| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | CP009974 | 2,756,352 | Δ2,603 bp | [RPPX_12250]–RPPX_12260 | [RPPX_12250], RPPX_12255, RPPX_12260 | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | CP009974 | 2756352–2758948 | 2758954 | 7–2603 | 330 [0] | [0] 328 | [RPPX_12250]–RPPX_12260 | [RPPX_12250],RPPX_12255,RPPX_12260 |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009974 | = 2756351 | 0 (0.000) | 309 (0.990) | 189/286 | 0.1 | 100% | coding (13/318 nt) | RPPX_12250 | hypothetical protein |
| ? | CP009974 | 2758955 = | 0 (0.000) | intergenic (‑211/‑1459) | RPPX_12260/RPPX_12270 | integrase/membrane protein | |||||
Only 100 of 328 total aligned reads displayed.
GCGTGGCTGCCTGCCAGAAAAGTGTCCGGATGACCGTGGAGTCGGTGTCCGGATGCTCGTGGAATGAGTGTCCGGATCAGCGTGGAATCACTGTCCGGATGCGCGTGGAATGGGTGTCCGAGTCAGCGTGGAATCCGCAAACCGTCGCCAATGACGGCGATGACTTGTCGTTCGGGTTCTGCGAGTTGCACCCCAATTGCTGCAGGCAGGGCGAAGCCCAGTCCACCAGCGGCACAGAAGTAATAGCTACCAGGGTTGCGCATGTTCAGGCGCTGCCACATTTGGGCGGTCGTTGAA > CP009974/2758809‑2759105 | agcccgggaacgttttctgcttcgagaacgccggcaaaccatcgcaacgcaccgtatgtgccattgttcatgatcacgaagatggtggggatgttgtactgcgctgcagtccacaacgcactgatgctgtagttcgccgaaccgtcGCCaa < 2:3355465‑M2/5‑1 (MQ=255) cgggcacgttttctgcttcgagaacgccggcaaaccatcgcaacgcaccgtatgtgccattgttcatgatcacgaagatggtggggatgttgtactgcgctgcagtccacaacgcactgatgctgtagttcgccgaaccgtcGCCAATGAc > 1:1317709‑M2/143‑151 (MQ=255) gggaacgttttctgcttcgagaacgccggcaaaccatcgcaacgcaccgtatgtgccattgttcatgatcacgaagatggtggggatgttgtactgcgctgcagtccacaacgcactgatgctgtagttcgccgaaccgtcGCCAATGACg > 2:3691503‑M2/142‑151 (MQ=255) gggaacgttttctgcttcgagaacgccggcaaaccatcgcaacgcaccgtatgtgccattgttcatgatcacgaagatggtggggatgttgtactgcgctgcagtccacaacgcactgatgctgtagttcgccgaaccgtcGCCAATGACg < 1:2486151‑M2/10‑1 (MQ=255) gaacgttttctgcttcgagaacgccggcacaccatcgcaacgcaccgtatgtgccattgttcatgatcacgaagatggtggggatgttgtactgcgctgcagtccacaacgcactgatgctgtagttcgccgaaccgtcGCCAATGACGGc < 2:5818219‑M2/12‑1 (MQ=255) gaacgttttctgcttcgagaacgccggcaaaccatcgcaacgcaccgtatgtgccattgttcatgatcacgaagatggtggggatgttgtactgcgctgcagtccacaacgcactgatgctgtagttcgccgaaccgtcGCCAATGACGGc < 2:1425100‑M2/12‑1 (MQ=255) gaacgttttctgcttcgagaacgccggcaaaccatcgcaacgcaccgtatgtgccattgttcatgatcacgaagatggtggggatggtgtactgcgctgcgctccacaacgcactgatgctgtagttcgccgaaccgtcGCCAATGACGGc > 2:6269179‑M2/140‑151 (MQ=255) acgttttctgcttcgagaacgccggcaaaccatcgcaacgcaccgtatgtgccattgttcatgatcacgaagatggtggggatgttgtactgcgctgcagtccacaacgcactgatgctgtagttcgccgaaccgtcGCCAATGACGGCGa > 1:5297507‑M2/138‑151 (MQ=255) gttttctgcttcgagaacgccggcaaaccatcgcaacgcaccgtatgtgccattgttcatgatcacgaagatggtggggatgttgtactgcgctgcagtccacaacgcactgatgctgtagttcgccgaaccgtcGCCAATGACGGCGATg > 2:2429193‑M2/136‑151 (MQ=255) tttctgcttcgagaacgccggcaaaccatcgcaacgcaccgtatgtgccattgttcatgatcacgaagatggtggggatgttgtactgcgctgcagtccacaacgcactgatgctgtagttcgccgaaccgtcGCCAATGACGGCGATGAc < 1:2400145‑M2/18‑1 (MQ=255) ttctgcttcgagaacgccggcaaaccatcgcaacgcaccgtatgtgccattgttcatgatcacgaagatggtggggatgttgtactgcgctgcagtccacaacgcactgatgctgtagttcgccgaaccgtcGCCAATGACGGCGATGACt < 1:4831348‑M2/19‑1 (MQ=255) cttcgagaacgccggcaaaccatcgcaacgcaccgtatgtgccattgttcatgatcacgaagatggtggggatgttgtactgcgctgcagtccacaacgcactgatgctgtagttcgccgaaccgtcGCCAATGACGGCGATGACTTGTCg < 1:1873461‑M2/24‑1 (MQ=255) ttcgagaacgccggcaaaccatcgcaacgcaccgtatgtgccattgttcatgatcacgaagatggtggggatgttgtactgcgctgcagtccacaacgcactgatgctgtagttcgccgaaccgtcGCCAATGACGGCGATGACTTGTCGt < 2:1265133‑M2/25‑1 (MQ=255) gagaacgccggcaaaccatcgcaacgcaccgtatgtgccattgttcatgatcacgaagatggtggggatgttgtactgcgctgcagtccacaacgcactgatgctgtagttcgccgaaccgtcGCCAATGACGGCGATGACTTGTCGTTCg > 2:5418233‑M2/124‑151 (MQ=255) agaacgccggcaaaccatcgcaacgcaccgtatgtgccattgttcatgatcacgaagatggtggggatgttgtactgcgctgcagtccacaacgcactgatgctgtagttcgccgaaccgtcGCCAATGACGGCGATGACTTg < 1:819018‑M2/21‑1 (MQ=255) agaacgccggcaaaccaccgcaacgcaccgtatgtgccattgttcatgatcacgaagatggtggggatgttgtactgcgctgcagtccacaacgcactgatgctgtagttcgccgaaccgtcGCCAATGACGGCGATGACTTGTCGTTCgg < 2:3007856‑M2/29‑1 (MQ=255) acgccggcaaaccatcgcaacgcaccgtatgtgccattgttcatgatcacgaagatggtggggatgttgtactgcgctgcagtccacaacgcactgatgctgtagttcgccgaaccgtcGCCAATGACGGCGATGACTTGTCGTTCGGGtt < 1:5825220‑M2/32‑1 (MQ=255) cgccggcaaaccatcgcaacgcaccgtatgtgccattgttcatgatcacgaagatggtggggatgttgtactgcgctgcagtccacaacgcactgatgctgtagttcgccgaaccgtcGCCAATGACGGCGATGACTTGTCGTTCGGGTTc < 1:424341‑M2/33‑1 (MQ=255) ccggcaaaccatcgcaacgcaccgtatgtgccattgttcatgatcacgaagatggtggggatgttgtactgcgctgcagtccacaacgcactgatgctgtagttcgccgaaccgtcGCCAATGACGGCGATGACTTGTCGTTCGGGTTCTg < 2:1665260‑M2/35‑1 (MQ=255) ccggcaaaccatcgcaacgcaccgtatgtgccattgttcatgatcacgaagatggtggggatgttgtactgcgctgcagtccacaacgcactgatgctgtagttcgccgaaccgtcGCCAATGACGGCGATGACTTGTCGTTCGGGTTCTg < 2:263622‑M2/35‑1 (MQ=255) ggcaaaccatcgcaacgcaccgtatgtgccattgttcatgatcacgaagatggtggggatgttgtactgcgctgcagtccacaacgcactgatgctgtagttcgccgaaccgtcGCCAATGACGGCGATGACTTGTCGTTCGGGTTCTGCg > 2:918378‑M2/115‑151 (MQ=255) gcaaaccatcgcaacgcaccgtatgtgccattgttcatgatcacgaagatggtggggatgttgtactgcgctgcagtccacaacgcactgatgctgtagttcgccgaaccgtcGCCAATGACGGCGATGACTTGTCGTTCGGGTTCTGCGa > 2:2580875‑M2/114‑151 (MQ=255) aaccatcgcaacgcaccgtatgtgccattgttcatgatcacgaagatggtggggatgttgtactgcgctgcagtccacaacgcactgatgctgtagttcgccgaaccgtcGCCACTGACGGCGATGACTTGTCGTTCGGGttctgctcgtt > 2:4098890‑M2/111‑146 (MQ=255) aaccatcgcaacgcaccgtatgtgccattgttcatgatcacgaagatggtggggatgttgtactgcgctgcagtccacaacgcactgatgctgtagttcgccgaaccgtcGCCAATGACGGCGATGACTTGTCGTTCGGGTTCTGCGAGtt < 1:1599679‑M2/41‑1 (MQ=255) accatcgcaacgcaccgtatgtgccattgttcatgatcacgaagatggtggggatgttgtactgcgctgcagtccacaacgcactgatgctgtagttcgccgaaccgtcGCCAATGACGGCGATGACTTGTCGTTCGGGTTCTGCGAGTTg > 2:1382748‑M2/110‑151 (MQ=255) catcgcaacgcaccgtatgtgccattgttcatgatcacgaagatggtggggatgttgtactgcgctgcagtccacaacgcactgatgctgtagttcgccgaaccgtcGCCGATGACGGCGATGACTTGTCGTTCGGGTTCTGCGAGTTGCa > 2:4993626‑M2/108‑151 (MQ=255) catcgcaacgcaccgtatgtgccattgttcatgatcacgaagatggtggggatgttgtactgcgctgcagtccacaacgcactgatgctgtagttcgccgaaccgtcGCCAATGACGGCGATGACTTGTCGTTCGGGTTCTGCGa > 1:1142789‑M2/108‑145 (MQ=255) catcgcaacgcaccgtatgtgccattgttcatgatcacgaagatggtggggatgttgtactgcgctgcagtccacaacgcactgatgctgtagttcgccgaaccgtcGCCAATGACGGCGATGACTTGTCGTTCGGGTTCTGCGa < 2:1142789‑M2/38‑1 (MQ=255) catcgcaacgcaccgtatgtgccattgttcatgatcacgaagatggtggggatgttgtactgcgctgcagtccacaacgcactgatgctgtagttcgccgaaccgtcGCCAATGACGGCGATGACTTGTCGTTCGGGTTCTGCGAGTTGCa > 2:521902‑M2/108‑151 (MQ=255) tcgcaacgcaccgtatgtgccattgttcatgatcacgaagatggtggggatgttgtactgcgctgcagtccacaacgcactgatgctgtagttcgccgaaccgtcGCCAATGACGGCGATGACTTGTCGTTCGGGTTCTGCGAGTTGCAcc < 2:2059739‑M2/46‑1 (MQ=255) tcgcaacgcaccgtatgtgccattgttcatgatcacgaagatggtggggatgttgtactgcgctgcagtccacaacgcactgatgctgtagttcgccgaaccgtcGCCAATGACGGCGATGACTTGTCGTTCGGGTTCTGCGAGTTGCAcc < 2:4580794‑M2/46‑1 (MQ=255) caacgcaccgtatgtgccattgttcatgatcacgaagatggtggggatgttgtactgcgctgcagtccacaacgcactgatgctgtagttcgccgaaccgtcGCCAATGACGGCGATGACTTGTCGTTCGGGTTCTGCGAGTTGCACCCCa > 1:3825352‑M2/103‑151 (MQ=255) acgcaccgtatgtgccattgttcatgatcacgaagatggtggggatgttgtactgcgctgcagtccacaacgcactgatgctgtagttcgccgaaccgtcGCCAATGACGGCGATGACTTGTCGTTCGGGTTCTGCGAGTTGCCCCCCAAt > 2:5556690‑M2/101‑151 (MQ=255) acgcaccgtatgtgccattgttcatgatcacgaagatggtggggatgttgtactgcgctgcagtccacaacgcactgatgctgtagttcgccgaaccgtcGCCAATGACGGCGATGACTTGTCGTTCGGGTTCTGCGAGTTGCACCCCAAt > 1:6229538‑M2/101‑151 (MQ=255) cgcaccgtatgtgccattgttcatgatcacgaagatggtggggatgttgtactgcgctgcagtccacaacgcactgatgctgtagttcgccgaaccgtcGCCAATGACGGCGATGACTTGTCGTTCGGGTTCTGCGAGTTGCACCCCAAtt < 2:308801‑M2/52‑1 (MQ=255) ccgtatgtgccattgttcatgatcacgaagatggtggggatgttgtactgcgctgcagtccacaacgcactgatgctgtagttcgccgaaccgtcGCCAATGACGGCGATGACTTGTCGTTCGGGTTCTGCGAGTTGCACCCCAATtgctg < 1:5234477‑M2/56‑1 (MQ=255) cgtatgtgccattgttcatgatcacgaagatggtggggatgttgtactgcgctgcagtccacaacgcactgatgctgtagttcgccgaaccgtcGCCAATGACGGCGATGACTTGTCGTTCGGGTTCTGCGAGTTGCACCCCAATtgctgc < 1:5037158‑M2/57‑1 (MQ=255) gtatgtgccattgttgatgatcacggagatggtggggagggtgtactgcgctgcagtgcacagcgcactgatgctgtagttcggcgaaccgtgGCCAATGACGGCGATGACTTGTCGTTCGGGTTCTGCGAGTTGCACCCCAATTGCTgca < 2:6166045‑M2/58‑1 (MQ=255) gtatgtgccattgttcatgatcacgaagatggtggggatgttgtactgcgctgcagtccacaacgcactgatgctgtagttcgccgaaccgtcGCCAATGACGGCGATGACTTGTCGTTCGGGTTCTGCGAGTTGCACCCCAATTGCTgca > 1:5967162‑M2/94‑151 (MQ=255) tgtgccattgttcatgatcacgaagatggtggggatgttgtactgcgctgcagtccacaacgcactgatgctgtagttcgccgaaccgtcGCCAATGACGGCGATGACTTGTCGTTCGGGTTCTGCGAGTTGCACCCCAATTGCTgcaggc > 1:5223483‑M2/91‑151 (MQ=255) gtgccattgttcatgatcacgaagatggtggggatgttgtactgcgctgcagtccacaacgcactgatgctgtagttcgccgaaccgtcGCCAATGACGGCGATGACTTGTCGTTCGGGTTCTGCGAGTTGCACCCCAATTGCTgcaggca < 1:6105204‑M2/62‑1 (MQ=255) attgttcatgatcacgaagatggtggggatgttgtactgcgctgcagtgcacaacgcactgatgctgtagttcgccgaaccgtcGCCACTGCCGGCGATGCCTTGTCGTTCGGGTTCTGCGGGTTGCACCCCAAGCGCTGCAGGCAGGgcc > 2:4456552‑M2/85‑150 (MQ=255) ttgttcatgatcacgaagatggtggggatgttgtactgcgctgcagaccacaacgcactgatgctgtagttcgccgaaccgtcGCCAATGACGGCGATGACTTGTCGTTCGGGTTCTGCGAGTTGCACCCCAATTGCTGCAGGCAGGGCGa < 2:4658965‑M2/68‑1 (MQ=255) gttcatgatcacgaagatggtggggatgttgtactgcgctgcagtccacaacgcactgatgctgtagttcgccgaaccgtcGCCAATGACGGCGATGACTTGTCGTTCGGGTTCTGCGAGTTGCACCCCAATTGCTGCAGGCAGGGCGAAg > 1:2222932‑M2/82‑151 (MQ=255) gttcatgatcacgaagatggtggggatgttgtactgcgctgcagtccacaacgcactgatgctgtagttcgccgaaccgtcGCCAATGACGGCGATGACTTGTCGTTCGGGTTCTGCGAGTTGCACCCCAATTGCTGCAGGCAGGGCGAAg > 2:5155722‑M2/82‑151 (MQ=255) ttcatgatcacgaagatggtggggatgttgtactgcgctgcagtccacaacgcactgatgctgtagttggccgaaccgtcGCCAATGACGGCGATGACTTGTCGTGCGGGTTCTGCGAGTTGCACCCCAATTGCTGCCGGCAGGGcgaacc > 1:2594956‑M2/81‑149 (MQ=255) ttcatgatcacgaagatggtggggatgttgtactgcgctgcagtccacaacgcactgatgctgtagttcgccgaaccgtcGCCAATGACGGCGATGACTTGTCGTTCGGGTTCTGCGAGTTGCACCCCAATTCCTGCAGGCAGGGCGAAGc > 2:4528694‑M2/81‑151 (MQ=255) tcatgatcacgaagatggtggggatgttgtactgcgctgcagtccacaacgcactgatgctgtagttcgccgaaccgtcGCCAATGACGGCGATGACTTGTCGTTCGGGTTCTGCGAGTTGCACCCCAATTGCTGCAGGCAGGGCGAAGcc > 1:49647‑M2/80‑151 (MQ=255) tcatgatcacgaagatggtggggatgttgtactgcgctgcagtccacaacgcactgatgctgtagttcgccgaaccgtcGCCAATGACGGCGATGACTTGTCGTTCGGGTTCTGCGAGTTGCACCCCAATTGCTGCAGGCAGGGCGAAGcc < 2:2335859‑M2/72‑1 (MQ=255) catgatcacgaagatggtggggatgttgtactgcgctgcagtccacaacgcactgatgctgtagttcgccgaaccgtcGCCAATGACGGCGATGACTTGTCGTTCGGGTTCTGCGAGTTGCACCCCAATTGCTGCAGGCAGGGCGAAGccc < 1:4138462‑M2/73‑1 (MQ=255) atcacgaagatggtggggatgttgtactgcgctgcagtccacaacgcactgatgctgtagttcgccgaaccgtcGCCAATGACGGCGATGACTTGTCGTTCGGGTTCTGCGAGTTGCACCCCAATTGCTGCAGGCAGGGCGAAGCCCAGTc > 1:3085303‑M2/75‑151 (MQ=255) atcacgaagatggtggggatgttgtactgcgctgcagtccacaacgcactgatgctgtagttcgccgaaccgtcGCCAATGACGGCGATGACTTGTCGTTCGGGTTCTGCCAGGTGCACCCCAATTGCTGCAGGCAGGGCGCAGCCCAGTc > 2:5897406‑M2/75‑151 (MQ=255) acgaagatggtggggatgttgtactgcgctgcagtccacaacgcactgatgctgtagttcgccgaaccgtcGCCAATGACGGCGATGACTTGTCGTTCGGGTTCTGCGAGTTGCACCCCAATTGCTGCAGGCAGGGCGAAGCCCAGTccac < 1:2040312‑M2/80‑1 (MQ=255) cgaagatggtggggatgttgtactgcgctgcagtccacaacgcactgatgctgtagttcgccgaaccgtcGCCAATGACGGCGATGACTTGTCGTTCGGGTTCTGCGAGTTGCACCCCAATTGCTGCAGGCAGGGCGAAGCCCAGTccacc < 1:1763065‑M2/81‑1 (MQ=255) cgaagatggtggggatgttgtactgcgctgcagtccacaacgcactgatgctgtagttcgccgaaccgtcGCCAATGACGGCGATGACTTGTCGTTCGGGTTCTGCGAGTTGCACCCCAATTGCTGCAGGCAGGGCGAAGCCCAGTccacc > 2:2145850‑M2/71‑151 (MQ=255) gaagatggtggggatgttgtactgcgctgcagtccacaacgcactgatgctgtagttcgccgaaccgtcGCCAATGACGGCGATGACTTGTCGTTCGGGTTCTGCGAGTTGCACCCCAATTGCTGCAGGCAGGGCGAAGCCCAGTccacca > 1:4742108‑M2/70‑151 (MQ=255) agatggtggggatgttgtactgcgctgcagtccacaacgcactgatgctgtagttcgccgaaccgtcGCCAATGACGGCGATGACTTGTCGTTCGGGTTCTGCGAGTTGCACCCCAATTGCTGCAGGCAGGGCGAAGCCCAGTCCACCAGc > 2:6526704‑M2/68‑151 (MQ=255) gatggtggggatgttgtactgcgctgcagtccacaacgcactgatgctgtagttcgccgaaccgtcGCCAATGACGGCGATGACTTGTCGTTCGGGTTCTGCGAGTTGCACCCCAATTGCTGCAGGCAGGGCGAAGCCCAGTCCACCAGCg > 1:762068‑M2/67‑151 (MQ=255) atggtggggatgttgtactgcgctgcagtccacaacgcactgatgctgtagttcgccgaaccgtcGCCAATGACGGCGATGACTTGTCGTTCGGGTTCTGCGAGTTGCACCCCAATTGCTGCAGGCAGGGCGAAGCCCAGTCCACCAGCgg > 1:668556‑M2/66‑151 (MQ=255) tggggatgttgtactgcgctgcagtccacaacgcactgatgctgtagttcgccgaaccgtcGCCAATGACGGCGATGACTTGTCGTTCGGGTTCTGCGAGTTGCACCCCAATTGCTGCAGGCAGGGCGAAGCCCAGTCCACCAGCGGcaca > 2:2787645‑M2/62‑151 (MQ=255) ggggatgttgtactgcgctgcagtccacaacgcactgatgctgtagttcgccgaaccgtcGCCAATGACGGCGATGACTTGTCGTTCGGGTTCTGCGAGTTGCACCCCAATTGCTGCAGGCAGGGCGAAGCCCAGTCCACCAGCGGCACAg > 2:6340373‑M2/61‑151 (MQ=255) ggggatgttgtactgcgctgcagtccacaacgcactgatgctgtagttcgccgaaccgtcGCCAATGACGGCGATGACTTGTCGTTCGGGTTCTGCGAGTTGCACCCCAATTGCTGCAGGCAGGGCGAAGCCCAGTCCACCAGCGGCACAg < 2:3212618‑M2/91‑1 (MQ=255) ggggatgttgtactgcgctgcagtccacaacgcactgatgctgtagttcgccgaaccgtcGCCAATGACGGCGATGACTTGTCGTTCGGGTTCTGCGAGTTGCACCCCAATTGCTGCAGGCAGGGCGAAGCCCAGACCACCAGCGGCACAg < 2:3256337‑M2/91‑1 (MQ=255) gggatgttgtactgcgctgcagtccacaacgcactgatgctgtagttcgccgaaccgtcGCCAATGACGGCGATGACTTGTCGTTCGGGTTCTGCGAGTTGCACCCCAATTGCTGCAGGCAGGGCGAAGCCCAGTCCACCAGCGGCACAGa > 1:3307765‑M2/60‑151 (MQ=255) gggatgttgtactgcgctgcagtccacaacgcactgatgctgtagttcgccgaaccgtcGCCAATGACGGCGATGACTTGTCGTTCGGGTTCTGCGAGTTGCACCCCAATTGCTGCAGGCAGGGCGAAGCCCAGTCCACCAGCGGCACAGa < 1:3895126‑M2/92‑1 (MQ=255) gggatgttgtactgcgctgcagtccacaacgcactgatgctgtagttcgccgaaccgtcGCCAATGACGGCGATGACTTGTCGTTCGGCTTCTGCGAGTTGCACCCCAATTGCTGCAGGCAGGGCGAAGCCCAGGCCACCAGCGGCACGGa > 2:1760595‑M2/60‑151 (MQ=255) tgttgtactgcgctgcagtccacaacgcactgatgctgtagttcgccgaaccgtcGCCAATGACGGCGATGACTTGTCGTTCGGGTTCTGCGAGTTGCACCCCAATTGCTGCAGGCAGGGCGAAGCCCAGTCCACCAGCGGCACAGAAGTa < 1:3625172‑M2/96‑1 (MQ=255) gttgtacggcgctgcagtccacaacgaagtgatgctgtagttcgccgaaccgtcGCCAATGACGGCGATGACTTGTCGTTCGGGTTCTGCGAGTTGCACCCCAATTGCTGCAGGCAGGGCGAAGCCCAGTCCACCAGCGGCACAGAAGTaa < 2:855237‑M2/97‑1 (MQ=255) ttgtactgcgctgcagtccacaacgcactgatgctgtagttcgccgaaccgtcGCCAATGACGGCGATGACTTGTCGTTCGGGTTCTGCGAGTTGCACCCCAATTGCTGCAGGCAGGGCGAAGCCCAGTCCACCAGCGGCACAGAAGTAAt < 2:682580‑M2/98‑1 (MQ=255) ttgtactgcgctgcagtccacaacgcactgatgctgtagttcgccgaaccgtcGCCAATGACGGCGATGACTTGTCGTTCGGGTTCTGCGAGTTGCACCCCAATTGCTGCAGGCAGGGCGAAGCCCAGTCCACCAGCGGCACAGAAGTAAt > 1:3686522‑M2/54‑151 (MQ=255) tgtactgcgctgcagtccacaacgcactgatgctgtagttcgccgaaccgtcGCCAATGACGGCGATGACTTGTCGTTCGGGTTCTGCGAGTTGCACCCCAATTGCTGCAGGCAGGGCGAAGCCCAGTCCACCAGCGGCACAGAAGTAATa < 1:3787658‑M2/99‑1 (MQ=255) tactgcgctgcagcccacaacgcactgatgctgtagttcgccgaaccgtcGCCAATGACGGCGATGACTTGTCGTTCGGGTTCTGCGAGTTGCACCCCAATTGCTGCAGGCAGGGCGAAGCCCAGTCCACCAGCGGCACAGAAGTAATAGc < 1:4543036‑M2/101‑1 (MQ=255) gcgctgcagtccacaacgcactgatgctgtagttcgccgaaccgtcGCCAATGACGGCGATGACTTGTCGTTCGGGTTCTGCGAGTTGCACCCCAATTGCTGCAGGCAGGGCGAAGCCCAGTCCACCAGCGGCACAGAAGTAATAGCTAcc < 1:3528698‑M2/105‑1 (MQ=255) gctgcagtccacaacgcactgatgctgtagttcgccgaaccgtcGCCAATGACGGCGATGACTTGTCGTTCGGGTTCTGCGAGTTGCACCCCAATTGCTGCAGGCAGGGCGAAGCCCAGTCCACCAGCGGCACAGAAGTa > 1:3372495‑M2/45‑140 (MQ=255) tgcagtccacaacgcactgatgctgtagttcgccgaaccgtcGCCAATGACGGCGATGACTTGTCGTTCGGGTTCTGCGAGTTGCACCCCAATTGCTGCAGGCAGGGCGAAGCCCAGTCCACCAGCGGCACAGAAGTAATAGCTACCAggg < 1:3253576‑M2/109‑1 (MQ=255) tgcagtccacaacgcactgatgctgtagttcgccgaaccgtcGCCAATGACGGCGATGACTTGTCGTTCGGGTTCTGCGAGTTGCACCCCAATTGCTGCAGGCAGGGCGAAGCCCAGTCCACCAGCGGCACAGAAGTAATAGCTACCAggg > 2:195184‑M2/43‑151 (MQ=255) gtccacaacgcactgatgctgtagttcgccgaaccgtcGCCAATGACGGCGATGACTTGTCGTTCGGGTTCTGCGAGTTGCACCCCAATTGCTGCAGGCAGGGCGAAGCCCAGTCCACCAGCGGCACAGAAGTAATAGCTACCAGGGTTgc > 2:3649126‑M2/39‑151 (MQ=255) cacaacgcactgatgctgtagttcgccgaaccgtcGCCAATGACGGCGATGACTTGTCGTTCGGGTTCTGCGAGTTGCACCCCAATTGCTGCAGGCAGGGCGAAGCCCAGTCCACCAGCGGCACAGAAGTAATAGCTACCAGGGTTGCGCa > 2:3298059‑M2/36‑151 (MQ=255) cacaacgcactgatgctgtagttcgccgaaccgtcGCCAATGACGGCGATGACTTGTCGTTCGGGTTCTGCGAGTTGCACCCCAATTGCTGCAGGCAGGGCGAAGCCCAGTCCACCAGCGGCACAGAAGTAATAGCTACCAGGGTTGCGCa > 2:2986390‑M2/36‑151 (MQ=255) caacgcactgatgctgtagttcgccgaaccgtcGCCAATGACGGCGATGACTTGTCGTTCGGGTTCTGCGAGTTGCACCCCAATTGCTGCAGGCAGGGCGAAGCCCAGTCCACCAGCGGCACAGAAGTAATAGCTACCAGGGTTGCGCATg < 1:5413664‑M2/118‑1 (MQ=255) aacgcactgatgctgtagttcgccgaaccgtcGCCAATGACGGCGATGACTTGTCGTTCGGGTTCTGCGAGTTGCACCCCAATTGCTGCAGGCAGGGCGAAGCCCAGTCCACCAGCGGCACAGAAGTAATAGCTACCAGGGTTGCGCATGt > 1:930050‑M2/33‑151 (MQ=255) acgcactgatgctgtagttcgccgaaccgtcGCCAATGACGGCGATGACTTGTCGTTCGGGTTCTGCGAGTTGCACCCCAATTGCTGCAGGCAGGGCGAAGCCCAGTCCACCAGCGGCACAGAAGTAATAGCTACCAGGGTTGCGCATGtt < 1:404494‑M2/120‑1 (MQ=255) acgcactgatgctgtagttcgccgaaccgtcGCCAATGACGGCGATGACTTGTCGTTCGGGTTCTGCGAGTTGCACCCCAATTGCTGCAGGCAGGGCGAAGCCCAGTCCACCAGCGGCACAGAAGTAATAGCTACCAGGGTTGCGCATGtt > 2:5020188‑M2/32‑151 (MQ=255) acgcactgaggctgtagttcgccgaaccgtcGCCAATGACGGCGATGACTTGTCGTTCGGGTTCTGCGAGTTGCACCCCAATTGCTGCAGGCAGGGCGAAGCCCAGTCCACCAGCGGCACAGAAGTAATAGCTACCAGGGTTGCGCATGtt < 1:4355295‑M2/120‑1 (MQ=255) gcactgatgctgtagttcgccgaaccgtcGCCAATGACGGCGATGACTTGTCGTTCGGGTTCTGCGAGTTGCACCCCAATTGCTGCAGGCAGGGCGAAGCCCAGTCCACCAGCGGCACAGAAGTAATAGCTACCAGGGTTGCGCATGTTCa < 1:5121375‑M2/122‑1 (MQ=255) gatgctgtagttcgccgaaccgtcGCCAATGACGGCGATGACTTGTCGTTCGGGTTCTGCGAGTTGCACCCCAATTGCTGCAGGCAGGGCGAAGCCCAGTCCACCAGCGGCACAGAAGTAATAGCTACCAGGGTTGCGCATGTTCAGgcgc > 1:5764324‑M2/25‑151 (MQ=255) atgctgtagttcgccgaaccgtcGCCAATGACGGCGATGACTTGTCGTTCGGGTTCTGCGAGTTGCACCCCAATTGCTGCAGGCAGGGCGAAGCCCAGTCCACCAGCGGCACAGAAGTAATAGCTACCAGGGTTGCGCATGTTCAGGCGCt < 1:439548‑M2/128‑1 (MQ=255) tgctgtagttcgccgaaccgtcGCCAATGACGGCGATGACTTGTCGTTCGGGTTCTGCGAGTTGCACCCCAATTGCTGCAGGCAGGGCGAAGCCCAGTCCACCAGCGGCACAGAAGTAATAGCTACCAGGGTTGCGCATGTTCAGGCGCTg < 2:5619175‑M2/129‑1 (MQ=255) ctgtagttcgccgaaccgtcGCCAATGACGGCGATGACTTGTCGTTCGGGTTCTGCGAGTTGCACCCCAATTGCTGCAGGCAGGGCGAAGCCCAGTCCACCAGCGGCACAGAAGTAATAGCTACCAGGGTTGCGCATGTTCAGGCGCTGcc > 1:445838‑M2/21‑151 (MQ=255) ttcgccgaaccgtcGCCAATGACGGCGATGACTTGTCGTTCGGGTTCTGCGAGTTGCACCCCAATTGCTGCAGGCAGGGCGAAGCCCAGTCCACCAGCGGCACAGAAGTAATAGCTACCAGGGTTGCGCATGTTCAGGCGCTGCCACAttt > 2:102490‑M2/15‑151 (MQ=255) gccgaaccgtcGCCAATGACGGCGATGACTTGTCGTTCGGGTTCTGCGAGTTGCACCCCAATTGCTGCAGGCAGGGCGAAGCCCAGTCCACCAGCGGCACAGAAGTAATAGCTACCAGGGTTGCGCATGTTCAGGCGCTGCCACATTTggg < 1:3215742‑M2/140‑1 (MQ=255) gccgaaccgtcGCCAATGACGGCGATGACTTGTCGTTCGGGTTCTGCGAGTTGCACCCCAATTGCTGCAGGCAGGGCGAAGCCCAGTCCACCAGCGGCACAGAAGTAATAGCTACCAGGGTTGCGCATGTTCAGGCGCTGCCACATTTggg < 1:2746187‑M2/140‑1 (MQ=255) ccgaaccgtcGCCAATGACGGCGATGACTTGTCGTTCGGGTTCTGCGAGTTGCACCCCAATTGCTGCAGGCAGGGCGAAGCCCAGTCCACCAGCGGCACAGAAGTAATAGCTACCAGGGTTGCGCATGTTCAGGCGCTGCCACATTTGGGc < 1:5468342‑M2/141‑1 (MQ=255) cgaaccgtcGCCAATGACGGCGATGACTTGTCGTTCGGGTTCTGCGAGTTGCACCCCAATTGCTGCAGGCAGGGCGAAGCCCAGTCCACCAGCGGCACAGAAGTAATAGCTACCAGGGTTGCGCATGTTCAGGCGCTGCCACATTTGGGCg > 1:5715819‑M2/10‑151 (MQ=255) gaaccgtcGCCAATGACGGCGATGACTTGTCGTTCGGGTTCTGCGAGTTGCACCCCAATTGCTGCAGGCAGGGCGAAGCCCAGTCCACCAGCGGCACAGAAGTAATAGCTACCAGGGTTGCGCATGTTCAGGCGCTGCCACATTTGGGCgg > 2:423783‑M2/9‑151 (MQ=255) gaaccgtcGCCAATGACGGCGATGACTTGTCGTTCGGGTTCTGCGAGTTGCACCCCAATTGCTGCAGGCAGGGCGAAGCCCAGTCCACCAGCGGCACAGAAGTAATAGCTACCAGGGTTGCGCATGTTCAGGCGCTGCCACATTTGGGCgg > 2:3497349‑M2/9‑151 (MQ=255) tcGCCAATGACGGCGATGACTTGTCGTTCGGGTTCTGCGAGTTGCACCCCAATTGCTGCAGGCAGGGCGAAGCCCAGTCCACCAGCGGCACAGAAGTAATAGCTACCAGGGTTGCGCATGTTCAGGCGCTGCCACATTTGGGCGGTCGTTg < 1:6015842‑M2/149‑1 (MQ=255) tcGCCAATGACGGCGATGACTTGTCGTTCGGGTTCTGCGAGTTGCACCCCAATTGCTGCAGGCAGGGCGAAGCCCAGTCCACCAGCGGCACAGAAGTAATAGCTACCAGGGTTGCGCATGTTCAGGCGCTGCCACATTTGGGCGGTCGTTg < 1:5599633‑M2/149‑1 (MQ=255) cGCCAATGAGGGCGATGGCTTGTCGTACGGCTTCTGCGAGTTGCACCCCAATTGCTGAAGGCAGGGCGAAGCGAAGTCCACCAGCGGCACAGAAGTAATAGCTACCAGGGTTGCGAATGTTCCGGCGCTGCCACATTTGGGCGGTCGTTGa < 2:3533249‑M2/150‑1 (MQ=255) cGCCAATGACGGCGATGACTTGTCGTTCGGGTTCTGCGAGTTGCACCCCAATTGCTGCAGGCAGGGCGAAGCCCAGTCCACCAGCGGCACAGAAGTAATAGCTACCAGGGTTGCGCATGTTCAGGCGCTGCCACATTTGGGCGGTCGTTGa < 2:3830335‑M2/150‑1 (MQ=255) | GCGTGGCTGCCTGCCAGAAAAGTGTCCGGATGACCGTGGAGTCGGTGTCCGGATGCTCGTGGAATGAGTGTCCGGATCAGCGTGGAATCACTGTCCGGATGCGCGTGGAATGGGTGTCCGAGTCAGCGTGGAATCCGCAAACCGTCGCCAATGACGGCGATGACTTGTCGTTCGGGTTCTGCGAGTTGCACCCCAATTGCTGCAGGCAGGGCGAAGCCCAGTCCACCAGCGGCACAGAAGTAATAGCTACCAGGGTTGCGCATGTTCAGGCGCTGCCACATTTGGGCGGTCGTTGAA > CP009974/2758809‑2759105 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |