New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? U00096 = 256097291 (0.400)5 (0.030) 5/252 25.7 5.6% intergenic (+74/‑396) yffL/yffM uncharacterized protein YffL/uncharacterized protein YffM
?U00096 2561043 = 89 (0.460)intergenic (+145/‑325) yffL/yffM uncharacterized protein YffL/uncharacterized protein YffM
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 109 total aligned reads displayed.

GGCTATATACCAGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGCCGTTAAGGTGGGTCAAAAGTTGCCGTTAAGGTGGGTCAAAAGTTGCCGAGTAAGAATTCTACTATTAAGAATTCTAGGCGACGGGAGTTTTTTAGCCTCCCGGTCGGTCATAGAGAGTC  >  U00096/2560824‑2561113
                                                                                                                                                    |                                                                                                                                             
ggCTATATACCAGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCg                                                                                                                                               <  1:1957486/149‑1 (MQ=255)
  cTATATACCAGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCg                                                                                                                                               <  1:1957488/147‑1 (MQ=255)
  cTATATACCAGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGtt                                                                                                                                             <  1:1957487/149‑1 (MQ=255)
   tatataCCAGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGt                                                                                                                                              >  1:1957628/1‑147 (MQ=255)
   tatataCCAGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTa                                                                                                                                            >  1:1957577/1‑149 (MQ=255)
   tatataCCAGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTa                                                                                                                                            >  1:1957579/1‑149 (MQ=255)
    atataCCAGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGtgtg                                                                                                                                           >  2:1957621/1‑146 (MQ=255)
     tataCCAGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTaat                                                                                                                                          >  2:1957592/1‑147 (MQ=255)
     tataCCAGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAgt                                                                                                                                          <  1:1957490/149‑1 (MQ=255)
      ataCCAGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAgtg                                                                                                                                         <  1:1957491/149‑1 (MQ=255)
        aCCAGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAgtggt                                                                                                                                       <  2:1957493/149‑1 (MQ=255)
        aCCAGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAgtggt                                                                                                                                       <  2:1957492/149‑1 (MQ=255)
         ccAGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAgtggtg                                                                                                                                      <  2:1957494/149‑1 (MQ=255)
         ccAGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAgtggtg                                                                                                                                      <  2:1957495/149‑1 (MQ=255)
           aGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTggg                                                                                                                                    >  2:1957583/1‑149 (MQ=255)
            ggATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCg                                                                                                                                               >  1:1957525/1‑137 (MQ=255)
             gATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGt                                                                                                                                              >  1:1957543/1‑137 (MQ=255)
                 ggCAGAAAGTGAGTGCAAAGAATACCAGTTATTATTCAAGACGTACAACATGAAATAACGTAATCAGGCGGTCAATGTTCACGCCTTTTCTTTGCCTTAATTCCATGAATTCAGTTTGGTCAAAAGTTTCCGTTAATGTTGGTTAaaaa                                                                                                                              >  2:1957636/1‑149 (MQ=255)
                 ggCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCaaaa                                                                                                                              <  1:1957496/149‑1 (MQ=255)
                  gCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTATTGGTGGGTCaaa                                                                                                                               >  1:1957560/1‑147 (MQ=255)
                  gCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCaaaa                                                                                                                              <  1:1957497/148‑1 (MQ=255)
                  gCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAg                                                                                                                             >  2:1957503/1‑149 (MQ=255)
                      aaaGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGc                                                                                                                         <  1:1957498/149‑1 (MQ=255)
                      aaaGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGc                                                                                                                         <  1:1957499/149‑1 (MQ=255)
                      aaaGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTAAAAATTTGc                                                                                                                         >  2:1957605/1‑149 (MQ=255)
                       aaGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCg                                                                                                                                               >  1:1957572/1‑126 (MQ=255)
                        aGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAATTTGcct                                                                                                                       >  2:1957595/1‑148 (MQ=255)
                          ggAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGCCGtt                                                                                                                     <  2:1957500/149‑1 (MQ=255)
                           gAGTGCAACGAATACCAGTTATTATTCAAGCCGCACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGGCAAAAGTTGCCGTTa                                                                                                                    <  2:1957501/149‑1 (MQ=255)
                            aGTGCAACGAATACCAGTTATTATTCAAGCCGTACAGCATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGCCGTTaa                                                                                                                   <  1:1957502/149‑1 (MQ=255)
                              tGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATACCGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGCCGTTAAgg                                                                                                                 <  1:1957503/149‑1 (MQ=255)
                              tGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAAAGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGTGTCAAAAGTTGCCGTTAAgg                                                                                                                 <  2:1957504/149‑1 (MQ=255)
                               gCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGCCGTTAAgg                                                                                                                 >  1:1957613/1‑148 (MQ=255)
                               gCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGCCGTTAAGGt                                                                                                                <  2:1957505/149‑1 (MQ=255)
                               gCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGCCGTTAAGGt                                                                                                                >  1:1957507/1‑149 (MQ=255)
                                cAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGCCGTTAAGGTg                                                                                                               <  2:1957506/149‑1 (MQ=255)
                                cAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGCCGTTAAGGTg                                                                                                               <  2:1957507/149‑1 (MQ=255)
                                cAACGAATACCAGTTATTATTCAAGCCGTACAACAAGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAATTTGCCGTGAACGTg                                                                                                               >  1:1957553/1‑149 (MQ=255)
                                   cGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGCCGTTAAGGTGGGt                                                                                                            <  2:1957510/149‑1 (MQ=255)
                                    gAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCg                                                                                                                                               >  1:1957537/1‑113 (MQ=255)
                                     aaTACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAATGTTGACGTGAAGgtgtgtga                                                                                                          >  2:1957610/1‑147 (MQ=255)
                                     aaTACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAATGGTGGGTAAAAAGTTGCCGTGAAGGAGGGTCa                                                                                                          >  2:1957585/1‑149 (MQ=255)
                                       tACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCg                                                                                                                                               >  1:1957631/1‑110 (MQ=255)
                                        aCCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGCCGTTAAGGTGGGTCaaaa                                                                                                       <  2:1957512/149‑1 (MQ=255)
                                        aCCAGGTATTAATCCAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTCCCCGCCTTTTCATTCCCTTAAATCCATGAATTCAGGGGGGTCAAAAGTTGCCGTGAGTGGTGGGTCAAAAGTTGCCGTTAAGGTGGGTCaaaa                                                                                                       <  2:1957511/149‑1 (MQ=255)
                                             ttattaTTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTGAGGTGGGTCAAAAGTTGCCg                                                                                                                                               >  1:1957538/1‑104 (MQ=255)
                                             ttattaTTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGt                                                                                                                                              >  1:1957651/1‑105 (MQ=255)
                                             ttattaTTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGCCGTTAAGGTGGGTCAAAAGTTGc                                                                                                  <  1:1957514/149‑1 (MQ=255)
                                                ttattCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTACTGGTGGGTCAAAAGTTGCATTGAAGGAGGCTCAAAAGTTGGCGt                                                                                               >  2:1957611/1‑149 (MQ=255)
                                                ttattCAAGCCGGACAACATGAAATATAGGTATCAGTATTGCACTTTTCCAGCCTTTTCTTTGACTTTATTCCATGTATTCAGGTGGGTAAATAGTTGCCGTTATTGGTGGGTCAAAAGTTGCAGTTAAGGTGGGTCAAAAGTTGCCGt                                                                                               <  2:1957516/149‑1 (MQ=21)
                                                  attCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCg                                                                                                                                               >  1:1957566/1‑99 (MQ=255)
                                                   ttCTAGCCGTACATCATGAAATAACTGAATCAGTCGGGCATTGTTCCCGCCTTTTCTTTGCCTTAATTGCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGCCGTTAAGGTGGGTCAAAAGTTGCCGTTaa                                                                                            <  2:1957519/149‑1 (MQ=39)
                                                   ttCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGCCGTTAAGGTGGGTCAAAAGTTGCCGTTaa                                                                                            <  2:1957517/149‑1 (MQ=255)
                                                   ttCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGCCGTTAAGGTGGGTCAAAAGTTGCCGTTaa                                                                                            <  1:1957518/149‑1 (MQ=255)
                                                   ttCAAGCCGTACAACATGAAATAACGGAATCAGCCGTGCAATTTTCCCGCCTTTTCTTTGCCTTTATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGCCGTTAAGGTGGGTCAAAAGTTGCCGTTaa                                                                                            <  2:1957520/149‑1 (MQ=255)
                                                          cGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAATGATGGGTCAAATGTTGCCTTTAAGGAGTGTCAAATTTTGAAGTATAGGTgggg                                                                                     >  2:1957674/1‑148 (MQ=255)
                                                           gTACAACATGAAATAACGGAATCCGGCGCGCAGTTTTCCCGCCTTTTCTTTGCCATAATTCCATGAATTCAGGTGGGTCAACAGTTGCCGTTATTGGTGGGTCAAAAGTTGCCGTTAAGGTGGGTCAAAAGTTGCCGTTAAGGTGGGTc                                                                                    <  2:1957521/149‑1 (MQ=37)
                                                           gTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCg                                                                                                                                               >  1:1957554/1‑90 (MQ=255)
                                                              caacaTGAAATAACGGAATCAGGCTTGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGGTGCCGTTAGTGGTGGGTCAAAAGTTGCCGTTAAGGTGGGTCAAAAGTTGCCGTTAAGGTGGGTCaaa                                                                                 <  1:1957522/149‑1 (MQ=255)
                                                              caacaTGAAATAACCGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTTCCTTAATTCCATGAATTCATGTGGGTCAAAAGTTGCCGTTAGTGGGGGGTCAAAAGTTGCCGTTAAGGTGGGGCAAAAGTTGCCGTTAAGGTGGGTCaaa                                                                                 <  1:1957523/149‑1 (MQ=255)
                                                                acaTGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCg                                                                                                                                               >  1:1957565/1‑85 (MQ=255)
                                                                   tGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCg                                                                                                                                               >  1:1957607/1‑82 (MQ=255)
                                                                        tAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCg                                                                                                                                               >  1:1957619/1‑77 (MQ=255)
                                                                            ggAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCg                                                                                                                                               >  1:1957584/1‑73 (MQ=255)
                                                                                        gCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAATGTTGCCGTTTAGGAGGGTCAAAATTTGACGTTTAGGTGGCGGAAAAGTTGACGAGTAAGGATTATACTAtt                                                       >  2:1957582/1‑149 (MQ=37)
                                                                                          aaTGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCg                                                                                                                                               >  1:1957643/1‑59 (MQ=255)
                                                                                          aaTGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAgtgg                                                                                                                                        >  1:1957526/1‑66 (MQ=255)
                                                                                               tCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGCCGTTAAGGTGGGTCAAAAGTTGCCGTTAAGGTGGGTCAAAAGTTGCCGAGTAAGAATTCTACTATTAAGAAt                                                 >  1:1957678/1‑148 (MQ=255)
                                                                                                cccGCCTTTTCTTTGCCTTAATTCCATGAATTCTGGTGGGTCAAAAGTTGCCTTTAGTGGTGGGTCAATAGTTGCCTTTAAGGTGGGTCAAAAGTTGCCGTTAAGGTGGGTCAAAAGTTGCCGAGTAAGAATTCTACTATTAAGAATTc                                               <  2:1957528/149‑1 (MQ=255)
                                                                                                  cGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGCCGTTAAGGTGGGTGAAAAGTTGCCGTGAAGGTGGGTCAAAATTTGCCGAGAAAGAAGTCTACTATTAAGAATTCTa                                             >  2:1957670/1‑149 (MQ=38)
                                                                                                    ccTTTTCTTTTCCTTAATTACATGAATTCAGGTGGGTAAAAAGTTGCCGTTAGTGGTGGGTAAAAAGTTGCCGTTAAGGTGGGTCAAAAGTTGCCGTTAAGGTGGGTCAAAAGTTGCCGAGTAAGAATTCTACTATTAAGAATTCTAgg                                           <  2:1957531/149‑1 (MQ=255)
                                                                                                    ccTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGCCGTTAAGGAGGGTCAAAAGTTGAAGTTAAGGTGTGTCAAAATTAGCCTAGTAAGAATTCTACAATTAAGAATAATAgg                                           >  2:1957658/1‑149 (MQ=25)
                                                                                                     cTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGCCGTTAAGGAGGGACAAAAGTTGCCGTTAAGGTGGGGGAAAAGTTGACGAGAAAGAATTCTACAATTAAGAATAATAGGc                                          >  1:1957642/1‑149 (MQ=37)
                                                                                                      ttttCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGt                                                                                                                                              >  1:1957550/1‑48 (MQ=255)
                                                                                                         tCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCg                                                                                                                                               >  1:1957609/1‑44 (MQ=255)
                                                                                                         tCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGCCTTTAAGGAGGGTCAAATGTTGAAGTTAAGGTGGGGGAAAATTTGCCGAGTAAGAATTCTACAATTAAGAATTATAGgcggcg                                      >  2:1957591/1‑149 (MQ=37)
                                                                                                           tttGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCg                                                                                                                                               >  1:1957578/1‑42 (MQ=255)
                                                                                                           tttGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTg                                                                                                                          <  1:1957532/63‑1 (MQ=255)
                                                                                                            ttGCCTTAATTCCATGAATTCAGGTGGGTCAAATGTTGCCGTTAGTGGTGGGTCAAAAGTTGCCGTTAAGGTGGGTCAAATGTTGCCGTGAAGGGGGCGCAAAAGTAGCCGAGTAAGAATTCTACTATTAAGCATTCTAGCCGACggg                                    >  1:1957697/1‑148 (MQ=37)
                                                                                                            ttGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGATAGTGGTGGATCATAATTTGCCGTTAAGGAGGGTCAAAATTTGAAGATAACGTGGGTCAAAATTAGCGGAGAAAGGAGTAAAATATAATGAATTCTACGCGACCGGa                                   >  2:1957630/1‑149 (MQ=255)
                                                                                                             tGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAATTTGACGTTAAGGAGGGTCAAAATTTGAAGTAAAGGTGGCTCAAATTTTGACTAGAAAGAATTATAAAATTAAAAATAATAAGCCACggaat                                  >  2:1957647/1‑146 (MQ=16)
                                                                                                              gCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGt                                                                                                                                              >  1:1957676/1‑40 (MQ=255)
                                                                                                                cTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGc                                                                                                                         >  1:1957667/1‑59 (MQ=255)
                                                                                                                 ttAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGt                                                                                                                                              >  1:1957541/1‑37 (MQ=255)
                                                                                                                 ttAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGCCGTTAAGGTGGGTCAAAAGTTGGCGTTTAGGTGGGTCAAAATTTGACGAGTAAGAATTCTACAATTATGAATACTAGGCGACGGGAGtttt                              >  1:1957659/1‑149 (MQ=37)
                                                                                                                      tCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCaaa                                                                                                                               >  1:1957727/1‑47 (MQ=255)
                                                                                                                        cATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCaaa                                                                                                                               >  1:1957672/1‑45 (MQ=255)
                                                                                                                        cATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGCCGTTAAGGTGAGTCAAAAGTTGACGATAAGGTGGGTCAAAAGTTGCCTAGTAAGAATTCTACAATTAAGAATTCTAGGCGACGGGAGTTTTTTAGACt                       >  2:1957681/1‑149 (MQ=37)
                                                                                                                          tGAATTCAGGTGGGTCAAAAGTTGCCGTTAGtgttgg                                                                                                                                     >  1:3300000/1‑37 (MQ=255)
                                                                                                                           gcaTTCGGGGGGGAAAATAGGTGCCTTTTTTGGGGGGTAATAACCTGCCGTTACGGTGGGTCAAAAGTTGCCGTTAAGGTGGGTCAAAAGTTGCCGAGTAAGAATTCTACTATTAAGAATTCTAGGCGACGGGAGTTTTTTAGCCTccc                    <  2:1957553/147‑1 (MQ=25)
                                                                                                                           gAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGTTGGGTCAAAATTTGCCTTTAAGGAGGGTCAAAATTTGACGTAAAGGTGTCTCAAAATTTGACTAGTAAGAATTCTACAATTAAGAATTATAGGCGACGTGATTTTTATAGACtaac                    >  2:1957708/1‑146 (MQ=21)
                                                                                                                                  ggTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGTCGTTAAGGTTGGTCAAAAGTTGCCGTTAAGGTGGGTCAAAAGTTGCCGAGTAAGAATTCGACTATTAAGAATTCAAGGCGACGGGAGTTTTATAGCCTCCcggtcggt             >  1:1957752/1‑149 (MQ=38)
                                                                                                                                    tGGGTCAAAAGTTGCCGTTTGTGGTGGGTCAAAAGTTGCCGTTAAGGTGGGTCAAAAGTTGCCGTTAAGGGGGGGCAAAAGTTGCCGAGTAAGAATTCTACTATTAAGAATTCTAGGCGACGGGAGTTTTTTAGCCTCCCGGTCGGTCa           >  1:1957624/1‑149 (MQ=255)
                                                                                                                                       gTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGCCGTTAAGGTGGGTCAAAAGTTGCCGTTAAGGTGGGTCAAAAGTTGCAGAGTAAGAATTCTACTATTAAGAATTCTAGGCGACGGGAGTTTTTTAGCCTCCCGGTCGGTCATag        >  1:1957663/1‑149 (MQ=255)
                                                                                                                                         cAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGCCGTTAAGGTGGGTCGAAAGTTGCAGTTAAGGTGGGTCAAAAGTTGAAGAGAAAGAATTCTACTATTAAGAATTCTAGGCGACGGTAGTTTTTTATCCTCACGCTCGCTCAt          >  2:1957654/1‑145 (MQ=37)
                                                                                                                                         cAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGCCGTTAAGGCGGGGCAAATGTTGCAGTTAAGGTGGCTCAAAAGTTGACGCGAAAGACTTATAAAATTAAGAATACTACGCGCCGGGAGATTTTTAGACTCACGGACCCTCATagag      >  2:1957699/1‑149 (MQ=19)
                                                                                                                                          taaaGTTTGCTTTAGGGGTGGGTAAAAAGTTGCCTTTTAGGTGGGTCAAAAGTTGCCGTTAAGGTGGGTCAAAAGTTGCCGAGTAAGAATTCTACTATTAAGAATTCTAGGCGACGGGAGTTTTTTAGCCTCCCGGTCGGTCATagaga     <  2:1957540/148‑1 (MQ=37)
                                                                                                                                             aGTTGCCGTTAGTGGTGGGTCAAAAGTTGCCGTTAAGGTGGGTCAAAAGTTGCCGTTAAGGTGGGTCAAAAGTTGCCGAGTAAGAATTCTACTATTAAGAATTCTAGGCGACGGGAGTTTTTTAGCCTCGCGGTCGGTCATAGAGAGTc  >  2:1957706/1‑149 (MQ=255)
                                                                                                                                             aGTTGCCGTTAGTGGTGGGTCAAAAGTTGCCGTTAAGGTGGGTCAAAAGTTGCCGTTAAGGTGGGTCAAAAGTTGCCGAGTAAGAATTCTACTATTAAGAATTCTAGGCGACGGGAGTTTTTTAGCCTCCCGGTCGGTCATAGAGAGt   >  1:1957694/1‑148 (MQ=255)
                                                                                                                                                    gTTAGTGGTGGGTCAAAAGTTGCCGTTAAGGTGGGTCAAAAGTTGCCGTTAAGGTGGGTCAAAAGTTGCCGAGTAAGAATTCTACTATTAAGAATTCTAGGCGACGGGAGTTTTTTAGCCTCCCGGTCGGTCATagagag    >  1:1957686/1‑140 (MQ=255)
                                                                                                                                                    |                                                                                                                                             
GGCTATATACCAGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGCCGTTAAGGTGGGTCAAAAGTTGCCGTTAAGGTGGGTCAAAAGTTGCCGAGTAAGAATTCTACTATTAAGAATTCTAGGCGACGGGAGTTTTTTAGCCTCCCGGTCGGTCATAGAGAGTC  >  U00096/2560824‑2561113

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.