Predicted mutation
evidence seq id position mutation annotation gene description
MC JC CP009974 3,503,916 Δ2,603 bp RPPX_15645RPPX_15650 RPPX_15645, RPPX_15650

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ CP009974 3503916–3506512 3506518 7–2603 260 [0] [0] 261 RPPX_15645–RPPX_15650 RPPX_15645,RPPX_15650

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009974 = 35039150 (0.000)245 (0.990) 160/282 0.1 100% intergenic (‑249/+106) RPPX_15640/RPPX_15645 membrane protein/ATPase AAA
?CP009974 3506519 = 0 (0.000)intergenic (‑211/‑14) RPPX_15650/RPPX_15655 integrase/tRNA 2‑thiocytidine biosynthesis protein TtcA

Only 100 of 261 total aligned reads displayed.

GCGTGGCTGCCTGCCAGAAAAGTGTCCGGATGACCGTGGAGTCGGTGTCCGGATGCTCGTGGAATGAGTGTCCGGATCAGCGTGGAATCACTGTCCGGATGCGCGTGGAATGGGTGTCCGAGTCAGCGTGGAATCCGCACACCTCGCGGATCCAAGCGCTATGGGCACCCTCTCGGTCAACCAGAACAAACTGCAAAAACGCCTGCGTCGTCTCGCTGGCGAAGCCATCACCGACTACAACATGATCGAGGATGGCGACAAGGTCATGGTCTGCCTGTCCGGCGGCAAGGACAGCTA  >  CP009974/3506373‑3506669
                                                                                                                                                  |                                                                                                                                                      
tataggaagccgttacctacataaaccgcgctttttagagcaaattgcgctgtaagccgtgctgttgattacaatgaagtctttatcggaatgcctacagcggcgtcgcgtttgtgcgtaaaatagccggcttttgtcacacctcgCGGAt                                                                                                                                                    <  1:1137852‑M2/5‑1 (MQ=255)
 ataggaagccgttacctacataaaccgcgctttttagagcaaattgcgctgtaagccgtgctgttgattacaatgaagtctttatcggaatgcctacagcggcgtcgcgtttgtgcgtaaaatagccggcttttgtcacacctcgCGGATc                                                                                                                                                   <  1:3577265‑M2/6‑1 (MQ=255)
  taggaagccgttacctacataaaccgcgctttttagagcaaattgcgctgtaagccgtgctgttgattacaatgaagtctttatcggaatgcctacagcggcgtcgcgtttgtgcgtaaaatagccggcttttgtcacacctcgCGGATcc                                                                                                                                                  <  2:4818929‑M2/7‑1 (MQ=255)
   aggaagccgttacctacataaaccgcgctttttagagcaaattgcgctgtaagccgtgctgttgattacaatgaagtctttatcggaatgcctacagcggcgtcgcgtttgtgcgtaaaatagccggcttttgtcacacctcgCGGATCCa                                                                                                                                                 >  1:4943803‑M2/144‑151 (MQ=255)
      aagccgttacctacataaaccgcgctttttagagcaaattgcgctgtaagccgtgctgttgattacaatgaagtctttatcggaatgcctacagcggcgtcgcgtttgtgcgtaaaatagccggcttttgtcacacctcgCGGATCCAAgc                                                                                                                                              >  1:2045236‑M2/141‑151 (MQ=255)
       agccgttacctacataaaccgcgctttttagagcaaattgcgctgtaagccgtgctgttgattacaatgaagtctttatcggaatgcctacagcggcgtcgcgtttgtgcgtaaaatagccggcttttgtcacacctcgCGGATCCAAgcg                                                                                                                                             >  1:2709136‑M2/140‑151 (MQ=255)
           gttacctacataaaccgcgctttttagagcaaattgcgctgtaagccgtgctgttgattacaatgaagtctttatcggaatgcctacagcggcgtcgcgtttgtgcgtaaaatagccggcttttgtcacacctcgCGGATCCAAGCGCTAt                                                                                                                                         >  2:459030‑M2/136‑151 (MQ=255)
               cctacataaaccgcgctttttagagcaaattgcgctgtaagccgtgctgttgattacaatgaagtctttatcggaatgcctacagcggcgtcgcgtttgtgcgtaaaatagccggcttttgtcacacctcgCGGATCCAAGCGCTATGGGc                                                                                                                                     >  1:2213066‑M2/132‑151 (MQ=255)
                       aaccgcgctttttagagcaaattgcgctgtaagccgtgctgttgattacaatgaagtctttatcggaatgcctacagcggcgtcgcgtttgtgcgtaaaatagccggcttttgtcacacctcgCGGATCCAAGCGCTATGGGCACCCtctc                                                                                                                             >  1:1457293‑M2/124‑151 (MQ=255)
                        accgcgctttttagagcaaattgcgctgtaagccgtgctgttgattacaatgaagtctttatcggaatgcctacagcggcgtcgcgtttgtgcgtaaaatagccggcttttgtcacacctcgCGGATCCAAGCGCTATGGGCACCCTCTCg                                                                                                                            >  2:4910494‑M2/123‑151 (MQ=255)
                           gcgctttttagagcaaattgcgctgtaagccgtgctgttgattacaatgaagtctttatcggaatgcctacagcggcgtcgcgtttgtgcgtaaaatagccggcttttgtcacacctcgCGGATCCAAGCGCTATGGGCACCCTCTCGGTc                                                                                                                         >  2:1891141‑M2/120‑151 (MQ=255)
                           gcgctttttagagcaaattgcgctgtaagccgtgctgttgattacaatgaagtctttatcggaatgcctacagcggcgtcgcgtttgtgcgtaaaatagccggcttttgtcacacctcgCGGATCCAAGCGCTATGGGCACCCTCTCGGTc                                                                                                                         >  1:1822166‑M2/120‑151 (MQ=255)
                              ctttttagagcaaattgcgctgtaagccgtgctgttgattacaatgaagtctttctcggaatgcctacagcggcgtcgcgtttgtgcgtaaaatagccggcttttgtcacacctcgCGGATCCAAGCGCTATGGGCACCCTCTCGGTCAAc                                                                                                                      >  2:798419‑M2/117‑151 (MQ=255)
                                ttttagagcaaattgcgctgtaagccgtgctgttgattacaatgaagtctttatcggaatgcctacagcggcgtcgcgtttgtgcgtaaaatagccggcttttgtcacacctcgCGGATCCAAGCGCTATGGGCACCCTCTCGGTCAACCa                                                                                                                    >  1:1814797‑M2/115‑151 (MQ=255)
                                  ttagagcaaattgcgctgtaagccgtgctgttgattacaatgaagtctttatcggaatgcctacagcggcgtcgcgtttgtgcgtaaaatagccggcttttgtcacacctcgCGGATCCAAGCGCTATGGGCACCCTCTCGGTCAACCAGa                                                                                                                  <  1:832263‑M2/39‑1 (MQ=255)
                                   tagagcaaattgcgctgtaagccgtgctgttgattacaatgaagtctttatcggaatgcctacagcggcgtcgcgtttgtgcgtaaaatagccggcttttgtcacacctcgCGGATCCAAGCGCTATGGGCACCCTCTCGGTCAACCAGaa                                                                                                                 <  2:737711‑M2/40‑1 (MQ=255)
                                   tagagcaaattgcgctgtaagccgtgctgttgattacaatgaagtctttatcggaatgcctacagcggcgtcgcgtttgtgcgtaaaatagccggcttttgtcacacctcgCGGATCCAAGCGCTATGGGCACCCTCTCGGTCAACCAGaa                                                                                                                 >  1:488498‑M2/112‑151 (MQ=255)
                                    agagcaaattgcgctgtaagccgtgctgttgattacaatgaagtctttatcggaatgcctacagcggcgtcgcgtttgtgcgtaaaatagccggcttttgtcacacctcgCGGATCCAAGCGCTATGGGCACCCTCTCGGTCAACCAGAAc                                                                                                                <  2:309167‑M2/41‑1 (MQ=255)
                                      agcaaattgcgctgtaagccgtgctgttgattacaatgaagtctttatcggaatgcctacagcggcgtcgcgtttgtgcgtaaaatagccggcttttgtcacacctcgCGGATCCAAGCGCTATGGTCACCCGCTCGGCCAACCAGAACaa                                                                                                              >  2:4442260‑M2/109‑151 (MQ=255)
                                       gcaaattgcgctgtaagccgtgctgttgattacaatgaagtctttatcggaatgcctacagcggcgtcgcgtttgtgcgtaaaatagccggcttttgtcacacctcgCGGATCCAAGCGCTATGGGCACCCTCTCGGTCAACCAGAACaaa                                                                                                             <  1:196403‑M2/44‑1 (MQ=255)
                                         aaattgcgctgtaagccgtgctgttgattacaatgaagtctttatcggaatgcctacagcggcgtcgcgtttgtgcgtaaaatagccggcttttgtcacacctcgCGGATCCAAGCGCTATGGGCACCCTCTCGGTCAACCAGAACAAacc                                                                                                           >  2:4398097‑M2/106‑150 (MQ=255)
                                         aaattgcgctgtaagccgtgctgttgattacaatgaagtctttatcggaatgcctacagcggcgtcgcgtttgtgcgtaaaatagccggcttttgtcacacctcgCGGATCCAAGCGCTATGGGCACCCTCTCGGTCAACCAGAACAAACt                                                                                                           >  1:4130273‑M2/106‑151 (MQ=255)
                                          aattgcgctgtaagccgtgctgttgattacaatgaagtctttatcggaatgcctacagcggcgtcgcgtttgtgcgtaaaatagccggcttttgtcacacctcgCGGATCCAAGCGCTATGGGCACCCTCTCGGTCAACCAGAACAAACTg                                                                                                          <  2:1613322‑M2/47‑1 (MQ=255)
                                          aattgcgctgtaagccgtgctgttgattacaatgaagtctttatcggaatgcctacagcggcgtcgcgtttgtgcgtaaaatagccggcttttgtcacacctcgCGGATCCAAGCGCTATGGGCACCCTCTCGGTCAACCAGAACAAACTg                                                                                                          <  2:3936993‑M2/47‑1 (MQ=255)
                                           attgcgctgtaagccgtgctgttgattacaatgaagtctttatcggaatgcctacagcggcgtcgcgtttgtgcgtaaaatagccggcttttgtcacacctcgCGGATCCAAGCGCTATGGGCACCCTCTCGGTCAACCAGAACAAACTGc                                                                                                         >  2:777833‑M2/104‑151 (MQ=255)
                                            ttgcgctgtaagccgtgctgttgattacaatgaagtctttatcggaatgcctacagcggcgtcgcgtttgtgcgtaaaatagccggcttttgtcacacctcgCGGATCCAAGCGCTATGGGCACCCTCTCGGTCAACCAGAACAAACTGCa                                                                                                        >  1:3630224‑M2/103‑151 (MQ=255)
                                             tgcgctgtaagccgtgctgttgattacaatgaagtctttatcggaatgcctacagcggcgtcgcgtttgtgcgtaaaatagccggcttttgtcacacctcgCGGATCCAAGCGCTATGGGCACCCTCTCGGTCAACCAGAACAAACTGCaa                                                                                                       >  1:4805585‑M2/102‑151 (MQ=255)
                                               cgctgtaagccgtgctgttgattacaatgaagtctttatcggaatgcctacagcggcgtcgcgtttgtgcgtaaaatagccggcttttgtcacacctcgCGGATCCAAGCGCTATCGGCACCCTCTCGGTCAACCAGAACAAACTGCaaaa                                                                                                     >  2:3133904‑M2/100‑151 (MQ=255)
                                                gctgtaagccgtgctgttgattacaatgaagtctttatcggaatgcctacagcggcgtcgcgtttgtgcgtaaaatagccggcttttgtcacacctcgCGGATCCAAGCGCTATGGGCACCCTCTCGGTCAACCAGAACAAACTGCaaaaa                                                                                                    >  1:1317011‑M2/99‑151 (MQ=255)
                                                  tgtaagccgtgctgttgattacaatgaagtctttatcggaatgcctacagcggcgtcgcgtttgtgcgtaaaatagccggcttttgtcacacctcgCGGATCCAAGCGCTATGGGCACCCTCTCGGTCAACCAGAACAAACTGCAAAAACg                                                                                                  <  2:3831445‑M2/55‑1 (MQ=255)
                                                   gtaagccgtgctgttgattacaatgaagtctttatcggaatgcctacagcggcgtcgcgtttgtgcgtaaaatagccggcttttgtcacacctcgCGGATCCAAGCGCTATGGGCACCCTCTCGGTCAACCAGAACAAACTGCAAAAACGc                                                                                                 <  1:3712244‑M2/56‑1 (MQ=255)
                                                    taagccgtgctgttgattacaatgaagtctttatcggaatgcctacagcggcgtcgcgtttgtgcgtaaaatagccggcttttgtcacacctcgCGGATCCAAGCGCTATGGGCACCCTCTCGGTCAACCAGAACAAACTGCAAAAACGcc                                                                                                <  2:3514715‑M2/57‑1 (MQ=255)
                                                     aagccgtgctgttgattacaatgaagtctttatcggaatgcctacagcggcgtcgcgtttgtgcgtaaaatagccggcttttgtcacacctcgCGGATCCAAGCGCTATGGGCACCCTCTCGGTCAACCAGAACAAACTGCAAAAACGCCt                                                                                               >  2:2867373‑M2/94‑151 (MQ=255)
                                                     aagccgtgctgttgattacaatgaagtctttatcggaatgcctacagcggcgtcgcgtttgtgcgtaaaatagccggcttttgtcacacctcgCGGATCCAAGCGCTATGGGCACCCTCTCGGTCAACCAGAACAAACTGCAAAAACGCCt                                                                                               <  1:2661073‑M2/58‑1 (MQ=255)
                                                          gtgctgttgattacaatgaagtctttatcggaatgcctacagcggcgtcgcgtttgtgcgtaaaatagccggcttttgtcacacctcgCGGATCCAAGCGCTATGGGCACCCTCTCGGTCAACCAGAACAAACTGCAAAAACGCCTGcgtc                                                                                          >  1:1472321‑M2/89‑151 (MQ=255)
                                                          gtgctgttgattacaatgaagtctttatcggaatgcctacagcggcgtcgcgtttgtgcgtaaaatagccggcttttgtcacacctcgCGGATCCAAGCGCTATGGGCACCCTCTCGGTCAACCAGAACAAAAAAAAAAAACGCCTGcgtc                                                                                          <  2:2324482‑M2/63‑1 (MQ=255)
                                                           tgctgttgattacaatgaagtctttatcggaatgcctacagcggcgtcgcgtttgtgcgtaaaatagccggcttttgtcacacctcgCGGATCCAAGCGCTATGGGCACCCTCTCGGTCAACCAGAACAAACTGCAAAAACGCCTGcgtcg                                                                                         <  1:993060‑M2/64‑1 (MQ=255)
                                                           tgctgttgattacaatgaagtctttatcggaatgcctacagcggcgtcgcgtttgtgcgtaaaatagccggcttttgtcacacctcgCGGATCCAAGCGCTATGGGCACCCTCTCGGTCAACCACAACAAACTCCAAAAACGCCTGcgtcg                                                                                         >  2:2776802‑M2/88‑151 (MQ=255)
                                                             ctgttgattacaatgaagtctttatcggaatgcctacagcggcgtcgcgtttgtgcgtaaaatagccggcttttgtcacacctcgCGGATCCAAGCGCTATGGGCACCCTCTCGGTCAACCAGAACAAACTGCAAAAACGCCTGCgtcgtc                                                                                       <  1:2176973‑M2/66‑1 (MQ=255)
                                                               gttgattacaatgaagtctttatcggaatgcctacagcggcgtcgcgtttgtgcgtaaaatagccggcttttgtcacacctcgCGGATCCAAGCGCTATGGGCACCCTCTCGGTCAACCAGAACAAACTGCAAAAACGCCTGCGTCGtctc                                                                                     <  1:1779325‑M2/68‑1 (MQ=255)
                                                               gttgattacaatgaagtctttatcggaatgcctacagcggcgtcgcgtttgtgcgtaaaatagccggcttttgtcacacctcgCGGATCCAAGCGCTATGGGCACCCTCTCGGTCAACCAGAACAAACTGCAAAAACGCCTACGTCGtctc                                                                                     >  1:2917236‑M2/84‑151 (MQ=255)
                                                                   attacaatgaagtctttatcggaatgcctacagcggcgtcgcgtttgtgcgtaaaatagccggcttttgtcacacctcgCGGATCCAAGCGCTATGGGCACCCTCTCGGTCAACCAGAACAAACTGCAAAAACGCCTGCGTCGTCTCGCTg                                                                                 <  1:424811‑M2/72‑1 (MQ=255)
                                                                    ttacaatgaagtctttatcggaatgcctacagcggcgtcgcgtttgtgcgtaaaatagccggcttttgtcacacctcgCGGATCCAAGCGCTATGGGCACCCTCTCGGTCAACCAGAACAAACTGCAAAAACGCCTGCGTCGTCTCGCTgg                                                                                >  2:3576823‑M2/79‑151 (MQ=255)
                                                                    ttacaatgaagtctttatcggaatgcctacagcggcgtcgcgtttgtgcgtaaaatagccggcttttgtcacacctcgCGGATCCAAGCGCTATGGGCACCCTCTCGGTCAACCAGAACAAACTGCAAAAACGCCTGCGTCGTCTCGCTgg                                                                                <  1:583426‑M2/73‑1 (MQ=255)
                                                                      acaatgaagtctttatcggaatgcctacagcggcgtcgcgtttgtgcgtaaaatagccggcttttgtcacacctcgCGGATCCAAGCGCTATGGGCACCCTCTCGGTCAACCAGAACAAACTGCAAAAACGCCTGCGTCGTCTCGCTGGCg                                                                              >  2:4150493‑M2/77‑151 (MQ=255)
                                                                      acaatgaagtctttatcggaatgcctacagcggcgtcgcgtttgtgcgtaaaatagccggcttttgtcacacctcgCGGATCCAAGCGCTATGGGCACCCTCTCGGTCAACCAGAACAAACTGCAAAAACGCCTGCGTCGTCTCGCTGGCg                                                                              >  1:2732229‑M2/77‑151 (MQ=255)
                                                                         atgaagtctttatcggaatgcctacagcggcgtcgcgtttgtgcgtaaaatagccggcttttgtcacacctcgCGGATCCAAGCGCTATGGGCACCCTCTCGGTCAACCAGAACAAACTGCAAAAACGCCTGCGTCGTCTCGCTGGCGAAg                                                                           >  1:4373814‑M2/74‑151 (MQ=255)
                                                                          tgaagtctttatcggaatgcctacagcggcgtcgcgtttgtgcgtaaaatagccggcttttgtcacacctcgCGGATCCAAGCGCTATGGGCACCCTCTCGGTCAACCAGAACAAACTGCAAAAACGCCTGCGTCGTCTCGCTGGCGAAGc                                                                          >  1:3561667‑M2/73‑151 (MQ=255)
                                                                              gtctttatcggaatgcctacagcggcgtcgcgtttgtgcgtaaaatagccggcttttgtcacacctcgCGGATCCAAGCGCTATGGGCACCCTCTCGGTCAACCAGAACAAACTGCAAAAACGCCTGCGTCGTCTCGCTGGCGAAGCCATc                                                                      >  2:107319‑M2/69‑151 (MQ=255)
                                                                                ctttatcggaatgcctacagcggcgtcgcgtttgtgcgtaaaatagccggcttttgtcacacctcgCGGATCCAAGCGCTATGGGCACCCTCTCGGTCAACCAGAACAAACTGCAAAAACGCCTGCGTCGTCTCGCTGGCGAAGCCATCAc                                                                    >  2:388842‑M2/67‑151 (MQ=255)
                                                                                ctttatcggaatgcctacagcggcgtcgcgtttgtgcgtaaaatagccggcttttgtcacacctcgCGGATCCAAGCGCTATGGGCACCCCCCCGGTCACCCAGAACAATCTGCAAAAACGCCCGCGTCGTCTCGCTCGCGACGCcaccac                                                                    >  2:2508055‑M2/67‑151 (MQ=255)
                                                                                 tttatcggaatgcctacagcggcgtcgcgtttgtgcgtaaaatagccggcttttgtcacacctcgCGGATCCAAGCGCTATGGGCACCCTCTCGGTCAACCAGAACCAACTGCAAAAACGCCTGCGTCGTCTCGCTGGCGAAGCCATCAcc                                                                   >  2:4850501‑M2/66‑151 (MQ=255)
                                                                                 tttatcggaatgcctacagcggcgtcgcgtttgtgcgtaaaatagccggcttttgtcacacctcgCGGATCCAAGCGCTATGGGCACCCTCTCGGTCAACCAGAACAAACTGCAAAAACGCCTGCGTCGTCTCGCTGGCGAAGCCATCAcc                                                                   <  1:666069‑M2/86‑1 (MQ=255)
                                                                                 tttatcggaatgcctacagcggcgtcgcgtttgtgcgtaaaatagccggcttttgtcacacctcgCGGATCCAAGCGCTATGGGCACCCTCTCGGTCAACCAGAACAAACTGCAAAAACGCCTGCGTCGTCTCGCCGGCGAAGCCATCacg                                                                   >  2:1519170‑M2/66‑150 (MQ=255)
                                                                                  ttatcggaatgcctacagcggcgtcgcgtttgtgcgtaaaatagccggcttttgtcacacctcgCGGATCCAAGCGCTATGGGCACCCTCTCGGTCAACCAGAACaa                                                                                                              <  1:2985670‑M2/43‑1 (MQ=255)
                                                                                  ttatcggaatgcctacagcggcgtcgcgtttgtgcgtaaaatagccggcttttgtcacacctcgCGGATCCAAGCGCTATGGGCACCCTCTCGGTCAACCAGAACaa                                                                                                              >  2:2985670‑M2/65‑107 (MQ=255)
                                                                                  ttatcggaatgcctacagcggcgtcgcgtttgtgcgtaaaatagccggcttttgtcacacctcgCGGATCCAAGCGCTATGGGCACCCTCTCGGTCAACCAGAACAAACTGCAAAAACGCCTGCGTCGTCTCGCTGGCGAAGCCATCACCg                                                                  >  1:2850627‑M2/65‑151 (MQ=255)
                                                                                   tatcggaatgcctacagcggcgtcgcgtttgtgcgtaaaatagccggcttttgtcacacctcgCGGATCCAAGCGCTATGGGCACCCTCTCGGTCAACCAGAACAAACTGCAAAAACGCCTGCGTCGTCTCGCTGGCGAAGCCATCACCGa                                                                 >  2:3372232‑M2/64‑151 (MQ=255)
                                                                                    atcggaatgcctacagcggcgtcgcgtttgtgcgtaaaatagccggcttttgtcacacctcgCGGATCCAAGCGCTATGGGCACCCTCTCGGTCAACCAGAACAAACTGCAAAAACGCCTGCGTCGTCTCGCTGGCGAAGCCATCACCGAc                                                                <  2:5145102‑M2/89‑1 (MQ=255)
                                                                                    atcggaatgcctacagcggcgtcgcgtttgtgcgtaaaatagccggcttttgtcacacctcgCGGATCCAAGCGCTATGGGCACCCTCTCGGTCAACCAGAACAAACTGCAAAAACGCCTGCGTCGTCTCGCTGGCGAAGCCATCACCGAc                                                                >  1:4406098‑M2/63‑151 (MQ=255)
                                                                                          atgcctacagcggcgtcgcgtttgtgcgtaaaatagccggcttttgtcacacctcgCGGATCCAAGCGCTATGGGCACCCTCTCGGTCAACCAGAACAAACTGCAAAAACGCCTGCGTCGTCTCGCTGGCGAAGCCATCACCGACTacaac                                                          >  2:4534689‑M2/57‑151 (MQ=255)
                                                                                           tgcctacagcggcgtcgcgtttgtgcgtaaaatagccggcttttgtcacacctcgCGGATCCAAGCGCTATGGGCACCCTCTCGGTCAACCAGAACAAACTGCAAAAACGCCTGCGTCGTCTCGCTGGCGAAGCCATCACCGACTacaaca                                                         >  1:3414014‑M2/56‑151 (MQ=255)
                                                                                            gcctacagcggcgtcgcgtttgtgcgtaaaatagccggcttttgtcacacctcgCGGATCCAAGCGCTATGGGCACCCTCTCGGTCAACCAGAACAAACTGCAAAAACGCCTGCGTCGTCTCGCTGGCGAAGCCATCACCGACTACAACAt                                                        >  1:2673860‑M2/55‑151 (MQ=255)
                                                                                             cctacagcggcgtcgcgtttgtgcgtaaaatagccggcttttgtcacacctcgCGGATCCAAGCGCTATGGGCACCCTCTCGGTCAACCAGAACAAACTGCAAAAACGCCTGCGTCGTCTCGCTGGCGAAGCCATCACCGACTACAACATg                                                       <  2:5068396‑M2/98‑1 (MQ=255)
                                                                                             cctacagcggcgtcgcgtttgtgcgtaaaatagccggcttttgtcacacctcgCGGATCCAAGCGCTATGGGCACCCTCTCGGTCAACCAGAACAAACTGCAAAAACGCCTGCGTCGTCTCGCTGGCGAAGCCATCACCGACTACAACATg                                                       <  2:4343187‑M2/98‑1 (MQ=255)
                                                                                              ctacagcggcgtcgcgtttgtgcgtaaaatagccggcttttgtcacacctcgCGGATCCAAGCGCTATGGGCACCCTCTCGGTCAACCAGAACAAACTGCAAAAACGCCTGCGTCGTCTCGCTGGCGAAGCCATCACCGACTACAACATGa                                                      >  1:312411‑M2/53‑151 (MQ=255)
                                                                                              ctacagcggcgtcgcgtttgtgcgtaaaatagccggcttttgtcacacctcgCGGATCCAAGCGCTATGGGCACCCTCTCGGTCAACCAGAACAAACTGCAAAAACGCCTGCGTCGTCTCGCTGGCGAAGCCATCACCGACTACAACATGa                                                      <  1:3210222‑M2/99‑1 (MQ=255)
                                                                                                acagcggcgtcgcgtttgtgcgtaaaatagccggcttttgtcacacctcgCGGATCCAAGCGCTATGGGTACCCTCTCGGTCAACCAGAACAAACTGCAAAAACGCCTGCGTCGTCTCGCTGGCGAAGCCATCACCGACTACAACATGATc                                                    >  1:3856843‑M2/51‑151 (MQ=255)
                                                                                                 cagcggcgtcgcgtttgtgcgtaaaatagccggcttttgtcacacctcgCGGATCCAAGCGCTATGGGCACCCTCTCGGTCAACCAGAACAAACTGCAAAAACGCCTGCGTCGTCTCGCTGGCGAAGCCATCACCGACTACAACATGATCg                                                   >  1:1187654‑M2/50‑151 (MQ=255)
                                                                                                  agcggcgtcgcgtttgtgcgtaaaatagccggcttttgtcacacctcgCGGATCCAAGCGCTATGGGCACCCTCTCGGTCAACCAGAACAAACTGCAAAAACGCCTGCGTCGTCTCGCTGGCGAAGCCATCACCGACTACAACATGATCGa                                                  >  2:2684466‑M2/49‑151 (MQ=255)
                                                                                                  agcggcgtcgcgtttgtgcgtaaaatagccggcttttgtcacacctcgCGGATCCAAGCGCTATGGGCACCCTCTCGGTCAACCAGAACAAACTGCAAAAACGCCTGCGTCGTCTCGCTGGCGAAGCCATCACCGACTACAACATGATCGa                                                  >  1:4682616‑M2/49‑151 (MQ=255)
                                                                                                   gcggcgtcgcgtttgtgcgtaaaatagccggcttttgtcacacctcgCGGATCCAAGCGCTATGGGCACCCTCTCGGTCAACCAGAACAAACTGCAAAAACGCCTGCGTCGTCTCGCTGGCGAAGCCATCACCGACTACAACATGATCGAg                                                 <  1:3841084‑M2/104‑1 (MQ=255)
                                                                                                    cggcgtcgcgtttgtgcgtaaaatagccggcttttgtcacacctcgCGGATCCAAGCGCTATGGGCACCCTCTCGGTCAACCAGAACAAACTGCAAAAACGCCTGCGTCGTCTCGCTGGCGAAGCCATCACCGACTACAACATGATCGAgg                                                >  1:1703291‑M2/47‑151 (MQ=255)
                                                                                                       cgtcgcgtttgtgcgtaaaatagccggcttttgtcacacctcgCGGATCCAAGCGCTATGGGCACCCTCTCGGTCAACCAGAACAAACTGCAAAAACGCCTGCGTCGTCTCGCTGGCGAAGCCATCACCGACTACAACATGATCGAGGATg                                             >  1:4516918‑M2/44‑151 (MQ=255)
                                                                                                       cgtcgcgtttgtgcgtaaaatagccggcttttgtcacacctcgCGGATCCAAGCGCTATGGGCACCCTCTCGGTCAACCAGAACAAACTGCAAAAACGCCTGCGTCGTCTCGCTGGCGAAGCCATCACCGACTACAACATGATCGAGGATg                                             >  2:2140110‑M2/44‑151 (MQ=255)
                                                                                                           gcgtttgtgcgtaaaatagccggcttttgtcacacctcgCGGATCCAAGCGCTATGGGCACCCTCTCGGTCAACCAGAACAAACTGCAAAAACGCCTGCGTCGTCTCGCTGGCGAAGCCATCACCGACTACAACATGATCGAGGATGGCGa                                         >  2:20006‑M2/40‑151 (MQ=255)
                                                                                                             gtttgtgcgtaaaatagccggcttttgtcacacctcgCGGATCCAAGCGCTATGGGCACCCTCTCGGTCAACCAGAACAAACTGCAAAAACGCCTGCGTCGTCTCGCTGGCGAAGCCATCACCGACTACAACATGATCGAGGATGGCGACa                                       >  1:3447265‑M2/38‑151 (MQ=255)
                                                                                                                tgtgcgtaaaatagccggcttttgtcacacctcgCGGATCCAAGCGCTATGGGCACCCTCTCGGTCAACCAGAACAAACTGCAAAAACGCCTGCGTCGTCTCGCTGGCGAAGCCATCACCGACTACAACATGATCGAGGATGGCGACAAgg                                    <  1:132666‑M2/117‑1 (MQ=255)
                                                                                                                 gtgcgtaaaatagccggcttttgtcacacctcgCGGATCCAAGCGCTATGGGCACCCTCTCGGTCAACCAGAACAAACTGCAAAAACGCCTGCGTCGTCTCGCTGGCGAAGCCATCACCGACTACAACATGATCGAGGATGGCGACAAGGt                                   >  1:1911743‑M2/34‑151 (MQ=255)
                                                                                                                 gtgcgtaaaatagcaggcttttgtcccacctcgCGGATCCAAGCGCTATGGGCACCCTCTCGGTCAACCAGAACAAACTGCAAAAACGCCTGCGTCGTCTCGCTGGCGAAGCCATCACCGACTACAACATGATCGAGGATGGCGACAAGGt                                   <  2:328100‑M2/118‑1 (MQ=255)
                                                                                                                  tgcgtaaaatagccggcttttgtcacacctcgCGGATCCAAGCGCTATGGGCACCCTCTCGGTCAACCAGAACAAACTGCAAAAACGCCTGCGTCGTCTCGCTGGCGAAGCCATCACCGACTACAACATGATCGAGGATGGCGACAAGGTc                                  >  1:5112777‑M2/33‑151 (MQ=255)
                                                                                                                     gtaaaatagccggcttttgtcacacctcgCGGATCCAAGCGCTATGGGCACCCTCTCGGTCAACCAGAACAAACTGCAAAAACGCCTGCGTCGTCTCGCTGGCGAAGCCATCACCGACTACAACATGATCGAGGATGGCGACAAGGTCATg                               <  2:42448‑M2/122‑1 (MQ=255)
                                                                                                                      taaaatagccggcttttgtcacacctcgCGGATCCAAGCGCTATGGGCACCCTCTCGGTCAACCAGAACAAACTGCAAAAACGCCTGCGTCGTCTCGCTGGCGAAGCCATCACCGACTACAACATGATCGAGGATGGCGACAAGGTCATgg                              >  2:2616050‑M2/29‑151 (MQ=255)
                                                                                                                        aaggagccggctgttggcacacctcgCGGATCCAAGCGCTATGGGCACCCTGTCGGTCAACCAGAACAAACTGCAAAAACGCCTGCGTCGTCGCGCGGGCGAAGCCATCACCGAGTACAACAAGATCGAGGATGGCGACAAGGTCatgggc                            <  2:2637922‑M2/125‑3 (MQ=255)
                                                                                                                        aaatagccggcttttgtcacacctcgCGGATCCAAGCGCTATGGGCACCCTCTCGGTCAACCAGAACAAACTGCAAAAACGCCTGCGTCGTCTCGCTGGCGAAGCCATCACCGACTACAACATGATCGAGGATGGCGACAAGGTCATGGTc                            >  2:5155912‑M2/27‑151 (MQ=255)
                                                                                                                        aaatagccggcttttgtcacacctcgCGGATCCAAGCGCTATGGGCACCCTCTCGCTCAACCAGAACAAACTGCAAAAACGCCTGCGTCGTCTCGCTGGCGAAGCCATCACCGACTACAACATGATCGAGGATGGCGACAAGGTCATGGTc                            <  1:3078602‑M2/125‑1 (MQ=255)
                                                                                                                           tagccggcttttgtcacacctcgCGGATCCAAGCGCTATGGGCACCCTCTCGGTCAACCAGAACAAACTGCAAAAACGCCTGCGTCGTCTCGCTGGCGAAGCCATCACCGACTACAACATGATCGAGGATGGCGACAAGGTCATGGTCTGc                         <  2:3721071‑M2/128‑1 (MQ=255)
                                                                                                                               cggctgttgtcacacctcgCGGATCCAAGCGCTATGGGCACCCTCTCGGTCAACCAGAACAAACTGCAAAAACGCCTGCGTCGTCTCGCTGGCGAAGCCATCACCGACTACAACATGATCGAGGACGGCGACAAGGTCATGGTCCGCCtga                     >  2:533063‑M2/20‑150 (MQ=255)
                                                                                                                                ggcttttgtcacacctcgCGGATCCAAGCGCTATGGGCACCCTCTCGGTCAACAAGAACAAACTGCAAAAACGCCTGCGTCGTCTCGCTGGCGAAGCCATCACCGACTACAACATGATCGAGGATGGCGACAAGGTCATGGTCTGCCTGTc                    <  1:167495‑M2/133‑1 (MQ=255)
                                                                                                                                 gcttttgtcacacctcgCGGATCCAAGCGCTATGGGCACCCTCTCGGTCAACCAGAACAAACTGCAAAAACGCCTGCGTCGTCTCGCTGGCGAAGCCATCACCGACTACAACATGATCGAGGATGGCGACAAGGTCATGGTCTGCCTGTcc                   >  2:2441703‑M2/18‑151 (MQ=255)
                                                                                                                                 gcttttgtcacacctcgCGGATCCAAGCGCTATGGGCACCCTCTCGGTCAACCAGAACAAACTGCAAAAACGCCTGCGTCGTCTCGCTGGCGAAGCCATCACCGACTACAACATGATCGAGGATGGCGACAAGGTCATGGTCTGCCTGTcc                   >  1:3986284‑M2/18‑151 (MQ=255)
                                                                                                                                     ttgtcacacctcgCGGATCCAAGCGCTATGGGCACCCTCTCGGTCAACCAGAACAAACTGCAAAAACGCCTGCGTCGTCTCGCTGGCGAAGCCATCACCGACTACAACATGATCGAGGATGGCGACAAGGTCATGGTCTGCCTGTCcggcg               <  1:3921358‑M2/138‑1 (MQ=255)
                                                                                                                                     ttgtcacacctcgCGGATCCAAGCGCTATGGGCACCCTCTCGGTCAACCAGAACAAACTGCAAAAACGCCTGCGTCGTCTCGCTGGCGAAGCCATCACCGACTACAACATGATCGAGGATGGCGACAAGGTCATGGTCTGCCTGTCcggcg               <  1:4404553‑M2/138‑1 (MQ=255)
                                                                                                                                        tcacacctcgCGGATCCAAGCGCTATGGGCACCCTCTCGGTCAACCAGAACAAACTGCAAAAACGCCTGCGTCGTCTCGCTGGCGAAGCCATCACCGACTACAACATGATCGAGGATGGCGACAAGGTCATGGTCTGCCTGTCCGGCGGCa            <  2:1014692‑M2/141‑1 (MQ=255)
                                                                                                                                            acctcgCGGATCCAAGCGCTATGGGCACCCTCTCGGTCAACCAGAACAAACTGCAAAAACGCCTGCGTCGTCTCCCTGGCGAAGCCATCACCGACTACAACATGATCGAGGATGGCGACAAGGTCATGGTCTGCCTGTCCGGCGGCAAGGa        >  2:2465107‑M2/7‑151 (MQ=255)
                                                                                                                                              ctcgCGGATCCAAGCGCTATGGGCACCCTCTCGGTCAACCAGAACAAACTGCAAAAACGCCTGCGTCGTCTCGCTGGCGAAGCCATCACCGACTACAACATGATCGAGGATGGCGACAAGGTCATGGTCTGCCTGTCCGGCGGCAAGGACa      >  2:4387012‑M2/5‑151 (MQ=255)
                                                                                                                                               tcgCGGATCCAAGCGCTATGGGCACCCTCTCGGTCAACCAGAACAAACTGCAAAAACGCCTGCGTCGTCTCGCTGGCGAAGCCATCACCGACTACAACATGATCGAGGATGGCGACAAGGTCATGGTCTGCCTGTCCGGCGGCAAGGACAg     <  2:4997332‑M2/148‑1 (MQ=255)
                                                                                                                                               tcgCGGATCCAAGCGCTATGGGCACCCTCTCGGTCAACCAGAACAAACTGCAAAAACGCCTGCGTCGTCTCGCTGGCGAAGCCATCACCGACTACAACATGATCGAGGATGGCGACAAGGTCATGGTCTGCCTGTCCGGCGGCAAGGACAg     <  1:1389828‑M2/148‑1 (MQ=255)
                                                                                                                                                 gCGGATCCAAGCGCTATGGGCACCCTCTCGGTCAACCAGAACAAACTGCAAAAACGCCTGCGTCGTCTCGCTGGCGAAGCCATCACCGACTACAACATGATCGAGGATGGCGACAAGGTCATGGTCTGCCTGTCCGGCGGCAAGGACAGCt   >  2:3641532‑M2/2‑151 (MQ=255)
                                                                                                                                                  cgGATCCAAGCGCTATGGGCACCCTCTCGGTCAACCAGAACAAACTGCAAAAACGCCTGCGTCGTCTCGCTGGCGAAGCCATCACCGACTACAACATGATCGAGGATGGCGACAAGGTCATGGTCTGCCTGTCCGGCGGCAAGGACAGCTa  <  1:2500834/151‑1 (MQ=255)
                                                                                                                                                  |                                                                                                                                                      
GCGTGGCTGCCTGCCAGAAAAGTGTCCGGATGACCGTGGAGTCGGTGTCCGGATGCTCGTGGAATGAGTGTCCGGATCAGCGTGGAATCACTGTCCGGATGCGCGTGGAATGGGTGTCCGAGTCAGCGTGGAATCCGCACACCTCGCGGATCCAAGCGCTATGGGCACCCTCTCGGTCAACCAGAACAAACTGCAAAAACGCCTGCGTCGTCTCGCTGGCGAAGCCATCACCGACTACAACATGATCGAGGATGGCGACAAGGTCATGGTCTGCCTGTCCGGCGGCAAGGACAGCTA  >  CP009974/3506373‑3506669

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.