BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC MC JC	CP009974	5,798,527	Δ2,603 bp	intergenic (‑15/–)	RPPX_25885 ← / –	integrase/–

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	CP009974	1–2595	2595	1–2595	NA [0]	[0] 212	RPPX_00005–RPPX_00010	RPPX_00005,RPPX_00010
*	*	÷	CP009974	5798527	5798534	8	211 [1]	[0] NA	RPPX_25885/–	integrase/–

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009974	2596 =	0 (0.000)	199 (0.800)	140/284	0.7	100%	intergenic (‑203/+211)	RPPX_00010/RPPX_00015	integrase/peptidase S24
*	?	CP009974	= 5798526	0 (0.000)	199 (0.800)	140/284	0.7	100%	intergenic (‑14/–)	RPPX_25885/–	integrase/–

Only 100 of 211 total aligned reads displayed.

CTGACTCGATAAGCGTGTGCCAAAGGAAGGATTGAGCTGGCTCGACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAACAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTCC  >  CP009974/5798377‑5798534

cTGACTCGATAAGCGTGTGCCAAAGGAAGGATTGAGCTGGCTCGACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAa                                                                                                                                                      <  1:1297951‑M2/151‑2 (MQ=255)

cTGACTCGATAAGCGTGTGCCAAAGGAAGGATTGAGCTGGCTCGACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAACCTCATGCCGCTGCCCTCAAa                                                                                                                                                      <  2:2625094‑M2/151‑2 (MQ=255)

 tGACTCGATAAGCGTGTGCCAAAGGAAGGATTGAGCTGGCTCGACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAac                                                                                                                                                     >  2:1335282‑M2/1‑149 (MQ=255)

   aCTCGATAAGCGTGTGCCAAAGGAAGGATTGAGCTGGCTCGACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacac                                                                                                                                                   <  2:772201‑M2/151‑5 (MQ=255)

       gATAAGCGTGTGCCAAAGGAAGGATTGAGCTGGCTCGACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttcc                                                                                                                                               >  1:3832107‑M2/1‑143 (MQ=255)

        aTAAGCGTGTGCCAAAGGAAGGATTGAGCTGGCTCGACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttcca                                                                                                                                              <  2:2968225‑M2/151‑10 (MQ=255)

         tAAGCGTGTGCCAAAGGAAGGATTGAGCTGGCTCGACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaa                                                                                                                                             <  2:4110314‑M2/151‑11 (MQ=255)

         tAAGCGTGTGCCAAAGGAAGGATTGAGCTGGCTCGACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaa                                                                                                                                             <  1:4526098‑M2/151‑11 (MQ=255)

           aGCGTGTGCCAAAGGAAGGATTGAGCTGGCTCGACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatg                                                                                                                                           <  2:626751‑M2/151‑13 (MQ=255)

           aGCGTGTGCCAAAGGAAGGATTGAGCTGGCTCGACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatg                                                                                                                                           >  2:1453809‑M2/1‑139 (MQ=255)

           aGCGTGTGCCAAAGGAAGGATTGAGCTGGCTCGACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatg                                                                                                                                           <  1:2068861‑M2/151‑13 (MQ=255)

              gtggGCCAAAGGAAGGATTGAGCTGGCTCGACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggat                                                                                                                                        >  2:4538965‑M2/1‑136 (MQ=255)

                gtgCCAAAGGAAGGATTGAGCTGGCTCGACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattg                                                                                                                                      >  1:3035047‑M2/1‑134 (MQ=255)

                gtgCCAAAGGAAGGATTGAGCTGGCTCGACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattg                                                                                                                                      <  2:1295142‑M2/151‑18 (MQ=255)

                    cAAAGGAAGGATTGAGCTGGCTCGACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAACacacttccaatggattgcctt                                                                                                                                  <  2:3064080‑M2/151‑22 (MQ=255)

                     aaaGGAAGGATTGAGCTGGCTCGACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgcctta                                                                                                                                 >  1:4885909‑M2/1‑129 (MQ=255)

                        ggaaggaTTGAGCTGGCTCGACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatga                                                                                                                              >  2:137181‑M2/1‑126 (MQ=255)

                         gaaggaTTGAGCTGGCTCGACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaa                                                                                                                             <  1:1819187‑M2/151‑27 (MQ=255)

                         gaaggaTTGAGCTGGCTCGACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaa                                                                                                                             >  1:4246050‑M2/1‑125 (MQ=255)

                          aaggaTTGAGCTGGCTCGACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaag                                                                                                                            >  1:3618879‑M2/1‑124 (MQ=255)

                              aTTGAGCTGGCTCGACTGGCCATCCCTCTGACCCAATCAGCAACGGAAATCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctg                                                                                                                        <  1:4035252‑M2/151‑32 (MQ=255)

                              aTTGAGCTGGCTCGACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctg                                                                                                                        >  1:2983287‑M2/1‑120 (MQ=255)

                               ttGAGCTGGCTCGACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctgg                                                                                                                       >  2:2673490‑M2/1‑119 (MQ=255)

                               ttGAGCTGGCTCGACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctgg                                                                                                                       <  1:4608083‑M2/151‑33 (MQ=255)

                                    cTGGCTCGACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaacc                                                                                                                  <  2:2988819‑M2/151‑38 (MQ=255)

                                      ggCTCGACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaacttc                                                                                                                <  2:1848096‑M2/151‑40 (MQ=255)

                                      ggCTCGACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgc                                                                                                                <  2:4380270‑M2/151‑40 (MQ=255)

                                      ggCTCGACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgc                                                                                                                <  2:4714286‑M2/151‑40 (MQ=255)

                                      ggCTCGACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgc                                                                                                                <  1:3695869‑M2/151‑40 (MQ=255)

                                          gggctggCCCTCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgtt                                                                                                            >  2:1680838‑M2/4‑108 (MQ=255)

                                           gACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccgatggattgccttatgaagcctggaaactgctgttc                                                                                                           <  2:3134312‑M2/151‑45 (MQ=255)

                                           gACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttc                                                                                                           <  1:2937157‑M2/151‑45 (MQ=255)

                                           gACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttc                                                                                                           >  2:1488060‑M2/1‑107 (MQ=255)

                                           gACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttc                                                                                                           >  1:4148114‑M2/1‑107 (MQ=255)

                                               ggCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccaga                                                                                                       <  1:3377748‑M2/151‑49 (MQ=255)

                                               ggCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccaga                                                                                                       >  2:849278‑M2/1‑103 (MQ=255)

                                                 ccATCCCTCTGACCGAATCAGCAACGGAAAGCCGTGAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAAGACCAGCCTAATGCCGCTGCCCTAAAccactaccaatggattgccttaggaagcctggaaactgctgttccagagg                                                                                                     >  2:3248247‑M2/1‑101 (MQ=255)

                                                    tCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggt                                                                                                  >  1:3140212‑M2/1‑98 (MQ=255)

                                                        tctGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcag                                                                                              >  1:3311356‑M2/1‑94 (MQ=255)

                                                         ctGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcaga                                                                                             >  1:4801819‑M2/1‑93 (MQ=255)

                                                            aCCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaagg                                                                                          <  1:1389516‑M2/151‑62 (MQ=255)

                                                              ccAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtg                                                                                        <  1:1571197‑M2/151‑64 (MQ=255)

                                                                aaTCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggc                                                                                      <  2:968080‑M2/151‑66 (MQ=255)

                                                                       aaCGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggact                                                                               >  2:2813776‑M2/1‑79 (MQ=255)

                                                                           gAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctac                                                                           <  1:5162101‑M2/151‑77 (MQ=255)

                                                                           gAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctac                                                                           >  2:3580824‑M2/1‑75 (MQ=255)

                                                                           gAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccctctgaagcctggcaactgctgttccagaggggttcagaacgtggcgcggaccctac                                                                           <  2:2087278‑M2/151‑77 (MQ=255)

                                                                             aaGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacag                                                                         <  2:5158759‑M2/151‑79 (MQ=255)

                                                                             aaGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacag                                                                         <  1:2910195‑M2/151‑79 (MQ=255)

                                                                                 cTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatt                                                                     <  1:2356355‑M2/151‑83 (MQ=255)

                                                                                  ttCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggattt                                                                    <  1:202880‑M2/151‑84 (MQ=255)

                                                                                   tCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCCGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggattta                                                                   >  1:1801274‑M2/1‑67 (MQ=255)

                                                                                     aaaGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttact                                                                 >  1:2243618‑M2/1‑65 (MQ=255)

                                                                                     aaaGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttact                                                                 <  1:2130224‑M2/151‑87 (MQ=255)

                                                                                      aaGGACCGACCTGCTAATGCGAGGGCTTTTGGTGCGGATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttacta                                                                >  2:4078987‑M2/1‑64 (MQ=255)

                                                                                       aGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaa                                                               >  1:4964634‑M2/1‑63 (MQ=255)

                                                                                       aGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaa                                                               >  1:2409609‑M2/1‑63 (MQ=255)

                                                                                       aGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaa                                                               >  2:5038040‑M2/1‑63 (MQ=255)

                                                                                         gATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacg                                                             >  2:1936792‑M2/1‑61 (MQ=255)

                                                                                         gATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacg                                                             >  1:72327‑M2/1‑61 (MQ=255)

                                                                                            cGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgatt                                                          >  2:2550720‑M2/1‑58 (MQ=255)

                                                                                                  gCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacc                                                    <  1:471161‑M2/151‑100 (MQ=255)

                                                                                                     aaTGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccct                                                 <  2:1620655‑M2/151‑103 (MQ=255)

                                                                                                     aaTGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccct                                                 >  2:3773565‑M2/1‑49 (MQ=255)

                                                                                                        gCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctcag                                              >  1:282576‑M2/1‑46 (MQ=255)

                                                                                                         cTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctcaga                                             <  2:1750702‑M2/151‑107 (MQ=255)

                                                                                                         cTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctcaga                                             >  1:4580517‑M2/1‑45 (MQ=255)

                                                                                                          tAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctcagat                                            <  2:2722484‑M2/151‑108 (MQ=255)

                                                                                                           aGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctcagatc                                           >  2:2130224‑M2/1‑43 (MQ=255)

                                                                                                           aGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctcagatc                                           <  1:1261530‑M2/151‑109 (MQ=255)

                                                                                                            ggTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctcagatcg                                          <  1:1171941‑M2/151‑110 (MQ=255)

                                                                                                               cTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggacactacaggatttactaacgattcccaccgctcagctcgttg                                       <  2:4576160‑M2/151‑113 (MQ=255)

                                                                                                                 tttGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctcagatcgttgtt                                     <  1:5148861‑M2/151‑115 (MQ=255)

                                                                                                                  ttgttgCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctcagatcgttgttg                                    <  1:2889243‑M2/151‑116 (MQ=255)

                                                                                                                  ttgttgCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcccggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctcagatcgttgttg                                    >  2:2910385‑M2/1‑36 (MQ=255)

                                                                                                                      tgCGGATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctcacatcgttgttgctca                                <  2:4306155‑M2/151‑120 (MQ=255)

                                                                                                                      tgCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctcagatcgttgttgctca                                >  1:2209295‑M2/1‑32 (MQ=255)

                                                                                                                       gCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctcagatcgttgttgctcag                               >  1:639980‑M2/1‑31 (MQ=255)

                                                                                                                       gCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaagggggcgcggactctacaggatttactaacgattcccacccatcagatcggtgttgctcag                               <  2:530175‑M2/151‑121 (MQ=255)

                                                                                                                         gAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctcagatcgttgttgctcagta                             <  2:216518‑M2/151‑123 (MQ=255)

                                                                                                                          aaTACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctcagatcgttgttgctcagtac                            >  1:1699553‑M2/1‑28 (MQ=255)

                                                                                                                           aTACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggtttagaaggtggcgcggactctacaggatttactaacgattcccacccctcagatcgttgttgctcagtacg                           <  2:3125063‑M2/151‑125 (MQ=255)

                                                                                                                           aTACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctcagatcgttgttgctcagtacg                           >  2:4847128‑M2/1‑27 (MQ=255)

                                                                                                                               cAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctcagatcgttgttgctcagtacgatga                       >  1:2623243‑M2/1‑23 (MQ=255)

                                                                                                                                 gCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctcagatcgttgttgctcagtacgatgatc                     <  2:2295787‑M2/151‑131 (MQ=255)

                                                                                                                                  ccTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgacgcctggcaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctcagatcgtttctgctcagtacgataatcg                    <  1:2388660‑M2/151‑132 (MQ=255)

                                                                                                                                   cTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctcagatcgttgttgctcagtacgatgatcgg                   <  2:902649‑M2/151‑133 (MQ=255)

                                                                                                                                   cTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctcagatcgttgttgctcagtacgatgatcgg                   <  2:3380141‑M2/151‑133 (MQ=255)

                                                                                                                                    tCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctcagatcgttgttgctcagtacgatgatcggc                  <  1:3783215‑M2/151‑134 (MQ=255)

                                                                                                                                     cATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggacgctacaggatttactaacgattcccacccctcagatcgctgttgctcagtacgatgatcggcg                 <  2:2947635‑M2/151‑135 (MQ=255)

                                                                                                                                      aTGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctcagatcgttgttgctcagtacgatgatcggcgt                <  1:1539804‑M2/151‑136 (MQ=255)

                                                                                                                                       tGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctcagatcgttgttgctcagtacgatgatcggcgtc               >  2:3314583‑M2/1‑15 (MQ=255)

                                                                                                                                            cTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctcagatcgttgttgctcagtacgatgatcggcgtcttggc          >  2:4611906‑M2/1‑10 (MQ=255)

                                                                                                                                            cTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctcagatcgttgttgctaagtacgatgatcggcgtcttggc          <  1:1024384‑M2/151‑142 (MQ=255)

                                                                                                                                             tGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctcagatcgttgttgctcagtacgatgatcggcgtcttggcc         <  1:592574‑M2/151‑143 (MQ=255)

                                                                                                                                                 cTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctcagatcgttgttgctcagtacgatgatcggcgtcttggccaagt     >  2:1051521‑M2/1‑5 (MQ=255)

                                                                                                                                                  tAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctcagatcgttgttgctcagtacgatgatcggcgtcttggccaagtc    <  2:3951260‑M2/151‑148 (MQ=255)

                                                                                                                                                   aaaacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctcagatcgttgttgctcagtacgatgatcggcgtcttggccaagtcg   <  1:2691055‑M2/151‑149 (MQ=255)

                                                                                                                                                    aaacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctcagatcgttgttgctcagtacgatgatcggcgtcttggccaagtcgg  <  1:2841398‑M2/151‑150 (MQ=255)

                                                                                                                                                    aaacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctcagatcgttgttgctcagtacgatgatcggcgtcttggccaagtcgg  <  2:3736896‑M2/151‑150 (MQ=255)

CTGACTCGATAAGCGTGTGCCAAAGGAAGGATTGAGCTGGCTCGACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAACAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTCC  >  CP009974/5798377‑5798534

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`