Predicted mutation
evidence seq id position mutation annotation gene description
MC JC CP009974 1,508,761 Δ2,603 bp RPPX_06690RPPX_06695 RPPX_06690, RPPX_06695

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ CP009974 1508761–1511359 1511363 5–2603 254 [0] [0] 252 RPPX_06690–RPPX_06695 RPPX_06690,RPPX_06695

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009974 = 15087600 (0.000)236 (0.950) 151/284 0.3 100% intergenic (+932/‑204) RPPX_06680/RPPX_06690 membrane protein/integrase
?CP009974 1511364 = 0 (0.000)intergenic (+113/‑364) RPPX_06695/RPPX_06700 ATPase AAA/HxlR family transcriptional regulator

Only 100 of 252 total aligned reads displayed.

GGACGCAGAAATTGACGACGCCAGCCAACCCGGACTAACAATGCCACCCCTGCGTCGCTGCGCTCCGACTGCCTGTCCGAATGAGCGTGGAACAGGTGTCCGGATCAGCGTGGGCTGAGTGTCCGAATGGCGTGGAATCCGCACGCCGACCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAGCAACCCCAGGGCGTAGCCCGCCTGGGTCGCGCCGACTACCCAGCCAATCTGCTGCTGCGCCACCCCCA  >  CP009974/1511214‑1511512
                                                                                                                                                      |                                                                                                                                                    
ggtgacagtgcctaccgcctgcccttgctggccaggtgaggccaggctcgccgcatgagccaccatcacctgcaccatgactgccatcaaccctgtgatcgccagagccagcagcaatattgcccagttcggcgccatgccaacgccgacc                                                                                                                                                      <  1:3318567‑M2/1‑1 (MQ=255)
 gtgacagtgcctaccgcctgcccttgctggccaggtgaggccaggctcgccgcatgagccaccatcacctgcaccatgactgccatcaaccctgtgatcgccagagccagcagcaatattgcccagttcggcgccatgccaacgccgacCa                                                                                                                                                     <  1:2620522‑M2/2‑1 (MQ=255)
     cagtgcctaccgcctgcccttgctggccaggtgaggccaggctcgccgcatgagccaccatcacctgcaccatgactgccatcaaccctgtgatcgccagagccagcagcaatattgcccagttcggcgccatgccaacgccgacCAgcgc                                                                                                                                                 >  1:2825408‑M2/146‑151 (MQ=255)
       gtgcctaccgcctgcccttgctggccaggtgaggccaggctcgccgcatgagccaccatcacctgcaccatgactgccatcaaccctgtgatcgccagagccagcagcaatattgcccagttcggcgccatgccaacgccgacCAGCGCaa                                                                                                                                               <  1:1924460‑M2/8‑1 (MQ=255)
        tgcctaccgcctgcccttgctggccaggtgaggccaggctcgccgcatgagccaccatcacctgcaccatgactgccatcaaccctgtgatcgccagagccagcagcaatattgcccagttcggcgccatgccaacgccgacCAGCGCAAg                                                                                                                                              <  2:663851‑M2/9‑1 (MQ=255)
         gcctaccgcctgcccttgctggccaggtgaggccaggctcgccgcatgagccaccatcacctgcaccatgactgccatcaaccctgtgatcgccagagccagcagcaatattgcccagttcggcgccatgccaacgccgacCAGCGCAAgc                                                                                                                                             <  2:1068465‑M2/10‑1 (MQ=255)
         gcctaccgcctgcccttgctggccaggtgaggccaggctcgccgcatgagccaccatcacctgcaccatgactgccatcaaccctgtgatcgccagagccagcagcaatattgcccagttcggcgccatgccaacgccgacCAGCGCAAgc                                                                                                                                             >  2:1938741‑M2/142‑151 (MQ=255)
         gcctaccgcctgcccttgctggccaggtgaggccaggctcgccgcatgagccaccatcacctgcaccatgactgccatcaaccctgtgatcgccagagccagcagcaatattgcccagttcggcgccatgccaacgccgacCAGCGCAAgc                                                                                                                                             <  1:2155305‑M2/10‑1 (MQ=255)
           ctaccgcctgcccttgctggccaggtgaggccaggctcgccgcatgagccaccatcacctgcaccatgactgccatcaaccctgtgatcgccagagccagcagcaatattgcccagttcggcgccatgccaacgccgacCAGCGCAAgcgc                                                                                                                                           <  1:3045819‑M2/12‑1 (MQ=255)
            taccgcctgcccttgctggccaggtgaggccaggctcgccgcatgagccaccatcacctgcaccatgactgccatcaaccctgtgatcgccagagccagcagcaatattgcccagttcggcgccatgccaacgccgacCAGCGCAAGcgcc                                                                                                                                          <  1:3806733‑M2/13‑1 (MQ=255)
             accgcctgcccttgctggccaggtgaggccaggctcgccgcatgagccaccatcacctgcaccatgactgccatcaaccctgtgatcgccagagccagcagcaatattgcccagttcggcgccatgccaacgccgacCAGCGCAAGcgccg                                                                                                                                         >  1:2387251‑M2/138‑151 (MQ=255)
              ccgcctgcccttgctggccaggtgaggccaggctcgccgcatgagccaccatcacctgcaccatgactgccatcaaccctgtgatcgccagagccagcagcaatattgcccagttcggcgccatgccaacgccgacCAGCGCAAGcgccgc                                                                                                                                        >  1:4318148‑M2/137‑151 (MQ=255)
               cgcctgcccttgctggccaggtgaggccaggctcgccgcatgagccaccatcacctgcaccaggactgccatcaaccctgtgatcgccagagccagcagcaatattgcccagttcggcgccatgccaacgccgacCAACGCAAGCGCcgcg                                                                                                                                       >  2:2822390‑M2/136‑151 (MQ=255)
                    gcccttgctggccaggtgaggccaggctcgccgcatgagccaccatcacctgcaccatgactgccatcaaccctgtgatcgccagagccagcagcaatattgcccagttcggcgccatgccaacgccgacCAGCGCAAGCGCCGCGAACAg                                                                                                                                  >  1:2404859‑M2/131‑151 (MQ=255)
                      ccttgctggccaggtgaggccaggctcgccgcatgagccaccatcacctgcaccatgactgccatcaaccctgtgatcgccagagccagcagcaatattgcccagttcggcgccatgccaacgccgacCAGCGCAAGCGCCGCGAACAGCa                                                                                                                                >  1:1682799‑M2/129‑151 (MQ=255)
                      ccttgctggccaggtgaggccaggctcgccgcatgagccaccatcacctgcaccatgactgccatcaaccctgtgatcgccagagccagcagcaatattgcccagttcggcgccatgccaacgccgacCAGCGCAAGCGCCGCGAACAGCa                                                                                                                                >  1:1282705‑M2/129‑151 (MQ=255)
                       cttgctgcccaggtgaggccaggctcgccgcatgcgccaccatcacctgcaccatgactgccatcaaccctgtgatcgccagagccagcagcaatattgcccagttcggcgccatgccaacgccgacCAGCGCAAGCGCCGCGAACAGCaa                                                                                                                               <  2:4712821‑M2/24‑1 (MQ=255)
                         tgctggccaggtgaggccaggctcgccgcatgagccaccatcacctgcaccatgactgccatcaaccctgtgatcgccagagccagcagcaatattgcccagttcggcgccatgccaacgccgacCAGCGCAAGCGCCGCGAACAGCAACt                                                                                                                             <  1:4574758‑M2/26‑1 (MQ=255)
                         tgctggccaggtgaggccaggctcgccgcatgagccaccatcacctgcaccatgactgccatcaaccctgtgatcgccagagccagcagcaatattgcccagttcggcgccatgccaacgccgacCAGCGCAAGCGCCGCGAACAGCAACt                                                                                                                             <  1:4895537‑M2/26‑1 (MQ=255)
                          gcgggccaggtgaggcgaggctcgccgcatgagccaccatcacctgcaccatgactgccatcaaccctgtgatcgccagagcaagcagcaatattgcccagttcggcgccatgccaacgccgacCAGCGCAAGCGCCGCGAACAGCAACTg                                                                                                                            <  2:4786585‑M2/27‑1 (MQ=255)
                              gccaggtgaggccaggctcgccgcatgagccaccatcacctgcaccatgactgccatcaaccctgtgatcgccagagccagcagcaatattgcccagtccggcgccatgccaccgccgacCAGCGCAAGCCCCGCGCACACCACCTGgccc                                                                                                                        >  2:4623968‑M2/121‑150 (MQ=255)
                               ctagggtaggccaggctcgccgcatgcgccaccatcacctgcaccatgactgccatcaaccctgtgatcgccagagccagcagcaatattgcccagttcggcgccatgccaacgccgacCAGCGCAAGCGCCGCGAACAGCAACTGGCCaa                                                                                                                       <  2:1841561‑M2/32‑1 (MQ=255)
                                 aggtgaggccaggctcgccgcatgagccaccatcacctgcaccatgactgccatcaaccctgtgatcgccagagccagcagcaatattgcccagttcggcgccatgccaacgccgacCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGc                                                                                                                     <  2:4244497‑M2/34‑1 (MQ=255)
                                      aggccaggctcgccgcatgagccaccatcacctgcaccatgactgccatcaaccctgtgatcgccagagccagcagcaatattgcccagttcggcgccatgccaacgccgacCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAg                                                                                                                >  1:1072204‑M2/113‑151 (MQ=255)
                                      aggccaggctcgccgcatgagccaccatcacctgcaccatgactgccatcaaccctgtgatcgccagagccagcagcaatattgcccagttcggcgccatgccaacgccgacCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAg                                                                                                                <  2:2404859‑M2/39‑1 (MQ=255)
                                       ggccaggctcgccgcatgagccaccatcacctgcaccatgactgccatcaaccctgtgatcgccagagccagcagcaatattgcccagttcggcgccatgccaacgccgacCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGa                                                                                                               >  2:1999665‑M2/112‑151 (MQ=255)
                                        gccaggctggccgaatgagccaccgtcacctgcacgatgactgccatcacccctgtgatcgccagagcctgcagcaatattgcccagttcggcgccatgccaacgccgacCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGAc                                                                                                              <  2:3114861‑M2/41‑1 (MQ=255)
                                        gccaggctcgccgcatgagccaccatcccctgcaccatgactgccatcacccctgtgatcgccagagccagcagcaatattgcccagttcggcgccatgccaacgccgacCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGAc                                                                                                              <  2:1607521‑M2/41‑1 (MQ=255)
                                          caggctcgccgcatgagccaccatcacctgcaccatgactgccatcaaccctgtgatcgccagagccagcagcaatattgcccagttcggcgccatgccaacgccgacCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGt                                                                                                            <  2:247417‑M2/43‑1 (MQ=255)
                                           aggctcgccgcatgagccaccatcacctgcaccatgactgccatcaaccctgtgatcgccagagccagcagcaatattgcccagttcggcgccatgccaacgccgacCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGtt                                                                                                           <  1:592019‑M2/44‑1 (MQ=255)
                                           aggctcgccgcatgagccaccatcacctgcaccatgactgccatcaaccctgtgatcgccagagccagcagcaatattgcccagttcggcgccatgccaacgccgacCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGtt                                                                                                           <  1:4064240‑M2/44‑1 (MQ=255)
                                            ggctcgccgcatgagccaccatcacctgcaccatgactgccatcaaccctgtgatcgccagagccagcagcaatattgcccagttcggcgccatgccaacgccgacCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGttt                                                                                                          <  1:1560060‑M2/45‑1 (MQ=255)
                                             gctcgccgcatgagccaccatcacctgcaccatgactgccatcaaccctgtgatcgccagagccagcagcaatattgcccagttcggcgccatgccaacgccgacCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTa                                                                                                         <  1:3559356‑M2/46‑1 (MQ=255)
                                                 gccgcatgagccaccatcacctgcaccatgactgccatcaaccctgtgatcgccagagccagcagcaatattgcccagttcggcgccatgccaacgccgacCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGt                                                                                                     <  1:3386787‑M2/50‑1 (MQ=255)
                                                  ccgcatgagccaccatcacctgcaccatgactgccatcaaccctgtgatcgccagagccagcagcaatattgcccagttcggcgccatgccaacgccgacCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTc                                                                                                    <  1:1656584‑M2/51‑1 (MQ=255)
                                                  ccgcatgagcaaccatcacctgcaccatgactgccattaaccctgtgatcgccagagccagcagcaatattgctcagttcggcgccatgccaatgccgacCAGCGCAAGCGTCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTc                                                                                                    >  1:2304878‑M2/101‑151 (MQ=255)
                                                   cgcatgagccaccatcacctgcaccatgactgccatcaaccctgtgatcgccagagccagcagcaatattgcccagttcggcgccatgccaacgccgacCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGtcc                                                                                                   >  2:1665517‑M2/100‑150 (MQ=255)
                                                    gcatgagccaccatcacctgcaccatgactgccatcaaccctgtgatcgccagagccagcagcaatattgcccagttcggcgccatgccaacgccgacCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGa                                                                                                  >  1:4019343‑M2/99‑151 (MQ=255)
                                                     catgagccaccatcacctgcaccatgactgccatcaaccctgtgatcgccagagccagcagcaatattgcccagttcggcgccatgccaacgccgacCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGAc                                                                                                 >  2:4510134‑M2/98‑151 (MQ=255)
                                                      atgagccaccatcacctgcaccatgactgccatcaaccctgtgatcgccagagccagcagcaatattgcccagttcggcgccatgccaacgccgacCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGAcc                                                                                                >  2:2332052‑M2/97‑151 (MQ=255)
                                                       tgagccaccatcacctgcaccatgactgccatcaaccctgtgatcgccagagccagcagcaatattgcccagttcggcgccatgccaacgccgacCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCa                                                                                               >  2:294795‑M2/96‑151 (MQ=255)
                                                        gagccaccatcacctgcaccatgactgccatcaaccctgtgatcgccagagccagcagcaatattgcccagttcggcgccatgccaacgccgacCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCaa                                                                                              <  1:14883‑M2/57‑1 (MQ=255)
                                                             accatcacctgcaccatgactgccatcaaccctgtgatcgccagagccagcagcaatattgcccagttcggcgccatgccaacgccgacCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTccc                                                                                         >  2:4940048‑M2/90‑151 (MQ=255)
                                                                     ctgcaccatgactgccatcaaccctgtgatcgccagagccagcagcaatattgcccagttcggcgccatgccaacgccgacCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGc                                                                                 >  1:4837180‑M2/82‑151 (MQ=255)
                                                                      tgcaccatgactgccatcaaccctgtgatcgccagagccagcagcaatattgcccagttcggcgccatgccaacgccgacCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGc                                                                                    >  1:908222‑M2/81‑147 (MQ=255)
                                                                       gcaccatgactgccatcaaccctgtgatcgccagagccagcagcaatattgcccagttcggcgccatgccaacgccgacCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGcac                                                                               >  2:4888008‑M2/80‑151 (MQ=255)
                                                                           catgactgccatcaaccctgtgatcgccagagccagcagcaatattgcccagttcggcgccatgccaacgccgacCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATc                                                                           >  1:2060910‑M2/76‑151 (MQ=255)
                                                                             ggactgccatcaaccctgtgatcgccagagccagcagcaatattgcccagttcggcgccatgccaacgccgacCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAg                                                                         <  2:3594850‑M2/78‑1 (MQ=255)
                                                                               actgccatcaaccctgtgatcgccagagccagcagcaatattgcccagttcggcgccatgccaacgccgacCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTa                                                                       >  1:3742078‑M2/72‑151 (MQ=255)
                                                                               actgccatcaaccctgtgatcgccagagccagcagcaatattgcccagttcggcgccatgccaacgccgacCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTa                                                                       <  1:3508167‑M2/80‑1 (MQ=255)
                                                                                ctgccatcaaccctgtgatcgccagagccagcagcaatattgcccagttcggcgccatgccaacgccgacCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAg                                                                      >  1:1575495‑M2/71‑151 (MQ=255)
                                                                                 tgccatcaaccctgtgatcgccagagccagcagcaatattgcccagttcggcgccatgccaacgccgacCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAGc                                                                     <  2:1768323‑M2/82‑1 (MQ=255)
                                                                                  gccatcaaccctgtgatcgccagagccagcagcaatattgcccaggtcggcgccatgccaacgccgacCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAGCa                                                                    <  2:3762513‑M2/83‑1 (MQ=255)
                                                                                   ccatcaaccctgtgatcgccagagccagcagcaatattgcccagttcggcgccatgccaacgccgacCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAGCaa                                                                   <  1:4239665‑M2/84‑1 (MQ=255)
                                                                                   ccatcaaccctgtgatcgccagagccagcagcaatattgcccagttcggcgccatgccaacgccgacCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAGCaa                                                                   >  1:872920‑M2/68‑151 (MQ=255)
                                                                                   ccatcaaccctgtgatcgccagagccagcagcaatattgcccagttcggcgccatgccaacgccgacCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAGCaa                                                                   >  2:4663406‑M2/68‑151 (MQ=255)
                                                                                        aaccctgtgatcgccagagccagcagcaatattgcccagttcggcgccatgccaacgccgacCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAGCAACCCCa                                                              >  1:558608‑M2/63‑151 (MQ=255)
                                                                                          ccctgtgatcgccagagccagcagcaatattgcccagttcggcgccatgccaacgccgacCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAGCAACCCCAgg                                                            <  1:4481273‑M2/91‑1 (MQ=255)
                                                                                          ccctgtgatcgccagagccagcagcaatattgcccagttcggcgccatgccaacgccgacCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAGCAACCCCAgg                                                            >  2:2455399‑M2/61‑151 (MQ=255)
                                                                                           cctgtgatcgccagagccagcagcaatattgcccagttcggcgccatgccaacgccgacCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAGCAACCCCAggg                                                           >  2:755027‑M2/60‑151 (MQ=255)
                                                                                              gtgatcgccagagccagcagcaatattgcccagttcggcgccatgccaacgccgacCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAGCAACCCCAGGGCGt                                                        <  1:1634344‑M2/95‑1 (MQ=255)
                                                                                                gatcgccagagccagcagcaatattgcccagttcggcgccatgccaacgccgacCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAGCAACCCCAGGGCGTAg                                                      >  1:316412‑M2/55‑151 (MQ=255)
                                                                                                 atcgccagagccagcagcaatattgcccagttcggcgccatgccaacgccgacCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAGCAACCCCAGGGCGTAGc                                                     >  1:1014080‑M2/54‑151 (MQ=255)
                                                                                                      cagagccagcagcaatattgcccagttcggcgccatgccaacgccgacCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAGCAACCCCAGGGCGTAGCCCGcc                                                >  2:4452091‑M2/49‑151 (MQ=255)
                                                                                                      cagagccagcagcaatattgcccagttcggcgccatgccaacgccgacCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAGCAACCCCAGGGCGTAGCCCGcc                                                >  1:321167‑M2/49‑151 (MQ=255)
                                                                                                         agccagcagcaatattgcccagttcggcgccatgccaacgccgacCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAGCAACCCCAGGGCGTAGCCCGcc                                                <  2:1006207‑M2/103‑1 (MQ=255)
                                                                                                         agccagcagcaatattgcccagttcggcgccatgccaacgccgacCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAGCAACCCCAGGGCGTAGCCCGcc                                                >  1:1006207‑M2/46‑148 (MQ=255)
                                                                                                           ccagcagcaatattgcccagttcggcgccatgccaacgccgacCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAGCAACCCCAGGGCGTAGCCCGCCTGGGt                                           <  2:1870061‑M2/108‑1 (MQ=255)
                                                                                                            cagcagcaatattgcccagttcggcgccatgccaccgccgacCAGCGGAAGCGCCGCGTACAGCCACCGGCCAAGCAACAGACGCTTACGGGCGACCAAGTCCCGGGGCGGCACAAGCAGCAGCAACCCCAGCGCGTAGCCCGCCTGGGTc                                          >  2:3245694‑M2/43‑151 (MQ=255)
                                                                                                            cagcagcaatattgcccagttcggcgccatgccaacgccgacCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAGCAACCCCAGGGCGTAGCCCGCCTGGGTc                                          <  1:664628‑M2/109‑1 (MQ=255)
                                                                                                             agcagcaatattgcccagttcggcgccatgccaacgccgacCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAGCAACCCCAGGGCGTAGCCCGCCTGGGTcg                                         <  2:2170379‑M2/110‑1 (MQ=255)
                                                                                                              gcagcaatattgcccagttcggcgccatgccaacgccgacCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAGCAACCCCAGGGCGTAGCCCGCCTGGGTcgc                                        <  1:2492146‑M2/111‑1 (MQ=255)
                                                                                                              gcagcaatattgcccagttcggcgccatgccaacgccgacCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAGCAACCCCAGGGCGTAGCCCGCCTGGGTcgc                                        >  1:4981522‑M2/41‑151 (MQ=255)
                                                                                                                agcaatattgcccagttcggcgccatgccaacgccgacCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAGCAACCCCAGGGCGTAGCCCGCCTGGGTCgcgc                                      >  2:5126054‑M2/39‑151 (MQ=255)
                                                                                                                  cagtattggccggttcggcgcgatgccaacgccgacCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAGCAACCCCAGGGCGTAGCCCGCCTGGGTCGCGCCg                                    <  2:931191‑M2/115‑1 (MQ=255)
                                                                                                                   aatattgcccagttcggcgccatgccaacgccgacCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAGCAACCCCAGGGCGTAGCCCGCCTGGGTCGCGCCGa                                   >  2:2375029‑M2/36‑151 (MQ=255)
                                                                                                                    atattgcccagttcggcgccatgccaacgccgacCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAGCAACCCCAGGGCGTAGCCCGCCTGGGTCGCGCCGAc                                  >  1:4361977‑M2/35‑151 (MQ=255)
                                                                                                                    atattgcccagttcggcgccatgccaacgccgacCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAGCAACCCCAGGGCGTAGCCCGCCTGGGTCGCGCCGAc                                  <  2:3896631‑M2/117‑1 (MQ=255)
                                                                                                                      attgcccagttcggcgccatgccaacgccgacCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAGCAACCCCAGGGCGTAGCCCGCCTGGGTCGCGCCGACTa                                >  1:5087555‑M2/33‑151 (MQ=255)
                                                                                                                           ccagttcggcgccatgccaacgccgacCAGCGCAAGCGCCGCTAACATCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGACCCCGAGCGGCACAATCAGTAGCAACCCCAGGGCGTAGCCCGCCTGGGTCGCGCCGACTACCCAg                           <  1:2500857‑M2/124‑1 (MQ=255)
                                                                                                                           ccagctcgccggcatggcaacgccgacCAGCGCGCGCGCCGCGAACAGCACGTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGGGCGGCACAATCAGTAGCAACTCCAGGGCGGTGCCCTCCTGGGTCGCGCCGACTACCCAg                           <  2:4073358‑M2/124‑1 (MQ=255)
                                                                                                                            cagttcggcgccatgccaacgccgacCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAGCAACCCCAGGGCGTAGCCCGCCTGGGTCGCGCCGACTACCCAGc                          >  1:150429‑M2/27‑151 (MQ=255)
                                                                                                                            cagttcggcgccatgccaacgccgacCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAGCAACCCCAGGGCGTAGCCCGCCTGGGTCGCGCCGACTACCCAGc                          <  2:500421‑M2/125‑1 (MQ=255)
                                                                                                                              gttcggcgccatgccaacgccgacCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAGCAACCCCAGGGCGTAGCCCGCCTGGGTCGCGCCGACTACCCAGCCa                        <  1:4391687‑M2/127‑1 (MQ=255)
                                                                                                                               ttcggcgccatgccaacgccgacCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAGCAACCCCAGGGCGTAGCCCGCCTGGGTCGCGCCGACTACCCAGCCaa                       <  2:4361977‑M2/128‑1 (MQ=255)
                                                                                                                               ttcggcgccatgccaacgccgacCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAGCAACCCCAGGGCGTAGCCCGCCTGGGTCGCGCCGACTACCCAGCCaa                       <  2:528919‑M2/128‑1 (MQ=255)
                                                                                                                                tcggcgccatgccaacgccgacCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAGCAACCCCAGGGCGTCGCCCGCCACGGTCGCGCCGACTACCCAGccaca                      >  2:5179024‑M2/23‑149 (MQ=255)
                                                                                                                                  ggcgccatgccaacgccgacCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAGCAACCCCAGGGCGTAGCCCGCCTGGGTCGCGCCGACTACCCAGCCAATct                    <  2:1456744‑M2/131‑1 (MQ=255)
                                                                                                                                    cgccatgccaacgccgacCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAGCAACCCCAGGGCGTAGCCCGCCTGGGTCGCGCCGACTACCCAGCCAATctgc                  <  1:2332052‑M2/133‑1 (MQ=255)
                                                                                                                                      ccatgcaaacgccgacCAGCGCAAGCGCCGCGAACAGCAACTCGCCAAGACACAGAAGTTTACGGTCGACCAAGTCCCCGAGAGGCACAATCAGTAGCAACCCCAGGGAGTAGCCCGCCTGGGACGCGCCGACTACCCAGCCAATctgctg                <  2:1254092‑M2/135‑1 (MQ=255)
                                                                                                                                            caacgccgacCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAGCAACCCCAGGGCGTAGCCCGCCTGGGTCGCGCCGACTACCCAGCCAATCTGCTGCTgcgc          >  2:1486119‑M2/11‑151 (MQ=255)
                                                                                                                                            caacgccgacCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAGCAACCCCAGGGCGTAGCCCGCCTGGGTCGCGCCGACTACCCAGCCAATCTGCTGCTgcgc          >  1:1006783‑M2/11‑151 (MQ=255)
                                                                                                                                             aacgccgacCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAGCAACCCCAGGGCGTAGCCCGCCTGGGTCGCGCCGACTACCCAGCCACTCTGCTGCTGCGcc         >  2:3742790‑M2/10‑151 (MQ=255)
                                                                                                                                             aacgccgacCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAGCAACCCCAGGGCGTAGCCCGCCTGGGTCGCGCCGACTACCCAGCCAATCTGCTGCTGCGcc         >  2:2610499‑M2/10‑151 (MQ=255)
                                                                                                                                                gccgacCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAGCAACCCCAGGGCGTAGCCCGCCTGGGTCGCGCCGACTACCCAGCCAACCCGCTGCTGCGCCAcc      >  2:3620586‑M2/7‑151 (MQ=255)
                                                                                                                                                 ccgacCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAGCAACCCCAGGGCGTAGCCCGCCTGGGTCGCGCCGACTACCCAGCCAATCTGCTGCTGCGCCAccc     >  1:1448039‑M2/6‑151 (MQ=255)
                                                                                                                                                  cgacCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAGCAACCCCAGGGCGTAGCCCGCCTGGGTCGCGCCGACTACCCAGCCAATCTGCTGCTGCGCCAcccc    >  1:2126655‑M2/5‑151 (MQ=255)
                                                                                                                                                  cgacCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAGCAACCCCAGGGCGTAGCCCGCCTGGGTCGCGCCGACTACCCAGCCAATCTGCTGCTGCGCCAcccc    >  2:1468604‑M2/5‑151 (MQ=255)
                                                                                                                                                   gacCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAGCAACCCCAGGGCGTAGCCCGCCTGGGTCGCGCCGACTACCCAGCCAATCTGCTGCTGCGCCAccccc   <  2:126746‑M2/148‑1 (MQ=255)
                                                                                                                                                    acCAGCGCACGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAGCAACCCCAGGGCGTAGCCCGCCTGGGTCGCGCCGACTACCCAGCCAAGCTGCTGCTCCGCCACCCCCa  >  1:185597‑M2/3‑151 (MQ=255)
                                                                                                                                                      |                                                                                                                                                    
GGACGCAGAAATTGACGACGCCAGCCAACCCGGACTAACAATGCCACCCCTGCGTCGCTGCGCTCCGACTGCCTGTCCGAATGAGCGTGGAACAGGTGTCCGGATCAGCGTGGGCTGAGTGTCCGAATGGCGTGGAATCCGCACGCCGACCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAGCAACCCCAGGGCGTAGCCCGCCTGGGTCGCGCCGACTACCCAGCCAATCTGCTGCTGCGCCACCCCCA  >  CP009974/1511214‑1511512

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.