BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	CP009974	2,756,352	Δ2,603 bp		[RPPX_12250]–RPPX_12260	[RPPX_12250], RPPX_12255, RPPX_12260

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	CP009974	2756352–2758948	2758954	7–2603	330 [0]	[0] 328	[RPPX_12250]–RPPX_12260	[RPPX_12250],RPPX_12255,RPPX_12260

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009974	= 2756351	0 (0.000)	309 (0.990)	189/286	0.1	100%	coding (13/318 nt)	RPPX_12250	hypothetical protein
*	?	CP009974	2758955 =	0 (0.000)	309 (0.990)	189/286	0.1	100%	intergenic (‑211/‑1459)	RPPX_12260/RPPX_12270	integrase/membrane protein

Only 100 of 330 total aligned reads displayed.

CATCCAGCCCGGGAACGTTTTCTGCTTCGAGAACGCCGGCAAACCATCGCAACGCACCGTATGTGCCATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCTGCGGATTCCACGCCATTCGGACACTCAGCCCACGCTGATCCGGACACCTGTTCCACGCTCATTCGGACAGGCAGTCGGAGCGCAGCGACGCAGGGGTGGCATTGTTAGTCCGGGTTGGCTGGCGTCGTCAATTTCTGCGTCCGTTTGC  >  CP009974/2756201‑2756500

cATCCAGCCCGGGAACGTTTTCTGCTTCGAGAACGCCGGCAAACCATCGCAACGCACCGTATGTGCCATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTC                                                                                                                                                       >  1:1265133‑M1/1‑151 (MQ=255)

cATCCAGCCCGGGAACGTTTTCTGCTTCGAGAACGCCGGCAAACCATCGCAACGCACCGTATGTGCCATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTC                                                                                                                                                       >  1:3611999‑M1/1‑151 (MQ=255)

     aGCCCGGGAACGTTTTCTGCTTCGAGAACGCCGGCAAACCATAGCAACGCACCGTATGTGCCATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaa                                                                                                                                                  <  1:4425713‑M1/151‑6 (MQ=255)

      gCCCGGGAACGTTTTCTGCTTCGAGAACGCCGGCAAACCATCGCAACGCACCGTATGTGCCATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaat                                                                                                                                                 >  1:1729977‑M1/1‑145 (MQ=255)

       cccGGGAACGTTTTCTGCTTCGAGAACGCCGGCAAACCATCGCAACGCACCGTATGTGCCATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatg                                                                                                                                                >  1:5013595‑M1/1‑144 (MQ=255)

       cccGGGAACGTTTTCTGCTTCGAGAACGCCGGCAAACCATCGCAACGCACCGTATGTGCCATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatg                                                                                                                                                >  1:5556242‑M1/1‑144 (MQ=255)

          gggAACGTTTTCTGCTTCGAGAACGCCGGCAAACCATCGCAACGCACCGTATGTGCCATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacg                                                                                                                                             <  1:2482401‑M1/151‑11 (MQ=255)

          gggAACGTTTTCTGCTTCGAGAACGCCGGCAAACCATCGCAACGCACCGTATGTGCCATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacg                                                                                                                                             >  1:6148222‑M1/1‑141 (MQ=255)

           ggAACGTTTTCGGCTTCGAGAACGCCGGCAAACCATCGCAACGCACCGTATGTGCCATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacgg                                                                                                                                            <  2:4162521‑M1/151‑12 (MQ=255)

            gAACGTTTTCTGCTTCGAGAACGCCGGCACACCATCGCAACGCACCGTATGTGCCATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggc                                                                                                                                           <  2:5818219‑M1/151‑13 (MQ=255)

            gAACGTTTTCTGCTTCGAGAACGCCGGCAAACCATCGCAACGCACCGTATGTGCCATTGTTCATGATCACGAAGATGGTGGGGATGGTGTACTGCGCTGCGCTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggc                                                                                                                                           >  2:6269179‑M1/1‑139 (MQ=255)

               cGTTTTCTGCTTCGAGAACGCCGGCAAACCATCGCAACGCACCGTATGTGCCATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgat                                                                                                                                        <  1:80983‑M1/151‑16 (MQ=255)

                 ttttCTGCTTCGAGAACGCCGGCAAACCATCGCAACGCACCGTATGTGCCATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatga                                                                                                                                      >  2:1597872‑M1/1‑134 (MQ=255)

                 ttttCTGCTTCGAGAACGCCGGCAAACCATCGCAACGCACCGTATGTGCCATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatga                                                                                                                                      <  2:2391888‑M1/151‑18 (MQ=255)

                 ttttCTGCTTCGAGAACGCCGGCAAACCATCGCAACGCACCGTATGTGCCATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatga                                                                                                                                      >  1:2994543‑M1/1‑134 (MQ=255)

                  tttCTGCTTCGAGAACGCCGGCAAACCATCGCAACGCACCGTATGTGCCATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgac                                                                                                                                     <  1:2400145‑M1/151‑19 (MQ=255)

                      tGCTTCGAGAACGCCGGCAAACCATCGCAACGCACCGTATGTGCCATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgt                                                                                                                                 <  2:1334079‑M1/151‑23 (MQ=255)

                            gagaACGCCGGCAAACCATCGCAACGCACCGTATGTGCCATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcg                                                                                                                           >  2:3587854‑M1/1‑123 (MQ=255)

                            gagaACGCCGGCAAACCATCGCAACGCACCGTATGTGCCATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcg                                                                                                                           >  2:5418233‑M1/1‑123 (MQ=255)

                            gagaACGCCGGCAAACCATCGCAACGCACCGTATGTGCCATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgactcgtcgttcg                                                                                                                           >  2:514563‑M1/1‑123 (MQ=255)

                              gaACGCCGGCAAACCATCGCAACGCACCGTATGTGCCATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcggg                                                                                                                         <  1:5224694‑M1/151‑31 (MQ=255)

                                     ggCAAACCATCGCAACGCACCGTATGTGCCATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcg                                                                                                                  >  1:5813740‑M1/1‑114 (MQ=255)

                                     ggCAAACCATCGCAACGCACCGTATGTGCCATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcg                                                                                                                  >  2:918378‑M1/1‑114 (MQ=255)

                                       cAAACCATCGCAACGCACCGTATGTGCCATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgag                                                                                                                <  2:2285157‑M1/151‑40 (MQ=255)

                                       cAAACCATCGCAACGCACCGTATGTGCCATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgag                                                                                                                <  1:457318‑M1/151‑40 (MQ=255)

                                        aaaCCATCGCAACGCACCGTATGTGCCATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagt                                                                                                               >  2:2921749‑M1/1‑111 (MQ=255)

                                          aCCATCGCAACGCACCGTATGTGCCATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttg                                                                                                             <  1:5392650‑M1/151‑43 (MQ=255)

                                            cATCGCACCGCACCGTATGTGCCATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGACGCTGTAGTTCGCCGAACCGTCgcccatgacggcgatgacttgccgttcgggttccgcgatttgca                                                                                                           >  2:3323323‑M1/1‑107 (MQ=255)

                                            cATCGCAACGCACCGTATGTGCCATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgca                                                                                                           >  2:521902‑M1/1‑107 (MQ=255)

                                            cATCGCAACGCACCGTATGTGCCATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgca                                                                                                           >  1:5908930‑M1/1‑107 (MQ=255)

                                            cATCGCAACGCACCGTATGTGCCATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcga                                                                                                                 >  1:1142789‑M1/1‑107 (MQ=255)

                                              gcgCAACGCACCGTATGTGCCATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcacc                                                                                                         <  1:5162553‑M1/150‑47 (MQ=255)

                                                 cAACGCACCGTATGTGCCATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcacccca                                                                                                      <  2:4991880‑M1/151‑50 (MQ=255)

                                                 cAACGCACCGTATGTGCCATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcacccca                                                                                                      >  2:1199859‑M1/1‑102 (MQ=255)

                                                   aCGCACCGTATGTGCCATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgccccccaat                                                                                                    >  2:5556690‑M1/1‑100 (MQ=255)

                                                    cGCACCGTATGTGCCATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaatt                                                                                                   <  2:309775‑M1/151‑53 (MQ=255)

                                                      cACCGTATGTGCCATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgc                                                                                                 >  1:3477060‑M1/1‑97 (MQ=255)

                                                       aCCGTATGTGCCATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgct                                                                                                >  1:3648638‑M1/1‑96 (MQ=255)

                                                              gtgCCATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggca                                                                                         >  1:6081060‑M1/1‑89 (MQ=255)

                                                                 ccATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcaggg                                                                                      <  2:2997960‑M1/151‑66 (MQ=255)

                                                                 ccATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcaggg                                                                                      >  2:1399662‑M1/1‑86 (MQ=255)

                                                                  cATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggc                                                                                     <  1:3213842‑M1/151‑67 (MQ=255)

                                                                  cATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggc                                                                                     <  1:3238377‑M1/151‑67 (MQ=255)

                                                                   aTTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcg                                                                                    <  1:4142147‑M1/151‑68 (MQ=255)

                                                                     tGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaa                                                                                  >  2:380987‑M1/1‑82 (MQ=255)

                                                                        tCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcc                                                                               >  2:3295841‑M1/1‑79 (MQ=255)

                                                                            gATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagt                                                                           <  1:5683375‑M1/151‑77 (MQ=255)

                                                                            gATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagt                                                                           >  1:5042552‑M1/1‑75 (MQ=255)

                                                                             aTCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgccaggtgcaccccaattgctgcaggcagggcgcagcccagtc                                                                          >  2:5897406‑M1/1‑74 (MQ=255)

                                                                              tCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtcc                                                                         >  1:3948504‑M1/1‑73 (MQ=255)

                                                                                 cGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccacc                                                                      <  2:1050147‑M1/151‑82 (MQ=255)

                                                                                 cGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccacc                                                                      <  1:1979520‑M1/151‑82 (MQ=255)

                                                                                  gAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccacca                                                                     >  2:3528698‑M1/1‑69 (MQ=255)

                                                                                  gAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccacca                                                                     >  1:4743066‑M1/1‑69 (MQ=255)

                                                                                    aGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagc                                                                   >  2:6526704‑M1/1‑67 (MQ=255)

                                                                                        ggtggGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagcggca                                                               <  2:4527175‑M1/151‑89 (MQ=255)

                                                                                         gtggGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagcggcac                                                              >  1:726717‑M1/1‑62 (MQ=255)

                                                                                          tggGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagcggcaca                                                             >  1:1581209‑M1/1‑61 (MQ=255)

                                                                                           ggggATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagcggcacag                                                            >  2:6340373‑M1/1‑60 (MQ=255)

                                                                                            gggATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGGCGAACCGTCgccaatgagggcgatgacttgtcgttcgggttctgcgagttgcactccaattgctgcatgcagggcggagccctgtccaccagcggcacaca                                                           >  1:6008100‑M1/1‑59 (MQ=255)

                                                                                            gggATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagcggcacaga                                                           <  1:3815688‑M1/151‑93 (MQ=255)

                                                                                            gggATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagcggcacaga                                                           >  1:3307765‑M1/1‑59 (MQ=255)

                                                                                                 gttgtACGGCGCTGCAGTCCACAACGAAGTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagcggcacagaagtaa                                                      <  2:855237‑M1/151‑98 (MQ=255)

                                                                                                  ttgtACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagcggcacagaagtaat                                                     <  2:682580‑M1/151‑99 (MQ=255)

                                                                                                   tgtACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagcggcacagaagtaata                                                    <  2:6108015‑M1/151‑100 (MQ=255)

                                                                                                       cTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagcggcacagaagtaatagcta                                                <  1:2156905‑M1/151‑104 (MQ=255)

                                                                                                        tGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagcggcacagaagtaatagctac                                               <  1:2580875‑M1/151‑105 (MQ=255)

                                                                                                          cgcTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagcggcacagaagtaatagctacca                                             >  1:6490303‑M1/1‑45 (MQ=255)

                                                                                                          cgcTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagcggcacagaagtaatagctacca                                             <  2:2135791‑M1/151‑107 (MQ=255)

                                                                                                           gcTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagcggcacagaagta                                                       <  2:3372495‑M1/140‑97 (MQ=255)

                                                                                                              gCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagcggcacagaagtaatagctaccagggt                                         >  1:18168‑M1/1‑41 (MQ=255)

                                                                                                              gCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagcggcacagaagtaatagctaccagggt                                         <  2:2619147‑M1/151‑111 (MQ=255)

                                                                                                                aGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagcggcacagaagtaatagctaccagggttg                                       >  2:5010488‑M1/1‑39 (MQ=255)

                                                                                                                aGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagcggcacagaagtaatagctaccagggttg                                       <  1:898832‑M1/151‑113 (MQ=255)

                                                                                                                 gTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagcggcacagaagtaatagctaccagggttgc                                      <  1:4251362‑M1/151‑114 (MQ=255)

                                                                                                                  tCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagcggcacagaagtaatagctaccagggttgcg                                     <  2:2439807‑M1/151‑115 (MQ=255)

                                                                                                                      caACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagcggcacagaagtaatagctaccagggttgcgcatg                                 <  1:3691503‑M1/151‑119 (MQ=255)

                                                                                                                       aaCGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagcggcacagaagtaatagctaccagggttgcgcatgt                                <  2:3670120‑M1/151‑120 (MQ=255)

                                                                                                                        aCGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagcggcacagaagtaatagctaccagggttgcgcatgtt                               <  1:404494‑M1/151‑121 (MQ=255)

                                                                                                                        aCGCACTGAGGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagcggcacagaagtaatagctaccagggttgcgcatgtt                               <  1:4355295‑M1/151‑121 (MQ=255)

                                                                                                                         cGCACTGATGCTGTAGTTCGCCGCACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagcggcacagaagtaatagctaccagggttgcgcatgttc                              <  1:5418233‑M1/151‑122 (MQ=255)

                                                                                                                         cGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagcggcacagaagtaatagctaccagggttgcgcatgttc                              <  1:4481068‑M1/151‑122 (MQ=255)

                                                                                                                          gCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagcggcacagaagtaatagctaccagggttgcgcatgttca                             <  2:1729977‑M1/151‑123 (MQ=255)

                                                                                                                           ggctgAGGCTGTTGTCCGCCGGACGGTCgccaatgacggcgatgactggtcgttcggggtctgcgagttgcgcgccatttgctgcaggcagggcgaagcccagtccaccagcggcacagaagtaatagctaccagggttgcgcatgttcag                            <  2:1891962‑M1/149‑124 (MQ=255)

                                                                                                                           cACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagcggcacagaagtaatagctaccagggttgcgcatgttcag                            >  1:98161‑M1/1‑28 (MQ=255)

                                                                                                                               gATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagcggcacagaagtaatagctaccagggttgcgcatgttcaggcgc                        >  2:305882‑M1/1‑24 (MQ=255)

                                                                                                                               gATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagcggcacagaagtaatagctaccagggttgcgcatgttcaggcgc                        <  1:5732874‑M1/151‑128 (MQ=255)

                                                                                                                                 tGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagcggcacagaagtaatagctaccagggttgcgcatgttcaggcgctg                      <  2:324300‑M1/151‑130 (MQ=255)

                                                                                                                                 tGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagcggcacagaagtaatagctaccagggttgcgcatgttcaggcgctg                      <  1:5264576‑M1/151‑130 (MQ=255)

                                                                                                                                 tGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagcggcacagaagtaatagctaccagggttgcgcatgttcaggcgctg                      <  2:5619175‑M1/151‑130 (MQ=255)

                                                                                                                                    tGTAGTTCGCCGAACCGTCtccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagcggcacagaagtaatagctaccagggttgcgcatgttcaggcgctgcca                   >  2:464752‑M1/1‑19 (MQ=255)

                                                                                                                                       aGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagcggcacagaagtaatagctaccagggttgcgcatgttcaggcgctgccacat                <  2:2713654‑M1/151‑136 (MQ=255)

                                                                                                                                           cGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagcggcacagaagtaatagctaccagggttgcgcatgttcaggcgctgccacatttgg            >  1:3366441‑M1/1‑12 (MQ=255)

                                                                                                                                            gCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagcggcacagaagtaatagctaccagggttgcgcatgttcaggcgctgccacatttggg           <  1:2746187‑M1/151‑141 (MQ=255)

                                                                                                                                             ccGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagcggcacagaagtaatagctaccagggttgcgcatgttcaggcgctgccacatttgggc          <  2:4380193‑M1/151‑142 (MQ=255)

                                                                                                                                              cGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagcggcacagaagtgatagctaccagggttgcgcatgttcaggcgctgccacatttgggcg         >  2:4046274‑M1/1‑9 (MQ=255)

                                                                                                                                               gAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagcggcacagaagtaatagctaccagggttgcgcatgttcaggcgctgccacatttgggcgg        >  2:4560652‑M1/1‑8 (MQ=255)

                                                                                                                                                    gTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagcggcacagacgtaatagctaccagggttgcgcatgttcaggcgctgccacatttgggcggtcgtt   >  1:3888475‑M1/1‑3 (MQ=255)

                                                                                                                                                    gTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagcggcacagaagtaatagctaccagggttgcgcatgttcaggcgctgccacattggggcggtcgtt   >  2:2009944‑M1/1‑3 (MQ=255)

                                                                                                                                                     tCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagcggcacagaagtaatagctaccagggttgcgcatgttcaggcgctgccacatttgggcggtcgttg  <  1:4852531‑M1/151‑150 (MQ=255)

CATCCAGCCCGGGAACGTTTTCTGCTTCGAGAACGCCGGCAAACCATCGCAACGCACCGTATGTGCCATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCTGCGGATTCCACGCCATTCGGACACTCAGCCCACGCTGATCCGGACACCTGTTCCACGCTCATTCGGACAGGCAGTCGGAGCGCAGCGACGCAGGGGTGGCATTGTTAGTCCGGGTTGGCTGGCGTCGTCAATTTCTGCGTCCGTTTGC  >  CP009974/2756201‑2756500

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`