| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | CP009974 | 2,509,653 | Δ2,602 bp | RPPX_11210–[RPPX_11220] | RPPX_11210, RPPX_11215, [RPPX_11220] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | CP009974 | 2509653–2512250 | 2512254 | 5–2602 | 362 [4] | [0] 361 | RPPX_11210–[RPPX_11220] | RPPX_11210,RPPX_11215,[RPPX_11220] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009974 | = 2509652 | 4 (0.010) | 343 (1.090) | 190/288 | 0.1 | 99.4% | intergenic (+3590/‑204) | RPPX_11200/RPPX_11210 | beta‑aspartyl peptidase/integrase |
| ? | CP009974 | 2512255 = | 0 (0.000) | coding (24/1236 nt) | RPPX_11220 | hypothetical protein | |||||
Only 100 of 362 total aligned reads displayed.
TGCTTGAAGAGCAGCCCAGGATCATCGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAGTGATTCCACGCTGATCCGGACACTCATTCCACGAGCATCCGGACACCGACTCCACGGTCATCCGGACACTTTTCTGGCAGGCAGCCACGCAGGATTTAT > CP009974/2509502‑2509800 | tGCGTGAAGAGCAGCCCAGGATCATCGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACAT < 2:5852735‑M1/151‑1 (MQ=255) cTTGAAGAGCAGCCCAGGATCATCGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATcc > 2:6064799‑M1/1‑149 (MQ=255) tGAAGAGCAGCCCAGGATCATCGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccgg > 2:4580298‑M1/1‑147 (MQ=255) gAAGAGCAGCCCAGGATCATCGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggt > 1:4743114‑M1/1‑146 (MQ=255) gAAGAGCAGCCCAGGATCATCGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggt > 2:2333223‑M1/1‑146 (MQ=255) agagCAGCCCAGGATCATCGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggctt > 2:424924‑M1/1‑144 (MQ=255) gagCAGCCCAGGATCATCGATGTCTCCAGCCAGCTTGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggtttt < 2:3817617‑M1/151‑9 (MQ=255) agcagcCCAGGATCATCGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACCTccggttttt > 1:6465426‑M1/1‑142 (MQ=255) agcagcCCAGGATCATCGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttt > 1:5937710‑M1/1‑142 (MQ=255) agcagcCCAGGATCATCGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttt > 1:2258156‑M1/1‑142 (MQ=255) cagcCCAGGATCATCGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttc < 2:624033‑M1/151‑12 (MQ=255) agcCCAGGATCATCGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttca < 1:2900271‑M1/151‑13 (MQ=255) cccAGGATCATCGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcagg > 2:5665198‑M1/1‑137 (MQ=255) cccAGGATCATCGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcagg < 2:1883306‑M1/151‑15 (MQ=255) cAGGATCATCGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggcc < 1:2526693‑M1/151‑17 (MQ=255) aGGATCATCGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggcca > 1:4783234‑M1/1‑134 (MQ=255) ggATCATCGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccat > 1:1743320‑M1/1‑133 (MQ=255) gATCATCGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatg < 1:4363659‑M1/151‑20 (MQ=255) tcatcGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggg < 1:5143484‑M1/151‑22 (MQ=255) tcatcGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggg > 1:3675902‑M1/1‑130 (MQ=255) catcGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatgggg > 1:4994376‑M1/1‑129 (MQ=255) atcGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggc > 1:5223784‑M1/1‑128 (MQ=255) tcGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggct < 1:1293244‑M1/151‑25 (MQ=255) cGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggtcttttcacgccatggggccg > 2:5925647‑M1/1‑126 (MQ=255) gATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctgg > 1:1052864‑M1/1‑125 (MQ=255) aTGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggt < 1:182527‑M1/151‑28 (MQ=255) tGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtc > 2:3548174‑M1/1‑123 (MQ=255) tGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtc < 2:4955626‑M1/151‑29 (MQ=255) ccagcTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggcc < 1:921813‑M1/151‑38 (MQ=255) ccagcTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggcc < 2:902633‑M1/151‑38 (MQ=255) cTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgc > 2:2043614‑M1/1‑110 (MQ=255) ggATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcag < 1:1537722‑M1/151‑44 (MQ=255) gATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagt > 2:1145027‑M1/1‑107 (MQ=255) gTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaa > 1:2343856‑M1/1‑99 (MQ=255) gCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtg > 1:963143‑M1/1‑95 (MQ=255) gCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcaggggcgcaaagggg > 1:5374229‑M1/1‑95 (MQ=255) tAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtc > 1:386749‑M1/1‑91 (MQ=255) gATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccaccc > 2:4982286‑M1/1‑86 (MQ=255) tCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaaca < 2:3727812‑M1/151‑70 (MQ=255) cGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacac > 1:4575955‑M1/1‑81 (MQ=255) cGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacac > 2:511406‑M1/1‑81 (MQ=255) gACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacact < 1:2681511‑M1/151‑72 (MQ=255) gACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacact > 2:2262286‑M1/1‑80 (MQ=255) aTGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactaca > 2:1710991‑M1/1‑77 (MQ=255) aaGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtc > 2:6379994‑M1/1‑73 (MQ=255) aaGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtc < 1:6379994‑M1/133‑61 (MQ=255) aGTGCCTTATGTCAATGCTACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatc > 2:2508039‑M1/1‑72 (MQ=255) tGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctt < 1:1010772‑M1/151‑82 (MQ=255) tGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctt > 1:5744837‑M1/1‑70 (MQ=255) cTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcg < 2:128526‑M1/151‑85 (MQ=255) cTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcg > 1:5511397‑M1/1‑67 (MQ=255) ttATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgc < 2:1844511‑M1/151‑86 (MQ=255) ttATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgc > 1:3259724‑M1/1‑66 (MQ=255) ttATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgc > 1:6146239‑M1/1‑66 (MQ=255) tATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcg < 1:146204‑M1/151‑87 (MQ=255) tCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgc < 1:113556‑M1/151‑91 (MQ=255) tCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgc > 1:3362346‑M1/1‑61 (MQ=255) aaTGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcac > 1:3491655‑M1/1‑59 (MQ=255) aTGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcact > 1:6066819‑M1/1‑58 (MQ=255) aTGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcact > 2:6098159‑M1/1‑58 (MQ=255) gCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcg > 2:5167756‑M1/1‑56 (MQ=255) gCCACCGTGAGCGTCTCGGGCATTGTCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcg < 2:2662635‑M1/151‑96 (MQ=255) ccACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgc > 1:3436809‑M1/1‑55 (MQ=255) cACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgcc < 1:2327663‑M1/151‑98 (MQ=255) ccTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccgg < 2:6490299‑M1/151‑100 (MQ=255) ttGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtc < 1:3091363‑M1/151‑102 (MQ=255) gAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcat > 1:402588‑M1/1‑48 (MQ=255) aGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatc > 2:4383671‑M1/1‑47 (MQ=255) gCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatcg < 1:3578714‑M1/151‑106 (MQ=255) gTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatcgtt > 1:487028‑M1/1‑44 (MQ=255) gTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatcgtt > 1:461969‑M1/1‑44 (MQ=255) gTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccaaccaacactacatgatctttcgcgatgcactcgccggtcatcgtt < 1:4932250‑M1/151‑108 (MQ=255) tctcGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatcgttt < 1:2049036‑M1/151‑109 (MQ=255) tcGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatcgtttgc < 1:6434927‑M1/151‑111 (MQ=255) tcGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatcgtttgc > 2:3702074‑M1/1‑41 (MQ=255) gggCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatcgtttgcgg < 2:3620854‑M1/151‑113 (MQ=255) gggCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatcgtttgcgg > 2:3927612‑M1/1‑39 (MQ=255) gCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatcgtttgcgggt > 2:1531399‑M1/1‑37 (MQ=255) cATTATCACTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatcgtttgcgggtg < 2:4712739‑M1/151‑116 (MQ=255) aTTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatcgtttgcgggtgg < 1:6134566‑M1/151‑117 (MQ=255) ttATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgacctttcgcgatgcactcgccggacatcgtttgcgggtggc > 2:3397716‑M1/1‑34 (MQ=255) tATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatcgtttgcgggtggcc < 2:5480906‑M1/151‑119 (MQ=255) tAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatcgtttgcgggtggccgcgcag > 2:1066244‑M1/1‑27 (MQ=255) aaTCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatcgtttgcgggtggccgcgcaga < 2:3078255‑M1/151‑126 (MQ=255) aTCGCACGACGACTACGGTCAACATccggtttttgcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatcgtttgcgggtggccgcgcagac < 2:4045644‑M1/151‑127 (MQ=255) gCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatcgtttgcgggtggccgcgcagacgca < 1:5440065‑M1/151‑130 (MQ=255) gCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatcgtttgcgggtggccgcgcagacgca > 2:2847625‑M1/1‑22 (MQ=255) cACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatcgtttgcgggtggccgcgcagacgcat < 1:821607‑M1/151‑131 (MQ=255) gacgacTACGGTCAACATcccgttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatcgtttgcgggtggccgcgcagacgcataat < 1:5656219‑M1/151‑134 (MQ=255) acgacTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatcgtttgcgggtggccgcgcagacgcataatc > 2:2180347‑M1/1‑17 (MQ=255) acgacTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatcgtttgcgggtggccgcgcagacgcataatc < 2:1410528‑M1/151‑135 (MQ=255) cgacTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatcgtttgcgggtggccgcgcagacgcataatct > 1:4069850‑M1/1‑16 (MQ=255) cgacTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatcgtttgcgggtggccgcgcagacgcataatct > 1:5993130‑M1/1‑16 (MQ=255) gacTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatcgtttgcgggtggccgcgcagacgcataatctg > 1:2771909‑M1/1‑15 (MQ=255) ggTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatcgtttgcgggtggccgcgcagacgcataatctgctgatg < 2:4513962‑M1/151‑143 (MQ=255) gccctgcATTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAGTGATTCCACGCTGATCCGGACACTCATTCCACGAGCATCCGGACACCGACTCCACGGTCATCCGGACACTTTTCTGGCAGGCAGCCACGCAgg < 1:3195359/145‑1 (MQ=14) aaCATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatcgtttgcgggtggccgcgcagacgcataatctgctgatgttct < 1:4435373‑M1/151‑147 (MQ=255) aaCATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatcgtttgcgggtggccgcgcagacgcataatctgctgatgttct < 2:3255996‑M1/151‑147 (MQ=255) aCATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatcgtttgcgggtggccgcgcagacgcataatctgctgatgttctg > 1:1646485‑M1/1‑4 (MQ=255) cATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatcgtttgcgggtggccgcgcagacgcataatctgctgatgttctgt > 2:2920447‑M1/1‑3 (MQ=255) | TGCTTGAAGAGCAGCCCAGGATCATCGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAGTGATTCCACGCTGATCCGGACACTCATTCCACGAGCATCCGGACACCGACTCCACGGTCATCCGGACACTTTTCTGGCAGGCAGCCACGCAGGATTTAT > CP009974/2509502‑2509800 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |