Predicted mutation
evidence seq id position mutation annotation gene description
JC AP012306 746,309 (TAATGTAA)1→2 intergenic (‑188/‑97) ybjG ← / → cmr undecaprenyl pyrophosphate phosphatase/multidrug efflux system protein

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? AP012306 = 7462970 (0.000)345 (1.160)
+GTAATAAT
183/258 0.1 100% intergenic (‑176/‑109) ybjG/cmr undecaprenyl pyrophosphate phosphatase/multidrug efflux system protein
?AP012306 746298 = 0 (0.000)intergenic (‑177/‑108) ybjG/cmr undecaprenyl pyrophosphate phosphatase/multidrug efflux system protein

Only 100 of 374 total aligned reads displayed.

GGGAGCCAATACAGGCAAGTCGTTGAGAATAAAGTGCAGGTTAAACTGGGTAAAGCGGCATCGTCTTATTTCCCTCAAGCGGCCTGTTTACGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCGTAATAATGTAAGAATGTGCTTAACCGTGGTTTCAGCTACAAAATTCGCTTTCTCGTTAGCTGCGCTTTTATTAAACTCTGCGCGATTATTATTGGCGAAGAAATTGCATGCAAAATAAATTAGCTTCCGGTGCCAGGCTTGGACGTCA  >  AP012306/746148‑746446
                                                                                                                                                     |                                                                                                                                                     
gggAGCCAATACAGGCAAGTCGTTGAGAATAAAGTGCAGGTTAAACTGGGTAAAGCGGCATCGTCTTATTTCCCTCAAGCGGCCTGTTTACGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTc                                                                                                                                                       <  2:974470/150‑1 (MQ=255)
gggAGCCAATACAGGCAAGTCGTTGAGAATAAAGTGCAGGTTAAACTGGGTAAAGCGGCATCGTCTTATTTCCCTCAAGCGGCCTGTTTACGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTc                                                                                                                                                       <  2:2494787/150‑1 (MQ=255)
gggAGCCAATACAGGCAAGTCGTTGAGAATAAAGTGCAGGTTAAACTGGGTAAAGCGGCATCGTCTTATTTCCCTAAAGCGGCCTGTTTACGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTc                                                                                                                                                       <  1:1010482/150‑1 (MQ=255)
    gCCAATACAGGCAAGTCGTTGAGAATAAAGTGCAGGTTAAACTGGGTAAAGCGGCATCGTCTTATTTCCCTCAAGCGGCCTGTTTACGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCgtaa                                                                                                                                                   <  2:1970539‑M1/150‑5 (MQ=255)
    gCCAATACAGGCAAGTCGTTGAGAATAAAGTGCAGGTTAAACTGGGTAAAGCGGCATCGTCTTATTTCCCTCAAGCGGCCTGTTTACGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCgtaa                                                                                                                                                   <  2:1860341‑M1/150‑5 (MQ=255)
      cAATACAGGCAAGTCGTTGAGAATAAAGTGCAGGTTAAACTGGGTAAAGCGGCATCGTCTTATTTCCCTCAAGCGGCCTGTTTACGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCgtaata                                                                                                                                                 <  2:726055‑M1/150‑7 (MQ=255)
       aaTACAGGCAAGTCGTTGAGAATAAAGTGCAGGTTAAACTGGGTAAAGCGGCATCGTCTTATTTCCCTCAAGCGGCCTGTTTACGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCgtaataa                                                                                                                                                <  2:3335094‑M1/150‑8 (MQ=255)
       aaTACAGGCAAGTCGTTGAGAATAAAGTGCAGGTTAAACTGGGTAAAGCGGCATCGTCTTATTTCCCTCAAGCGGCCTGTTTACGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCgtaataa                                                                                                                                                >  1:2728904‑M1/1‑143 (MQ=255)
        aTACAGGCAAGTCGTTGAGAATAAAGTGCAGGTTAAACTGGGTAAAGCGGCATCGTCTTATTTCCCTCAAGCGGCCTGTTTACGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCgtaataat                                                                                                                                               <  1:2300340‑M1/150‑9 (MQ=255)
          aCAGGCAAGTCGTTGAGAATAAAGTGCAGGTTAAACTGGGTAAAGCGGCATCGTCTTATTTCCCTCAAGCGGCCTGTTTACGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCgtaataatgt                                                                                                                                             <  1:3244393‑M1/150‑11 (MQ=255)
            aGGCAAGTCGTTGAGAATAAAGTGCAGGTTAAACTGGGTAAAGCGGCATCGTCTTATTTCCCTCAAGCGGCCTGTTTACGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCgtaataatgtaa                                                                                                                                           <  1:3732475‑M1/150‑13 (MQ=255)
             ggCAAGTCGTTGAGAATAAAGTGCAGGTTAAACTGGGTAAAGCGGCATCGTCTTATTTCCCTCAAGCGGCCTGTTTACGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCgtaataatgtaat                                                                                                                                          <  1:3855463‑M1/150‑14 (MQ=255)
              gCAAGTCGTTGAGAATAAAGTGCAGGTTAAACTGGGTAAAGCGGCATCGTCTTATTTCCCTCAAGCGGCCTGTTTACGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCgtaataatgtaata                                                                                                                                         <  1:2089487‑M1/150‑15 (MQ=255)
                  gTCGTTGAGAATAAAGTGCAGGTTAAACTGGGTAAAGCGGCATCGTCTTATTTCCCTCAAGCGGCCTGTTTACGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCgtaataatgtaataatgt                                                                                                                                     <  2:3842460‑M1/150‑19 (MQ=255)
                  gTCGTTGAGAATAAAGTGCAGGTTAAACTGGGTAAAGCGGCATCGTCTTATTTCCCTCAAGCGGCCTGTTTACGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCgtaataatgtaataatgt                                                                                                                                     <  2:3613059‑M1/150‑19 (MQ=255)
                  gTCGTTGAGAATAAAGTGCAGGTTAAACTGGGTAAAGCGGCATCGTCTTATTTCCCTCAAGCGGCCTGTTTACGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCgtaataatgtaataatgt                                                                                                                                     <  1:246786‑M1/150‑19 (MQ=255)
                  gTCGTTGAGAATAAAGTGCAGGTTAAACTGGGTAAAGCGGCATCGTCTTATTTCCCTCAAGCGGCCTGTTTACGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCgtaataatgtaataatgt                                                                                                                                     <  1:499058‑M1/150‑19 (MQ=255)
                   tCGTTGAGAATAAAGTGCAGGTTAAACTGGGTAAAGCGGCATCGTCTTATTTCCCTCAAGCGGCCTGTTTACGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCgtaataatgtaataatgta                                                                                                                                    >  2:1550960‑M1/1‑131 (MQ=255)
                     gTTGAGAATAAAGTGCAGGTTAAACTGGGTAAAGCGGCATCGTCTTATTTCCCTCAAGCGGCCTGTTTACGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCgtaataatgtaataatgtaag                                                                                                                                  >  1:2975947‑M1/1‑129 (MQ=255)
                          gaATAAAGTGCAGGTTAAACTGGGTAAAGCGGCATCGTCTTATTTCCCTCAAGCGGCCTGTTTACGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCgtaataatgtaataatgtaagaatgt                                                                                                                             <  2:3492391‑M1/150‑27 (MQ=255)
                            aTAAAGTGCAGGTTAAACTGGGTAAAGCGGCATCGTCTTATTTCCCTCAAGCGGCCTGTTTACGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCgtaataatgtaataatgtaagaatgtgc                                                                                                                           <  1:487534‑M1/150‑29 (MQ=255)
                             tAAAGTGCAGGTTAAACTGGGTAAAGCGGCATCGTCTTATTTCCCTCAAGCGGCCTGTTTACGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCgtaataatgtaataatgtaagaatgtgct                                                                                                                          <  2:1340144‑M1/150‑30 (MQ=255)
                                 gTGCAGGTTAAACTGGGTAAAGCGGCATCGTCTTATTTCCCTCAAGCGGCCTGTTTACGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCgtaataatgtaataatgtaagaatgtgcttaac                                                                                                                      <  2:3968027‑M1/150‑34 (MQ=255)
                                   gCAGGTTAAACTGGGTAAAGCGGCATCGTCTTATTTCCCTCAAGCGGCCTGTTTACGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCgtaataatgtaataatgtaagaatgtgcttaaccg                                                                                                                    <  2:283422‑M1/150‑36 (MQ=255)
                                    cAGGTTAAACTGGGTAAAGCGGCATCGTCTTATTTCCCTCAAGCGGCCTGTTTACGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCgtaataatgtaataatgtaagaatgtgcttaaccgt                                                                                                                   <  1:1515738‑M1/150‑37 (MQ=255)
                                     aGGTTAAACTGGGTAAAGCGGCATCGTCTTATTTCCCTCAAGCGGCCTGTTTACGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCgtaataatgtaataatgtaagaatgtgcttaaccgtg                                                                                                                  <  2:4237918‑M1/150‑38 (MQ=255)
                                        ttAAACTGGGTAAAGCGGCATCGTCTTATTTCCCTCAAGCGGCCTGTTTACGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCgtaataatgtaataatgtaagaatgtgcttaaccgtggtt                                                                                                               >  1:1715373‑M1/1‑110 (MQ=255)
                                        ttAAACTGGGTAAAGCGGCATCGTCTTATTTCCCTCAAGCGGCCTGTTTACGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCgtaataatgtaataatgtaagaatgtgcttaaccgtggtt                                                                                                               >  1:1865139‑M1/1‑110 (MQ=255)
                                             cTGGGTAAAGCGGCATCGTCTTATTTCCCTCAAGCGGCCTGTTTACGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCgtaataatgtaataatgtaagaatgtgcttaaccgtggtttcagc                                                                                                          <  1:4154036‑M1/150‑46 (MQ=255)
                                                  tAAAGCGGCATCGTCTTATTTCCCTCAAGCGGCCTGTTTACGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCgtaataatgtaataatgtaagaatgtgcttaaccgtggtttcagctacaa                                                                                                     >  2:2739144‑M1/1‑100 (MQ=255)
                                                       cGGCATCGTCTTATTTCCCTCAAGCGGCCTGTTTGCGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAGCTTAAAGAAAGCGTAGCTATACTCgtaataatttaataatgtaagaatgtgcttaaccgtggtttcagctacgaaattc                                                                                                <  2:3106962‑M1/150‑56 (MQ=255)
                                                       cGGCATCGTCTTATTTCCCTCAAGCGGCCTGTTTAGGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCgtaataatgtaataatgtaagaatgtgcttaaccgtggtttcagctacaaaattc                                                                                                <  1:2246271‑M1/150‑56 (MQ=255)
                                                       cGGCATCGTCTTATTTCCCTCAAGCGGCCTGTTTACGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCgtaataatgtaataatgtaagaatgtgcttaaccgtggtttcagctacaaaattc                                                                                                <  2:2807554‑M1/150‑56 (MQ=255)
                                                       cGGCATCGTCTTATTTCCCTCAAGCGGCCTGTTTACGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCgtaataatgtaataatgtaagaatgtgcttaaccgtggtttcagctacaaaattc                                                                                                >  2:59495‑M1/1‑95 (MQ=255)
                                                       cGGCATCGTCTTATTTCCCTCAAGCGGCCTGTTTACGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCgtaataatgtaataatgtaagaatgtgcttaaccgtggtttcagctacaaaattc                                                                                                <  2:1254615‑M1/150‑56 (MQ=255)
                                                       cGGCATCGTCTTATTTCCCTCAAGCGGCCTGTTTACGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCgtaataatgtaataatgtaagaatgtgcttaaccgtggtttcagctacaaaattc                                                                                                <  2:3531951‑M1/150‑56 (MQ=255)
                                                          cATCGTCTTATTTCCCTCAAGCGGCCTGTTTACGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCgtaataatgtaataatgtaagaatgtgcttaaccgtggtttcagctacaaaattcgct                                                                                             >  2:301947‑M1/1‑92 (MQ=255)
                                                          cATCGTCTTATTTCCCTCAAGCGGCCTGTTTACGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCgtaataatgtaataatgtaagaatgtgcttaaccgtggtttcagctacaaaattcgct                                                                                             >  1:3345059‑M1/1‑92 (MQ=255)
                                                           aTCGTCTTATTTCCCTCAAGCGGCCTGTTTACGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCgtaataatgtaataatgtaagaatgtgcttaaccgtggtttcagctacaaaattcgctt                                                                                            <  1:3448387‑M1/150‑60 (MQ=255)
                                                             cGTCTTATTTCCCTCAAGCGGCCTGTTTACGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCgtaataatgtaataatgtaagaatgtgcttaaccgtggtttcagctacaaaattcgctttc                                                                                          <  2:3134328‑M1/150‑62 (MQ=255)
                                                               tCTTATTTCCCTCAAGCGGCCTGTTTACGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCgtaataatgtaataatgtaagaatgtgcttaaccgtggtttcagctacaaaattcgctttctc                                                                                        >  1:3271179‑M1/1‑87 (MQ=255)
                                                                cTTATTTCCCTCAAGCGGCCTGTTTACGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCgtaataatgtaataatgtaagaatgtgcttaaccgtggtttcagctacaaaattcgctttctcg                                                                                       >  1:653849‑M1/1‑86 (MQ=255)
                                                                  tATTTCCCTCAAGCGGCCTGTTTACGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCgtaataatgtaataatgtaagaatgtgcttaaccgtggtttcagctacaaaattcgctttctcgtt                                                                                     <  2:320028‑M1/150‑67 (MQ=255)
                                                                   aTTTCCCTCAAGCGGCCTGTTTACGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCgtaataatgtaataatgtaagaatgtgcttaaccgtggtttcagctacaaaattcgctttctcgtta                                                                                    <  1:2864431‑M1/150‑68 (MQ=255)
                                                                   aTTTCCCTCAAGCGGCCTGTTTACGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCgtaataatgtaataatgtaagaatgtgcttaaccgtggtttcagctacaaaattcgctttctcgtta                                                                                    <  2:4175233‑M1/150‑68 (MQ=255)
                                                                   aTTTCCCTCAAGCGGCCTGTTTACGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCgtaataatgtaataatgtaagaatgtgcttaaccgtggtttcagctacaaaattcgctttctcgtta                                                                                    <  1:1908703‑M1/150‑68 (MQ=255)
                                                                    tttCCCTCAAGCGGCCTGTTTACGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCgtaataatgtaataatgtaagaatgtgcttaaccgtggtttcagctacaaaattcgctttctcgttag                                                                                   <  2:1395497‑M1/150‑69 (MQ=255)
                                                                       cccTCAAGCGGCCTGTTTACGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCgtaataatgtaataatgtaagaatgtgcttaaccgtggtttcagctacaaaattcgctttctcgttagctg                                                                                <  2:2029819‑M1/150‑72 (MQ=255)
                                                                         cTCAAGCGGCCTGTTTACGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCgtaataatgtaataatgtaagaatgtgcttaaccgtggtttcagctacaaaattcgctttctcgttagctgcg                                                                              <  1:1589175‑M1/150‑74 (MQ=255)
                                                                          tCAAGCGGCCTGTTTACGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCgtaataatgtaataatgtaagaatgtgcttaaccgtggtttcagctacaaaattcgctttctcgttagctgcgc                                                                             >  2:2131491‑M1/1‑76 (MQ=255)
                                                                          tCAAGCGGCCTGTTTACGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCgtaataatgtaataatgtaagaatgtgcttaaccgtggtttcagctacaaaattcgctttctcgttagctgcgc                                                                             <  2:4033070‑M1/150‑75 (MQ=255)
                                                                           cAAGCGGCCTGTTTACGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCgtaataatgtaataatgtaagaatgtgcttaaccgtggtttcagctacaaaattcgctttctcgttagctgcgct                                                                            >  1:3323904‑M1/1‑75 (MQ=255)
                                                                               cGGCCTGTTTACGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCgtaataatgtaataatgtaagaatgtgcttaaccgtggtttcagctacaaaattcgctttctcgttagctgcgctttta                                                                        <  1:1192559‑M1/150‑80 (MQ=255)
                                                                                ggCCTGTTTACGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCgtaataatgtaataatgtaagaatgtgcttaaccgtggtttcagctacaaaattcgctttctcgttagctgcgcttttat                                                                       >  2:1198911‑M1/1‑70 (MQ=255)
                                                                                 gCCTGTTTACGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCgtaataatgtaataatgtaagaatgtgcttaaccgtggtttcagctacaaaattcgctttctcgttagctgcgcttttatt                                                                      <  1:3938268‑M1/150‑82 (MQ=255)
                                                                                 gCCTGTTTACGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCgtaataatgtaataatgtaagaatgtgcttaaccgtggtttcagctacaaaattcgctttctcgttagctgcgcttttatt                                                                      >  2:1133982‑M1/1‑69 (MQ=255)
                                                                                  ccTGTTTACGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCgtaataatgtaataatgtaagaatgtgcttaaccgtggtttcagctacaaaattcgctttctcgttagctgcgcttttatta                                                                     <  2:2656297‑M1/150‑83 (MQ=255)
                                                                                    tGTTTACGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCgtaataatgtaataatgtaagaatgtgcttaaccgtggtttcagctacaaaattcgctttctcgttagctgcgcttttattaaa                                                                   <  2:3438508‑M1/150‑85 (MQ=255)
                                                                                     gTTTACGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCgtaataatgtaataatgtaagaatgtgcttaaccgtggtttcagctacaaaattcgctttctcgttagctgcgcttttattaaac                                                                  >  1:2670826‑M1/1‑65 (MQ=255)
                                                                                     gTTTACGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCgtaataatgtaataatgtaagaatgtgcttaaccgtggtttcagctacaaaattcgctttctcgttagctgcgcttttattaaac                                                                  <  1:447‑M1/150‑86 (MQ=255)
                                                                                      tttACGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCgtaataatgtaataatgtaagaatgtgcttaaccgtggtttcagctacaaaattcgctttctcgttagctgcgcttttattaaact                                                                 <  2:3918403‑M1/150‑87 (MQ=255)
                                                                                         aCGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCgtaataatgtaataatgtaagaatgtgcttaaccgtggtttcagctacaaaattcgctttctcgttagctgcgcttttattaaactctg                                                              <  2:2226703‑M1/150‑90 (MQ=255)
                                                                                              gggtgATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCgtaataatgtaataatgtaagaatgtgcttaaccgtggtttcagctacaaaattcgctttctcgttagctgcgcttttattaaactctgcgcga                                                         >  2:1369800‑M1/1‑56 (MQ=255)
                                                                                                gtgATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCgtaataatgtaataatgtaagaatgtgcttaaccgtggtttcagctacaaaattcgctttctcgttagctgcgcttttattaaactctgcgcgatt                                                       >  2:3604398‑M1/1‑54 (MQ=255)
                                                                                                gtgATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCgtaataatgtaataatgtaagaatgtgcttaaccgtggtttcagctacaaaattcgctttctcgttagctgcgcttttattaaactctgcgcgatt                                                       <  1:1478012‑M1/150‑97 (MQ=255)
                                                                                                 tgATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCgtaataatgtaataatgtaagaatgtgcttaaccgtggtttcagctacaaaattcgctttctcgttagctgcgcttttattaaactctgcgcgatta                                                      >  2:160205‑M1/1‑53 (MQ=255)
                                                                                                   aTTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCgtaataatgtaataatgtaagaatgtgcttaaccgtggtttcagctacaaaattcgctttctcgttagctgcgcttttattaaactctgcgcgattatt                                                    <  2:3680164‑M1/150‑100 (MQ=255)
                                                                                                        aaCGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCgtaataatgtaataatgtaagaatgtgcttaaccgtggtttcagctacaaaattcgctttctcgttagctgcgcttttattaaactctgcgcgattattattgg                                               <  1:886085‑M1/150‑105 (MQ=255)
                                                                                                           gggCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCgtaataatgtaataatgtaagaatgtgcttaaccgtggtttcagctacaaaattcgctttctcgttagctgcgcttttattaaactctgcgcgattattattggcga                                            >  2:1704759‑M1/1‑43 (MQ=255)
                                                                                                           gggCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCgtaataatgtaataatgtaagaatgtgcttaaccgtggtttcagctacaaaattcgctttctcgttagctgcgcttttattaaactctgcgcgattattattggcga                                            >  2:52518‑M1/1‑43 (MQ=255)
                                                                                                             gCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCgtaataatgtaataatgtaagaatgtgcttaaccgtggtttcagctacaaaattcgctttctcgttagctgcgcttttattaaactctgcgcgattattattggcgaag                                          <  2:477090‑M1/150‑110 (MQ=255)
                                                                                                             gCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCgtaataatgtaataatgtaagaatgtgcttaaccgtggtttcagctacaaaattcgctttctcgttagctgcgcttttattaaactctgcgcgattattattggcgaag                                          <  2:1011163‑M1/150‑110 (MQ=255)
                                                                                                                tAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCgtaataatgtaataatgtaagaatgtgcttaaccgtggtttcagctacaaaattcgctttctcgttagctgcgcttttattaaactctgcgcgattattattggcgaagaaa                                       >  1:320041‑M1/1‑38 (MQ=255)
                                                                                                                tAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCgtaataatgtaataatgtaagaatgtgcttaaccgtggtttcagctacaaaattcgctttctcgttagctgcgcttttattaaactctgcgcgattattattggcgaagaaa                                       <  1:180498‑M1/150‑113 (MQ=255)
                                                                                                                 aGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCgtaataatgtaataatgtaagaatgtgcttaaccgtggtttcagctacaaaattcgctttctcgttagctgcgcttttattaaactctgcgcgattattattggcgaagaaat                                      <  1:725582‑M1/150‑114 (MQ=255)
                                                                                                                 aGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCgtaataatgtaataatgtaagaatgtgcttaaccgtggtttcagctacaaaattcgctttctcgttagctgcgcttttattaaactctgcgcgattattattggcgaagaaat                                      <  1:2663316‑M1/150‑114 (MQ=255)
                                                                                                                  ggTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCgtaataatgtaataatgtaagaatgtgcttaaccgtggtttcagctacaaaattcgctttctcgttagctgcgcttttattaaactctgcgcgattattattggcgaagaaatt                                     <  1:4089489‑M1/150‑115 (MQ=255)
                                                                                                                        ataaaACTTAAAGAAAGCGTAGCTATACTCgtaataatgtaataatgtaagaatgtgcttaaccgtggtttcagctacaaaattcgctttctcgttagctgcgcttttattaaactctgcgcgattattattggcgaagaaattgcatgc                               <  1:1689701‑M1/150‑121 (MQ=255)
                                                                                                                        ataaaACTTAAAGAAAGCGTAGCTATACTCgtaataatgtaataatgtaagaatgtgcttaaccgtggtttcagctacaaaattcgctttctcgttagctgcgcttttattaaactctgcgcgattattattggcgaagaaattgcatgc                               <  1:3668033‑M1/150‑121 (MQ=255)
                                                                                                                         taaaACTTAAAGAAAGCGTAGCTATACTCgtaataatgtaataatgtaagaatgtgcttaaccgtggtttcagctacaaaattcgctttctcgttagctgcgcttttattaaactctgcgcgattattattggcgaagaaattgcatgca                              <  2:3763868‑M1/150‑122 (MQ=255)
                                                                                                                          aaaaCTTAAAGAAAGCGTAGCTATACTCgtaataatgtaataatgtaagaatgtgcttaaccgtggtttcagctacaaaattcgctttctcgttagctgcgcttttattaaactctgcgcgattattattggcgaagaaattgcatgcaa                             >  2:2179207‑M1/1‑28 (MQ=255)
                                                                                                                           aaaCTTAAAGAAAGCGTAGCTATACTCgtaataatgtaataatgtaagaatgtgcttaaccgtggtttcagctacaaaattcgctttctcgttagctgcgcttttattaaactctgcgcgattattattggcgaagaaattgcatgcaaa                            <  2:2153660‑M1/150‑124 (MQ=255)
                                                                                                                           aaaCTTAAAGAAAGCGTAGCTATACTCgtaataatgtaataatgtaagaatgtgcttaaccgtggtttcagctacaaaattcgctttctcgttagctgcgcttttattaaactctgcgcgattattattggcgaagaaattgcatgcaaa                            <  2:1627014‑M1/150‑124 (MQ=255)
                                                                                                                           aaaCTTAAAGAAAGCATAGCTATACTCgtaataatgtaataatgtaagaatgtgcttaaccgtggtttcagctacaaaattcgctttctcgttagctgcgcttttattaaactctgcgcgattattattggcgaagaaattgcatgcaaa                            >  2:1309925‑M1/1‑27 (MQ=255)
                                                                                                                            aaCTTAAAGAAAGCGTAGCTATACTCgtaataatgtaataatgtaagaatgtgcttaaccgtggtttcagctacaaaattcgctttctcgttagctgcgcttttattaaactctgcgcgattattattggcgaagaaattgcatgcaaaa                           <  1:1120740‑M1/150‑125 (MQ=255)
                                                                                                                                  aagaaagCGTAGCTATACTCgtaataatgtaataatgtaagaatgtgcttaaccgtggtttcagctacaaaattcgctttctcgttagctgcgcttttattaaactctgcgcgattattattggcgaagaaattgcatgcaaaataaatt                     >  1:2845358‑M1/1‑20 (MQ=255)
                                                                                                                                  aagaaagCGTAGCTATACTCgtaataatgtaataatgtaagaatgtgcttaaccgtggtttcagctacaaaattcgctttctcgttagctgcgcttttattaaactctgcgcgattattattggcgaagaaattgcatgcaaaataaatt                     >  1:2376496‑M1/1‑20 (MQ=255)
                                                                                                                                    gaaagCGTAGCTATACTCgtaataatgtaataatgtaagaatgtgcttaaccgtggtttcagctacaaaattcgctttctcgttagctgcgcttttattaaactctgcgcgattattattggcgaagaaattgcatgcaaaataaattag                   >  2:2923240‑M1/1‑18 (MQ=255)
                                                                                                                                    gaaagCGTAGCTATACTCgtaataatgtaataatgtaagaatgtgcttaaccgtggtttcagctacaaaattcgctttctcgttagctgcgcttttattaaactctgcgcgattattattggcgaagaaattgcatgcaaaataaattag                   >  1:3556213‑M1/1‑18 (MQ=255)
                                                                                                                                     aaagCGTAGCTATACTCgtaataatgtaataatgtaagaatgtgcttaaccgtggtttcagctacaaaattcgctttctcgttagctgcgcttttattaaactctgcgcgattattattggcgaagaaattgcatgcaaaataaattagc                  >  1:185125‑M1/1‑17 (MQ=255)
                                                                                                                                      aagCGTAGCTATACTCgtaataatgtaataatgtaagaatgtgcttaaccgtggtttcagctacaaaattcgctttctcgttagctgcgcttttattaaactctgcgcgattattattggcgaagaaattgcatgcaaaataaattagct                 >  2:14604‑M1/1‑16 (MQ=255)
                                                                                                                                       agCGTAGCTATACTCgtaataatgtaataatgtaagaatgtgcttaaccgtggtttcagctacaaaattcgctttctcgttagctgcgcttttattaaactctgcgcgattattattggcgaagaaattgcatgcaaaataaattagctt                <  2:2416467‑M1/150‑136 (MQ=255)
                                                                                                                                       agCGTAGCTATACTCgtaataatgtaataatgtaagaatgtgcttaaccgtggtttcagctacaaaattcgctttctcgttagctgcgcttttattaaactctgcgcgattattattggcgaagaaattgcatgcaaaataaattagctt                <  1:1318753‑M1/150‑136 (MQ=255)
                                                                                                                                         cGTAGCTATACTCgtaataatgtaataatgtaagaatgtgcttaaccgtggtttcagctacaaaattcgctttctcgttagctgcgcttttattaaactctgcgcgattattattggcgaagaaattgcatgcaaaataaattagcttcc              >  2:881040‑M1/1‑13 (MQ=255)
                                                                                                                                           tAGCTATACTCgtaataatgtaataatgtaagaatgtgcttaaccgtggtttcagctacaaaattcgctttctcgttagctgcgcttttattaaactctgcgcgattattattggcgaagaaattgcatgcaaaataaattagcttccgg            <  1:3177562‑M1/150‑140 (MQ=255)
                                                                                                                                            aGCTATACTCgtaataatgtaataatgtaagaatgtgcttaaccgtggtttcagctacaaaattcgctttctcgttagctgcgcttttattaaactctgcgcgattattattggcgaagaaattgcatgcaaaataaattagcttccggt           <  2:1796382‑M1/150‑141 (MQ=255)
                                                                                                                                               tataCTCgtaataatgtaataatgtaagaatgtgcttaaccgtggtttcagctacaaaattcgctttctcgttagctgcgcttttattaaactctgcgcgattattattggcgaagaaattgcatgcaaaataaattagcttccggtgcc        >  2:1508467‑M1/1‑7 (MQ=255)
                                                                                                                                                 taCTCgtaataatgtaataatgtaagaatgtgcttaaccgtggtttcagctacaaaattcgctttctcgttagctgcgcttttattaaactctgcgcgattattattggcgaagaaattgcatgcaaaataaattagcttccggtgccag      <  1:2800897‑M1/150‑146 (MQ=255)
                                                                                                                                                     cgtaataatgtaataatgtaagaatgtgcttaaccgtggtttcagctacaaaattcgctttctcgttagctgcgcttttattaaactctgcgcgattattattggcgaagaaattgcatgcaaaataaattagcttccggtgccaggctt  <  2:2371742‑M1/150‑150 (MQ=255)
                                                                                                                                                     cgtaataatgtaataatgtaagaatgtgcttaaccgtggtttcagctacaaaattcgctttctcgttagctgcgcttttattaaactctgcgcgattattattggcgaagaaattgcatgcaaaataaattagcttccggtgccaggctt  <  1:1778099‑M1/150‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
GGGAGCCAATACAGGCAAGTCGTTGAGAATAAAGTGCAGGTTAAACTGGGTAAAGCGGCATCGTCTTATTTCCCTCAAGCGGCCTGTTTACGGTGGGTGATTGTAACGGGCATAGGTTAAATAAAACTTAAAGAAAGCGTAGCTATACTCGTAATAATGTAAGAATGTGCTTAACCGTGGTTTCAGCTACAAAATTCGCTTTCTCGTTAGCTGCGCTTTTATTAAACTCTGCGCGATTATTATTGGCGAAGAAATTGCATGCAAAATAAATTAGCTTCCGGTGCCAGGCTTGGACGTCA  >  AP012306/746148‑746446

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.