCCGACCAATCTGGTGATCAACCCTGCCGGCAGCCAGCTGACCGGTCGCGGTGAAGCCGGTGCCg                                                                                                          <  2:4172865/151‑1 (MQ=255)
                                                    gATGCGGCAGGCAACGCCTCCACCGCCAATAACCTTACCGCGCCGGACATCGACAGCGGCGACACAACGCCACCGGAGGCCCCGACCAATCTGGTGATCggcgctgccggccgccagctcagcggtcgaggcgaagccggctctaccgtgc                                                                                                    <  2:4588589‑M2/151‑53 (MQ=255)
                                                         ggcaggcaACGCCTCCACCGCCAATAACCTTACCGCGCCGGACATCGACGGCGGCGACACAACGCCACCGGAGGCCCCGACCAATCTGGTGATCggcgctgccggcagccagctcagcggtcgaggcgaagccggctctaccgtgcaggtg                                                                                               <  1:3777057‑M2/151‑58 (MQ=255)
                                                             ggcaACGCCTCCACCGCCAATACCCTTACCGCGCCGGACATCGACGGCGGCGACACAACGCCACCGGAGGCCCCGACCAATCTGGTGATCggcgctgccggcagccagctcagcggtcgaggcgaagccggctctaccgtgcaggtgcgtg                                                                                           >  1:2995783‑M2/1‑90 (MQ=255)
                                                             ggcaACGCCTCCACCGCCAATAACCTTACCGCGCCGGACATCGACGGCGGCGACACAACGCCACCGGAGGCCCCGACCAATCTGGTGATCggcgctgccggcagccagctcagcggtcgaggcgaagccggctctaccgtgcaggtgcgtg                                                                                           <  1:3485027‑M2/151‑62 (MQ=255)
                                                             ggcaACGCCTCCACCGCCAATAACCTTACCGCGCCGGACATCGACGGCGGCGACACAACGCCACCGGAGGCCCCGACCAATCTGGTGATCAACCCTGCCGGCAGCCAGCTGACCGGTCGCGGTGAAGCCGGTGCCGGCCTTCAGGTGcgcg                                                                                           <  2:3532545/151‑1 (MQ=255)
                                                                aaCGCCTCCACCGCCAATAACCTTACCGCGCCGGACATCGACGGCGGCGACACAACGCCACCGGAGGCCCCGACCAATCTGGTGATCggcgctgccggcagccagctcagcggtcgaggcgaagccggctctaccgtgcaggtgcgtgacg                                                                                        <  2:5125595‑M2/151‑65 (MQ=255)
                                                                 aCGCCTCCACCGCCAATAACCTTACCGCGCCGGACATCGACGGCGGCGACACAACGCCACCGGAGGCCCCGACCAATCTGGTGATCggcgctgccggcagccagctcagcggtcgaggcgaagccggctctaccgtgcaggtgcgtgacgg                                                                                       <  1:4888757‑M2/151‑66 (MQ=255)
                                                                  cGCCTCCACCGCCAATAACCTTACCGCGCCGGACATCGACGGCGGCGACACAACGCCACCGGAGGCCCCGACCAATCTGGTGATCAACCCTGCCGGCAGCCAGCTGACCGGTCGCGGTGAAGCCGGTGCCGGCCTTCAGGTGCGCGATGgc                                                                                      >  1:2470053/1‑151 (MQ=255)
                                                                   gCCTCCACCGCCAATAACCTTACCGCGCCGGACATCGACGGCGGCGACACAACGCCACCGGAGGCCCCGACCAATCTGGTGATCggcgctgccggcagccagctcagcggtcgaggcgaagccggctctaccgtgcaggtgcgtgacgtgg                                                                                     >  2:155459‑M2/1‑84 (MQ=255)
                                                                    ccTCCACCGCCAATAACCTGACCGCGCCGGACATCGACGGCGGCGACACAACGCCACCGGAGGCCCCGACCAATCTGGTGATCAACCCTGCCGGCAGCCAGCTGACCGGTCGCGGTGAAGCCGGTGCCGGCCTTCAGGTGCGCGATGgcgc                                                                                    <  2:3854996/151‑1 (MQ=255)
                                                                     cTCCACCGCCAATAACCTTACCGCGCCGGACATCGACGGCGGCGACACAACGCCACCGGAGGCCCCGACCAATCTGGTGATCggcgctgccggcagccagctcagcggtcgaggcgaagccggctctaccgtgcaggtgcgtgacgtggca                                                                                   <  1:428185‑M2/151‑70 (MQ=255)
                                                                      tCCACCGCCAATAACCTTACCGCGCCGGACATCGACGGCGGCGACACAACGCCACCGGAGGCCCCGACCAATCTGGTGATCggcgctgccggcagccagctcagcggtcgaggcgaagccggctctaccgtgcaggtgcgtgacgtggcag                                                                                  <  2:2988866‑M2/151‑71 (MQ=255)
                                                                       ccACCGCCAATAACCTTACCGCGCCGGACATCGACGGCGGCGACACAACGCCACCGGAGGCCCCGACCAATCTGGTGATCggcgctgccggcagccagctcagcgttcgaggcgaagccggctctaccgtgcaggtgcgtgacgtggcagg                                                                                 <  2:223079‑M2/151‑72 (MQ=255)
                                                                       ccACCGCCAATAACCTTACCGCGCCGGACATCGACGGCGGCGACACAACGCCACCGGAGGCCCCGACCAATCTGGTGATCggcgctgccggcagccagctcagcggtcgaggcgaagccggctctaccgtgcaggtgcgtgacgtggcagg                                                                                 <  1:4776866‑M2/151‑72 (MQ=255)
                                                                         aCCGCCAATAACCTTACCGCGCCGGACATCGACGGCGGCGACACAACGCCACCGGAGGCCCCGACCAATCTGGTGATCggcgctgccggcagccagctcagcggtcgaggcgaagccggctctaccgtgcaggtgcgtgacgtggcaggca                                                                               <  1:450018‑M2/151‑74 (MQ=255)
                                                                         aCCGCCAATAACCTTACCGCGCCGGACATCGACGGCGGCGACACAACGCCACCGGAGGCCCCGACCAATCTGGTGATCggcgctgccg                                                                                                                                              >  2:1941456‑M2/1‑78 (MQ=255)
                                                                          ccGCCAATAACCTTACCGCGCCGGACATCGACGGCGGCGACACAACGCCACCGGAGGCCCCGACCAATCTGGTGATCggcgctgccggcagccagctcagcggtcgaggcgaagccggctctaccgtgcaggtgcgtgacgcggccggcaa                                                                              <  1:1643905‑M2/151‑75 (MQ=255)
                                                                           cGCCAATAACCTTACCGCGCCGGACATCGACGGCGGCGACACAACGCCACCGGAGGCCCCGACCAATCTGGTGATCggcgctgccggcagccagctcagcggtcgaggcgaagccggctctaccgtgcaggtgcgtgacgtggcaggcaac                                                                             <  1:1076696‑M2/151‑76 (MQ=255)
                                                                             ccAATAACCTTACCGCGCCGGACATCGACGGCGGCGACACAACGCCACCGGAGGCCCCGACCAATCTGGTGATCggcgctgccggcagccagctcagcggtcgaggcgaagccggctctaccgtgcaggtgcgtgacgtggcaggcaacat                                                                           <  1:2803436‑M2/151‑78 (MQ=255)
                                                                              cAATAACCTTACCGCGCCGGACATCGACGGCGGCGACACAACGCCACCGGAGGCCCCGACCAATCTGGTGATCggcgctgccggcagccagctcagcggtcgaggcgaagccggctctaccgtgcaggtgcgtgacgtggcaggcaacatc                                                                          >  2:311747‑M2/1‑73 (MQ=255)
                                                                              cAATAACCTTACCGCGCCGGACATCGACGGCGGCGACACAACGCCACCGGAGGCCCCGACCAATCTGGTGATCggcgctgccggcagccagctcagcggtcgaggcgaagccggctctaccgtgcaggtgcgtgacgcggccggcaacatc                                                                          <  1:5311676‑M2/151‑79 (MQ=255)
                                                                                   aCCTTACCGCGCCGGACATCGACGGCGGCGACACAACGCCACCGGAGGCCCCGACCAATCTGGTGATCggcgctgccggcagccagctcagcggtcgaggcgaagccggctctaccgtgcaggtgcgtgacgtggcaggcaacatcctcgc                                                                     <  1:605949‑M2/151‑84 (MQ=255)
                                                                                     cTTACCGCGCCGGACATCGACGGCGGCGACACAACGCCACCGGAGGCCCCGACCAATCTGGTGATCggcgctgccggcagccagctcagcggtcgaggcgaagccggctctaccgtgcaggtgcgcgacgtggcaggcaccatcctcgcgc                                                                   <  2:2815616‑M2/151‑86 (MQ=255)
                                                                                         ccGCGCCGGACATCGACGGCGGCGACACAACGCCACCGGAGGCCCCGACCAATCTGGTGATCggcgctgccggcagccagctcagcggtcgaggcgaagccggctctaccgtgcaggtgcgtgacgtggcaggcaacatcctcgcgaccgg                                                               >  1:865496‑M2/1‑62 (MQ=255)
                                                                                         ccGCGCCGGACACCGACGGCGGCGACACAGCGCCACCGGAGGCCCCGACCAATCTGGTGATCAACCCTGCCGGCAGCCAGCTGACCGGTCGCGGTGAAGCCGGTGCCGGCCTTCAGGTGCGCGATGGCGCAGGCACCGTAGTTGCCACggg                                                               <  2:921639/151‑1 (MQ=255)
                                                                                            cgcCGGACATCGACGGCGGCGACACAACGCCACCGGAGGCCCCGGCCAATCTGGTGATCAACCCTGCCGGCAGCCAGCTGACCGGTCGCGGTGAAGCCGGTGCCGGCCTTCAGGTGCGCGATGGCGCAGGCACCGTAGTTGCCACGGGCAc                                                            <  2:1092902/151‑1 (MQ=255)
                                                                                             gcCGGACATCGACGGCGGCGACACAACGCCACCGGAGGCCCCGACCAATCTGGTGATCggcgctgccggcagccagctcagcggtcgaggcgaagccggctctaccgtgcaggtgcgtgacgtggcaggcaacatcctcgcgaccggcacc                                                           >  1:1961903‑M2/1‑58 (MQ=255)
                                                                                               cGGACATCGACGGCGGCGACACAACGCCACCGGAGGCCCCGACCAATCTGGTGATCggcgctgccggcagccagctcagcggtcgaggcgaagccggctctaccgtgcaggtgcgtgacgcggccggcaacatcctcgcgaccggcaccgt                                                         <  2:1871696‑M2/151‑96 (MQ=255)
                                                                                               cGGACATCGACGGCGGCGACACAACGCCACCGGAGGCCCCGACCAATCTGGTGATCAACCCTGCCGGCAGCCAGCTGACCGGTCGCGGTGAAGCCGGTGCCGGCCTTCAGGTGCGCGATGGCGCAGGCACCGTAGTTGCCACGGGCACGGt                                                         >  2:2482080/1‑151 (MQ=255)
                                                                                                ggACATCGACGGCGGCGACACAACGCCACCGGAGGCCCCGACCAATCTGGTGATCggcgctgccggcagccagctcagcggtcgaggcgaagccggctctaccgtgcaggtgcgtgacgtggcaggcaacatcctcgcgaccggcaccgtc                                                        >  2:4398039‑M2/1‑55 (MQ=255)
                                                                                                  aCATCGACGGCGGCGACACAACGCCACCGGAGGCCCCGACCAATCTGGTGATCAACCCTGCCGGCAGCCAGCTGACCGGTCGCGGTGAAGCCGGTGCCGGTCTTCAGGTGCGCGATGGCGCAGGCACCGTAGTTGCCACGGGCACGGTCaa                                                      <  2:3076562/151‑1 (MQ=255)
                                                                                                    cgcgccggcggCGACCCAACGCCACCGGAGGCCCCGACCAATCTGGTGATCAACCCTGCCGGCAGCCAGCTGACCGGTCGCGGTGAAGCCGGTGCCGGCCTTCAGGTGCGCGATGGCGCAGGCACCGTAGTTGCCACGGGCACGGTCAATc                                                    <  2:3926647/146‑1 (MQ=255)
                                                                                                    aTCGACGGCGGCGACACAACGCCACCGGAGGCCCCGACCAATCTGGTGATCggcgctgccggcagccagctcagcggtcgaggcgaagccggctctaccgtgcaggtgcgtgacgtggctggcaacatcctcgcgaccggcaccgtcgctg                                                    <  2:2656670‑M2/151‑101 (MQ=255)
                                                                                                    aTCGACGGCGGCGACACAACGCCACCGGAGGCCCCGACCAATCTGGTGATCggcgctgccggcagccagctcagcggtcgaggcgaagccggctctaccgtgcaggtgcgtgacgcggccggcaacatcctcgcgaccggcaccgtcgctg                                                    >  2:677209‑M2/1‑51 (MQ=255)
                                                                                                    aTCGACGGCGGCGACACAACGCCACCGGAGGCCCCGACCAATCTGGTGATCggcgctgccggcagccagctcagcggtcgaggcgaagccggctctaccgtgcaggtgcgtgacgcggccggcaacatcctcgcgaccggcaccgtcgctg                                                    <  2:3280433‑M2/151‑101 (MQ=255)
                                                                                                    aTCGACGGCGGCGACACAACGCCACCGGAGGCCCCGACCAATCTGGTGATCggcgctgccggcagccagctcagcggtcgaggcgaagccggctctaccgtgcaggtgcgcgatgccggcggcaccgtccttgggaccggcgtcgtcgctg                                                    <  1:3256799‑M2/151‑101 (MQ=255)
                                                                                                     ccgACGGCGGCGACGCAGCGCCACCGGAGGCCCCGACCAATCTGGTGATCggcgctgccggcagccagctcagcggtcgaggcgaagccggctctaccgtgcaggtgcgtgacgtggcaggcaacatcctcgcgaccggcaccgtcgctgc                                                   >  2:4304545‑M2/2‑50 (MQ=255)
                                                                                                      cGACGGCGGCGACACAACGCCACCGGAGGCCCCGACCAATCTGGTGATCggcgctgccggcagccagctcagcggtcgaggcgaagccggctctaccgtgcaggtgcgtgacgtggcaggcaacatcctcgcgaccggcaccgtcgctgca                                                  >  1:1416077‑M2/1‑49 (MQ=255)
                                                                                                       gACGGCGGCGACACAACGCCACCGGAGGCCCCGACCAATCTGGTGATCAACCCTGCCGGCAGCCAGCTGACCGGTCGCGGTGAAGCCGGTGCCGGCCTTCAGGTGCGCGATGGCGCAGGCACCGTAGTTGCCACGGGCACGGTCAATCCgg                                                 >  2:611701/1‑151 (MQ=255)
                                                                                                         cggcggCGACACAACGCCACCGGAGGCCCCGACCAATCTGGTGATCggcgctgccggcagccagctcagcggtcgaggcgaagccggctctaccgtgcaggtgcgtgacgcggccggcaacatcctcgcgaccggcaccgtcgctgcagat                                               >  1:1851584‑M2/1‑46 (MQ=255)
                                                                                                         cggcggCGACACAACGCCACCGGAGGCCCCGACCAATCTGGTGATCggcgcggccggcagccagctcagcggtcgaggcgaagccggctctaccgtgcaggtgcgtgacgtggcaggcaacatcctcgcgaccggcaccgtcgctgcagat                                               >  1:4028260‑M2/1‑46 (MQ=255)
                                                                                                         cggcggCGACACAACGCCACCGGAGGCCCCGACCAATCTGGTGATCAACCCTGCCGGCAGCCAGCTGACCGGTCGCGGTGAAGCCGGTGCCGGCCTTCAGGTGCGCGATGGCGCAGGCACCGTAGTTGCCACGGGCACGGTCAATCCGGAt                                               <  1:101720/151‑1 (MQ=255)
                                                                                                          gggggcGACAAAACGCCAGCGGAGGCCCCGACCAATCTGGTGATCggcgctgccggcagccagctcagcggtagaggagaagccggctctaccgtgcaggtgcgtgacgcggccggcaacatcctcgcgaccggcaccgtcgctgcagatg                                              >  2:1715720‑M2/1‑45 (MQ=255)
                                                                                                          ggcggcGACACAACGCCACCGGAGGCCCCGACCAATCTGGTGATCggcgctgccggcagccagctcagcggtcgaggcgaagccggctctaccgtgcaggtgcgtgacgtggcaggcaacatcctcgcgaccggcaccgtcgctgcagatg                                              >  1:3415312‑M2/1‑45 (MQ=255)
                                                                                                          ggcggcGACACAACGCCACCGGAGGCCCCGACCAATCTGGTGATCggcgctgccggcagccagctcagcggtcgaggcgaagccggctctaccgtgcaggtgcgcgacgcggccgccaacctcctcgccaccggcatcttcgctaccggag                                              <  2:2564052‑M2/151‑107 (MQ=255)
                                                                                                            cggcgACACAACGCCACCGGAGGCCCCGACCAATCTGGTGATCggcgctgccggcagccagctcagcggtcgaggcgaagccggctctaccgtgcaggtgcgtgacgcggccggcaacatcctcgcgaccggcaccgtcgctgcagatggc                                            >  1:741006‑M2/1‑43 (MQ=255)
                                                                                                            cggcgACACAACGCCACCGGAGGCCCCGACCAATCTGGTGATCAACCCTGCCGGCAGCCAGCTGACCGGTCGCGGTGAAGCCGGTGCCGGCCTTCAGGTGCGCGATGGCGCAGGCACCGTAGTTGCCACGGGCACGGTCAATCCGGATGGc                                            <  1:439045/151‑1 (MQ=255)
                                                                                                            cggcgACACAACGCCACCGGAGGCCCCGACCAATCTGGTGATCAACCCTGCCGGCAGCCAGCTGACCGGTCGCGGTGAAGCCGGTGCCGGCCTTCAGGTGCGCGATGGCGCAGGCACCGTAGTTGCCACGGGCACGGTCAATCCGGATGGc                                            >  2:2067382/1‑151 (MQ=255)
                                                                                                             ggcgACACAACGCCGCCGGAGGCCCCGACCAATCTGGTGATCggcgctgccggcagccagctcagcggtcgaggcgaagccggctctaccgtgcaggtgcgtgacgcggccggcaacatcctcgcgaccggcaccgtcgctgcagatggca                                           >  2:5294074‑M2/1‑42 (MQ=255)
                                                                                                             ggcgACACAACGCCACCGGAGGCCCCGACCAATCTGGTGATCggcgctgccggcagccagctcagcggtcgaggcgaagccggctctaccgtgcaggtgcgtgacgtggcaggcaacatcctcgcgaccggccccgtcgctgcagatggcc                                           <  1:3874233‑M2/151‑110 (MQ=255)
                                                                                                             ggcgACACAACGCCACCGGAGGCCCCGACCAATCTGGTGATCggcgctgccggcagccagctcagcggtcgaggcgaagccggctctaccgtgcaggtgcgtgacgtggcaggcaacatcctcgcgaccggcaccgccgctgcagatggcc                                           <  2:5417635‑M2/151‑110 (MQ=255)
                                                                                                               cgACACAACGCCACCGGAGGCCCCGACCAATCTGGTGATCAACCCTGCCGGCAGCCAGCTGACCGGTCGCGGTGAAGCCGGTGCCGGCCTTCAGGTGCGCGATGGCGCAGGCACCGTAGTTGCCACGGGCACGGTCaa                                                      <  2:3754829/138‑1 (MQ=255)
                                                                                                                gACACAACGCCACCGGAGGCCCCGACCAATCTGGTGATCggcgctgccggcagccagctcagcggtcgaggcgaagccggctctaccgtgcaggtgcgtgacgtggcaggcaacatcctcgcgaccggcaccgtcgctgcagatggcacct                                        <  2:1014425‑M2/151‑113 (MQ=255)
                                                                                                                 acacAACGCCACCGGAGGCCCCGACCAATCTGGTGATCAACCCTGCCGGCAGCCAGCTGACCGGTCGCGGTGAAGCCGGTGCCGGCCTTCAGGTGCGCGATGGCGCAGGCACCGTAGTTGCCACGGGCACGGTCAATCCGGATGGCACCtt                                       >  2:2414497/1‑151 (MQ=255)
                                                                                                                   acaACGCCACCGGAGGCCCCGACCAATCTGGTGATCAACCCTGCCGGCAGCCAGCTGACCGGTCGCGGTGAAGCCGGTGCCGGCCTTCAGGTGCGCGATGGCGCAGGCACCGTAGTTGCCACGGGCACGGTCAATCCGGATGGCACCTTCg                                     <  1:2146621/151‑1 (MQ=255)
                                                                                                                      aCGCCACCGGAGGCCCCGACCGATCTGGTGATCAGCCCTGCCGGCAGCCAGCTGACCGGTCGCGGTGAAGCCGGTGCCGGCCTTCAGGTGCGCGATGGCGCAGGCACCGTAGTTGCCACGGGCACGGTCAATCCGGATGGCACCTTCGCCa                                  <  1:3204645/151‑1 (MQ=255)
                                                                                                                       cGCCACCGGAGGCCCCGACCAATCTGGTGATCggcgctgccggcagccagctcagcggtcgaggcgaagccggctctaccgtgcaggtgcgtgacgtggcaggcaacatcctcgcgaccggcaccgtcgctgcagatggcaccttcaccat                                 >  1:1715326‑M2/1‑32 (MQ=255)
                                                                                                                       cGCCACCGGAGGCCCCGACCAATCTGGTGATCAACCCTGCCGGCAGCCAGCTGACCGGTCGCGGTGAAGCCGGTGCCGGCCTTCAGGTGCGCGATGGCGCAGGCACCGTAGTTGCCACGGGCACGGTCAATCCGGATGGCACCTTCGCCAt                                 <  1:4607639/151‑1 (MQ=255)
                                                                                                                          cACCGGAGGCCCCGACCAATCTGGTGATCAACCCTGCCGGCAGCCAGCTGACCGGTCGCGGTGAAGCCGGTGCCGGCCTTCAGGTGCGCGATGGCGCAGGCACCGTAGTTGCCACGGGCACGGTCAATCCGGATGGCACCTTCGCCATCAc                              <  1:1938099/151‑1 (MQ=255)
                                                                                                                            ccGGAGGCCCCGACCAATCTGGTGATCggcgctgccggcagccagctcagcggtcgaggcgaagccggctctaccgtgcaggtgcgtgacgcggccggcaacatcctcgcgaccggcaccgtcgctgcagatggccccttcaccatcaccc                            <  2:485871‑M2/151‑125 (MQ=255)
                                                                                                                               gAGGCCCCGACCAATCTGGTGATCAACCCTGCCGGCAGCCAGCTGACCGGTCGCGGTGAAGCCGGTGCCGGCCTTCAGGTGCGCGATGGCGCAGGCACCGTAGTTGCCACgg                                                                <  1:3323624/112‑1 (MQ=255)
                                                                                                                                   ccccGACCAATCTGGTGATCAACCCTGCCGGCAGCCAGCTGACCGGTCGCGGTGAAGCCGGTGCCGGCCTTCAGGTGCGCGATGGCGCAGGCACCGTAGTTGCCACGGGCACGGTCAATCCGGATGGCACCTTCGCCATCACGTTGAAccc                     <  1:648609/151‑1 (MQ=255)
                                                                                                                                      cGACCAATCTGGTGATCAACCCTGCCGGCAGCCAGCTGACCGGTCGCGGTGAAGCCGGTGCCGGCCTTCAGGTGCGCGATGGCGCAGGCACCGTAGTTGCCACGGGCACGGTCAATCCGGATGGCACCTTCCCCACCACGTTGAACCCGGc                  >  2:1664555/1‑151 (MQ=255)
                                                                                                                                                      |                                                                                                                                                      
CACCCTCGACCCGCCACAGGTAGACGGCGAAGTGCTGCAAGTGACGGCCACCGATGCGGCAGGCAACGCCTCCACCGCCAATAACCTTACCGCGCCGGACATCGACGGCGGCGACACAACGCCACCGGAGGCCCCGACCAATCTGGTGATCAACCCTGCCGGCAGCCAGCTGACCGGTCGCGGTGAAGCCGGTGCCGGCCTTCAGGTGCGCGATGGCGCAGGCACCGTAGTTGCCACGGGCACGGTCAATCCGGATGGCACCTTCGCCATCACGTTGAACCCGGCCATCACCGATGGCAGT  >  CP009974/1158535‑1158835

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.