Predicted mutation
evidence seq id position mutation annotation gene description
JC JC U00096 2,143,211 IS5 (–) +4 bp intergenic (‑263/‑52) udk ← / → dgcE uridine/cytidine kinase/putative diguanylate cyclase DgcE

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? U00096 1427599 =NA (NA)63 (0.660) 54/288 1.3 100% noncoding (1196/1196 nt) IS5 repeat region
?U00096 = 2143214 0 (0.000)intergenic (‑266/‑52) udk/dgcE uridine/cytidine kinase/putative diguanylate cyclase DgcE
* ? U00096 = 1428794NA (NA)84 (0.870) 71/290 0.5 100% noncoding (1/1196 nt) IS5 repeat region
?U00096 2143211 = 0 (0.000)intergenic (‑263/‑55) udk/dgcE uridine/cytidine kinase/putative diguanylate cyclase DgcE

Only 100 of 146 total aligned reads displayed.

AGATTCCGTGCGTAACCGCTGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACTGACAACAAGGGAAGGTGCGAATAAGCAGGTCATTTCTTCCCAAGCTGACTCGCTGATTAAAATTTCGCGGATCTGGGCCGATTTTTTTCCCGCAAACACATCGAATCAGCCTATTTAGGCTATTTTTTCCACCATTTCTGGCGTTATTTCCGGTTTTT  >  U00096/1427451‑1427747
                                                                                                                                                    |                                                                                                                                                    
gttaattgttgacaaagaattcccgggggcaaattacgttgatcagttttatgtaaggtaaaaaatgttaaacgcagttgcgcaaattatccgcctttacgtcactttatgagcaattcgcatataaaatgtaaaacttttgtactagg                                                                                                                                                      >  2:691268‑M1/149‑149 (MQ=255)
 ttaattgttgacaaagaattcccgggggcaaattacgttgatcagttttatgtaaggtaaaaaatgttaaacgcagttgcgcaaattatccgcctttacgtcactttatgagcaattcgcatataaaatgtaaaacttttgtactaggg                                                                                                                                                     <  1:691285‑M1/2‑1 (MQ=255)
 gATTCCGTGCGTAACCGCTGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACTGACAACAAggg                                                                                                                                                     <  2:456492/149‑1 (MQ=255)
  taattgttgacaaagaattcccgggggcaaattacgttgatcagttttatgtaaggtaaaaaatgttaaacgcagttgcgcaaattatccgcctttacgtcactttatgagcaattcgcatataaaaggtaaaacttttgtactagGGa                                                                                                                                                    >  1:691270‑M1/147‑149 (MQ=255)
  aTTCCGTGCGTAACCGCTGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACTGACAACAAGGGa                                                                                                                                                    <  1:456493/149‑1 (MQ=255)
    attgttgacaaagaattcccgggggcaaattacgttgatcagttttatgtaaggtaaaaaatgttaaacgcagttgcgcaaattatccgcctttacgtcactttatgagcaattcgcatataaaatgtaaaacttttgtactagGGAAg                                                                                                                                                  <  2:691272‑M1/5‑1 (MQ=255)
    attgttgacaaagaattcccgggggcaaattacgttgatcagttttatgtaaggtaaaaaatgttaaacgcagttgcgcaaattatccgcctttacgtcactttatgagcaattcgcatataaaatgtaaaacttttgtactagGGAAg                                                                                                                                                  <  1:691271‑M1/5‑1 (MQ=255)
      cGTGCGTAACCGCTGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACTGACAACAAGGGAAGGt                                                                                                                                                <  1:456495/149‑1 (MQ=255)
      cGTGCGTAACCGCTGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACTGACAACAAGGGAAGGt                                                                                                                                                <  2:456494/149‑1 (MQ=255)
      cGTGCGTAACCGCTGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACTGACAACAAGGGAAGGt                                                                                                                                                <  1:456496/149‑1 (MQ=255)
       gTGCGTAACCGCTGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACTGACAACAAGGGAAGGTg                                                                                                                                               <  2:456497/149‑1 (MQ=255)
        tGCGTAACCGCTGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACTGACAACAAGGGAAGGTGc                                                                                                                                              >  2:456531/1‑149 (MQ=255)
         tgacaaagaattcccgggggcaaattacgttgatcagttttatgtaaggtaaaaaatgttaaacgcagttgcgcaaattatccgcctttacgtcactttatgagcaattcgcatataaaatgtaaaacttttgtactagGGAAGGTGCg                                                                                                                                             >  2:691275‑M1/140‑149 (MQ=255)
           gTAACCGCTGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACTGACAACAAGGGAAGGTGCGaa                                                                                                                                           <  2:456499/149‑1 (MQ=255)
           acaaagaattcccgggggcaaattacgttgatcagttttatgtaaggtaaaaaatgttaaacgcagttgcgcaaattatccgcctttacgtcactttatgagcaattcgcatataaaatgtaaaacttttgtactagGGAAGGTGCGaa                                                                                                                                           >  2:691276‑M1/138‑149 (MQ=255)
              aagaattcccgggggcaaattacgttgatcagttttatgtaaggtaaaaaatgttaaacgcagttgcgcaaattatccgcctttacgtcactttatgagcaattcgcatataaaatgtaaaacttttgtactagGGAAGGTGCGAATaa                                                                                                                                        >  1:691278‑M1/135‑149 (MQ=255)
                   tGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACTGACAACAAGGGAAGGTGCGAATAAGCAgg                                                                                                                                   <  1:456500/149‑1 (MQ=255)
                    ggTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACTGACAACAAGGGAAGGTGCGAATAAGCAgg                                                                                                                                   >  1:456541/1‑148 (MQ=255)
                      ttCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACTGACAACAAGGGAAGGTGCGAATAAGCa                                                                                                                                     <  1:456501/144‑1 (MQ=255)
                       tCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGTGATTATCTCCGCGTAACTGACAACAAGGGAAGGTGCGAATAAGCAGGTCAt                                                                                                                               <  2:456502/149‑1 (MQ=255)
                       tCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACTGACAACAAGGGAAGGTGCGAATAAGCAGGTCAt                                                                                                                               >  1:456537/1‑149 (MQ=255)
                       tCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACTGACAACAAGGGAAGGTGCGAATAAGCAGGTCAt                                                                                                                               <  2:456504/149‑1 (MQ=255)
                         ggggcaaattacgttgatcagttttatgtaaggtaaaaaatgttaaacgcagttgcgcaaattatccgcctttacgtcactttatgagcaattcgcatataaaatgtaaaacttttgtactagGGAAGGTGCGAATAAGCAGGTCAttt                                                                                                                             <  2:691279‑M1/26‑1 (MQ=255)
                            gTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACTGACAACAAGGGAAGGTGCGAATAAGCAGGTCAtt                                                                                                                              <  1:456506/145‑1 (MQ=255)
                              aaattacgttgatcagttttatgtaaggtaaaaaatgttaaacgcagttgcgcaaattatccgcctttacgtcactttatgagcaattcgcatataaaatgtaaaacttttgtactagGGAAGGTGCGAATAAGCAGGTCATTTCTTcc                                                                                                                        <  2:691280‑M1/31‑1 (MQ=255)
                              aaattacgttgatcagttttatgtaaggtaaaaaatgttaaacgcagttgcgcaaattatccgcctttacgtcactttatgagcaattcgcatataaaatgtaaaacttttgtactagGGAAGGTGCGAATAAGCAGGTCATTTCTTcc                                                                                                                        >  1:691282‑M1/119‑149 (MQ=255)
                               aTGGTGGGGCCGGCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTAGCTCCGCGTAACTGACAACAAGGGAAGGTGCGAATAAGCAGGTCATTTCTTccc                                                                                                                       <  1:456507/149‑1 (MQ=255)
                                tggtggGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACTGACAACAAGGGAAGGTGCGAATAAGCAGGTCATTTCTTCCCa                                                                                                                      >  2:456564/1‑149 (MQ=255)
                                attacgttgatcagttttatgtaaggtaaaaaatgttaaacgcagttgcgcaaattatccgcctttacgtcactttatgagcaattcgcatataaaatgtaaaacttttgtactagGGAAGGTGCGAATAAGCAGGTCATTTCTTCCCa                                                                                                                      >  2:691283‑M1/117‑149 (MQ=255)
                                 ggtggGGCCGGATGTGGGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACTGACAACAAGGGAAGGTGCGAATAAGCAGGTCATTTCTTCCCaa                                                                                                                     <  2:456508/149‑1 (MQ=255)
                                    cgttgatcagttttatgtaaggtaaaaaatgttaaacgcagttgcgcaaattatccgcctttacgtcactttatgagcaattcgcatataaaatgtaaaacttttgtactagGGAAGGTGCGAATAAGCAGGTCATttct                                                                                                                           >  1:691286‑M1/113‑140 (MQ=255)
                                    cgttgatcagttttatgtaaggtaaaaaatgttaaacgcagttgcgcaaattatccgcctttacgtcactttatgagcaattcgcatataaaatgtaaaacttttgtactagGGAAGGTGCGAATAAGCAGGTCATTTCTTCCCAAGCt                                                                                                                  >  2:691285‑M1/113‑149 (MQ=255)
                                       gCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACTGACAACAAGGGAAGGTGCGAATAAGCAGGTCATTTCTTccc                                                                                                                       <  1:456510/141‑1 (MQ=255)
                                          gTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACTGACAACAAGGGAAGGTGCGAATAAGCAGGTCATTTCTTCCCAAGCTGACTCg                                                                                                            >  1:456542/1‑149 (MQ=255)
                                            cTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACTGACAACAAGGGAAGGTGCGAATAAGCAGGTCATTTCTTCCCAAGCTGACTCGCt                                                                                                          >  2:456539/1‑149 (MQ=255)
                                              gtgCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCCCCGCGTAACTGACAACAAGGGAAGGTGCGAATAAGCAGGTCATTTCTTCCCAAGCTGACTCGCTGa                                                                                                        <  1:456512/149‑1 (MQ=255)
                                                ttatgtaaggtaaaaaatgttaaacgcagttgcgcaaattatacgcctttacgtcactttatgagcaattcgcatataaaatgtaaaacttttgtactagGGAAGGTGCGAATAAGCAGGTCATTTCTTCCCAAGCTGACTCGCTGAtt                                                                                                      <  2:691289‑M1/49‑1 (MQ=255)
                                                   cgTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACTGACAACAAGGGAAGGTGCGAATAAGCAGGTCATTTCTTCCCAAGCTGACTCGCTGATTaaa                                                                                                   <  2:456513/149‑1 (MQ=255)
                                                     tgaatgaaTGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACTGACAACAAGGGAAGGTGCGAATAAGCAGGTCATTTCTTCCCAAGCTGACTCGCTGATTAAAAt                                                                                                 <  2:1342856/149‑1 (MQ=255)
                                                      gaatgaatGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACTGACAACAAGGGAAGGTGCGAATAAGCAGGTCATTTCTTCCCAAGCTGACTCGCTGATTAAAAtt                                                                                                <  2:456514/149‑1 (MQ=255)
                                                      aaggtaaaaaatgttaaacgcagttgcgcaaattatccgcctttacgtcactttatgagcaattcgcatataaaatgtaaaacttttgtactagGGAAGGTGCGAATAAGCAGGTCATTTCTTCCCAAGCTGACTCGCTGATTaaaa                                                                                                  <  1:691290‑M1/53‑1 (MQ=255)
                                                          gaatgGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGAATATCTCCGCGTAACTGACAACAAGGGAAGGTGCGAATAAGCAGGTCATTTCTTCCCACGCTGACTCGCTGATTAAAAATTcgc                                                                                            >  1:456555/1‑149 (MQ=255)
                                                              ggTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACTGACAACAAGGGAAGGTGCGAATAAGCAGGTCATTTCTTCCCAAGCTGACTCGCTGATTAAAATTTCGCGGAt                                                                                        >  2:456538/1‑149 (MQ=255)
                                                              ggTTCAGCGCGGATGCGATGGCGGGTATGGCGTACAGCCGTGTGTCGACTTTCTCCGGGGATTCTCTCCGCGTAACTGACAACAAGGGAAGGTGCGAATAAGCAGGTCATTTCTTCCCAAGCTGACTCGCTGATTAAAATTTCGCGGAt                                                                                        <  2:456516/149‑1 (MQ=255)
                                                              aaatgttaaacgcagttgcgcaaattatccgcctttacgtcactttatgagcaattcgcatataaaatgtaaaacttttgtactagGGAAGGTGCGAATAAGCAGGTCATTTCTTCCCAAGCTGACTCGCTGATTAAAATTTCGCGGAt                                                                                        >  1:691293‑M1/87‑149 (MQ=255)
                                                                 tCAGCGCGTATGCGATGGCGGGTATGGCTTACCGCCGGGTGGCGACGTTCTCCGGGGATTATCTCCGCGGACCTGCCAACAAGGGAAGGTGCGAATAAGCAGGTCCTTTCTGCACAAGCGGACTCGCTGATTAAAATGTCGCGGAGCtt                                                                                     >  2:456624/1‑148 (MQ=255)
                                                                 tCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACTGACAACAAGGGAAGGTGCGAATAAGCAGGTCATTTCTTCCCAAGCTGACTCGCTGATTAAAATTTCGCGGATCTg                                                                                     >  1:456574/1‑149 (MQ=255)
                                                                  gttaaacgcagttgcgcaaattatccgcctttacgtcactttatgagcaattcgcatataaaatgtaaaacttttgtactagGGAAGGTGCGAATAAGCAGGTCATTTCTTCCCAAGCTGACTCGCTGATTAAAATTTCGCGGATCTgg                                                                                    >  1:691294‑M1/83‑149 (MQ=255)
                                                                    gcgcGTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACTGACAACAAGGGAAGGTGCGAATAAGCAGGTCATTTCTTCCCAAGCTGACTCGCTGATTAAAATTTAGCGGATCTGGGc                                                                                  >  1:456589/1‑149 (MQ=255)
                                                                       acgcagttgcgcaaattatccgcctttacgtcactttatgagcaattcgcatataaaatgtaaaacttttgtactagGGAAGGTGCGAATAAGCAGGTCATTTCTTCCCAAGCTGACTCGCTGATTAAAATTTCGCGGATCTGGGCCGa                                                                               <  1:691296‑M1/72‑1 (MQ=255)
                                                                         tATGCGATGGCGGGTATTGCTTAAAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCATAGTAACTGACAACAAGGGAAGGTGAGAATAAGAAGGTAATTTCTTACCAAGCTGACTCGCTGATTAAAATTTCTCGGATCTGGGCAGAtt                                                                             >  2:456586/1‑149 (MQ=255)
                                                                          aTGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACTGACAACAAGGGAAGGTGCGAATAAGCAGGTCATTTCTTCCCAAGCTGACTCGCTGATTAAAATTTCGCGGATCTGGGCCGAttt                                                                            >  2:456550/1‑149 (MQ=255)
                                                                          aTGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACTGACAACAAGGGAAGGTGCGAATAAGCAGGTCATTTCTTCCCAAGCTGACTCGCTGATTAAAATTTCGCGGATCTGGGCCGAttt                                                                            <  1:456518/149‑1 (MQ=255)
                                                                             ttgcgcaaattatccgcctttacgtcactttatgagcaattcgcatataaaatgtaaaacttttgtactagGGAAGGTGCGAATAAGCAGGTCATTTCTTCCCAAGCTGACTCGCTGATTAAAATTTCGCGGATCTGGGCCGAtttttt                                                                         <  1:456546‑M1/78‑1 (MQ=255)
                                                                                tGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTTTCTCCGCGTAACTGACAACAAGGGAAGGTGCGAATAAGCTGGTCATTTCTTCCCAAGCTGACTCGCTGATTAAAATTTCGCGGATCTGGGCCGATTTTTTTcc                                                                      <  2:456519/149‑1 (MQ=255)
                                                                                  gCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACTGACAACAAGGGAAGGTGCGAATAAGCAGGTCATTTCTTCCCAAGCTGACTCGCTGATTAAAATTTCGCGGATCTGGGCCGATTTTTTTCCCg                                                                    <  2:456521/149‑1 (MQ=255)
                                                                                     ggTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACTGACAACAAGGGAAGGTGCGAATAAGCAGGTCATTTCTTCCCAAGCTGACTCGCTGATTAAAATTTCGCGGATCTggg                                                                                   <  1:456522/131‑1 (MQ=255)
                                                                                     attatccgcctttacgtcactttatgagcaattcgcatataaaatgtaatacttttgtactagGGAAGCTGCGAATAAGCAGGTCATTTCTTCCCAAGCTGACTCGCTGATTAAAATTTAGCGGATCTGGGCCGATTTTTTTCACGCaa                                                                 <  1:456552‑M1/86‑1 (MQ=255)
                                                                                     attatccgcctttacgtcactttatgagcaattcgcatataaaatgtaaaacttttgtactagGGAAGGTGCGAATAAGCAGGTCATTTCTTCCCAAGCTGACTCGCTGATTAAAATTTCGCGGATCTGGGCCGATTTTTTTCCCGCaa                                                                 <  2:456571‑M1/86‑1 (MQ=255)
                                                                                       tATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACTGACAACAAGGGAAGGTGCGAATAAGCAGGTCATTTCTTCCCAAGCTGACTCGCTGATTAAAATTTCGCGGATCTGGGCCGATTTTTTCCCGCAAaca                                                              <  2:456523/149‑1 (MQ=255)
                                                                                       tATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACTGACAACAAGGGAAGGTGCGAATAAGCAGGGCATTTCTTCCCAAGCTGACTCGCTGATTAAAATTTCGCGGATCTGGGCCGATTTTTTTCCCGCAAac                                                               <  2:456524/149‑1 (MQ=255)
                                                                                           gCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACTGACAACAAGGGAAGGTGCGAATAAGCAGGTCATTTCTTCCCAAGCTGACTCGCTGATTAAAATTTCGCGGATCTGGGCCGATTTTTTTCCCGCAAACACAt                                                           <  1:456527/149‑1 (MQ=255)
                                                                                            gcctttacgtcactttatgagcaattcgcatataaaatgtaaaacttttgtactagGGAAGGTGCGAATAAGCAGGTCATTTCTTCCCAAGCTGACTCGCTGATTAAAATTTCGCGGATCTGGGCCGATTTTTTTCCCGCAAACACATc                                                          >  1:691230‑M1/57‑149 (MQ=255)
                                                                                            gcctttacgtcactttatgagcaattcgcatataaaatgtaaaacttttgtactagGGAAGGTGCGAATAAGCAGGTCATTTCTTCCCAAGCTGACTCGCTGATTAAAATTTCGCGGATCTGGGCCGATTTTTTTCCCGCAAACACATc                                                          <  2:456545‑M1/93‑1 (MQ=255)
                                                                                               aCAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACTGACAACAAGGGAAGGTGCGAATAAGCAGGTCATTTCTTCCCAAGCTGACTCGCTGATTAAAATTTCGCGGATCTGGGCCGATTTTTTTCCCGCAAACACATCGaa                                                       <  2:456528/149‑1 (MQ=255)
                                                                                                ttacgtcactttctgagcaattctcgtataaaatgtaaaacttttgtactagGGAATTTGCGAATAACCATGTCATTTCTTCCCAAGCTGACTCGCTGATTATAATTTCGCTGATCTGGGCCGATTTTTTTCCCGCAAACACATCGAAt                                                      >  2:691251‑M1/53‑149 (MQ=255)
                                                                                                  acgtcactttatgagcaattcgcatataaaatgtaaaacttttgtactagGGAAGGTGCGAATAAGCAGGTCATTTCTTCCCAAGCTGACTCGCTGATTAAAATTTCGCGGATCTGGGCCGATTTTTTTCCCGCAAACACATCGAATCa                                                    >  1:691243‑M1/51‑149 (MQ=255)
                                                                                                      tgtgtCGACTTTCTCCGGGGATTATCTCCGCGTAACTGACAACAAGGGAAGGTGCGAATAAGCAGGTCATTTCTTCCCAAGCTGACTCGCTGATTAAAATTTCGCGGATCTGGGCCGATTTTTTTCCCGCAAACACATCGAATCAGCCt                                                <  2:456529/149‑1 (MQ=255)
                                                                                                      cactttatgagcaattcgcatataaaatgtaaaacttttgtactagGGAAGGTGCGAATAAGCAGGTCATTTCTTCCCAAGCTGACTCGCTGATTAAAATTTCGCGGATCTGGGCCGATTTTTTTCCCGCAAACACATCGAATCAGCCt                                                >  2:691246‑M1/47‑149 (MQ=255)
                                                                                                        ctttatgagcaattcgcatataaaatgtaaaacttttgtactagGGAAGGTGCGAATAAGCAGGTCATTTCTTCCCAAGCTGACTCGCTGATTAAAATTTCGCGGATCTGGGCCGATTTTTTTCCCGCAAACACATCGAATCAGCCTAt                                              >  1:691272‑M1/45‑149 (MQ=255)
                                                                                                          ttatgagcaattcgcatataaaatgtaaaacttttgtactagGGAAGGTGCGAATAAGCAGGTCATTTCTTCCCAAGCTGACTCGCTGATTAAAATTTCGCGGATCTGGGCCGATTTTTTTCCCGCAAACACATCGAATCAGCCTAttt                                            >  2:691273‑M1/43‑149 (MQ=255)
                                                                                                          tCGACTTTCTCCGGGGATTATCTCCGCGTAACTGACAACAAGGGAAGGTGCGAATAAGCAGGTCATTTCTTCCCAAGCTGACTCGCTGATTAAAATTTCGCGGATCTGGGCCGATTTTTTTCCCGCAAACACATCGAATCAGCCTAttt                                            <  1:456531/149‑1 (MQ=255)
                                                                                                          tCGACTTTCTCCGGGGATTATCTCCGCGTAACTGACAACAAGGGAAGGTGCGAATAAGCAGGTCATTTCTTCCCAAGCTGACTCGCTGATTAAAATTTCGCGGATCTGGGCCGATTTTTTTCCCGCAAACACATCGAATCAGCCTAttt                                            <  2:456532/149‑1 (MQ=255)
                                                                                                            gACTTTCTCCGGGGATTATCTCCGCGTAACTGACAACAAGGGAAGGTGCGAATAAGCAGGTCATTTCTTCCCAAGCTGACTCGCTGATTAAAATTTCGCGGAt                                                                                        <  1:456533/103‑1 (MQ=255)
                                                                                                             tgagcaattcgcatataaaatgtaaaacttttgtactagGGAAGGTGCGAATAAGCAGGTCATTTCTTCCCAAGCTGACTCGCTGATTAAAATTTCGCGGATCTGGGCCGATTTTTTTCCCGCAAACACATCGAATCAGCCTATTTAgg                                         <  2:456599‑M1/110‑1 (MQ=255)
                                                                                                              cTTTCTCCGGGGATTATCTCCGCGTAACTGACAACAAGGGAAGGTGCGAATAAGCAGGTCATTTCTTCCCAAGCTGACTCGCTGATTAAAATTTCGCGGATCTGGGCCGATTTTTTTCCCGCAAACACATCGAATCAGCCTATTTAGGc                                        >  1:456561/1‑149 (MQ=255)
                                                                                                                ttCTCCGGGGATTATCTCCGCGTAACTGACAACAAGGGAAGGTGCGAATAAGCAGGTCATTTCTTCCCAAGCTGACTCGCTGATTAAAATTTCGCGGATCTGGGCCGATTTTTTTCCCGCAAACACATCGAATCAGCCTATTTAGGCTa                                      >  1:456573/1‑149 (MQ=255)
                                                                                                                  aattcgcatataaaatgtaaaacttttgtactagGGAAGGTGCGAATAAGCAGGTCATTTCTTCCCAAGCTGACTCGCTGATTAAAATTTCGCGGATCTGGGCCGATTTTTTTCCCGCAAACACATCGAATCAGCCTATTTAGGCTAtt                                    <  2:456565‑M1/115‑1 (MQ=255)
                                                                                                                    ccGGGGATTATCTCCGCGTAACTGACAACAAGGGAAGGTGCGAATAAGCAGGTCATTTCTTCCCAAGCTGACTCGCTGATTAAAATTTCGCGGATCTGGGCCGATTTTTTTCCCGCAAACACATCGAATCAGCCTATTTAGGCTAt                                     <  2:456535/146‑1 (MQ=255)
                                                                                                                      ggggATTATCTCCGCGTAACTGACAACAAGGGAAGGTGCGAATAAGCAGGTCATTTCTTCCCAAGCTGACTCGCTGATTAAAATTTCGCGGATCTGGGCCGATTTTTTTCCCGCAAACACATCGAATCAGCCTATTTAGGCTAtttttt                                <  2:456536/149‑1 (MQ=255)
                                                                                                                       gcatataaaatgtaaaacttttgtactagGGAAGGTGCGAATAAGCAGGTCATTTCTTCCCAAGCTGACTCGCTGATTAAAATTTCGCGGATCTGGGCCGATTTTTTTCCCGCAAACACATCGAATCAGCCTATTTAGGCTATTTTTTc                               <  1:456556‑M1/120‑1 (MQ=255)
                                                                                                                        catataaaatgtaaaacttttgtactagGGAAGTTGCGAATAAGCAGGTCATTTCTTCCCAAGCTGACTCGCTGATTAAAATTTCGCGGATCTGGGCCGATTTTTTTCCCGCAAACACATCGAATCAGCCTATTTAGGCTATTTTTTcc                              >  1:691231‑M1/29‑149 (MQ=255)
                                                                                                                        catataaaatgtaaaacttttgtactagGGAAGGTGCGAATAAGCAGGTCATTTCTTCCCAAGCTGACTCGCTGATTAAAATTTCGCGGATCTGGGCCGATTTTTTTCCCGCAAACACATCGAATCAGCCTATTTAGGCTATTTTTTcc                              >  1:691289‑M1/29‑149 (MQ=255)
                                                                                                                         gATTATCTCCGCGTAACTGACAACAAGGGAAGGTGCGAATAAGCAGGTCATTTCTTCCCAAGCTGACTCGCTGATTAAAATTTCGCGGATCTGGGCCGAttttt                                                                          >  1:456570/1‑104 (MQ=255)
                                                                                                                         gATTATCTCCGCGTAACTGACAACAAGGGAAGGTGCGAATAAGCAGGTCATTTCTTCCCAAGCTGACTCGCTGATTAAAATTTCGCGGATCTGGGCCGATTTTTTTCCCGCAAACACATCGAATCAGCCTATTTAGGCTATTTTTTcca                             >  2:456568/1‑149 (MQ=255)
                                                                                                                            taaaatgtaaaacttttgtactagGGAAGGTGCGAATAAGCAGGTCATTTCTTCCCAAGCTGACTCGCTGATTAAAATTTCGCGGATCTGGGCCGATTTTTTTCCCGCAAACACATCGAATCAGCCTATTTAGGCTATTTTTTccacca                          <  1:456553‑M1/125‑1 (MQ=255)
                                                                                                                            tATCTCCGCGTAACTGACAACAAGGGAAGGTGCGAATAAGCAGGTCATTTCTTCCCAAGCTGACTCGCTGATTAAAATTTCGCGGATCTGGGCCGATTTTTTTCCCGCAAACACATCGAATCAGCCTATTTAGGCTATTTTTTccacca                          <  1:456538/149‑1 (MQ=255)
                                                                                                                               aatgtaaaacttttgtactagGGAAGGTGCGAATAAGCAGGTCATTTCTTCCCAAGCTGACTCGCTGATTAAAATTTCGCGGATCTGGGCCGATTTTTTTCCCGCAAACACATCGAATCAGCCTATTTAGGCTATTTTTTCCACCAttt                       <  1:456598‑M1/128‑1 (MQ=255)
                                                                                                                                  gtaaaacttttgtactagGGAAGGTGCGAATAAGCAGGTCATTTCTTCCCAAGTTGACTCGCTGATTAAAATTTCGCGGATCTGGGCCGATTTTTTTCCCGCAAACACATCGAATCAGCCTATTTAGGCTATTTTTTCCACCATTTCTg                    <  2:456560‑M1/131‑1 (MQ=255)
                                                                                                                                  cgcgTAACTGACAACAAGGGAAGGTGCGAATAAGCAGGTCATTTCTTCCCAAGCTGACTCGCTGATTAAAATTTCGCGGATCTGGGCCGATTTTTTTCCCGCAAACACATCGAATCAGCCTATTTAGGCTATTTTTTCCACCATTTCTg                    <  2:456541/149‑1 (MQ=255)
                                                                                                                                   taaaacttttgtactagGGAAGGTGCGAATAAGCAGGTCATTTCTTCCCAAGCTGACTc                                                                                                             <  1:456567‑M1/42‑1 (MQ=255)
                                                                                                                                   gcgTAACTGACAACAAGGGAAGGTGCGAATAAGCAGGTCATTTCTTCCCAAGCTGACTCGCTGATTAAAATTTCGCGGATCTGGGCCGATTTTTTTCCCGCAAACACATCGAATCAGCCTATTTAGGCTATTTTTTCCACCATTTCTgg                   >  1:456588/1‑149 (MQ=255)
                                                                                                                                    aaaacttttgtactagGGAAGGTGCGAATAAGCAGGTCATTTCTTCCCAAGCTGACTCGCTGATTAAAATTTCGCGGATCTGGGCCGATTTTTTTCCCGCAAACACATCGTATCAGCCTATTTAGGCTATTTTTTCCACCATTTCTGGc                  >  2:691290‑M1/17‑149 (MQ=255)
                                                                                                                                    aaaacttttgtactagGGAAGGTGCGAATAAGCAGGTCATTTCTTCCCAAGCTGACTCGCTGATTAAAATTTCGCGGATCTGGGCCGATTTTTTTCCCGCAAACACATCGAATCAGCCTATTTAGGCTATTTTTTCCACCATTTCTGGc                  <  1:456600‑M1/133‑1 (MQ=255)
                                                                                                                                         ttttgtactagGGAAGGTGCGAATAAGCAGGTCATTTCTTCCCAAGCTGACTCGCTGATTAAAATTTCGCGGATCTGGGCCGATTTTTTTCCCGCAAACACATCGAATCAGCCTATTTAGGCTATTTTTTCCACCATTTCTGGCGTTAt             >  1:691239‑M1/12‑149 (MQ=255)
                                                                                                                                            tgtactagGGAAGGTGCGAATAAGCAGGTCATTTCTTCCCAAGCTGACTCGCTGATTAAAATTTCGCGGATCTGGGCCGATTTTTTTCCCGCAAACACATCGAATCAGCCTATTTAGGCTATTTTTTCCACCATTTCTGGCGTTATTTc          <  2:456611‑M1/141‑1 (MQ=255)
                                                                                                                                             caacaaGGGAAGGTGCGAATAAGCAGGTCATTTCTTCCCAAGCTGACTCGCTGATTAAAATTTCGCGGATCTGGGCCGATTTTTTTCCCGCAAACACATCGAATCAGCCTATTTAGGCTATTTTTTCCACCATTTCTGGCGTTATTTcc         <  2:456542/149‑1 (MQ=255)
                                                                                                                                               acaaGGGAAGGTGCGAATAAGCAGGTCATTTCTTCCCAAGCTGACTCGCTGATTAAAATTTCGCGGATCTGGGCCGATTTTTTTCCCGCAAACACATCGAATCAGCCTATTTAGGCTATTTTTTCCACCATTTCTGGCGTTATTTCCgg       <  2:456544/149‑1 (MQ=255)
                                                                                                                                                 tagGGAAGGTGCGAATAAGCAGGTCATTTCTTCCCAAGCTGACTCGCTGATTAAAATTTCGCGGATCTGGGCCGATTTTTTTCCCGCAAACACATCGAATCAGCCTATTTAGGCTATTTTTTCCACCATTTCTGGCGTTATTTCCGGt      >  1:456545‑M1/4‑148 (MQ=255)
                                                                                                                                                    ggAAGGTGCGAATAAGCAGGTCATTTCTTCCCAAGCTGACTCGCTGATTAAAATTTCGCGGATCTGGGCCGATTTTTTTCCCGCAAACACATCGAATCAGCCTATTTAGGCTATTTTTTCCACCATTTCTGGCGTTATTTCCGGttttt  <  2:456546/149‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
AGATTCCGTGCGTAACCGCTGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACTGACAACAAGGGAAGGTGCGAATAAGCAGGTCATTTCTTCCCAAGCTGACTCGCTGATTAAAATTTCGCGGATCTGGGCCGATTTTTTTCCCGCAAACACATCGAATCAGCCTATTTAGGCTATTTTTTCCACCATTTCTGGCGTTATTTCCGGTTTTT  >  U00096/1427451‑1427747

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.