| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | CP009974 | 3,486,773 | Δ2,604 bp | RPPX_15555–RPPX_15560 | RPPX_15555, RPPX_15560 | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | CP009974 | 3486773–3489369 | 3489376 | 8–2604 | 234 [2] | [0] 231 | RPPX_15555–RPPX_15560 | RPPX_15555,RPPX_15560 |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009974 | = 3486772 | 2 (0.010) | 217 (0.870) | 143/284 | 0.6 | 99.6% | intergenic (+358/‑204) | RPPX_15550/RPPX_15555 | RNA polymerase sigma factor/integrase |
| ? | CP009974 | 3489377 = | 0 (0.000) | intergenic (+114/+176) | RPPX_15560/RPPX_15565 | ATPase AAA/ferredoxin | |||||
Only 100 of 234 total aligned reads displayed.
ATCAAAGTCGTTTCCAAAGGCTGCATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGATGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAGTGATTCCACGCTGATCCGGACACTCATTCCACGAGCATCCGGACACCGACTCCACGGTCATCCGGACACTTTTCTGGCAGGCAGCCACGCAGGATTTAT > CP009974/3486622‑3486920 | aTCAAAGTCGTTTCCAAAGGCTGCATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGA > 2:2865244‑M1/1‑151 (MQ=255) tCAAAGTCGTTTCCAAAGGCTGCATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAc < 1:827334‑M1/151‑2 (MQ=255) cGTTTCCAAAGGCTGCATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcaca < 2:3505739‑M1/151‑9 (MQ=255) tttCCAAAGGCTGCATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacagg > 2:1353658‑M1/1‑141 (MQ=255) ttCCAAAGGCTGCATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggc > 2:4000119‑M1/1‑140 (MQ=255) tCCAAAGGCTGCATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggct < 2:318190‑M1/151‑13 (MQ=255) aGGCTGCATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGCACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcag > 2:2791905‑M1/1‑134 (MQ=255) aGGCTGCATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcag < 2:3185513‑M1/151‑18 (MQ=255) aGGCTGCATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcag > 2:390132‑M1/1‑134 (MQ=255) tGCATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatg < 1:4025724‑M1/151‑22 (MQ=255) aTTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaag < 2:1086004‑M1/151‑25 (MQ=255) ttttACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggc < 1:5139081‑M1/151‑27 (MQ=255) ttttACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggc > 2:262484‑M1/1‑125 (MQ=255) ttttACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctctcaggatgaaggc < 2:2575987‑M1/151‑27 (MQ=255) tttACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggcc < 1:769584‑M1/151‑28 (MQ=255) tttACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggcc > 2:3791501‑M1/1‑124 (MQ=255) ttggcaaccCATTGCGAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggcc < 2:4273531‑M1/147‑28 (MQ=255) ttACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggcca > 2:2927683‑M1/1‑123 (MQ=255) aacacaccatggaaAAGAATGGTTTATTCCCCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGATCACCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaa < 1:1407577‑M1/145‑30 (MQ=255) aCAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaag > 2:3640564‑M1/1‑121 (MQ=255) aCAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaag > 1:391116‑M1/1‑121 (MQ=255) aaCCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaagga < 2:1829260‑M1/151‑33 (MQ=255) cATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtc < 1:1615991‑M1/151‑37 (MQ=255) aTTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcg > 2:4424285‑M1/1‑114 (MQ=255) aTTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcg < 2:4546011‑M1/151‑38 (MQ=255) aTTGAAAAGCACGGTTTATTCACCGGTGAATAAAAGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCCCACGGAcatgcacaggctttcaggatcacggccaaggacgtcg > 2:5183952‑M1/1‑114 (MQ=255) tGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCTCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgca > 2:5006693‑M1/1‑112 (MQ=255) aaaaGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaag > 1:522113‑M1/1‑110 (MQ=255) aaGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaa > 1:58415‑M1/1‑108 (MQ=255) aGCATGGTTTATTCACCGGTGACTAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAAGCCGCTAGTATTCGAACTGTGCACAGGGAcatgcagaggctctcaggatgaaggccaaggacggcgccagaaa > 2:4100642‑M1/1‑107 (MQ=255) aGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaag > 2:4982194‑M1/1‑107 (MQ=255) gCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagc < 2:2038694‑M1/151‑46 (MQ=255) cATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcg < 2:771622‑M1/151‑47 (MQ=255) cATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcg > 2:3839220‑M1/1‑105 (MQ=255) aTGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcga > 1:1529160‑M1/1‑104 (MQ=255) tGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgat < 1:4835689‑M1/151‑49 (MQ=255) ggTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatt < 1:2106884‑M1/151‑50 (MQ=255) tATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcat < 1:1728233‑M1/151‑54 (MQ=255) ttCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatca > 1:1068089‑M1/1‑96 (MQ=255) tCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcag < 2:2266941‑M1/151‑57 (MQ=255) aCCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCCAGTATTCGTACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggtcgtcgcaagaagcgatttcatcagga > 1:1006568‑M1/1‑93 (MQ=255) gTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgat < 1:3287219‑M1/151‑63 (MQ=255) tGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatg > 1:159273‑M1/1‑88 (MQ=255) aaTAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtt > 1:234690‑M1/1‑86 (MQ=255) aTAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgttt > 1:1567232‑M1/1‑85 (MQ=255) tAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttg < 2:2281018‑M1/151‑68 (MQ=255) aaaTGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgg < 1:3682976‑M1/151‑69 (MQ=255) tgtgTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggac > 2:656550‑M1/1‑80 (MQ=255) tgtgTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggac < 1:2847073‑M1/151‑72 (MQ=255) gtgtCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggaca > 1:4726395‑M1/1‑79 (MQ=255) tgtCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaa > 1:2277661‑M1/1‑78 (MQ=255) gtCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaag < 2:4342889‑M1/151‑75 (MQ=255) ccGCGGAAATGCCCTTCAAGGTCCATCGCTTGCTCGCCGGGCTGAAGCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaacaagcgatttcatcacgatgatgtttgggacaagca < 2:3523915‑M1/151‑77 (MQ=255) ccGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagca < 1:3640564‑M1/151‑77 (MQ=255) gcgGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagg > 1:2880770‑M1/1‑73 (MQ=255) cgGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcaggg < 1:3051090‑M1/151‑80 (MQ=255) gAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggac < 2:3694346‑M1/151‑82 (MQ=255) gAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggac > 1:2905138‑M1/1‑70 (MQ=255) tACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacg > 1:4720034‑M1/1‑66 (MQ=255) ccgtgcaAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacgga < 2:4903232‑M1/148‑88 (MQ=255) ttGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaa < 1:2574015‑M1/151‑90 (MQ=255) aaGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaa > 1:1677885‑M1/1‑58 (MQ=255) aaGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactac > 2:1163068‑M1/1‑58 (MQ=255) aaGGTCCATCGCTTGCTCGCCGGGCTGAAACCGCTAGTATTCGACCTGTGCACAGGGAcatgcacaggctttcctgctgaaggcccaggacggcgcacgaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaa > 2:2001289‑M1/1‑58 (MQ=255) aGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaat < 2:87878‑M1/151‑95 (MQ=255) aGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaat > 1:1171181‑M1/1‑57 (MQ=255) ccATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgg > 1:1157068‑M1/1‑53 (MQ=255) cGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgg > 2:3490320‑M1/1‑49 (MQ=255) cGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgg < 1:5055218‑M1/151‑103 (MQ=255) cGCTTGCTCGCCGGGCTGAACCCGCTAGGTTTCGAACTGTGCACATGGAcatgcacagggtttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaatatgtgggcgg > 2:1972637‑M1/1‑49 (MQ=255) cTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgggtcaaa > 2:4698484‑M1/1‑43 (MQ=255) tCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcaaaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgggtcaaac < 1:1964234‑M1/151‑110 (MQ=255) cGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgggtcaaaccgcc > 2:4737395‑M1/1‑38 (MQ=255) cTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgggtcaaaccgcccctt < 1:3341990‑M1/151‑118 (MQ=255) tGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgggtcaaaccgccccttt < 2:5126053‑M1/151‑119 (MQ=255) gAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgggtcaaaccgcccctttt > 1:5122722‑M1/1‑32 (MQ=255) aCCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgggtcaaaccgcccctttttt < 1:4613962‑M1/151‑122 (MQ=255) aCCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgggtcaaaccgcccctttttt < 2:122289‑M1/151‑122 (MQ=255) cccGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgggtcaaaccgccccttttttt > 2:3107091‑M1/1‑29 (MQ=255) cccGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgggtcaaaccgccccttttttt < 1:2791039‑M1/151‑123 (MQ=255) cccGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgggtcaaaccgccccttttttt < 1:4509234‑M1/151‑123 (MQ=255) ccGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgggtcaaaccgcccctttttttg < 2:4470552‑M1/151‑124 (MQ=255) cTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgggtcaaaccgcccctttttttgccc > 1:2164870‑M1/1‑25 (MQ=255) cTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgggtcaaaccgcccctttttttgccc > 2:3069830‑M1/1‑25 (MQ=255) tAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgggtcaaaccgcccctttttttgcccg > 1:3539969‑M1/1‑24 (MQ=255) tAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgggtcaaaccgcccctttttttgcccg > 2:2663171‑M1/1‑24 (MQ=255) gTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgggtcaaaccgcccctttttttgcccgta < 1:3791501‑M1/151‑130 (MQ=255) gTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgggtcaaaccgcccctttttttgcccgta < 1:1234223‑M1/151‑130 (MQ=255) ttCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgggtcaaaccgcccctttttttgcccgtagga < 1:850604‑M1/151‑133 (MQ=255) tCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgggtcaaaccgcccctttttttgcccgtaggaa > 1:4213538‑M1/1‑18 (MQ=255) tCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgggtcaaaccgcccctttttttgcccgtaggaa < 1:1000527‑M1/151‑134 (MQ=255) gAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgggtcaaaccgcccctttttttgcccgtaggaaaa > 1:1279233‑M1/1‑16 (MQ=255) aCTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgggtcaaaccgcccctttttttgcccgtaggaaaaca < 1:2389519‑M1/151‑138 (MQ=255) cTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgggtcaaaccgcccctttttttgcccgtaggaaaacaa > 2:1524986‑M1/1‑13 (MQ=255) aGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgggtcaaaccgcccctttttttgcccgtaggaaaacaaaaaaggcc > 1:2001304‑M1/1‑5 (MQ=255) aGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgggtcaaaccgcccctttttttgcccgtaggaaaacaaaaaaggcc > 2:1513825‑M1/1‑5 (MQ=255) aGGGAcatgcacaggctttcagaatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgggtcaaaccgcccctttttttgcccgtaggaaaacaaaaaaggcc < 1:2414219‑M1/151‑147 (MQ=255) tggATGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAGTGATTCCACGCTGATCCGGACACTCATTCCACGAGCATCCGGACACCGACTCCACGGTCATCCGGACACTTTTCTGGCAGGCAGCCACGCAGGATTTa > 1:3206342/2‑151 (MQ=14) gggAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgggtcaaaccgcccctttttttgcccgtaggaaaacaaaaaaggccc < 1:1038700‑M1/151‑148 (MQ=255) ggAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgggtcaaaccgcccctttttttgcccgtaggaaaacaaaaaaggcccc < 1:3629347‑M1/151‑149 (MQ=255) | ATCAAAGTCGTTTCCAAAGGCTGCATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGATGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAGTGATTCCACGCTGATCCGGACACTCATTCCACGAGCATCCGGACACCGACTCCACGGTCATCCGGACACTTTTCTGGCAGGCAGCCACGCAGGATTTAT > CP009974/3486622‑3486920 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |