BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	CP009974	2,509,653	Δ2,602 bp		RPPX_11210–[RPPX_11220]	RPPX_11210, RPPX_11215, [RPPX_11220]

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	CP009974	2509653–2512250	2512254	5–2602	362 [4]	[0] 361	RPPX_11210–[RPPX_11220]	RPPX_11210,RPPX_11215,[RPPX_11220]

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009974	= 2509652	4 (0.010)	343 (1.090)	190/288	0.1	99.4%	intergenic (+3590/‑204)	RPPX_11200/RPPX_11210	beta‑aspartyl peptidase/integrase
*	?	CP009974	2512255 =	0 (0.000)	343 (1.090)	190/288	0.1	99.4%	coding (24/1236 nt)	RPPX_11220	hypothetical protein

Only 100 of 361 total aligned reads displayed.

ACGCAGAAATTGACGACGCCAGCCAACCCGGACTAACAATGCCACCCCTGCGTCGCTGCGCTCCGACTGCCTGTCCGAATGAGCGTGGAACAGGTGTCCGGATCAGCGTGGGCTGAGTGTCCGAATGGCGTGGAATCCGCACAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGCCGCGCAGACGCATAATCTGCTGATGTTCTGTGAC  >  CP009974/2512108‑2512405

tgaagagcagcccaggatcatcgatgtctccagccagctggagcgtctgttggctgtaaccgatatcgacatgcaagtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCgg                                                                                                                                                     <  2:4290289‑M2/4‑1 (MQ=255)

     agcagcccaggatcatcgatgtctccagccagctggatcgtctgttggctgtaaccgatatcgacatgcaagtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGttttt                                                                                                                                                >  1:5937710‑M2/143‑151 (MQ=255)

     agcagcccaggatcatcgatgtctccagccagctggatcgtctgttggctgtaaccgatatcgacatgcaagtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGttttt                                                                                                                                                >  1:2258156‑M2/143‑151 (MQ=255)

      gcagcccaggatcatcgatgtctccagccagctggatcgtctgttggctgtaaccgatatcgacatgcaagtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGtttttt                                                                                                                                               <  2:3595478‑M2/10‑1 (MQ=255)

        agcccaggatcatcgatgtctccagccagctggatcgtctgttggctgtaaccgatatcgacatgcaagtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCa                                                                                                                                             >  1:5173688‑M2/140‑151 (MQ=255)

        agcccaggatcatcgatgtctccagccagctggatcgtctgttggctgtaaccgatatcgacatgcaagtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCa                                                                                                                                             <  1:2900271‑M2/12‑1 (MQ=255)

          cccaggatcatcgatgtctccagccagctggatcgtctgttggctgtaaccgatatcgacatgcaagtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAgg                                                                                                                                           >  2:5665198‑M2/138‑151 (MQ=255)

          cccaggatcatcgatgtctccagccagctggatcgtctgttggctgtaaccgatatcgacatgcaagtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAgg                                                                                                                                           <  2:1882921‑M2/14‑1 (MQ=255)

              ggatcatcgatgtctccagccagctggatcgtctgttggctgtaaccgatatcgacatgcaagtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCAt                                                                                                                                       >  1:1743320‑M2/134‑151 (MQ=255)

              ggatcatcgatgtctccagccagctggatcgtctgttggctgtaaccgatatcgacatgcaagtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCAt                                                                                                                                       <  2:201316‑M2/18‑1 (MQ=255)

              ggatcatcgatgtctccagccagctggatcgtctgttggctgtaaccgatatcgacatgcaagtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTGTTTCAGGCCAt                                                                                                                                       >  2:4961837‑M2/134‑151 (MQ=255)

               gatcatcgatgtctccagccagctggatcgtctgttggctgtaaccgatatcgacatgcaagtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATg                                                                                                                                      >  1:6058230‑M2/133‑151 (MQ=255)

                    tcgatgtctccagccagctggatcgtctgttggctgtaaccgatatcgacatgcaagtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCt                                                                                                                                 <  1:1293244‑M2/24‑1 (MQ=255)

                      gatgtctccagccagctggatcgtctgttggctgtaaccgatatcgacatgcaagtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTgg                                                                                                                               >  1:1052864‑M2/126‑151 (MQ=255)

                       atgtctccagccagctggatcgtctgttggctgtaaccgatatcgacatgcaagtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGt                                                                                                                              <  1:182527‑M2/27‑1 (MQ=255)

                        tgtctccagccagctggatcgtctgttggctgtaaccgatatcgacatgcaagtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTc                                                                                                                             >  2:2856626‑M2/124‑151 (MQ=255)

                         gtctccagccagctggatcgtctgttggctgtaaccgatatcgacatgcaagtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactatggtcattatCTTGTTTTTACAGGCCATGGGGCTGGTCg                                                                                                                            <  1:4708831‑M2/29‑1 (MQ=255)

                           ctccagccagctggatcgtctgttggctgtaaccgatatcgacatgcaagtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAg                                                                                                                          >  2:4547743‑M2/121‑151 (MQ=255)

                           ctccagccagctggatcgtctgttggctgtaaccgatatcgacatgcaagtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAg                                                                                                                          <  1:3162041‑M2/31‑1 (MQ=255)

                             ccagccagctggatcgtctgttggctgtaaccgatatcgacatgcaagtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCt                                                                                                                        >  2:5053306‑M2/119‑151 (MQ=255)

                                 ccagctggatcgtctgttggctgtaaccgatatcgacatgcaagtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGcc                                                                                                                    >  1:5587440‑M2/115‑151 (MQ=255)

                                 ccagctggatcgtctgttggctgtaaccgatatcgacatgcaagtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGcc                                                                                                                    <  2:902633‑M2/37‑1 (MQ=255)

                                       ggatcgtctgttggctgtaaccgatatcgacatgcaagtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAg                                                                                                              <  1:1537722‑M2/43‑1 (MQ=255)

                                        gatcgtctgttggctgtaaccgatatcgacatgcaagtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGt                                                                                                             >  2:1145027‑M2/108‑151 (MQ=255)

                                                gttggctgtaaccgatatcgacatgcaagtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCaaa                                                                                                     >  1:2343856‑M2/100‑151 (MQ=255)

                                                   ggctgtaacctatatcgacatgcaagtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGt                                                                                                  <  2:5877437‑M2/55‑1 (MQ=255)

                                                    gctgtaaccgatatcgacatgcaagtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTg                                                                                                 >  1:963143‑M2/96‑151 (MQ=255)

                                                    gctgtaaccgatatcgacatgcaagtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGGGGCGCAaagggg                                                                                                 >  1:5374229‑M2/96‑149 (MQ=255)

                                                             gatatcgacatgcaagtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCAccc                                                                                        <  1:6066954‑M2/65‑1 (MQ=255)

                                                             gatatcgacatgcaagtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCAccc                                                                                        >  2:614013‑M2/87‑151 (MQ=255)

                                                              atatcgacatgcaagtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCa                                                                                       >  1:5746308‑M2/86‑151 (MQ=255)

                                                               tatcgacatgcaagtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCaa                                                                                      <  1:545561‑M2/67‑1 (MQ=255)

                                                                atcgacatgcaagtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAac                                                                                     >  1:4416329‑M2/84‑151 (MQ=255)

                                                                 tcgacatgcaagtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAaca                                                                                    <  2:3727812‑M2/69‑1 (MQ=255)

                                                                  cgacatgcaagtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAacac                                                                                   <  2:4681869‑M2/70‑1 (MQ=255)

                                                                   gacatgcaagtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACt                                                                                  >  2:2262286‑M2/81‑151 (MQ=255)

                                                                   gacatgcaagtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACt                                                                                  <  1:2681511‑M2/71‑1 (MQ=255)

                                                                          aagtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTc                                                                                             <  1:6379994‑M2/60‑1 (MQ=255)

                                                                           agtgccttatgtcaatgctaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATc                                                                          >  2:2508039‑M2/73‑151 (MQ=255)

                                                                           agtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATc                                                                          >  1:5032329‑M2/73‑151 (MQ=255)

                                                                            gtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCt                                                                         <  1:4014049‑M2/80‑1 (MQ=255)

                                                                             tgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCtt                                                                        >  1:5277010‑M2/71‑151 (MQ=255)

                                                                             tgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCtt                                                                        <  1:1010772‑M2/81‑1 (MQ=255)

                                                                                cttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTcg                                                                     <  1:4959718‑M2/84‑1 (MQ=255)

                                                                                cttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTcg                                                                     <  1:4038464‑M2/84‑1 (MQ=255)

                                                                                 ttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTcgc                                                                    <  2:1844511‑M2/85‑1 (MQ=255)

                                                                                  tatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTcgcg                                                                   >  1:3445456‑M2/66‑151 (MQ=255)

                                                                                  tatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTcgcg                                                                   <  1:146204‑M2/86‑1 (MQ=255)

                                                                                  tatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTcgcg                                                                   <  2:6253274‑M2/86‑1 (MQ=255)

                                                                                      tcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGc                                                               >  2:1702565‑M2/62‑151 (MQ=255)

                                                                                      tcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGc                                                               <  1:113556‑M2/90‑1 (MQ=255)

                                                                                           gccaccgtgagcgtctcgggcattgtcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCg                                                          <  2:2662635‑M2/95‑1 (MQ=255)

                                                                                             caccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGcc                                                        <  1:2327663‑M2/97‑1 (MQ=255)

                                                                                             caccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGcc                                                        <  1:3548174‑M2/97‑1 (MQ=255)

                                                                                              accttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCg                                                       >  2:2357668‑M2/54‑151 (MQ=255)

                                                                                              accttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCg                                                       >  2:1265110‑M2/54‑151 (MQ=255)

                                                                                               ccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCgg                                                      <  2:6490299‑M2/99‑1 (MQ=255)

                                                                                                 ttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTc                                                    <  1:3091363‑M2/101‑1 (MQ=255)

                                                                                                   gagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTCCGCGATGCCTTCGCCGCTCAt                                                  >  2:5316511‑M2/49‑151 (MQ=255)

                                                                                                       gtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTTGCGATGCACTCGCCGGTCATCGtt                                              >  1:629426‑M2/45‑151 (MQ=255)

                                                                                                       gtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGtt                                              >  1:4490262‑M2/45‑151 (MQ=255)

                                                                                                       gtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGG‑TTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGttt                                             <  2:4740479‑M2/107‑1 (MQ=255)

                                                                                                        tgtcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGttt                                             <  2:6012379‑M2/108‑1 (MQ=255)

                                                                                                        tctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGGCCTGCAGTGGCGCACAGGTGCGTCCACCCAACACGTCATGATCTTTCGCGATGCAGTCCCCGGTCATCGttt                                             >  2:5115668‑M2/44‑151 (MQ=255)

                                                                                                        tctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGttt                                             <  1:2049036‑M2/108‑1 (MQ=255)

                                                                                                         ctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTg                                            >  1:3822853‑M2/43‑151 (MQ=255)

                                                                                                          tcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGc                                           <  1:6434927‑M2/110‑1 (MQ=255)

                                                                                                          tcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGc                                           >  2:3702074‑M2/42‑151 (MQ=255)

                                                                                                           cgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCg                                          <  2:6066819‑M2/111‑1 (MQ=255)

                                                                                                           cgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCg                                          >  2:3975704‑M2/41‑151 (MQ=255)

                                                                                                           cgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCg                                          <  1:3670875‑M2/111‑1 (MQ=255)

                                                                                                            gggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCgg                                         >  1:3408216‑M2/40‑151 (MQ=255)

                                                                                                            gggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCgg                                         <  2:3620854‑M2/112‑1 (MQ=255)

                                                                                                                attatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTgg                                     <  1:6134566‑M2/116‑1 (MQ=255)

                                                                                                                 ttatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGACCTTTCGCGATGCACTCGCCGGACATCGTTTGCGGGTGGc                                    >  2:3397716‑M2/35‑151 (MQ=255)

                                                                                                                  tatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGcc                                   <  2:5480906‑M2/118‑1 (MQ=255)

                                                                                                                  tatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGcc                                   <  1:716857‑M2/118‑1 (MQ=255)

                                                                                                                  tatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGcc                                   >  2:3838232‑M2/34‑151 (MQ=255)

                                                                                                                    tcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGCcgc                                 <  1:4254607‑M2/120‑1 (MQ=255)

                                                                                                                        taatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGCCGCGCAg                             >  2:4444205‑M2/28‑151 (MQ=255)

                                                                                                                        taatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGCCGCGCAg                             >  2:1066244‑M2/28‑151 (MQ=255)

                                                                                                                         aatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGCCGCGCAGa                            <  2:3078255‑M2/125‑1 (MQ=255)

                                                                                                                            cgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGCCGCGCAGACGc                         <  1:45913‑M2/128‑1 (MQ=255)

                                                                                                                              cacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGCCGCGCAGACGCAt                       <  1:821607‑M2/130‑1 (MQ=255)

                                                                                                                                cgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGCCGCGCAGACGCATaa                     <  2:6417026‑M2/132‑1 (MQ=255)

                                                                                                                                 gacgactacggtcaacatCCCGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGCCGCGCAGACGCATAAt                    <  1:5656219‑M2/133‑1 (MQ=255)

                                                                                                                                  acgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGCCGCGCAGACGCATAATc                   >  1:948655‑M2/18‑151 (MQ=255)

                                                                                                                                  acgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGCCGCGCAGACGCATAATc                   >  2:2180347‑M2/18‑151 (MQ=255)

                                                                                                                                  acgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGCCGCGCAGACGCATAATc                   <  2:1410528‑M2/134‑1 (MQ=255)

                                                                                                                                    gactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGCCGCGCAGACGCATAATctg                 <  1:2508039‑M2/136‑1 (MQ=255)

                                                                                                                                    gactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGCCGCGCAGACGCATAATctg                 >  1:2771909‑M2/16‑151 (MQ=255)

                                                                                                                                    gactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGCCGCGCAGACGCATAATctg                 >  1:330017‑M2/16‑151 (MQ=255)

                                                                                                                                     actacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGCCGCGCAGACGCATAATctgc                <  1:4908486‑M2/137‑1 (MQ=255)

                                                                                                                                     acgacggtcaacatCCGGGTTTTTCGGGCCATGGGGGTGGTTGAGCTGGCTCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGCCGCGCAGACGCATAATctgc                <  2:4058154‑M2/137‑1 (MQ=255)

                                                                                                                                             caacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGCCGCGCAGACGCATAATCTGCTGATGTTc        >  1:4837610‑M2/7‑151 (MQ=255)

                                                                                                                                              aacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGCCGCGCAGACGCATAATCTGCTGATGTTCt       <  2:3255996‑M2/146‑1 (MQ=255)

                                                                                                                                              aacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGCGGCCGCGCCGACGCATAATCTGCTGATGTTCt       >  1:4768187‑M2/6‑151 (MQ=255)

                                                                                                                                               acatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGCcgc                                 >  2:1512712‑M2/5‑124 (MQ=255)

                                                                                                                                               acatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGCCGCGCAGACGCATAATCTGCTGATGTTCtg      >  1:1646485‑M2/5‑151 (MQ=255)

                                                                                                                                                catCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGCCGCGCAGACGCATAATCTGCTGATGTTCtgt     >  2:2920447‑M2/4‑151 (MQ=255)

ACGCAGAAATTGACGACGCCAGCCAACCCGGACTAACAATGCCACCCCTGCGTCGCTGCGCTCCGACTGCCTGTCCGAATGAGCGTGGAACAGGTGTCCGGATCAGCGTGGGCTGAGTGTCCGAATGGCGTGGAATCCGCACAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGCCGCGCAGACGCATAATCTGCTGATGTTCTGTGAC  >  CP009974/2512108‑2512405

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`