BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	CP009974	3,503,916	Δ2,603 bp		RPPX_15645–RPPX_15650	RPPX_15645, RPPX_15650

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	CP009974	3503916–3506512	3506518	7–2603	260 [0]	[0] 261	RPPX_15645–RPPX_15650	RPPX_15645,RPPX_15650

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009974	= 3503915	0 (0.000)	245 (0.990)	160/282	0.1	100%	intergenic (‑249/+106)	RPPX_15640/RPPX_15645	membrane protein/ATPase AAA
*	?	CP009974	3506519 =	0 (0.000)	245 (0.990)	160/282	0.1	100%	intergenic (‑211/‑14)	RPPX_15650/RPPX_15655	integrase/tRNA 2‑thiocytidine biosynthesis protein TtcA

Only 100 of 260 total aligned reads displayed.

CGCAGTATAGGAAGCCGTTACCTACATAAACCGCGCTTTTTAGAGCAAATTGCGCTGTAAGCCGTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGTGCGGATTCCACGCCATTCGGACACTCAGCCCACGCTGATCCGGACACCTGTTCCACGCTCATTCGGACAGGCAGTCGGAGCGCAGCGACGCAGGGGTGGCATTGTTAGTCCGGGTTGGCTGGCGTCGTCAATTTCTGCGTCCGTTTGCG  >  CP009974/3503765‑3504065

cGCAGTATAGGAAGCCGTTACCTACATAAACCGCGCTTTTTAGAGCAAATTGCGCTGTAAGCCGTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCG                                                                                                                                                        <  1:5021782‑M1/151‑1 (MQ=255)

     tataGGAAGCCGTTACCTACATAAACCGCGCTTTTTAGAGCAAATTGCGCTGTAAGCCGTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggat                                                                                                                                                   <  1:1137852‑M1/151‑6 (MQ=255)

      ataGGAAGCCGTTACCTACATAAACCGCGCTTTTTAGAGCAAATTGCGCTGTAAGCCGTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatc                                                                                                                                                  <  1:3577265‑M1/151‑7 (MQ=255)

       taGGAAGCCGTTACCTACATAAACCGCGCTTTTTAGAGCAAATTGCGCTGTAAGCCGTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatcc                                                                                                                                                 <  2:4818929‑M1/151‑8 (MQ=255)

          gAAGCCGTTACCTACATAAACCGCGCTTTTTAGAGCAAATTGCGCTGTAAGCCGTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaag                                                                                                                                              >  2:362975‑M1/1‑141 (MQ=255)

                gTTACCTACATAAACCGCGCTTTTTAGAGCAAATTGCGCTGTAAGCCGTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctat                                                                                                                                        >  2:459030‑M1/1‑135 (MQ=255)

                gTTACCTACATAAACCGCGCTTTTTAGAGCAAATTGCGCTGTAAGCCGTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctat                                                                                                                                        >  1:2154527‑M1/1‑135 (MQ=255)

                gTTACCTACATAAACCGCGCTTTTTAGAGCAAATTGCGCTGTAAGCCGTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctat                                                                                                                                        <  1:197663‑M1/151‑17 (MQ=255)

                   aCCTACATAAACCGCGCTTTTTAGAGCAAATTGCGCTGTAAGCCGTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatggg                                                                                                                                     >  1:998468‑M1/1‑132 (MQ=255)

                      tACATAAACCGCGCTTTTTAGAGCAAATTGCGCTGTAAGCCGTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccacgcgctatgggcac                                                                                                                                  >  2:4404553‑M1/1‑129 (MQ=255)

                         aTAAACCGCGCTTTTTAGAGCAAATTGCGCTGTAAGCCGTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccct                                                                                                                               <  1:3673250‑M1/151‑26 (MQ=255)

                            aaCCGCGCTTTTTAGAGCAAATTGCGCTGTAAGCCGTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctc                                                                                                                            >  1:1457293‑M1/1‑123 (MQ=255)

                             aCCGCGCTTTTTAGAGCAAATTGCGCTGTAAGCCGTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcg                                                                                                                           >  2:4910494‑M1/1‑122 (MQ=255)

                             aCCGCGCTTTTTAGAGCAAATTGCGCTGTAAGCCGTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcg                                                                                                                           <  1:2969204‑M1/151‑30 (MQ=255)

                                gcgcTTTTTAGAGCAAATTGCGCTGTAAGCCGTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtc                                                                                                                        >  1:1822166‑M1/1‑119 (MQ=255)

                                  gcTTTTTAGAGCAAATTGCGCTGTAAGCCGTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaa                                                                                                                      >  1:4383955‑M1/1‑117 (MQ=255)

                                  gcTTTTTAGAGCAAATTGCGCTGTAAGCCGTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaa                                                                                                                      >  2:3097519‑M1/1‑117 (MQ=255)

                                   cTTTTTAGAGCAAATTGCGCTGTAAGCCGTGCTGTTGATTACAATGAAGTCTTTCTCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaac                                                                                                                     >  2:798419‑M1/1‑116 (MQ=255)

                                   cTTTTTAGAGCAAATTGCGCTGTAAGCCGTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaac                                                                                                                     <  1:304552‑M1/151‑36 (MQ=255)

                                     ttttAGAGCAAATTGCGCTGTAAGCCGTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaacca                                                                                                                   >  1:1814797‑M1/1‑114 (MQ=255)

                                      tttAGAGCAAATTGCGCTGTAAGCCGTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccag                                                                                                                  >  1:2663247‑M1/1‑113 (MQ=255)

                                       ttAGAGCAAATTGCGCTGTAAGCCGTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctgggtcaaccaga                                                                                                                 >  2:3747653‑M1/1‑112 (MQ=255)

                                       ttAGAGCAAATTGCGCTGTAAGCCGTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccaga                                                                                                                 <  1:832263‑M1/151‑40 (MQ=255)

                                        tAGAGCAAATTGCGCTGTAAGCCGTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaa                                                                                                                <  2:737711‑M1/151‑41 (MQ=255)

                                         agagCAAATTGCGCTGTAAGCCGTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaac                                                                                                               >  1:3418277‑M1/1‑110 (MQ=255)

                                           agCAAATTGCGCTGTAAGCCGTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatggtcacccgctcggccaaccagaacaa                                                                                                             >  2:4442260‑M1/1‑108 (MQ=255)

                                           agCAAATTGCGCTGTAAGCCGTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaa                                                                                                             <  1:362975‑M1/151‑44 (MQ=255)

                                            gCAAATTGCGCTGTAAGCCGTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaa                                                                                                            <  1:195361‑M1/151‑45 (MQ=255)

                                               aaTTGCGCTGTAAGCCGTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactg                                                                                                         <  2:1613322‑M1/151‑48 (MQ=255)

                                                aTTGCGCTGTAAGCCGTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgc                                                                                                        >  2:777833‑M1/1‑103 (MQ=255)

                                                aTTGCGCTGTAAGCCGTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgc                                                                                                        >  1:4155163‑M1/1‑103 (MQ=255)

                                                   gcgcTGTAAGCCGTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaa                                                                                                     <  2:2365512‑M1/151‑52 (MQ=255)

                                                    cgcTGTAAGCCGTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatcggcaccctctcggtcaaccagaacaaactgcaaaa                                                                                                    >  2:3133904‑M1/1‑99 (MQ=255)

                                                     gcTGTAAGCCGTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaa                                                                                                   >  1:1317011‑M1/1‑98 (MQ=255)

                                                       tGTAAGCCGTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacg                                                                                                 >  2:2780415‑M1/1‑96 (MQ=255)

                                                       tGTAAGCCGTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacg                                                                                                 <  2:3831445‑M1/151‑56 (MQ=255)

                                                         tAAGCCGTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcc                                                                                               <  2:3514715‑M1/151‑58 (MQ=255)

                                                          aaGCCGTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcct                                                                                              >  2:2867373‑M1/1‑93 (MQ=255)

                                                          aaGCCGTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcct                                                                                              <  1:2661073‑M1/151‑59 (MQ=255)

                                                               gTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtc                                                                                         >  2:2661481‑M1/1‑88 (MQ=255)

                                                               gTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtc                                                                                         >  1:1472321‑M1/1‑88 (MQ=255)

                                                                  cTGGTGATTACAATGAAGTCGTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTAACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtc                                                                                      <  1:2177107‑M1/151‑67 (MQ=255)

                                                                    gTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctc                                                                                    <  1:1779325‑M1/151‑69 (MQ=255)

                                                                      tGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgc                                                                                  >  1:4094833‑M1/1‑81 (MQ=255)

                                                                       gATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgct                                                                                 >  1:4370521‑M1/1‑80 (MQ=255)

                                                                        aTTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctg                                                                                >  1:2765373‑M1/1‑79 (MQ=255)

                                                                           aCAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcg                                                                             >  1:2732229‑M1/1‑76 (MQ=255)

                                                                           aCAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcg                                                                             >  2:4150493‑M1/1‑76 (MQ=255)

                                                                                  aGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcgaagccat                                                                      <  1:2893240‑M1/151‑83 (MQ=255)

                                                                                   gTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcgaagccatc                                                                     <  2:223152‑M1/151‑84 (MQ=255)

                                                                                     cTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcgaagccatcac                                                                   >  2:388842‑M1/1‑66 (MQ=255)

                                                                                     cTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcacccccccggtcacccagaacaatctgcaaaaacgcccgcgtcgtctcgctcgcgacgccaccac                                                                   >  2:2508055‑M1/1‑66 (MQ=255)

                                                                                       ttATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaa                                                                                                             >  2:2985670‑M1/1‑64 (MQ=255)

                                                                                        tATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcgaagccatcaccga                                                                <  1:3393086‑M1/151‑89 (MQ=255)

                                                                                        tATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcgaagccatcaccga                                                                >  2:3372232‑M1/1‑63 (MQ=255)

                                                                                         aTCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcgaagccatcaccgac                                                               >  1:4405907‑M1/1‑62 (MQ=255)

                                                                                         aTCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcgaagccatcaccgac                                                               <  2:5145102‑M1/151‑90 (MQ=255)

                                                                                            ggAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcgaagccatcaccgactac                                                            <  1:4635422‑M1/151‑93 (MQ=255)

                                                                                             gAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcgaagccctcaccgactaca                                                           >  2:5161411‑M1/1‑58 (MQ=255)

                                                                                               aTGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcgaagccatcaccgactacaac                                                         >  2:4534689‑M1/1‑56 (MQ=255)

                                                                                                 gCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcgaagccatcaccgactacaacat                                                       >  1:2677645‑M1/1‑54 (MQ=255)

                                                                                                  ccTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcgaagccatcaccgactacaacatg                                                      <  2:4343187‑M1/151‑99 (MQ=255)

                                                                                                  ccTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcgaagccatcaccgactacaacatg                                                      <  2:5068396‑M1/151‑99 (MQ=255)

                                                                                                   cTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcgaagccatcaccgactacaacatga                                                     >  1:312411‑M1/1‑52 (MQ=255)

                                                                                                    tACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcgaagccatcaccgactacaacatgat                                                    <  1:4489210‑M1/151‑101 (MQ=255)

                                                                                                      cAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcgaagccatcaccgactacaacatgatcg                                                  >  1:1187654‑M1/1‑49 (MQ=255)

                                                                                                      cAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcgaagccatcaccgactacaacatgatcg                                                  <  2:2493726‑M1/151‑103 (MQ=255)

                                                                                                       aGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcgaagccatcaccgactacaacatgatcga                                                 >  2:2684466‑M1/1‑48 (MQ=255)

                                                                                                       aGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccaaaacaaaaagcaaaaacgcctgcgtcgtctcgctggcgaagccatcaccgactacaacatgatcga                                                 <  2:4081564‑M1/151‑104 (MQ=255)

                                                                                                         cggcgTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcgaagccatcaccgactacaacatgatcgagg                                               >  1:1703291‑M1/1‑46 (MQ=255)

                                                                                                          ggcgTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcgaagccatcaccgactacaacatgatcgagga                                              >  2:1183105‑M1/1‑45 (MQ=255)

                                                                                                          ggcgTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcgaagccatcaccgactacaacatcaacgaggc                                              >  2:4868877‑M1/1‑45 (MQ=255)

                                                                                                          ggcgTCGCGTTTGTGCGTAAAAGAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaaaaaaaaaaaaaaacgcctgcgtcgtctcgctggcgaagccatcaccgactacaacatgatcgagga                                              <  2:1532290‑M1/151‑107 (MQ=255)

                                                                                                                gcgTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcgaagccatcaccgactacaacatgatcgaggatggcga                                        >  2:20006‑M1/1‑39 (MQ=255)

                                                                                                                    ttGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcgaagccatcaccgactacaacatgatcgaggatggcgacaag                                    <  2:1991987‑M1/151‑117 (MQ=255)

                                                                                                                     tgtgCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcgaagccatcaccgactacaacatgatcgaggatggcgacaagg                                   <  1:132666‑M1/151‑118 (MQ=255)

                                                                                                                     tgtgCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcgaagccatcaccgactacaacatgatcgaggatggcgacaagg                                   >  1:3207177‑M1/1‑34 (MQ=255)

                                                                                                                       tgCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcgaagccatcaccgactacaacatgatcgaggatggcgacaaggtc                                 >  1:383652‑M1/1‑32 (MQ=255)

                                                                                                                       tgCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcgaagccatcaccgactacaacatgatcgaggatggcgacaaggtc                                 >  1:5112777‑M1/1‑32 (MQ=255)

                                                                                                                          gTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcgaagccatcaccgactacaacatgatcgaggatggcgacaaggtcatg                              <  2:42448‑M1/151‑123 (MQ=255)

                                                                                                                           tAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcgaagccatcaccgactacaacatgatcgaggatggcgacaaggtcatgg                             >  2:2616050‑M1/1‑28 (MQ=255)

                                                                                                                           tAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcgaagccatcaccgactacaacatgatcgaggatggcgacaaggtcatgg                             >  1:2254545‑M1/1‑28 (MQ=255)

                                                                                                                                  gCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcgaagccatcaccgactacaacatgatcgaggatggcgacaaggtcatggtctgcct                      <  1:612828‑M1/151‑131 (MQ=255)

                                                                                                                                    cGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcgaagccatcaccgactacaacatgatcgaggatggcgacaaggtcatggtctgcctgt                    <  1:3843849‑M1/151‑133 (MQ=255)

                                                                                                                                    cGGCTGTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcgaagccatcaccgactacaacatgatcgaggacggcgacaaggtcatggtccgcctga                    >  2:533063‑M1/1‑19 (MQ=255)

                                                                                                                                     ggCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaacaagaacaaactgcaaaaacgcctgcgtcgtctcgctggcgaagccatcaccgactacaacatgatcgaggatggcgacaaggtcatggtctgcctgtc                   <  1:167495‑M1/151‑134 (MQ=255)

                                                                                                                                      gCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcgaagccatcaccgactacaacatgatcgaggatggcgacaaggtcatggtctgcctgtcc                  >  2:2441703‑M1/1‑17 (MQ=255)

                                                                                                                                      gCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcgaagccatcaccgactacaacatgatcgaggatggcgacaaggtcatggtctgcctgtcc                  <  1:4888755‑M1/151‑135 (MQ=255)

                                                                                                                                       cTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcgaagccatcaccgactacaacatgatcgaggatggcgacaaggtcatggtctgcctgtccg                 <  1:3979074‑M1/151‑136 (MQ=255)

                                                                                                                                          ttGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcgaagccatcaccgactacaacatgatcgaggatggcgacaaggtcatggtctgcctgtccggcg              <  1:3921358‑M1/151‑139 (MQ=255)

                                                                                                                                             tCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcgaagccatcaccgactacaacatgatcgaggatggcgacaaggtcatggtctgcctgtccggcggca           >  2:3319558‑M1/1‑10 (MQ=255)

                                                                                                                                             tCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcgaagccatcaccgactacaacatgatcgaggatggcgacaaggtcatggtctgcctgtccggcggca           <  2:1014692‑M1/151‑142 (MQ=255)

                                                                                                                                              caccCCTCGcggatccaagcgccatgggcaccctctcggtcaaccagaacaaactgaaaaaacgcctgcgtcgtctcgctggcgaagccatcaccgactacaacatgatcgaggatggcgacaaggtcatggtctgcctgtccggcggcaa          <  1:699314‑M1/151‑143 (MQ=255)

                                                                                                                                                  ccTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcgaagccatcaccgactacaacatgatcgaggatggcgacaaggtcatggtctgcctgtccggcggcaaggac      >  1:3553534‑M1/1‑5 (MQ=255)

                                                                                                                                                   cTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcgaagccatcaccgactacaacatgatcgaggatggcgacaaggtcatggtctgcctgtccggcggcaaggaca     >  2:4387012‑M1/1‑4 (MQ=255)

                                                                                                                                                    tCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcgaagccatcaccgactacaacatgatcgaggatggcgacaaggtcatggtctgcctgtccggcggcaaggacag    <  2:4997332‑M1/151‑149 (MQ=255)

                                                                                                                                                    tCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcgaagccatcaccgactacaacatgatcgaggatggcgacaaggtcatggtctgcctgtccggcggcaaggacag    <  1:1389828‑M1/151‑149 (MQ=255)

                                                                                                                                                    tCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcgaagccatcaccgactacaacatgatcgaggatggcgacaaggtcatggtctgcctgtccggcggcaaggacag    <  1:4857696‑M1/151‑149 (MQ=255)

                                                                                                                                                      gcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcgaagccatcaccgactacaacatgatcgaggatggcgacaaggtcatggtctgcctgtccggcggcaaggacagct  >  2:3641532‑M1/1‑1 (MQ=255)

                                                                                                                                                      gcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcgaagccatcaccgactacaacatgatcgaggatggcgacaaggtcatggtctgcctgtccggcggcaaggacagct  >  1:4789195‑M1/1‑1 (MQ=255)

CGCAGTATAGGAAGCCGTTACCTACATAAACCGCGCTTTTTAGAGCAAATTGCGCTGTAAGCCGTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGTGCGGATTCCACGCCATTCGGACACTCAGCCCACGCTGATCCGGACACCTGTTCCACGCTCATTCGGACAGGCAGTCGGAGCGCAGCGACGCAGGGGTGGCATTGTTAGTCCGGGTTGGCTGGCGTCGTCAATTTCTGCGTCCGTTTGCG  >  CP009974/3503765‑3504065

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`