BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	CP009974	5,273,059	Δ2,603 bp		RPPX_23450–[RPPX_23460]	RPPX_23450, RPPX_23455, [RPPX_23460]

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	CP009974	5273059–5275655	5275661	7–2603	207 [1]	[0] 208	RPPX_23450–[RPPX_23460]	RPPX_23450,RPPX_23455,[RPPX_23460]

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009974	= 5273058	1 (0.000)	196 (0.760)	136/286	1.2	99.8%	intergenic (‑275/+106)	RPPX_23445/RPPX_23450	transporter/ATPase AAA
*	?	CP009974	5275662 =	0 (0.000)	196 (0.760)	136/286	1.2	99.8%	coding (38/1266 nt)	RPPX_23460	GntR family transcriptional regulator

Only 100 of 208 total aligned reads displayed.

CCTGCGTGGCTGCCTGCCAGAAAAGTGTCCGGATGACCGTGGAGTCGGTGTCCGGATGCTCGTGGAATGAGTGTCCGGATCAGCGTGGAATCACTGTCCGGATGCGCGTGGAATGGGTGTCCGAGTCAGCGTGGAATCCGCAGCCTATGAAAGGTTGATGGCTGAGGGTGTACTCAACTCTCGTCCTGGCTCCGGCTTTTACGTAGCCGGGCCAGTGGCGCCCTTGGTACTCACCGAACTCGGCCCAAGGCTTGATCGTGAAGTGGACCCGTTGTGGATCTCGCGCCAGTCTCTTGACAC  >  CP009974/5275513‑5275812

acgggacggaacgcgtattcgaactgtcatgggtgaaatccagtcgcggatagcctctcgaacctacacaccaggcgcaagaattccctcggtgcgtgcgatggctcagaccatgcaggtgtcggtttctacggtgcttgaggcctatgaa                                                                                                                                                       <  1:5273431‑M2/2‑1 (MQ=255)

  gggacggaacgcgtattcgaactgtcatgggtgaaatccagtcgcggatagcctctcgaacctacacaccaggcgcaagaattccctcggtgcgtgcgatggctcagaccatgcaggtgtcggtttctacggtgcttgaggcctatgAAAg                                                                                                                                                     <  1:2659704‑M2/4‑1 (MQ=255)

      cgcaacgcgtattcgaactgtcatgggtgaaatccggtcgcggatggcctcgcgaccctacacaccaggcgcaagaattccctcggtgcgtgcgatggctcagaccatgcaggtgtcggtttctacggtgcttgaggcctatgAAAGGTTg                                                                                                                                                 <  2:2911445‑M2/8‑1 (MQ=255)

       ggaacgcgtattcgaactgtcatgggtgaaatccagtcgcggatagcctctcgaacctacacaccaggcgcaagaattccctcggtgcgtgcgatggctcagaccatgcaggtgtcggtttctacggtgcttgaggcctatgAAAGGTTGa                                                                                                                                                >  2:1655731‑M2/143‑151 (MQ=255)

        gaacgcgtattcgaactgtcatgggtgaaatccagtcgcggatagcctctcgaacctacacaccaggcgcaagaattccctcggtgcgtgcgatggctcagaccatgcaggtgtcggtttctacggtgcttgaggcctatgAAAGGTTGAt                                                                                                                                               >  2:1729496‑M2/142‑151 (MQ=255)

         aacgcgtattcgaactgtcatgggtgaaatccagtcgcggatagcctctcgaacctacacaccaggcgcaagaattccctcggtgcgtgcgatggctcagaccatgcaggtgtcggtttctacggtgcttgaggcctatgAAAGGTTGATg                                                                                                                                              <  1:2021562‑M2/11‑1 (MQ=255)

         aacgcgtattcgaactgtcatgggtgaaatccagtcgcggatagcctctcgaacctacacaccaggcgcaagaatcccctcggtgcgtgcgatggcccagaccatgcaggggtcggtttctacggcggttgaggcccatgAAAGGTtgacg                                                                                                                                              >  2:340971‑M2/141‑149 (MQ=255)

            gcgtattcgaactgtcatgggtgaaatccagtcgcggatagcctctcgaacctacacaccaggcgcaagaattccctcggtgcgtgcgatggctcagaccatgcaggtgtcggtttctacggtgcttgaggcctatgAAAGGTTGATGGCt                                                                                                                                           <  1:1632188‑M2/14‑1 (MQ=255)

             cgtatacgaactgtcatgggtgaaatccagtcgcggatagcctctcgaacctacacaccaggcgcaagaattccctcggtgcgtgcgatggctcagaccatgcaggtgtcggtttctacggtgcttgaggcctatgAAAGGTTGATGGCTg                                                                                                                                          <  2:1282993‑M2/15‑1 (MQ=255)

               tattcgaactgtcatgggtgaaatccagtcgcggatagcctctcgaacctacacaccaggcgcaagaattccctcggtgcgtgcgatggctcagaccatgcaggtgtcggtttctacggtgcttgaggcctatgAAAGGTTGATGGCTGAg                                                                                                                                        >  1:800746‑M2/135‑151 (MQ=255)

               tattcgaactgtcatgggtgaaatccagtcgcggatagcctctcgaacctacacaccaggcgcaagaattccctcggtgcgtgcgatggctcagaccatgcaggtgtcggtttctacggtgcttgaggcctatgAAAGGTTGATGGCTGAg                                                                                                                                        >  1:5188665‑M2/135‑151 (MQ=255)

                   cgaactgtcatgggtgaaatccagtcgcggatagcctctcgaacctacacaccaggcgcaagaattccctcggtgcgtgcgatggctcagaccatgcaggtgtcggtttctacggtgcttgaggcctatgAAAGGTTGATGGCTGAGGgtg                                                                                                                                    <  1:3565311‑M2/21‑1 (MQ=255)

                     aactgtcatgggtgaaatccagtcgcggatagcctctcgaacctacacaccaggcgcaagaattccctcggtgcgtgcgatggctcagaccatgcaggtgtcggtttctacggtgcttgaggcctatgAAAGGTTGATg                                                                                                                                              <  1:1910739‑M2/11‑1 (MQ=255)

                     aactgtcatgggtgaaatccagtcgcggatagcctctcgaacctacacaccaggcgcaagaattccctcggtgcgtgcgatggctcagaccatgcaggtgtcggtttctacggtgcttgaggcctatgAAAGGTTGATGGCTGAGGGTGTa                                                                                                                                  >  1:1934851‑M2/129‑151 (MQ=255)

                     aactgtcatgggtgaaatccagtcgcggatagcctctcgaacctacacaccaggcgcaagaattccctcggtgcgtgcgatggctcagaccatgcaggtgtcggtttctacggtgcttgaggcctatgAAAGGTTGATGGCTGAGGGTGTa                                                                                                                                  >  2:3964055‑M2/129‑151 (MQ=255)

                     aactgtcatgggtgaaatccagtcgcggatagcctctcgaacctacacaccaggcgcaagaattccctcggtgcgtgcgatggctcagaccatgcaggggtcgggttctacggtgcttgaggcctatgAAGGGTTGATGGCTGGGggtgtc                                                                                                                                  >  2:1220966‑M2/129‑150 (MQ=255)

                       ctgtcatgggtgaaatccagtcgcggatagcctctcgaacctacacaccaggcgcaagaattccctcggtgcgtgcgatggctcagaccatgcaggtgtcggtttctacggtgcttgaggcctatgAAAGGTTGATGGCTGAGGGTGTACt                                                                                                                                >  1:276128‑M2/127‑151 (MQ=255)

                       ctgtcatgggtgaaatccagtcgcggatagcctctcgaacctacacaccaggcgcaagaattccctcggtgcgtgcgatggcccagaccatgcaggtgtcggtttctacggtgcttgaggaccaggAAAGGGTGATGGATGAGGGGgtagt                                                                                                                                >  2:4997473‑M2/127‑149 (MQ=255)

                          tcatgggtgaaatccagtcgcggatagcctctcgaacctacacaccaggcgcaagaattccctcggtgcgtgcgatggctcagaccatgcaggtgtcggtttctacggtgcttgaggcctatgAAAGGTTGATGGCTGAGGGTGTACTCaa                                                                                                                             >  2:2621766‑M2/124‑151 (MQ=255)

                           catgggtgaaatccagtcgcggatagcctctcgaacctacacaccaggcgcaagaattccctcggtgcgtgcgatggctcagaccatgcaggtgtcggtttctacggtgcttgaggcctatgAAAGGTTGATGGCTGAGGGTGTACTCAAc                                                                                                                            <  1:2923026‑M2/29‑1 (MQ=255)

                            atgggtgaaatccagtcgcggatagcctctcgaacctacacaccaggcgcaagaattccctcggtgcgtgcgatggctcagaccatgcaggtgtcggtttctacggtgcttgaggcctatgAAAGGTTGATGGCTGAGGGTGTACTCAAct                                                                                                                           <  2:3517605‑M2/30‑1 (MQ=255)

                             tgggtgaaatccagtcgcggatagcctctcgaacctacacaccaggcgcaagaattccctcggtgcgtgcgatggctcagaccatgcaggtgtcggtttctacggtgcttgaggcctatgAAAGGTTGATGGCTGAGGGTGTACTCAActc                                                                                                                          >  1:4112419‑M2/121‑151 (MQ=255)

                              gggtgaaatccagtcgcggatagcctctcgaacctacacaccaggcgcaagaattccctcggtgcgtgcgatggctcagaccatgcaggtgtcggtttctacggtgcttgaggcctatgAAAGGTTGATGGCTGAGGGTGTACTCAActct                                                                                                                         <  2:802670‑M2/32‑1 (MQ=255)

                                 tgaaatccagtcgcggatagcctctcgaacctacacaccaggcgcaagaattccctcggtgcgtgcgatggctcagaccatgcaggtgtcggtttctacggtgcttgaggcctatgAAAGGTTGATGGCTGAGGGTGTACTCAACTCTCGt                                                                                                                      >  1:2149985‑M2/117‑151 (MQ=255)

                                 tgaaatccagtcgcggatagcctctcgaacctacacaccaggcgcaagaattccctcggtgcgtgcgatggctcagaccatgcaggtgtcggtttctacggtgcttgaggcctatgAAAGGTTGATGGCTGAGGGTGTACTCAACTCTCGt                                                                                                                      >  2:5367739‑M2/117‑151 (MQ=255)

                                 tgaaatccagtcgcggatagcctctcgaacctacacaccaggcgcaagaattccctcggtgcgtgcgatggctcagaccatgcaggtgtcggtttctacggtgcttgaggcctatgAAAGGTTGATGGCTGAGGGTGTACTCAACTCTCGt                                                                                                                      >  2:790212‑M2/117‑151 (MQ=255)

                                  gaaatccagtcgcggatagcctctcgaacctacacaccaggcgcaagaattccctcggtgcgtgcgatggctcagaccatgcaggtgtcggtttctacggtgcttgaggcctatgAAAGGTTGATGGCTGAGGGTGTACTCAACTCTCGTc                                                                                                                     >  2:3836592‑M2/116‑151 (MQ=255)

                                  gaaatccagtcgcggatagcctctcgaacctacacaccaggcgcaagaattccctcggtgcgtgcgatggctcagaccatgcaggtgtcggtttctacggtgcttgaggcctatgAAAGGTTGATGGCTGAGGGTGTACTCAACTCTCGTc                                                                                                                     <  1:3401747‑M2/36‑1 (MQ=255)

                                    aatccagtcgcggatagcctctcgaacctacacaccaggcgcaagaattccctcggtgcgtgcgatggctcagaccatgcaggtgtcggtttctacggtgcttgaggcctatgAAAGGTTGATGGCTGAGGGTGTACTCAACTCTCGTCCt                                                                                                                   >  1:421913‑M2/114‑151 (MQ=255)

                                       ccagtcgcggatagcctctcgaacctacacaccaggcgcaagaattccctcggtgcgtgcgatggctcagaccatgcaggtgtcggtttctacggtgcttgaggcctatgAAAGGTTGATGGCTGAGGGTGTACTCAACTCTCGTCCTGGc                                                                                                                <  2:1336681‑M2/41‑1 (MQ=255)

                                       ccagtcgcggatagcctctcgaacctacacaccaggcgcaagaattccctcggtgcgtgcgatggctcagaccatgcaggtgtcggtttctacggtgcttgaggcctatgAAAGGTTGATGGCTGAGGGTGTACTCAACTCTCGTCCTGGc                                                                                                                >  1:1175248‑M2/111‑151 (MQ=255)

                                         agtcgcggatagcctctcgaacctacacaccaggcgcaagaattccctcggtgcgtgcgatggctcagaccatgcaggtgtcggtttctacggtgcttgaggcctatgAAAGGTTGATGGCTGAGGGTGTACTCAACTCTCGTCCTGGCTc                                                                                                              >  2:4956840‑M2/109‑151 (MQ=255)

                                          gtcgcggatagcctctcgaacctacacaccaggcgcaagaattccctcggtgcgtgcgatggctcagaccatgcaggtgtcggtttctacggtgcttgaggcctatgAAAGGTTGATGGCTGAGGGTGTACTCAACTCTCGTCCTGGCTcc                                                                                                             <  2:3625078‑M2/44‑1 (MQ=255)

                                           tcgcggatagcctctcgaacctacacaccaggcgcaagaattccctcggtgcgtgcgatggctcagaccatgcaggtgtcggtttctacggtgcttgaggcctatgAAAGGTTGATGGCTGAGGGTGTACTCAACTCTCGTCCTGGCTCCg                                                                                                            >  2:2181724‑M2/107‑151 (MQ=255)

                                           tcgcggatagcctctcgaacctacacaccaggcgcaagaattccctcggtgcgtgcgatggctcagaccatgcaggtgtcggtttctacggtgcttgaggcctatgAAAGGTTGATGGCTGAGGGTGTACTCAACTCTCGTCCTGGCTCCg                                                                                                            <  2:1433648‑M2/45‑1 (MQ=255)

                                              cggatagcctctcgaacctacacaccaggcgcaagaattccctcggtgcgtgcgatggctcagaccatgcaggtgtcggtttctacggtgcttgaggcctatgAAAGGTTGATGGCTGAGGGTGTACTCAACTCTCGTCCTGGCTCCGGCt                                                                                                         >  1:1556167‑M2/104‑151 (MQ=255)

                                                    gccgctcgaacctgcgcaccaggcgcaacaattccctccgtgcgtgcgacggctcagaccatgcaggtgtcggtttctacggtgcttgaggcctatgAAAGGTTGATGGCTGAGCGTGTACTCAACTCTCGTCCTGGCTCCGGCTTTTACg                                                                                                   <  2:4683814‑M2/54‑1 (MQ=255)

                                                        ctcgaacctacacaccaggcgcaagaattccctcggtgcgtgcgatggctcagaccatgcaggtgtcggtttctacggtgcttgaggcctatgAAAGGTTGATGGCTGAGGGTGTACTCAACTCTCGTCCTGGCTCCGGCTTTTACGTAGc                                                                                               <  1:577779‑M2/58‑1 (MQ=255)

                                                          cgaacctacacaccaggcgcaagaattccctcggtgcgtgcgatggctcagaccatgcaggtgtcggtttctacggtgcttgaggcctatgAAAGGTTGATGGCTGAGGGTGTACTCAACTCTCGTCCTGGCTCCGGCTTTTACGTAGCCg                                                                                             <  2:221996‑M2/60‑1 (MQ=255)

                                                           gaacctacacaccaggcgcaagaattccctcggtgcgtgcgatggctcagactatccaggtgtcggtgtctacggtgcttgaggcctatgAGAGGTGGATGGCTGAGGGTGTCCTGCACTGTCGTCCTGGCTCCGCCTTTTACGTTGCggg                                                                                            >  2:474872‑M2/91‑151 (MQ=255)

                                                            aacctacacaccaggcgcaagaattccctcggtgcgtgcgctggctcagaccatgcaggtgtcggtttctacggtgcttgaagcctatgAAAGGTTGATGGCTGAGGGTGTACTCAACTCTCGTCCTGGCTCCGGCTTTTACGTAGCCggg                                                                                           >  1:3323097‑M2/90‑151 (MQ=255)

                                                            aacctacacaccaggcgcaagaattccctcggtgcgtgcgatggctcagaccatgcaggtgtcggtttctacggtgcttgaggcctatgAAAGGTTGATGGCTGAGGGTGTACTCAACTCTCGTCCTGGCTCCGGCTTTTACGTAGCCggg                                                                                           <  2:2991167‑M2/62‑1 (MQ=255)

                                                             acctacacaccaggcgcaagaattccctcggtgcgtgcgatggctcagaccatgcaggtgtcggtttctacggtgcttgaggcctatgAAAGGTTGATGGCTGAGGGTGTACTCAACTCTCGTCCTGGCTCCGGCTTTTACGTAGCCGGGc                                                                                          >  2:2289359‑M2/89‑151 (MQ=255)

                                                             acctacacaccaggcgcaagaattccctcggtgcgtgcgatggctcagaccatgcaggtgtcggtttctacggtgcttgaggcctatgAAAGGTTGATGGCTGAGGGTGTACTCAACTCTCGTCCTGGCTCCGGCTTTTACGTAGCCGGGc                                                                                          >  2:710793‑M2/89‑151 (MQ=255)

                                                              cctacacaccaggcgcaagaattccctcggtgcgtgcgatggctcagaccatgcaggtgtcggtttctacggtgcttgaggcctatgAAAGGTTGATGGCTGAGGGTGTACTCAACTCTCGTCCTGGCTCCGGCTTTTACGTAGCCGGGcc                                                                                         <  1:4753683‑M2/64‑1 (MQ=255)

                                                              cctacacaccaggcgcaagaattccctcggtgcgtgcgatggctcagaccatgcaggtgtcggtttctacggtgcttgaggcctatgAAAGGTTGATGGCTGAGGGTGTACTCAACTCTCGTCCTGGCTCCGGCTTTTACGTAGCCGGGcc                                                                                         >  2:158693‑M2/88‑151 (MQ=255)

                                                                tacacaccaggcgcaagaattccctcggtgcgtgcgatggctcagaccatgcaggtgtcggtttctacggtgcttgaggcctatgAAAGGTTGATGGCTGAGGGTGTACTCAACTCTCGTCCTGGCTCCGGCTTTTACGTAGCCGGGCCAg                                                                                       >  1:4871711‑M2/86‑151 (MQ=255)

                                                                 acacaccaggcgcaagaattccctcggtgcgtgcgatggctcagaccatgcaggtgtcggtttctacggtgcttgaggcctatgAAAGGTTGATGGCTGAGGGTGTACTCAACTCTCGTCCTGGCTCCGGCTTTTACGTAGCCGGGCCAGt                                                                                      <  1:3776647‑M2/67‑1 (MQ=255)

                                                                    caccaggcgcaagaattccctcggtgcgtgcgatggctcagaccatgcaggtgtcggtttctacggtgcttgaggcctatgAAAGGTTGATGGCTGAGGGTGTACTCAACTCTCGTCCTGGCTCCGGCTTTTACGTAGCCGGGCCAGTGgc                                                                                   <  1:3521840‑M2/70‑1 (MQ=255)

                                                                           cgcaagaattccctcggtgcgtgcgatggctcagaccatgcaggtgtcggtttctacggtgcttgaggcctatgAAAGGTTGATGGCTGAGGGTGTACTCAACTCTCGTCCTGGCTCCGGCTTTTACGTAGCCGGGCCAGTGGCGCCCTTg                                                                            >  2:3117683‑M2/75‑151 (MQ=255)

                                                                            gcaagaattcccgcggtgcgtgcgatggctcagaccatgcaggtgtcggtttctacggtgcttgaggcctatgAAAGGTTGATGGCTGAGGGTGTACTCAACTCTCGTCCTGGCTCCGGCTTTTACGTAGCCGGGCCAGTGGCGCCCTTgg                                                                           <  2:5188665‑M2/78‑1 (MQ=255)

                                                                                 aattccctcggtgcgtgcgatggctcagaccatgcaggtgtcggtttctacggtgcttgaggcctatgAAAGGTTGATGGCTGAGGGTGTACTCAACTCTCGTCCTGGCTCCGGCTTTTACGTAGCCGGGCCAGTGGCGCCCTTGGTACTc                                                                      <  2:174488‑M2/83‑1 (MQ=255)

                                                                                   ttccctcggtgcgtgcgatggctcagaccatgcaggtgtcggtttctacggtgcttgaggcctatgAAAGGTTGATGGCTGAGGGTGTACTCAACTCTCGTCCTGGCTCCGGCTTTTACGTAGCCGGGCCAGTGGCGCCCTTGGTACTCAc                                                                    <  1:1295343‑M2/85‑1 (MQ=255)

                                                                                    tccctcggtgcgtgcgatggctcagaccatgcaggtgtcggtttctacggtgcttgaggcctatgAAAGGTTGATGGCTGAGGGTGTACTCAACTCTCGTCCTGGCTCCGGCTTTTACGTAGCCGGGCCAGTGGCGCCCTTGGTACTCAcc                                                                   >  1:4552698‑M2/66‑151 (MQ=255)

                                                                                        tcggtgcgtgcgatggctcagaccatgcaggtgtcggtttctacggtgcttgaagcctatgAAAGGTTGATGGCTGAGGGTGTACTCAACTCTCGTCCTGGCTCCGGCTTTTACGTAGCCGGGCCAGTGGCGCCCTTGGTACTCACCGAAc                                                               <  1:1019968‑M2/90‑1 (MQ=255)

                                                                                          ggtgcgtgcgatggctcagaccatgcaggtgtcggtttctacggtgcttgaggcctatgAAAGGTTGATGGCTGAGGGTGTACTCAACTCTCGTCCTGGCTCCGGCTTTTACGTAGCCGGGCCAGTGGCGCCCTTGGTACTCACCGAACTc                                                             >  1:2811122‑M2/60‑151 (MQ=255)

                                                                                          ggtgcgtgcgatggctcagaccatgcaggtgtcggtttctacggtgcttgaggcctatgAAAGGTTGATGGCTGAGGGTGTACTCAACTCTCGTCCTGGCTCCGGCTTTTACGTAGCCGGGCCAGTGGCGCCCTTGGTACTCACCGAACTc                                                             <  2:4808818‑M2/92‑1 (MQ=255)

                                                                                          ggtgcgtgcgatggctcagaccatgcaggtgtcggtttctacggtgcttgaggcctatgAAAGGTTGATGGCTGAGGGTGTACTCAACTCTCGTCCTGGCTCCGGCTTTTACGTAGCCGGGCCAGTGGCGCCCTTGGTACTCACCGAACTc                                                             >  1:2396334‑M2/60‑151 (MQ=255)

                                                                                          ggtgcgtgcgatggctcagaccatgcaggtgtcggtttctacggtgcttgaggcctatgAAAGGTTGATGGCTGAGGGTGTACTCAACTCTCGTCCTGGCTCCGGCTTTTACGTAGCCGGGCCAGTGGCGCCCTTGGTACTCACCGAACTc                                                             <  1:1380466‑M2/92‑1 (MQ=255)

                                                                                             gcgtgcgatggctcagaccatgcaggtgtcggtttctacggtgcttgaggcctatgAAAGGTTGATGGCTGAGGGTGTACTCAACTCTCGTCCTGGCTCCGGCTTTTACGTAGCCGGGCCAGTGGCGCCCTTGGTACTCACCGAACTCGGc                                                          >  1:616766‑M2/57‑151 (MQ=255)

                                                                                              cgtgcgatggctcagaccatgcaggtgtcggtttctacggtgcttgaggcctatgAAAGGTTGATGGCTGAGGGTGTACTCAACTCTCGTCCTGGCTCCGGCTTTTACGTAGCCGGGCCAGTGGCGCCCTTGGTACTCACCGAACTCGGcc                                                         <  1:1716448‑M2/96‑1 (MQ=255)

                                                                                              cgtgcgatggctcagaccatgcaggtgtcggtttctacggtgcttgaggcctatgAAAGGTTGATGGCTGAGGGTGTACTCAACTCTCGTCCTGGCTCCGGCTTTTACGTAGCCGGGCCAGTGGCGCCCTTGGTACTCACCGAACTCGGcc                                                         >  2:3490892‑M2/56‑151 (MQ=255)

                                                                                               gtgcgatggctcagaccatgcaggtgtcggtttctacggtgcttgaggcctatgAAAGGTTGATGGCTGAGGGTGTACTCAACTCTCGTCCTGGCTCCGGCTTTTACGTAGCCGGGCCAGTGGCGCCCTTGGTACTCACCGAACTCGGccc                                                        >  1:3955704‑M2/55‑151 (MQ=255)

                                                                                                tgcgatgtctcagaccatgcaggtgtcggtttctacggtgcttgaggcctatgAAAGGTTGATGGCTGAGGGTGTACTCAACTCTCGTCCTGGCTCCGGCTTTTACGTAGCCGGGCCAGTGGCGCCCTTGGTACTCACCGAACTCGGCCCa                                                       <  2:3329125‑M2/98‑1 (MQ=255)

                                                                                                ggcgatgggtcagaccaggcaggtgtcggtttctacggtgcttgaggcctatgAAAGGTTGATGGCTGAGGGTGTACTCAACTCTCGTCCTGGCTCCGGCTTTTACGTAGCCGGGCCAGTGGCGCCCTTGGTACTCACCGAACTCGGCCCa                                                       <  2:2121760‑M2/98‑1 (MQ=255)

                                                                                                 gcgatggctcagaccatgcaggtgtcggtttctacggtgcttgaggcctatgAAAGGTTGATGGCTGAGGGTGTACTCAACTCTCGTCCTGGCTCCGGCTTTTACGTAGCCGGGCCAGTGGCGCCCTTGGTACTCACCGACCTCGGCCCaa                                                      >  2:251809‑M2/53‑151 (MQ=255)

                                                                                                 gcgatggctcagaccatgcaggtgtcggtttctacggtgcttgaggcctatgAAAGGTTGATGGCTGAGGGTGTACTCAACTCTCGTCCTGGCTCCGGCTTTTACGTAGCCGGGCCAGTGGCGCCCTTGGTACTCACCGAACTCGGCCCaa                                                      >  1:2583074‑M2/53‑151 (MQ=255)

                                                                                                   gatggctcagaccatgcaggtgtcggtttctacggtgcttgaggcctatgAAAGGTTGATGGCTGAGGGTGTACTCAACTCTCGTCCTGGCTCCGGCTTTTACGTAGCCGGGCCAGTGGCGCCCTTGGTACTCACCGAACTCGGCCCAAgg                                                    >  2:2763655‑M2/51‑151 (MQ=255)

                                                                                                      ggctcagaccatgcaggtgtcggtttctacggtgcttgaggcctatgAAAGGTTGATGGCTGAGGGTGTACTCAACTCTCGTCCTGGCTCCGGCTTTTACGTAGCCGGGCCAGTGGCGCCCTTGGTACTCACCGAACTCGGCCCAAGGCtt                                                 <  1:1277324‑M2/104‑1 (MQ=255)

                                                                                                       gctcagaccatgcaggtgtcggtttctacggtgcttgaggcctatgAAAGGTTGATGGCTGAGGGTGTACTCAACTCTCGTCCTGGCTCCGGCTTTTACGTAGCCGGGCCAGTGGCGCCCTTGGTACTCACCGAACTCGGCCCAAGGCTTg                                                <  1:2738217‑M2/105‑1 (MQ=255)

                                                                                                        ctcagaccatgcaggtgtcggtttctacggtgcttgaggcctatgAAAGGTTGATGGCTGAGGGTGTACTCAACTCTCGTCCTGGCTCCGGCTTTTACGTAGCCGGGCCAGTGGCGCCCTTGGTACTCACCGAACTCGGCCCAAGGCTTGa                                               <  2:1564108‑M2/106‑1 (MQ=255)

                                                                                                         tcagaccatgcaggtgtcggtttctacggtgcttgaggcctatgAAAGGTTGATGGCTGAGGGTGTACTCAACTCTCGTCCTGGCTCCGGCTTTTACGTAGCCGGGCCAGTGGCGGCCTTGGTACTCACCGAACTCGGCCCAAGGCTTGAt                                              >  2:3252574‑M2/45‑151 (MQ=255)

                                                                                                         tcagaccatgcaggtgtcggtttctacggtgcttgaggcctatgAAAGGTTGATGGCTGAGGGTGTACTCAACTCTCGTCCTGGCTCCGGCTTTTACGTAGCCGGGCCAGTGGCGCCCTTGGTACTCACCGAACTCGGCCCAAGGCTTGAt                                              >  1:3162136‑M2/45‑151 (MQ=255)

                                                                                                          cagaccatgcaggtgtcggtttctacggtgcttgaggcctatgAAAGGTTGATGGCTGAGGGTGTACTCAACTCTCGTCCTGGCTCCGGCTTTTACGTAGCCGGGCCAGTGGCGCCCTTGGTACTCACCGAACTCGGCCCAAGGCTTGATc                                             <  1:962776‑M2/108‑1 (MQ=255)

                                                                                                            gaccatgcaggtgtcggtttctacggtgcttgaggcctatgAAAGGTTGATGGCTGAGGGTGTACTCAACTCTCGTCCTGGCTCCGGCTTTTACGTAGCCGGGCCAGTGGCGCCCTTGGTACTCACCGAACTCGGCTCAATGCTTGATCGt                                           >  2:441832‑M2/42‑151 (MQ=255)

                                                                                                             accatgcaggtgtcggtttctacggtgctcgaggcctatgAAAGGTTGATGGCTGAGGGTGTACTCAACTCTCGTCCTGGCTCCGGCTTTTACGTAGCCGGGCCAGTGGCGCCCTTGGTACTCACCGACCTCGGCGCAAGGCTTGATCGTg                                          >  2:5424127‑M2/41‑151 (MQ=255)

                                                                                                               catgcaggtgtcggtttctacggtgcttgaggcctatgAAAGGTTGATGGCTGAGGGTGTACTCAACTCTCGTCCTGGCTCCGGCTTTTACGTAGCCGGGCCAGTGGCGCCCTTGGTACTCACCGAACTCGGCCCAAGGCTTGATCGTGaa                                        >  2:3649701‑M2/39‑151 (MQ=255)

                                                                                                                atgcaggtgtcggtttctacggtgcttgaggcctatgAAAGGTTGATGGCTGAGGGTGTACTCAACTCTCGTCCTGGCTCCGGCTTTTACGTAGCCGGGCCAGTGGCGCCCTTGGTACTCACCGAACTCGGCCCAAGGCTTGATCGTGAAg                                       >  2:413740‑M2/38‑151 (MQ=255)

                                                                                                                    aggtgtcggtttctacggtgcttgaggcctatgAAAGGTTGATGGCTGAGGGTGTACTCAACTCTCGTCCTGGCTCCGGCTTTTACGTAGCCGGGCCAGTGGCGCCCTTGGTACTCACCGAACTCGGCCCAAGGCTTGATCATGCAGTGGa                                   >  2:4266738‑M2/34‑151 (MQ=255)

                                                                                                                     ggtgtcggtttctacggtgcttgaggcctatgAAAGGTTGATGGCTGAGGGTGTACTCAACTCTCGTCCTGGCTCCGGCTTTTACGTAGCCGGGCCAGTGGCGCCCTTGGTACTCACCGAACTCGGCCCAAGGCTTGATCGTGAAGTGGAc                                  >  1:3375080‑M2/33‑151 (MQ=255)

                                                                                                                         tcggtttctacggtgcttgaggcctatgAAAGGTTGATGGCTGAGGGTGTACTCAACTCTCGTCCTGGCTCCGGCTTTTACGTAGCCGGGCCAGTGGCGCCCTTGGTACTCACCGAACTCGGCCCAAGGCTTGATCGTGAAGTGGACCCGt                              <  2:2559489‑M2/123‑1 (MQ=255)

                                                                                                                            gtttctacggtgcttgaggcctatgAAAGGTTGATGGCTGAGGGTGTACTCAACTCTCGTCCTGGCTCCGGCTTTTACGTAGCCGGGCCAGTGGCGCCCTTGGTACTCACCGAACTCGGCCCAAGGCTTGATCGTGAAGTGGACCCTTtgt                           <  2:4477122‑M2/126‑1 (MQ=255)

                                                                                                                            gtttctacggtgcttgaggcctatgAAAGGTTGATGGCTGAGGGTGTACTCAACTCTCGTCCTGGCTCCGGCTTTTACGTAGCCGGGCCAGTGGCGCCCTTGGTACTCACCGAACTCGGCCCAAGGCTTGATCGTGAAGTGGACCCGTtgt                           >  1:2309560‑M2/26‑151 (MQ=255)

                                                                                                                             tttctacggtgcttgaggcctatgAAAGGTTGATGGCTGAGGGTGTACTCAACTCTCGTCCTGGCTCCGGCTTTTACGTAGCCGGGCCAGTGGCGCCCTTGGTACTCACCGAACTCGGCCCAAGGCTTGATCGTGAAGTGGACCCGTtgtg                          >  1:181736‑M2/25‑151 (MQ=255)

                                                                                                                               tctacggtgcttgaggcctatgAAAGGTTGATGGCTGAGGGTGTACTCAACTCTCGTCCTGGCTCCGGCTTTTACGTAGCCGGGCCAGTGGCGCCCTTGGTACTCACCGAACTCGGCCCAAGGCTTGATCGTGAAGTGGACCCGTTGTGGa                        >  1:2466955‑M2/23‑151 (MQ=255)

                                                                                                                                ctacggtgcttgaggcctatgAAAGGTTGATGGCTGAGGGTGTACTCAACTCTCGTCCTGGCTCCGGCTTTTACGTAGCCGGGCCAGTGGCGCCCTTGGTACTCACCGAACTCGGCCCAAGGCTTGATCGTGAAGTGGACCCGTTGTGGAt                       >  1:4625925‑M2/22‑151 (MQ=255)

                                                                                                                                 tacggtgcttgaggcctatgAAAGGTTGATGGCTGAGGGTGTACTCAACTCTCGTCCTGGCTCCGGCTTTTACGTAGCCGGGCCAGTGGCGCCCTTGGTACTCACCGAACTCGGCCCAAGGCTTGATCGTGAAGTGGACCCGTTGTGGatt                      >  2:663546‑M2/21‑150 (MQ=255)

                                                                                                                                    ggtgcttgaggcctatgAAAGGTTGATGGCTGAGGGTGTACTCAACTCTCGTCCTGGCTCCGGCTTTTACGTAGCCGGGCCAGTGGCGCCCTTGGTACTCACCGAACTCGGCCCAAGGCTTGATCGTGAAGTGGACCCGTTGTGGATCTcg                   >  1:878621‑M2/18‑151 (MQ=255)

                                                                                                                                    ggtgcttgaggcctatgAAAGGTTGATGGCTGAGGGTGTACTCAACTCTCGTCCTGGCTCCGGCTTTTACGTAGCCGGGCCAGTGGCGCCCTTGGTACTCACCGAACTCGGCCCAAGGCTTGATCGTGAAGTGGACCCGTTGTGGATCTcg                   >  2:639543‑M2/18‑151 (MQ=255)

                                                                                                                                     gtgcttgaggcctatgAAAGGTTGCTGGCTGAGGGTGTACTCAACTCTCGTCCTGGCTCCGGCTTTTACGTAGCCGGGCCAGCGGCGCCCTTGGTACTCACCGAACTCGGCCCAAGGCTTGATCGTGAAGTGGACCCGTTGTGGATCTcgc                  <  2:191803‑M2/135‑1 (MQ=255)

                                                                                                                                      tgcttgaggcctatgAAAGGTTGATGGCTGAGGGTGTACTCAACTCTCGTCCTGGCTCCGGCTTTTACGTAGCCGGGCCAGTGGCGCCCTTGGTACTCACCGACCTCGGCCCAAGGCTTGATCGTGAAGTGGACCCGTTGTGGATCTcgcg                 <  1:157184‑M2/136‑1 (MQ=255)

                                                                                                                                      tgcttgaggcctatgAAAGGTTGATGGCTGAGGGTGTACTCAACTCTCGTCCTGGCTCCGGCTTTTACGTAGCCGGGCCAGTGGCGCCCTTGGTACTCACCGAACTCGGCCCAAGGCTTGATCGTGAAGTGGACCCGTTGTGGATCTcgcg                 <  1:301326‑M2/136‑1 (MQ=255)

                                                                                                                                         ttgaggcctatgAAAGGTTGATGGCTGAGGGTGTACTCAACTCTCGTCCTGGCTCCGGCTTTTACGTAGCCGGGCCAGTGGCGCCCTTGGTACTCACCGAACTCGGCCCAAGGCTTGATCGTGAAGTGGACCCGTTGTGGATCTCGCGCCa              >  2:1152360‑M2/13‑151 (MQ=255)

                                                                                                                                           gaggcctatgAAAGGTTGATGGCTGAGGGTGTACTCAACTCTCGTCCTGGCTCCGGCTTTTACGTAGCCGGGCCAGTGGCGCCCTTGGTACTCACCGAACTCGGCCCAAGGCTTGATCGTGAAGTGGACCCGTTGTGGATCTCGCGCCAGt            >  1:4700671‑M2/11‑151 (MQ=255)

                                                                                                                                            aggcctatgAAAGGTTGATGGCTGAGGGTGTACTCAACTCTCGTCCTGGCTCCGGCTTTTACGTAGCCGGGCCAGTGGCGCCCTTGGTACTCACCGAACTCGGCCCAAGGCTTGATCGTGAAGTGGACCCGTTGTGGATCTCGCGCCAGtc           <  1:732299‑M2/142‑1 (MQ=255)

                                                                                                                                              ccctatgAAGGGTTGAGGTGTGAGGGTGTACTCAACGCTCGTCCGGGCTCCGGCTTTTACGTAGCCGGGCCAGTGGCGCCCGTGGTACTCACCGAACTCGGCCCAAGGCTTGATCTTGAAGTGGACCCGTTGTGGATCTCGCGCCAGtctc         <  2:3303606‑M2/144‑1 (MQ=255)

                                                                                                                                                ctatgAAAGGTTGATGGCTGAGGGTGTACTCAACTCTCGTCCTGGCTCCGGCTTTTACGTAGCCGGGCCAGTGGCGCCCTTGGTACTCACCGAACTCGGCCCAAGGCTTGATCGTGAAGTGGACCCGTTGTGGATCTCGCGCCAGTCTCtt       <  2:878621‑M2/146‑1 (MQ=255)

                                                                                                                                                ctatgAAAGGTTGATGGCTGAGGGTGTACTCAACTCTCGTCCTGGCTCCGGCTTTTACGTAGCCGGGCCAGTGGCGCCCTTGGTACTCACCGAACTCGGCCCAAGGCTTGATCGTGAAGTGGACCCGTTGTGGATCTCGCGCCAGTCTCtt       >  1:3039046‑M2/6‑151 (MQ=255)

                                                                                                                                                  atgAAAGGTTGATGGCTGAGGGTGTACTCAACTCTCGTCCTGGCTCCGGCTTTTACGTAGCCGGGCCAGTGGCGCCCTTGGTACTCACCGAACTCGGCCCAAGGCTTGATCGTGaa                                        <  2:5100222‑M2/113‑1 (MQ=255)

                                                                                                                                                     aaaGGTTGATGGCTGAGGGTGTACTCAACTCTCGTCCTGGCTCCGGCTTTTACGTAGCCGGGCCAGTGGCGCCCTTGGTACTCACCGAACTCGGCCCAAGGCTTGATCGTGAAGTGGACCCGTTGTGGATCTCGCGCCAGTCTCTTGacac  <  1:886365/151‑1 (MQ=255)

CCTGCGTGGCTGCCTGCCAGAAAAGTGTCCGGATGACCGTGGAGTCGGTGTCCGGATGCTCGTGGAATGAGTGTCCGGATCAGCGTGGAATCACTGTCCGGATGCGCGTGGAATGGGTGTCCGAGTCAGCGTGGAATCCGCAGCCTATGAAAGGTTGATGGCTGAGGGTGTACTCAACTCTCGTCCTGGCTCCGGCTTTTACGTAGCCGGGCCAGTGGCGCCCTTGGTACTCACCGAACTCGGCCCAAGGCTTGATCGTGAAGTGGACCCGTTGTGGATCTCGCGCCAGTCTCTTGACAC  >  CP009974/5275513‑5275812

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`