Predicted mutation
evidence seq id position mutation annotation gene description
MC JC CP009974 3,486,773 Δ2,604 bp RPPX_15555RPPX_15560 RPPX_15555, RPPX_15560

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ CP009974 3486773–3489369 3489376 8–2604 234 [2] [0] 231 RPPX_15555–RPPX_15560 RPPX_15555,RPPX_15560

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009974 = 34867722 (0.010)217 (0.870) 143/284 0.6 99.6% intergenic (+358/‑204) RPPX_15550/RPPX_15555 RNA polymerase sigma factor/integrase
?CP009974 3489377 = 0 (0.000)intergenic (+114/+176) RPPX_15560/RPPX_15565 ATPase AAA/ferredoxin

Only 100 of 248 total aligned reads displayed.

TCAGTAAATCAAAGTCGTTTCCAAAGGCTGCATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP009974/3486615‑3486772
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacagggaCATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCCG  >  CP009974/3489377‑3489525
                                                                                                                                                                                                                                                                                                                   
 CAGTAAATCAAAGTCGTTTCCAAAGGCTGCATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCA                                                                                                                                                             <  2:5039906/151‑1
  AGTAAATCAAAGTCGTTTCCAAAGGCTGCATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCAC                                                                                                                                                            >  1:1811204/1‑151
   GTAAATCAAAGTCGTTTCCAAAGGCTGCATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGTGCTGAACCCGCTAGTATTCGAACTGTGCACA                                                                                                                                                           >  2:3429013/1‑151
   GTAAATCAAAGTCGTTTCCAAAGGCTGCATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACA                                                                                                                                                           <  2:2221098/151‑1
    TAAATCAAAGTCGTTTCCAAAGGCTGCATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAG                                                                                                                                                          >  1:5177050/1‑151
    TAAATCAAAGTCGTTTCCAAAGGCTGCATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAG                                                                                                                                                          <  1:2692335/151‑1
     AAATCAAAGTCGTTTCCAAAGGCTGCATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGG                                                                                                                                                         >  1:1028023/1‑151
       ATCAAAGTCGTTTCCAAAGGCTGCATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGA                                                                                                                                                       >  2:2865244/1‑151
       ATCAAAGAAGTTTCAAAAAGATGCATTTTAACAACCCATAGAAAAACATGATTTATTCACCGGTGAATAAATGTGTCCGCGAAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGATCCCGCTAGTATTCGAACTGTGCACAGGGA                                                                                                                                                       <  2:1194081/151‑1
         CAAAGTCGTTTCCAAAGGCTGCATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACA                                                                                                                                                     <  2:1715893/151‑1
                 TTTCCAAAGGCTGCATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGG                                                                                                                                             >  2:1353658/1‑151
                     CAAAGGCTGCATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGGACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTT                                                                                                                                         <  1:3920383/151‑1
                        AGGCTGCATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAG                                                                                                                                      <  2:3185513/151‑1
                          GCTGCATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGA                                                                                                                                    <  1:3654562/151‑1
                           CTGCATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGAT                                                                                                                                   >  2:511157/1‑151
                               ATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAG                                                                                                                               >  2:1878879/1‑151
                                TTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGG                                                                                                                              <  2:1523452/151‑1
                                 TTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGC                                                                                                                             <  2:349383/151‑1
                                 TTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGC                                                                                                                             <  1:5139081/151‑1
                                  TTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCC                                                                                                                            <  1:404984/151‑1
                                  TTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCC                                                                                                                            >  2:3791501/1‑151
                                   TTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCA                                                                                                                           >  2:2927683/1‑151
                                   TTACAACCCATTGAAAAGCATGGTATATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCA                                                                                                                           >  1:479350/1‑151
                                    aacacaCCATGGAAAAGAATGGTTTATTCCCCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGATCACCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAA                                                                                                                          <  1:1407577/145‑1
                                       AACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGA                                                                                                                       >  2:3514181/1‑151
                                           CATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTC                                                                                                                   <  1:1615991/151‑1
                                           CATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTC                                                                                                                   <  2:1094264/151‑1
                                            ATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCG                                                                                                                  <  1:2777633/151‑1
                                            ATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCG                                                                                                                  >  2:4424284/1‑151
                                            ATTGAAAAGCACGGTTTATTCACCGGTGAATAAAAGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCCCACGGACATGCACAGGCTTTCAGGATCACGGCCAAGGACGTCG                                                                                                                  >  2:5183952/1‑151
                                                AAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAG                                                                                                              >  2:3182062/1‑151
                                                AAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAG                                                                                                              <  2:4058460/151‑1
                                                AAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAG                                                                                                              >  1:3828310/1‑151
                                                   AGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAG                                                                                                           <  1:846079/151‑1
                                                   AGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAG                                                                                                           >  2:4982194/1‑151
                                                     CATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCG                                                                                                         >  1:4941955/1‑151
                                                     CATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCG                                                                                                         <  2:771622/151‑1
                                                      ATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGA                                                                                                        >  1:1529160/1‑151
                                                        GGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATT                                                                                                      <  1:2106884/151‑1
                                                        GGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATT                                                                                                      >  2:391903/1‑151
                                                        GGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATT                                                                                                      <  1:2866821/151‑1
                                                            TATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCAT                                                                                                  <  2:236193/151‑1
                                                                 ACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCCAGTATTCGTACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGTCGTCGCAAGAAGCGATTTCATCAGGA                                                                                             >  1:1006568/1‑151
                                                                   CGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATG                                                                                           <  1:2121582/151‑1
                                                                     GTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGAT                                                                                         <  1:3287219/151‑1
                                                                       GAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGT                                                                                       <  1:1597046/151‑1
                                                                        AATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTT                                                                                      >  2:1998375/1‑151
                                                                        AATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTT                                                                                      >  1:234690/1‑151
                                                                         ATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTT                                                                                     <  1:3068704/151‑1
                                                                         ATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTT                                                                                     >  1:1567232/1‑151
                                                                          TAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTG                                                                                    <  2:2280940/151‑1
                                                                          TAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTG                                                                                    <  1:865357/151‑1
                                                                              TGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGAC                                                                                <  1:2847073/151‑1
                                                                              TGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGAC                                                                                >  2:656550/1‑151
                                                                               GTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACA                                                                               >  2:4535131/1‑151
                                                                                TGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAA                                                                              >  1:2277661/1‑151
                                                                                  TCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGC                                                                            <  1:1217183/151‑1
                                                                                    CGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAG                                                                          <  2:2602019/151‑1
                                                                                     GCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGG                                                                         <  1:1060617/151‑1
                                                                                     GCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGG                                                                         <  1:4598195/151‑1
                                                                                     GCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGG                                                                         >  1:2881091/1‑151
                                                                                      CGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGG                                                                        >  1:197094/1‑151
                                                                                      CGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGG                                                                        <  1:3050729/151‑1
                                                                                       GGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGA                                                                       >  1:78010/1‑151
                                                                                         AAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACT                                                                     >  2:4306905/1‑151
                                                                                            TACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACG                                                                  <  1:188715/151‑1
                                                                                              ccgTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGA                                                                <  2:4903232/148‑1
                                                                                                   CAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTGGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATACGGATGATGTTTGGGACAAGCAGGGACTGCGGAAAAAA                                                           >  2:4106627/1‑151
                                                                                                     AGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAAT                                                         <  2:87878/151‑1
                                                                                                     AGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAAT                                                         >  1:1171181/1‑151
                                                                                                        TCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTG                                                      >  2:2033810/1‑151
                                                                                                           ATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGC                                                   >  1:713244/1‑151
                                                                                                           ATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGC                                                   >  2:3629347/1‑151
                                                                                                             CGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGCCTACGGAAAAAAATGTGGGCGG                                                 >  2:2640267/1‑151
                                                                                                             CGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGG                                                 >  2:1252878/1‑151
                                                                                                                TTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTC                                              >  2:389762/1‑151
                                                                                                                   CTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAA                                           >  2:4698484/1‑151
                                                                                                                     CGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACC                                         <  1:4722664/151‑1
                                                                                                                        CGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCC                                      >  2:4737395/1‑151
                                                                                                                            CTGAACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTT                                  <  1:3341990/151‑1
                                                                                                                                ACCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTT                              >  1:5221238/1‑151
                                                                                                                                 CCCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTT                             >  2:3107091/1‑151
                                                                                                                                  CCGCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTG                            <  2:4470552/151‑1
                                                                                                                                    GCTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCC                          >  2:2770407/1‑151
                                                                                                                                     CTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCC                         >  1:5055695/1‑151
                                                                                                                                     CTAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCC                         >  2:3069830/1‑151
                                                                                                                                      TAGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCG                        >  1:3539969/1‑151
                                                                                                                                       AGTATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGT                       <  1:1707152/151‑1
                                                                                                                                          ATTCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGG                    >  2:3677633/1‑151
                                                                                                                                            TCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAA                  <  1:4708900/151‑1
                                                                                                                                            TCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAA                  <  1:1000527/151‑1
                                                                                                                                            TCGAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAA                  >  1:4213538/1‑151
                                                                                                                                             ctAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCGAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAA                 <  1:107110/149‑1
                                                                                                                                              GAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAA                >  1:3709839/1‑151
                                                                                                                                              GAACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAA                >  1:1279233/1‑151
                                                                                                                                                ACTGTGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACA              <  1:2389519/151‑1
                                                                                                                                                    TGCACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAA          >  2:373989/1‑151
                                                                                                                                                       ACAGGGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGAAAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGG       >  2:2700671/1‑151
                                                                                                                                                         AGGGACATGCACAGGCTTTCAGAATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCC     <  1:2414219/151‑1
                                                                                                                                                           GGACATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCC   <  1:3629347/151‑1
                                                                                                                                                                                                                                                                                                                   
TCAGTAAATCAAAGTCGTTTCCAAAGGCTGCATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP009974/3486615‑3486772
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacagggaCATGCACAGGCTTTCAGGATGAAGGCCAAGGACGTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCCG  >  CP009974/3489377‑3489525

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.