Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
JC JC	U00096	2,143,211	IS5 (–) +4 bp	intergenic (‑263/‑52)	udk ← / → dgcE	uridine/cytidine kinase/putative diguanylate cyclase DgcE

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	U00096	1427599 =	NA (NA)	63 (0.660)	54/288	1.3	100%	noncoding (1196/1196 nt)	IS5	repeat region
	?	U00096	= 2143214	0 (0.000)					intergenic (‑266/‑52)	udk/dgcE	uridine/cytidine kinase/putative diguanylate cyclase DgcE
*	?	U00096	= 1428794	NA (NA)	84 (0.870)	71/290	0.5	100%	noncoding (1/1196 nt)	IS5	repeat region
	?	U00096	2143211 =	0 (0.000)					intergenic (‑263/‑55)	udk/dgcE	uridine/cytidine kinase/putative diguanylate cyclase DgcE

ACCGGAAATAACGCCAGAAATGGTGGAAAAAATAGCCTAAATAGGCTGATTCGATGTGTTTGCGGGAAAAAAATCGGCCCAGATCCGCGAAATTTTAATCAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCct‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  U00096/1427743‑1427599 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGGATAATTTGCGCAACTGCGTTTAACATTTTTTACCTTACATAAAACTGATCAACGTAATTTGCCCCCGGGAATTCTTTGTCAACAATTAACTC  <  U00096/2143214‑2143065                                                                                                                                                                                                                                                                                                         ACCGGAAATAACGCCAGAAATGGTGGAAAAAATAGCCTAAATAGGCTGATTCGATGTGTTTGCGGGAAAAAAATCGGCCCAGATCCGCGAAATTTTAATCAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTA                                                                                                                                                     >  1:456545/1‑148     GAAATAACGCCAGAAATGGTGGAAAAAATAGCCTAAATAGGCTGATTCGATGTGTTTGCGGGAAAAAAATCGGCCCAGATCCGCGAAATTTTAATCAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACA                                                                                                                                                <  2:456611/149‑1        ATAACGCCAGAAATGGTGGAAAAAATAGCCTAAATAGGCTGATTCGATGTGTTTGCGGGAAAAAAATCGGCCCAGATCCGCGAAATTTTAATCAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAA                                                                                                                                             >  1:691239/1‑149           ACGCCAGAAATGGTGGAAAAAATAGCCTAAATAGGCTGATTCGATGTGTTTGCGGGAAAAAAATCGGCCCAGATCCGCGAAATTTTAATCAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTT                                                                                                                                          >  2:691271/1‑149             GCCAGAAATGGTGGAAAAAATAGCCTAAATAGGCTGATTCGATGTGTTTGCGGGAAAAAAATCGGCCCAGATCCGCGAAATTTTAATCAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTT                                                                                                                                        <  1:456600/149‑1             GCCAGAAATGGTGGAAAAAATAGCCTAAATAGGCTGATACGATGTGTTTGCGGGAAAAAAATCGGCCCAGATCCGCGAAATTTTAATCAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTT                                                                                                                                        >  2:691290/1‑149               CAGAAATGGTGGAAAAAATAGCCTAAATAGGCTGATTCGATGTGTTTGCGGGAAAAAAATCGGCCCAGATCCGCGAAATTTTAATCAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTAC                                                                                                                                      <  2:456562/149‑1               CAGAAATGGTGGAAAAAATAGCCTAAATAGGCTGATTCGATGTGTTTGCGGGAAAAAAATCGGCCCAGATCCGCGAAATTTTAATCAGCGAGTCAACTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTAC                                                                                                                                      <  2:456560/149‑1                  AAATGGTGGAAAAAATAGCCTAAATAGGCTGATTCGATGTGTTTGCGGGAAAAAAATCGGCCCAGATCCGCGAAATTTTAATCAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATT                                                                                                                                   <  1:456598/149‑1                  AAATGGTGGAAAAAATAGCCTAAATAGGCTGATTCGATGTGTTTGCGGGAAAAAAATCGGCCCAGATCCGCGAAATTTTAATCAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATT                                                                                                                                   <  2:456606/149‑1                     TGGTGGAAAAAATAGCCTAAATAGGCTGATTCGATGTGTTTGCGGGAAAAAAATCGGCCCAGATCCGCGAAATTTTAATCAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTA                                                                                                                                <  1:456553/149‑1                         GGAAAAAATAGCCTAAATAGGCTGATTCGATGTGTTTGCGGGAAAAAAATCGGCCCAGATCCGCGAAATTTTAATCAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATG                                                                                                                            >  1:691289/1‑149                         GGAAAAAATAGCCTAAATAGGCTGATTCGATGTGTTTGCGGGAAAAAAATCGGCCCAGATCCGCGAAATTTTAATCAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCAACTTCCCTAGTACAAAAGTTTTACATTTTATATG                                                                                                                            >  1:691231/1‑149                          GAAAAAATAGCCTAAATAGGCTGATTCGATGTGTTTGCGGGAAAAAAATCGGCCCAGATCCGCGAAATTTTAATCAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGC                                                                                                                           <  1:456556/149‑1                               AATAGCCTAAATAGGCTGATTCGATGTGTTTGCGGGAAAAAAATCGGCCCAGATCCGCGAAATTTTAATCAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATT                                                                                                                      <  2:456565/149‑1                                    CCTAAATAGGCTGATTCGATGTGTTTGCGGGAAAAAAATCGGCCCAGATCCGCGAAATTTTAATCAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCA                                                                                                                 <  2:456599/149‑1                                      TAAATAGGCTGATTCGATGTGTTTGCGGGAAAAAAATCGGCCCAGATCCGCGAAATTTTAATCAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATA                                                                                                               <  1:456577/149‑1                                       AAATAGGCTGATTCGATGTGTTTGCGGGAAAAAAATCGGCCCAGATCCGCGAAATTTTAATCAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAA                                                                                                              >  2:691273/1‑149                                         ATAGGCTGATTCGATGTGTTTGCGGGAAAAAAATCGGCCCAGATCCGCGAAATTTTAATCAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAG                                                                                                            >  1:691272/1‑149                                           AGGCTGATTCGATGTGTTTGCGGGAAAAAAATCGGCCCAGATCCGCGAAATTTTAATCAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTG                                                                                                          >  2:691246/1‑149                                               TGATTCGATGTGTTTGCGGGAAAAAAATCGGCCCAGATCCGCGAAATTTTAATCAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGT                                                                                                      >  1:691243/1‑149                                               TGATTCGATGTGTTTGCGGGAAAAAAATCGGCCCAGATCCGCGAAATTTTAATCAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGT                                                                                                      <  1:456572/149‑1                                                GATTCGATGTGTTTGCGGGAAAAAAATCGGCCCAGATCCGCGAAATTTTAATCAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTA                                                                                                     <  2:456548/149‑1                                                 ATTCGATGTGTTTGCGGGAAAAAAATCGGCCCAGATCAGCGAAATTATAATCAGCGAGTCAGCTTGGGAAGAAATGACATGGTTATTCGCAAATTCCCTAGTACAAAAGTTTTACATTTTATACGAGAATTGCTCAGAAAGTGACGTAA                                                                                                    >  2:691251/1‑149                                                   TCGATGTGTTTGCGGGAAAAAAATCGGCCCAGATCCGCGAAATTTTAATCAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAG                                                                                                  >  1:691237/1‑149                                                     GATGTGTTTGCGGGAAAAAAATCGGCCCAGATCCGCGAAATTTTAATCAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGC                                                                                                >  1:691230/1‑149                                                     GATGTGTTTGCGGGAAAAAAATCGGCCCAGATCCGCGAAATTTTAATCAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGC                                                                                                <  2:456545/149‑1                                                       TGTGTTTGCGGGAAAAAAATCGGCCCAGATCCGCGAAATTTTAATCAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGG                                                                                              >  2:691210/1‑149                                                            TTGCGTGAAAAAAATCGGCCCAGATCCGCTAAATTTTAATCAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCAGCTTCCCTAGTACAAAAGTATTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGGATAAT                                                                                         <  1:456552/149‑1                                                            TTGCGGGAAAAAAATCGGCCCAGATCCGCGAAATTTTAATCAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGGATAAT                                                                                         <  2:456571/149‑1                                                                    AAAAAATCGGCCCAGATCCGCGAAATTTTAATCAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGGATAATTTGCGCAA                                                                                 <  1:456546/149‑1                                                                          TCGGCCCAGATCCGCGAAATTTTAATCAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGGATAATTTGCGCAACTGCGT                                                                           <  1:691296/149‑1                                                                          TCGGCCCAGATCCGCGAAATTTTAATCAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGGATAATTTGCGCAACTG                                                                              >  1:691201/1‑146                                                                               CCAGATCCGCGAAATTTTAATCAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGGATAATTTGCGCAACTGCGTTTAAC                                                                      >  1:691294/1‑149                                                                               CCAGATCCGCGAAATTTTAATCAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGGATAATTTGCGCAACTGCGTTTAAC                                                                      >  1:691295/1‑149                                                                                   ATCCGCGAAATTTTAATCAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGGATAATTTGCGCAACTGCGTTTAACATTT                                                                  >  1:691293/1‑149                                                                                   ATCCGCGAAATTTTAATCAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGGATAATTTGCGCAACTGCGTTTAACATTT                                                                  <  1:691292/149‑1                                                                                      CGCGAAATTTTAATCAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGGATAATTTGCGCAACTGCGTTTAACATTTTTT                                                               >  2:691291/1‑149                                                                                             TTTTAATCAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGGATAATTTGCGCAACTGCGTTTAACATTTTTTACCTT                                                          <  1:691290/147‑1                                                                                                 AATCAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGTATAATTTGCGCAACTGCGTTTAACATTTTTTACCTTACATAA                                                    <  2:691289/149‑1                                                                                                       CGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGGATAATTTGCGCAACTGCGTTTAACATTTTTTACCTTACATAAAACTGA                                              <  1:691288/149‑1                                                                                                        GAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTA                                                                                                                                       <  1:456567/59‑1                                                                                                          GTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGGATAATTTGCGCAACTGCGTTTAACATTTTTTACCTTACATAAAACTGATCA                                           >  2:691287/1‑149                                                                                                             AGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGGATAATTTGCGCAACTGCGTTTAACATTTTTTACCTTACATAAAACTGATCAACG                                        >  2:691285/1‑149                                                                                                              GCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGGATAATTTGCGCAACTGCGTTTAACATTTTTTACCTTACATAAAACCGATCAACGT                                       >  1:691284/1‑149                                                                                                                 TGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGGATAATTTGCGCAACTGCGTTTAACATTTTTTACCTTACATAAAACTGATCAACGTAAT                                    >  2:691283/1‑149                                                                                                                   GGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGGATAATTTGCGCAACTGCGTTTAACATTTTTTACCTTACATAAAACTGATCAACGTAATTT                                  >  1:691282/1‑149                                                                                                                   GGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGGATAATTTGCGCAACTGCGTTTAACATTTTTTACCTTACATAAAACTGATCAACGTAATTT                                  >  2:691281/1‑149                                                                                                                   GGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGGATAATTTGCGCAACTGCGTTTAACATTTTTTACCTTACATAAAACTGATCAACGTAATTT                                  <  2:691280/149‑1                                                                                                                      AGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGGATAATTTGCGCAACTGCGTTTAACATTTTTTACCTTACATAAAACTGATCAACG                                        >  1:691286/1‑140                                                                                                                        AAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGGATAATTTGCGCAACTGCGTTTAACATTTTTTACCTTACATAAAACTGATCAACGTAATTTGCCCC                             <  2:691279/149‑1                                                                                                                                   TTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGGATAATTTGCGCAACTGCGTTTAACATTTTTTACCTTACATAAAACTGATCAACGTAATTTGCCCCCGGGAATTCTT                  >  1:691278/1‑149                                                                                                                                     ATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAACGGCGGATAATTTGCGCAACTGCGTTTAACATTTTTTACCTTACATAAAACTGATCAACGTAATTTGCCCCCGGGAATTCTTTG                >  2:691277/1‑149                                                                                                                                      TTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGGATAATTTGCGCAACTGCGTTTAACATTTTTTACCTTACATAAAACTGATCAACGTAATTTGCCCCCGGGAATTCTTTGT               >  2:691276/1‑149                                                                                                                                        CGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGGATAATTTGCGCAACTGCGTTTAACATTTTTTACCTTACATAAAACTGATCAACGTAATTTGCCCCCGGGAATTCTTTGTCA             >  2:691275/1‑149                                                                                                                                         gccCCTTCCCTAGTACAAAAGTTTTACATTTTATATTCGAAGTGCTCATAAAGTGACGTAAAGGCGGATAATTTGCGCAACTGCGTTTAACATTTTTTACCTTACATAAAACTGATCAACGTAATTTGCCCCCGGGAATTCTTTGTCAA            >  2:691274/4‑149                                                                                                                                            CCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGGATAATTTGCGCAACTGCGTTTAACATTTTTTACCTTACATAAAACTGATCAACGTAATTTGCCCCCGGGAATTCTTTGTCAAC           <  1:691273/147‑1                                                                                                                                             CTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGGATAATTTGCGCAACTGCGTTTAACATTTTTTACCTTACATAAAACTGATCAACGTAATTTGCCCCCGGGAATTCTTTGTCAACAAT        <  2:691272/149‑1                                                                                                                                             CTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGGATAATTTGCGCAACTGCGTTTAACATTTTTTACCTTACATAAAACTGATCAACGTAATTTGCCCCCGGGAATTCTTTGTCAACAAT        <  1:691271/149‑1                                                                                                                                               TCCCTAGTACAAAAGTTTTACCTTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGGATAATTTGCGCAACTGCGTTTAACATTTTTTACCTTACATAAAACTGATCAACGTAATTTGCCCCCGGGAATTCTTTGTCAACAATTA      >  1:691270/1‑149                                                                                                                                               TCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGGATAATTTGCGCAACTGCGTTTAACATTTTTTACCTTACATAAAACTGATCAACGTAATTTGCCCCCGGGAATTCTTTGTCAACAATTA      >  1:691269/1‑149                                                                                                                                                CCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGGATAATTTGCGCAACTGCGTTTAACATTTTTTACCTTACATAAAACTGATCAACGTAATTTGCCCCCGGGAATTCTTTGTCAACAATTAA     <  1:691285/149‑1                                                                                                                                                 CCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGGATAATTTGCGCAACTGCGTTTAACATTTTTTACCTTACATAAAACTGATCAACGTAATTTGCCCCCGGGAATTCTTTGTCAACAATTAAC    >  2:691268/1‑149                                                                                                                                                   TAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGGATAATTTGCGCAACTGCGTTTAACATTTTTTACCTTACATAAAACTGATCAACGTAATTTGCCCCCGGGAATTCTTTGTCAACAATTAACTC  >  1:691266/1‑149                                                                                                                                                   TAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGGATAATTTGCGCAACTGCGTTTAACATTTTTTACCTTACATAAAACTGATCAACGTAATTTGCCCCCGGGAATTCTTTGTCAACAATTAACTC  >  2:691267/1‑149                                                                                                                                                                                                                                                                                                         ACCGGAAATAACGCCAGAAATGGTGGAAAAAATAGCCTAAATAGGCTGATTCGATGTGTTTGCGGGAAAAAAATCGGCCCAGATCCGCGAAATTTTAATCAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCct‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  U00096/1427743‑1427599 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGGATAATTTGCGCAACTGCGTTTAACATTTTTTACCTTACATAAAACTGATCAACGTAATTTGCCCCCGGGAATTCTTTGTCAACAATTAACTC  <  U00096/2143214‑2143065

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.