BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	CP009974	1,508,761	Δ2,603 bp		RPPX_06690–RPPX_06695	RPPX_06690, RPPX_06695

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	CP009974	1508761–1511359	1511363	5–2603	254 [0]	[0] 252	RPPX_06690–RPPX_06695	RPPX_06690,RPPX_06695

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009974	= 1508760	0 (0.000)	236 (0.950)	151/284	0.3	100%	intergenic (+932/‑204)	RPPX_06680/RPPX_06690	membrane protein/integrase
*	?	CP009974	1511364 =	0 (0.000)	236 (0.950)	151/284	0.3	100%	intergenic (+113/‑364)	RPPX_06695/RPPX_06700	ATPase AAA/HxlR family transcriptional regulator

Only 100 of 254 total aligned reads displayed.

TGGTGACAGTGCCTACCGCCTGCCCTTGCTGGCCAGGTGAGGCCAGGCTCGCCGCATGAGCCACCATCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAGTGATTCCACGCTGATCCGGACACTCATTCCACGAGCATCCGGACACCGACTCCACGGTCATCCGGACACTTTTCTGGCAGGCAGCCACGCAGGATTTATT  >  CP009974/1508610‑1508909

tGGTGACAGTGCCTACCGCCTGCCCTTGCTGGCCAGGTGAGGCCAGGCTCGCCGCATGAGCCGCCATCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGAC                                                                                                                                                       <  1:2350055‑M1/151‑1 (MQ=255)

   tGACAGTGCCTACCGCCTGCCCTTGCTGGCCAGGTGAGGCCAGGCTCGCCGCATGAGCCACCATCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACcag                                                                                                                                                    >  1:3517264‑M1/1‑148 (MQ=255)

        gTGCCTACCGCCTGCCCTTGCTGGCCAGGTGAGGCCAGGCTCGCCGCATGAGCCACCATCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACcagcgcaa                                                                                                                                               <  1:1924460‑M1/151‑9 (MQ=255)

         tGCCTACCGCCTGCCCTTGCTGGCCAGGTGAGGCCAGGCTCGCCGCATGAGCCACCATCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACcagcgcaag                                                                                                                                              <  2:663851‑M1/151‑10 (MQ=255)

          gCCTACCGCCTGCCCTTGCTGGCCAGGTGAGGCCAGGCTCGCCGCATGAGCCACCATCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACcagcgcaagc                                                                                                                                             <  1:41508‑M1/151‑11 (MQ=255)

           ccTACCGCCTGCCCTTGCTGGCCAGGTGAGGCCAGGCTCGCCGCATGAGCCACCATCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACcagcgcaagcg                                                                                                                                            <  1:4727894‑M1/151‑12 (MQ=255)

            cTACCGCCTGCCCTTGCTGGCCAGGTGAGGCCAGGCTCGCCGCATGAGCCACCATCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACcagcgcaagcgc                                                                                                                                           <  1:3045819‑M1/151‑13 (MQ=255)

                cGCCTGCCCTTGCTGGCCAGGTGAGGCCAGGCTCGCCGCATGAGCCACCATCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACcagcgcaagcgccgcg                                                                                                                                       >  1:1870580‑M1/1‑135 (MQ=255)

                cGCCTGCCCTTGCTGGCCAGGTGAGGCCAGGCTCGCCGCATGAGCCACCATCACCTGCACCAGGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACcaacgcaagcgccgcg                                                                                                                                       >  2:2822390‑M1/1‑135 (MQ=255)

                  ccTGCCCTTGCTGGCCAGGTGAGGCCAGGCTCGCCGCATGAGCCACCATCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACcagcgcaagcgccgcgaa                                                                                                                                     >  1:4855309‑M1/1‑133 (MQ=255)

                     gCCCTTGCTGGCCAGGTGAGGCCAGGCTCGCCGCATGAGCCACCATCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACcagcgcaagcgccgcgaacag                                                                                                                                  >  1:2404859‑M1/1‑130 (MQ=255)

                       ccTTGCTGGCCAGGTGAGGCCAGGCTCGCCGCATGAGCCACCATCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACcagcgcaagcgccgcgaacagca                                                                                                                                >  1:1682799‑M1/1‑128 (MQ=255)

                       ccTTGCTGGCCAGGTGAGGCCAGGCTCGCCGCATGAGCCACCATCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACcagcgcaagcgccgcgaacagca                                                                                                                                >  1:1282705‑M1/1‑128 (MQ=255)

                        cTTGCTGGCCAGGTGAGGCCAGGCTCGCCGCATGAGCCACCATCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACcagcgcaagcgccgcgaacagcaa                                                                                                                               <  1:3371334‑M1/151‑25 (MQ=255)

                        cTTGCTGCCCAGGTGAGGCCAGGCTCGCCGCATGCGCCACCATCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACcagcgcaagcgccgcgaacagcaa                                                                                                                               <  2:4712821‑M1/151‑25 (MQ=255)

                         ttGCTGGCCAGGTGAGGCCAGGCTCGCCGCATGAGCCACCATCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCACCGCCGACcagcgcaagcgccgcgaacagcaac                                                                                                                              >  2:3068360‑M1/1‑126 (MQ=255)

                           gcgggccaGGTGAGGCGAGGCTCGCCGCATGAGCCACCATCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCAAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACcagcgcaagcgccgcgaacagcaactg                                                                                                                            <  2:4786585‑M1/148‑28 (MQ=255)

                             tGGCCAGGTGAGGCCAGGCTCGCCGCATGAGCCACCATCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACcagcgcaagcgccgcgaacagcaactggc                                                                                                                          >  2:3804222‑M1/1‑122 (MQ=255)

                                  aGGTGAGGCCAGGCTCGCCGCATGAGCCACCATCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACcagcgcaagcgccgcgaacagcaactggccaagc                                                                                                                     <  1:900340‑M1/151‑35 (MQ=255)

                                      gAGGCCAGGCTCGCCGCATGAGCCACCATCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACcagcgcaagcgccgcgaacagcaactggccaagcaaca                                                                                                                 >  1:436682‑M1/1‑113 (MQ=255)

                                       aGGCCAGGCTCGCCGCATGAGCCACCATCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACcagcgcaagcgccgcgaacagcaactggccaagcaacag                                                                                                                <  1:3794706‑M1/151‑40 (MQ=255)

                                       aGGCCAGGCTCGCCGCATGAGCCACCATCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACcagcgcaagcgccgcgaacagcaactggccaagcaacag                                                                                                                <  2:2404859‑M1/151‑40 (MQ=255)

                                       aGGCCAGGCTCGCCGCATGAGCCACCATCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACcagcgcaagcgccgcgaacagcaactggccaagcaacag                                                                                                                >  1:1072204‑M1/1‑112 (MQ=255)

                                        ggCCAGGCTCGCCGCATGAGCCACCATCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACcagcgcaagcgccgcgaacagcaactggccaagcaacaga                                                                                                               >  2:1999665‑M1/1‑111 (MQ=255)

                                           cAGGCTCGCCGCATGAGCCACCATCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACcagcgcaagcgccgcgaacagcaactggccaagcaacagacgt                                                                                                            <  2:247417‑M1/151‑44 (MQ=255)

                                             ggCTCGCCGCATGAGCCACCATCACCTGCACCATGACTGCGATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACcagcgcaagcgccgcgaacagcaactggccaagcaacagacgttt                                                                                                          <  2:143064‑M1/151‑46 (MQ=255)

                                             ggCTCGCCGCATGAGCCACCATCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACcagcgcaagcgccgcgaacagcaactggccaagcaacagacgttt                                                                                                          <  1:1560060‑M1/151‑46 (MQ=255)

                                                  gccgcATGAGCCACCATCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACcagcgcaagcgccgcgaacagcaactggccacgcaacagacgtttacggc                                                                                                     >  2:1778911‑M1/1‑101 (MQ=255)

                                                  gccgcATGAGCCACCATCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACcagcgcaagcgccgcgaacagcaactggccaagcaacagacgtttacggt                                                                                                     >  2:1910081‑M1/1‑101 (MQ=255)

                                                   ccgcATGAGCCACCATCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACcagcgcaagcgccgcgaacagcaactggccaagcaacagacgtttacggtc                                                                                                    <  1:1656584‑M1/151‑52 (MQ=255)

                                                   ccgcATGAGCAACCATCACCTGCACCATGACTGCCATTAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCTCAGTTCGGCGCCATGCCAATGCCGACcagcgcaagcgtcgcgaacagcaactggccaagcaacagacgtttacggtc                                                                                                    >  1:2304878‑M1/1‑100 (MQ=255)

                                                      cATGAGCCACCATCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACcagcgcaagcgccgcgaacagcaactggccaagcaacagacgtttacggtcgac                                                                                                 >  2:4510134‑M1/1‑97 (MQ=255)

                                                      cATGAGCCACCATCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACcagcgcaagcgccgcgaacagcaactggccaagcaacagacgtttacggtcgac                                                                                                 >  2:2062144‑M1/1‑97 (MQ=255)

                                                       aTGAGCCACCATCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACcagcgcaagcgccgcgaacagcaactggccaagcaacagacgtttacggtcgacc                                                                                                >  2:2332052‑M1/1‑96 (MQ=255)

                                                        tGAGCCACCATCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACcagcgcaagcgccgcgaacagcaactggccaagcaacagacgtttacggtcgacca                                                                                               >  1:2228572‑M1/1‑95 (MQ=255)

                                                         gAGCCACCATCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACcagcgcaagcgccgcgaacagcaactggccaagcaacagacgtttacggtcgaccaa                                                                                              <  1:14883‑M1/151‑58 (MQ=255)

                                                             caccaTCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACcagcgcaagcgccgcgaacagcaactggccaagcaacagacgtttacggtcgaccaagtcc                                                                                          <  2:2373237‑M1/151‑62 (MQ=255)

                                                              accaTCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACcagcgcaagcgccgcgaacagcaactggccaagcaacagacgtttacggtcgaccaagtccc                                                                                         >  2:4940048‑M1/1‑89 (MQ=255)

                                                                 aTCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACcagcgcaagcgccgcgaacagcaactggccaagcaacagacgtttacggtcgaccaagtccccga                                                                                      >  2:1017305‑M1/1‑86 (MQ=255)

                                                                  tCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACcagcgcaagcgccgcgaacagcaactggccaagcaacagacgtttacggtcgaccaagtccccgag                                                                                     <  1:965372‑M1/151‑67 (MQ=255)

                                                                       tGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACcagcgcaagcgccgcgaacagcaactggccaagcaacagacgtttacggtcgaccaagtccccgagcggcc                                                                                >  2:4162463‑M1/1‑80 (MQ=255)

                                                                        gCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACcagcgcaagcgccgcgaacagcaactggccaagcaacagacgtttacggtcgaccaagtccccgagcggcac                                                                               >  2:4888008‑M1/1‑79 (MQ=255)

                                                                         cACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACcagcgcaagcgccgcgaacagcaactggccaagcaacagacgtttacggtcgaccaagtccccgagcggcaca                                                                              >  2:2928335‑M1/1‑78 (MQ=255)

                                                                           ccATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACcagcgcaagcgccgcgaacagcaactggccaagcaacagacgtttacggtcgaccaagtccccgagcggcacaat                                                                            >  1:3842655‑M1/1‑76 (MQ=255)

                                                                                 cTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACcagcgcaagcgccgcgaacagcaactggccaagcaacagacgtttacggtcgaccaagtccccgagcggcacaatcagtag                                                                      >  1:1575495‑M1/1‑70 (MQ=255)

                                                                                   gCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGGTCGGCGCCATGCCAACGCCGACcagcgcaagcgccgcgaacagcaactggccaagcaacagacgtttacggtcgaccaagtccccgagcggcacaatcagtagca                                                                    <  2:3762513‑M1/151‑84 (MQ=255)

                                                                                    ccATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACcagcgcaagcgccgcgaacagcaactggccaagcaacagacgtttacggtcgaccaagtccccgagcggcacaatcagtagcaa                                                                   >  2:4663406‑M1/1‑67 (MQ=255)

                                                                                       tCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACcagcgcaagcgccgcgaacagcaactggccaagcaacagacgtttacggtcgaccaagtccccgagcggcacaagcagtagcaaccc                                                                >  2:1629810‑M1/1‑64 (MQ=255)

                                                                                         aaCCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACcagcgcaagcgccgcgaacagcaactggccaagcaacagacgtttacggtcgaccaagtccccgagcggcacaatcagtagcaacccca                                                              >  1:3561051‑M1/1‑62 (MQ=255)

                                                                                            ccTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACcagcgcaagcgccgcgaacagcaactggccaagcaacagacgtttacggtcgaccaagtccccgagcggcacaatcagtagcaaccccaggg                                                           >  2:755027‑M1/1‑59 (MQ=255)

                                                                                             cTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACcagcgcaagcgccgcgaacagcaactggccaagcaacagacgtttacggtcgaccaagtccccgagcggcacaatcagtagcaaccccagggc                                                          >  1:2118180‑M1/1‑58 (MQ=255)

                                                                                               gtgATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACcagcgcaagcgccgcgaacagcaactggccaagcaacagacgtttacggtcgaccaagtccccgagcggcacaatcagtagcaaccccagggcgt                                                        <  1:1634344‑M1/151‑96 (MQ=255)

                                                                                                 gATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACcagcgcaagcgccgcgaacagcaactggccaagcaacagacgtttacggtcgaccaagtccccgagcggcacaatcagtagcaaccccagggcgtag                                                      >  2:2483058‑M1/1‑54 (MQ=255)

                                                                                                  aTCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACcagcgcaagcgccgcgaacagcaactggccaagcaacagacgtttacggtcgaccaagtccccgagcggcacaatcagtagcaaccccagggcgtagc                                                     >  2:3740454‑M1/1‑53 (MQ=255)

                                                                                                  aTCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACcagcgcaagcgccgcgaacagcaactggccaagcaacagacgtttacggtcgaccaagtccccgagcggcacaatcagtagcaaccccagggcgtagc                                                     >  1:1014080‑M1/1‑53 (MQ=255)

                                                                                                       cAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACcagcgcaagcgccgcgaacagcaactggccaagcaacagacgtttacggtcgaccaagtccccgagcggcacaatcagtagcaaccccagggcgtagcccgcc                                                >  1:2384206‑M1/1‑48 (MQ=255)

                                                                                                       cAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACcagcgcaagcgccgcgaacagcaactggccaagcaacagacgtttacggtcgaccaagtccccgagcggcacaatcagtagcaacaccagggcgtagcccgcc                                                >  2:1759181‑M1/1‑48 (MQ=255)

                                                                                                         gagCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACcagcgcaagcgccgcgaacagcaactggccaagcaacagacgtttacggtcgaccaagtccccgagcggcacaatcagtagcaaccccagggcgtagcccgcctg                                              >  2:1489683‑M1/1‑46 (MQ=255)

                                                                                                          agCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACcagcgcaagcgccgcgaacagcaactggccaagcaacagacgtttacggtcgaccaagtccccgagcggcacaatcagtagcaaccccagggcgtagcccgcc                                                >  1:1006207‑M1/1‑45 (MQ=255)

                                                                                                            ccAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACcagcgcaagcgccgcgaacagcaactggccaagcaacagacgtttacggtcgaccaagtccccgagcggcacaatcagtagcaaccccagggcgtagcccgcctgggt                                           >  1:871327‑M1/1‑43 (MQ=255)

                                                                                                            ccAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACcagcgcaagcgccgcgaacagcaactggccaagcaacagacgtttacggtcgaccaagtccccgagcggcacaatcagtagcaaccccagggcgtagcccgcctgggt                                           <  2:1870061‑M1/151‑109 (MQ=255)

                                                                                                             cagcagCAATATTGCCCAGTTCGGCGCCATGCCACCGCCGACcagcggaagcgccgcgtacagccaccggccaagcaacagacgcttacgggcgaccaagtcccggggcggcacaagcagcagcaaccccagcgcgtagcccgcctgggtc                                          >  2:3245694‑M1/1‑42 (MQ=255)

                                                                                                             cagcagCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACcagcgcaagcgccgcgaacagcaactggccaagcaacagacgtttacggtcgaccaagtccccgagcggcacaatcagtagcaaccccagggcgtagcccgcctgggtc                                          <  2:3517264‑M1/151‑110 (MQ=255)

                                                                                                              agcagcAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACcagcgcaagcgccgcgaacagcaactggccaagcaacagacgtttacggtcgaccaagtccccgagcggcacaatcagtagcaaccccagggcgtagcccgcctgggtcg                                         <  1:2823025‑M1/151‑111 (MQ=255)

                                                                                                              agcagcAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACcagcgcaagcgccgcgaacagcaactggccaagcaacagacgtttacggtcgaccaagtccccgagcggcacaatcagtagcaaccccagggcgtagcccgcctgggtcg                                         >  1:4446200‑M1/1‑41 (MQ=255)

                                                                                                               gcagcaATATTGCCCAGTTCGGCGCCATGCCAACGCCGACcagcgcaagcgccgcgaacagcaactggccaagcaacagacgtttacggtcgaccaagtccccgagcggcacaatcagtagcaaccccagggcgtagcccgcctgggtcgc                                        >  1:4981466‑M1/1‑40 (MQ=255)

                                                                                                                 agcaATATTGCCCAGTTCGGCGCCATGCCAACGCCGACcagcgcaagcgccgcgaacagcaactggccaagcaacagacgtttacggtcgaccaagtccccgagcggcacaatcagtagcaaccccagggcgtagcccgcctgggtcgcgc                                      >  2:5126054‑M1/1‑38 (MQ=255)

                                                                                                                  gcaATATTGCCCAGTTCGGCGCCATGCCAACGCCGACcagcgcaagcgccgcgaacagcaactggccaagcaacagacgtttacggtcgaccaagtccccgagcggcacaatcagtagcaaccccagggcgtagcccgcctgggtcgcgcc                                     <  2:1471847‑M1/151‑115 (MQ=255)

                                                                                                                  gcaATATTGCCCAGTGCGGCGCCATGCCAACGCCGACcagcgcaagcgccgcgaacagcaactggccaagcaacagacgtttacggtcgaccaagtccccgagcggcacaatcagtagcaaccccagggcgtagcccgcctgggtcgcgcc                                     <  2:2453608‑M1/151‑115 (MQ=255)

                                                                                                                   cagtattggCCGGTTCGGCGCGATGCCAACGCCGACcagcgcaagcgccgcgaacagcaactggccaagcaacagacgtttacggtcgaccaagtccccgagcggcacaatcagtagcaaccccagggcgtagcccgcctgggtcgcgccg                                    <  2:931191‑M1/148‑116 (MQ=255)

                                                                                                                    aaTATTGCCCAGTTCGGCGCCATGCCAACGCCGACcagcgcaagcgccgcgaacagcaactggccaagcaacagacgtttacggtcgaccaagtccccgagcggcacaatcagtagcaaccccagggcgtagcccgcctgggtcgcgccga                                   <  1:4486697‑M1/151‑117 (MQ=255)

                                                                                                                        ttGCCCAGTTCGGCGCCATGCCAACGCCGACcagcgcaagcgccgcgaacagcaactggccaagcaacagacgtttacggtcgaccaagtccccgagcggcacaatcagtagcaaccccagggcgtagcccgcctgggtcgcgccgactac                               >  1:4292300‑M1/1‑31 (MQ=255)

                                                                                                                         tGCCCAGTTCGGCGCCATGCCAACGCCGACcagcgcaagcgccgcgaacagcaactggccaagcaacagacgtttacggtcgaccaagtccccgagcggcacaatcagtagcaaccccagggcgtagcccgcctgggtcgcgccgactacc                              <  1:2465066‑M1/151‑122 (MQ=255)

                                                                                                                         tGCCCAGTTCGGCGCCATGCCAACGCCGACcagcgcaagcgccgcgaacagcaactggccaagcaacagacgtttacggtcgaccaagtccccgagcggcacaatcagtagcaaccccagggcgtagcccgcctgggtcgcgccgactacc                              >  1:3427906‑M1/1‑30 (MQ=255)

                                                                                                                         tGCCCAGTTCGGCGCCATGCCAACGCCGACcagcgcaagcgccgcgaacagcaactggccaagcaacagacgtttacggtcgaccaagtccccgagcggcacaatcagtagcaaccccagggcgtagcccgcctgggtcgcgccgactacc                              <  1:5047354‑M1/151‑122 (MQ=255)

                                                                                                                           cccAGTTCGGCGCCATGCCAACGCCGACcagcgcaagcgccgcgaacagcaactggccaagcaacagacgtttacggtcgaccaagtccccgagcggcacaatcagtagcaaccccagggcgtagcccgcctgggtcgcgccgactaccca                            <  1:62174‑M1/151‑124 (MQ=255)

                                                                                                                            ccAGTTCGGCGCCATGCCAACGCCGACcagcgcaagcgccgctaacatcaactggccaagcaacagacgtttacggtcgaccaagaccccgagcggcacaatcagtagcaaccccagggcgtagcccgcctgggtcgcgccgactacccag                           <  1:2500857‑M1/151‑125 (MQ=255)

                                                                                                                            ccAGTTCGGCGCCATGCCAACGCCGACcagcgcaagcgccgcgaacagcaactggccaagcaacagacgtttacggtcgaccaagtccccgagcggcacaatcagtagcaaccccagggcgtagcccgcctgggtcgcgccgactacccag                           <  1:2500913‑M1/151‑125 (MQ=255)

                                                                                                                            ccAGTTCGGCGCCATGCCAACGCCGACcagcgcaagcgccgcgaacagcaactggccaagcaacagacgtttacggtcgaccaagtccccgagcggcacaatcagtagcaaccccagggcgtagcccgcctgggtcgcgccgactacccag                           >  2:123174‑M1/1‑27 (MQ=255)

                                                                                                                            ccAGCTCGCCGGCATGGCAACGCCGACcagcgcgcgcgccgcgaacagcacgtggccaagcaacagacgtttacggtcgaccaagtccccgggcggcacaatcagtagcaactccagggcggtgccctcctgggtcgcgccgactacccag                           <  2:4073358‑M1/151‑125 (MQ=255)

                                                                                                                             cAGTTCGGCGCCATGCCAACGCCGACcagcgcaagcgccgcgaacagcaactggccaagcaacagacgtttacggtcgaccaagtccccgagcggcacaatcagtagcaaccccagggcgtagcccgcctgggtcgcgccgactacccagc                          <  2:500421‑M1/151‑126 (MQ=255)

                                                                                                                             cAGTTCGGCGCCATGCCAACGCCGACcagcgcaagcgccgcgaacagcaactggccaagcaacagacgtttacggtcgaccaagtccccgagcggcacaatcagtagcaaccccagggcgtagcccgcctgggtcgcgccgactacccagc                          >  1:150429‑M1/1‑26 (MQ=255)

                                                                                                                                ttCGGCGCCATGCCAACGCCGACcagcgcaagcgccgcgaacagcaactggccaagcaacagacgtttacggtcgaccaagtccccgagcggcacaatcagtagcaaccccagggcgtagcccgcctgggtcgcgccgactacccagccaa                       <  2:528919‑M1/151‑129 (MQ=255)

                                                                                                                                ttCGGCGCCATGCCAACGCCGACcagcgcaagcgccgcgaacagcaactggccaagcaacagacgtttacggtcgaccaagtccccgagcggcacaatcagtagcaaccccagggcgtagcccgcctgggtcgcgccgactacccagccaa                       <  2:4361977‑M1/151‑129 (MQ=255)

                                                                                                                                 tCGGCGCCATGCCAACGCCGACcagcgcaagcgccgcgaacagcaactggccaagcaacagacgtttacggtcgaccaagtccccgagcggcacaatcagtagcaaccccagggcgtcgcccgccacggtcgcgccgactacccagccaca                      >  2:5179024‑M1/1‑22 (MQ=255)

                                                                                                                                   ggCGCCATGCCAACGCCGACcagcgcaagcgccgcgaacagcaactggccaagcaacagacgtttacggtcgaccaagtccccgagcggcacaatcagtagcaaccccagggcgtagcccgcctgggtcgcgccgactacccagccaatct                    <  2:1457110‑M1/151‑132 (MQ=255)

                                                                                                                                         aTGCCAACGCGGACcagcgcaagcgccgcgaacagctactggccaagcaacagacgtttacggtcgaccaagtccccgagcggcacaatcagtagcaaccccagggcgtagcccgcctgggtcgcgccgactacccagccaatctgctgct              <  2:4604046‑M1/151‑138 (MQ=255)

                                                                                                                                         aTGCCAACGCCGACcagcgcaagcgccgcgaacagcaactggccaagcaacagacgtttacggtcgaccaagtccccgagcggcacaatcagtagcaaccccagggcgtagcccgcctgggtcgcgccgactacccagccaatctgctgct              >  2:4451606‑M1/1‑14 (MQ=255)

                                                                                                                                           gCCAACGCCGACcagcgcaagcgccgcgaacagcaactggccaagcaacagacgtttacggtcgaccaagtccccgagcggcacaatcagtagcaaccccagggcgtagcccgcctgggtcgcgccgactacccagccaatctgctgctgc            >  1:4033600‑M1/1‑12 (MQ=255)

                                                                                                                                             cAACGCCGACcagcgcaagcgccgcgaacagcaactggccaagcaacagacgtttacggtcgaccaagtccccgagcggcacaatcagtagcaaccccagggcgtagcccgcctgggtcgcgccgactacccagccaatctgctgctgcgc          >  1:1006783‑M1/1‑10 (MQ=255)

                                                                                                                                              aaCGCCGACcagcgcaagcgccgcgaacagcaactggccaagcaacagacgtttacggtcgaccaagtccccgagcggcacaatcagtagcaaccccagggcgtagcccgcctgggtcgcgccgactacccagccaatctgctgctgcgcc         >  1:3251054‑M1/1‑9 (MQ=255)

                                                                                                                                               aCGCCGACcagcgcaagcgccgcgaacagcaactggccaagcaacagacgtttacggtcgaccaagtccccgagcggcacaatcagtagcaaccccagggcgtagcccgcctgggtcgcgccgactacccagccaatctgctgctgcgcca        <  1:565521‑M1/151‑144 (MQ=255)

                                                                                                                                                cGCCGACcagcgcaagcgccgcgaacagcaactggccaagcaacagacgtttacggtcgaccaagtccccgagcggcacaatcagtagcaaccccagggcgtagcccgcctgggtcgcgccgactacccagccaatctgctgctgcgccac       <  1:4332326‑M1/151‑145 (MQ=255)

                                                                                                                                                 gCCGACcagcgcaagcgccgcgaacagcaactggccaagcaacagacgtttacggtcgaccaagtccccgagcggcacaatcagtagcaaccccagggcgtagcccgcctgggtcgcgccgactacccagccaatctgctgctgcgccacc      >  1:3110046‑M1/1‑6 (MQ=255)

                                                                                                                                                 gCCGACcagcgcaagcgccgcgaacagcaactggccaagcaacagacgtttacggtcgaccaagtccccgagcggcacaatcagtagcaaccccagggcgtagcccgcctgggtcgcgccgactacccagccaacccgctgctgcgccacc      >  2:3620586‑M1/1‑6 (MQ=255)

                                                                                                                                                  ccGACcagcgcaagcgccgcgaacagcaactggccaagcaacagacgtttacggtcgaccaagtccccgagcggcacaatcagtagcaaccccagggcgtagcccgcctgggtcgcgccgactacccagccaatctgctgctgcgcgaccc     >  1:3166815‑M1/1‑5 (MQ=255)

                                                                                                                                                  ccGACcagcgcaagcgccgcgaacagcaactggccaagcaacagacgtttacggtcgaccaagtccccgagcggcacaatcagtagcaaccccagggcgtagcccgcctgggtcgcgccgactacccagccaatctgctgctgcgccaccc     >  1:1448039‑M1/1‑5 (MQ=255)

                                                                                                                                                   cGACcagcgcaagcgccgcgaacagcaactggccaagcaacagacgtttacggtcgaccaagtccccgagcggcacaatcagtagcaaccccagggcgtagcccgcctgggtcgcgccgactacccagccaatctgctgctgcgccacccc    >  1:2126655‑M1/1‑4 (MQ=255)

                                                                                                                                                    gACcagcgcaagcgccgcgaacagcaactggccaagtaacagacgtttacggtcgaccaagtccccgagcggcacaatcagtagcaaccccagggcgtagcccgcctgggtcgcgccgactacccagccaatctgctgctgcgccaccccc   <  2:126730‑M1/151‑149 (MQ=255)

                                                                                                                                                     aCcagcgcaagcgccgcgaacagcaactggccaagcaacagacgtttacggtcgaccaagtccccgagcggcacaatcagtagcaaccccagggcgtagcccgcctgggtcgcgccgactacccagccaatctgctgctgcgccaccccca  <  1:529007‑M1/151‑150 (MQ=255)

TGGTGACAGTGCCTACCGCCTGCCCTTGCTGGCCAGGTGAGGCCAGGCTCGCCGCATGAGCCACCATCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAGTGATTCCACGCTGATCCGGACACTCATTCCACGAGCATCCGGACACCGACTCCACGGTCATCCGGACACTTTTCTGGCAGGCAGCCACGCAGGATTTATT  >  CP009974/1508610‑1508909

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`