| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | AP012306 | 2,318,050 | Δ3,691 bp | [proX]–[mprA] | [proX], ygaX, ygaZ, ygaH, [mprA] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | AP012306 | 2318050 | 2321740 | 3691 | 256 [0] | [1] 259 | [proX]–[mprA] | [proX],ygaX,ygaZ,ygaH,[mprA] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP012306 | = 2318049 | 0 (0.000) | 248 (0.790) | 166/290 | 0.4 | 99.8% | coding (383/993 nt) | proX | glycine betaine transporter subunit |
| ? | AP012306 | 2321741 = | 1 (0.000) | coding (437/531 nt) | mprA | DNA‑binding transcriptional regulator | |||||
Only 100 of 256 total aligned reads displayed.
GCAACCTTCACCGCCGTGAACTGGACGCCACTGCATGACAACATGTACGAAGCTGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGATTTAACCGGTTGTAACCCTGGCTGGGGCTGCGAAGGTGCGATCAACCACCAGCTTGCCGCGTATGAACTGACCA > AP012306/2317901‑2318198 | gccccgccgtgaACTGGACGCCACTGCATGACAACATGTACGAAGCTGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAcagaaaaa < 2:2251182‑M1/147‑9 (MQ=255) ccccgccgtgAACTGGACGCCACTGCATGACAACATGTACGAAGCTGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAcagaaaaag < 1:3291968‑M1/148‑10 (MQ=255) aCCGCCGTGAACTGGACGCCACTGCATGACAACATGTACGAAGCTGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAcagaaaaaga > 1:1429284‑M1/1‑140 (MQ=255) ccgccgTGAACTGGACGCCACTGCATGACAACATGTACGAAGCTGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTCCCTGATCGATAAGAAAACCGCCGACCAGTACAAcagaaaaagat < 1:1180650‑M1/150‑12 (MQ=255) ccgccgTGAACTGGACGCCACTGCATGACAACATGTACGAAGCTGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAcagaaaaagat < 1:3904088‑M1/150‑12 (MQ=255) ccgccgTGAACTGGACGCCACTGCATGACAACATGTACGAAGCTGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCAAAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAcagaaaaagat < 1:3798879‑M1/150‑12 (MQ=255) gtaaactgGACGCCACTGCATGACAACATGTACGAAGCTGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAcagaaaaagatcagct < 1:2826357‑M1/147‑17 (MQ=255) aaCTGGACGCCACTGCATGACAACATGTACGAAGCTGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAcagaaaaagatcagctcga < 1:3977094‑M1/150‑20 (MQ=255) aaCTGGACGCCACTGCATGACAACATGTACGAAGCTGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAcagaaaaagatcagctcga > 1:2938945‑M1/1‑131 (MQ=255) aCTGGACGCCACTGCATGACAACATGTACGAAGCTGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGTTAAGAAAACCGCCGACCAGTACAAcagaaaaagatcagctcgag > 1:3531839‑M1/1‑130 (MQ=255) aCTGGACGCCACTGCATGACAACATGTACGAAGCTGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAcagaaaaagatcagctcgag > 1:2700193‑M1/1‑130 (MQ=255) ggACGCCACTGCATGACAACATGTACGAAGCTGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAcagaaaaagatcagctcgagcaa < 1:3576023‑M1/150‑24 (MQ=255) cGCCACTGCATGACAACATGTACGAAGCTGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAcagaaaaagatcagctcgagcaaatc > 1:3105681‑M1/1‑124 (MQ=255) cGCCACTGCATGACAACATGTACGAAGCTGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAcagaaaaagatcagctcgagcaaatc > 1:219670‑M1/1‑124 (MQ=255) aCTGCATGACAACATGTACGAAGCTGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAcagaaaaagatcagctcgagcaaatcaccc > 2:3687103‑M1/1‑120 (MQ=255) cATGACAACATGTACGAAGCTGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAcagaaaaagatcagctcgagcaaatcacccgcaa < 1:1958281‑M1/150‑35 (MQ=255) gACAACATGTACGAAGCTGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAcagaaaaagatcagctcgagcaaatcacccgcaaatt < 1:4239881‑M1/150‑38 (MQ=255) gACAACATGTACGAAGCTGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAcagaaaaagatcagctcgagcaaatcacccgcaaatt < 1:1286171‑M1/150‑38 (MQ=255) acaacaTGTACGAAGCTGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAcagaaaaagatcagctcgagcaaatcacccgcaaattg < 1:1691352‑M1/150‑39 (MQ=255) caacaTGTACGAAGCTGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAcagaaaaagatcagctcgagcaaatcacccgcaaattgc > 2:1383247‑M1/1‑111 (MQ=255) aacaTGTACGAAGCTGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAcagaaaaagatcagctcgagcaaatcacccgcaaattgct > 2:733943‑M1/1‑110 (MQ=255) aacaTGTACGAAGCTGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAcagaaaaagatcagctcgagcaaatcacccgcaaattgct > 2:513965‑M1/1‑110 (MQ=255) aacaTGTACGAAGCTGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGGATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAcagaaaaagatcagctcgagcaaatcacccgcaaattgct > 2:3530765‑M1/1‑110 (MQ=255) caTGTACGAAGCTGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAcagaaaaagatcagctcgagcaaatcacccgcaaattgctct < 2:2518647‑M1/150‑43 (MQ=255) aCGAAGCTGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAcagaaaaagatcagctcgagcaaatcacccgcaaattgctctcccgt > 2:598076‑M1/1‑103 (MQ=255) cGAAGCTGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAcagaaaaagatcagctcgagcaaatcacccgcaaattgctctcccgtc > 1:2112759‑M1/1‑102 (MQ=255) gAAGCTGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAcagaaaaagatcagctcgagcaaatcacccgcaaattgctctcccgtct < 1:2493868‑M1/150‑50 (MQ=255) gAAGCTGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAcagaaaaagatcagctcgagcaaatcacccgcaaattgctctcccgtct > 1:2610290‑M1/1‑101 (MQ=255) aaGCTGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAcagaaaaagatcagctcgagcaaatcacccgcaaattgctctcccgtctc > 1:1891706‑M1/1‑100 (MQ=255) ggTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAcagaaaaagatcagctcgagcaaatcacccgcaaattgctctcccgtctcgaccagat < 1:3002183‑M1/150‑59 (MQ=255) ggTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAcagaaaaagatcagctcgagcaaatcacccgcaaattgctctcccgtctcgaccagat < 1:399360‑M1/150‑59 (MQ=255) tGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAcagaaaaagatcagctcgagcaaatcacccgcaaattgctctcccgtctcgaccagatgg > 2:8627‑M1/1‑90 (MQ=255) tGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAcagaaaaagatcagctcgagcaaatcacccgcaaattgctctcccgtctcgaccagatgg > 2:3824615‑M1/1‑90 (MQ=255) cGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAcagaaaaagatcagctcgagcaaatcacccgcaaattgctctcccgtctcgaccagatggaac > 1:4371447‑M1/1‑87 (MQ=255) cGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAcagaaaaagatcagctcgagcaaatcacccgcaaattgctctcccgtctcgaccagatggaac < 1:503796‑M1/150‑64 (MQ=255) gATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAcagaaaaagatcagctcgagcaaatcacccgcaaattgctctcccgtctcgaccagatggaaca > 1:2355459‑M1/1‑86 (MQ=255) gATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAcagaaaaagatcagctcgagcaaatcacccgcaaattgctctcccgtctcgaccagatggaaca > 2:2135539‑M1/1‑86 (MQ=255) tAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAcagaaaaagatcagctcgagcaaatcacccgcaaattgctctcccgtctcgaccagatggaacaag < 1:3119634‑M1/150‑67 (MQ=255) aaGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAcagaaaaagatcagctcgagcaaatcacccgcaaattgctctcccgtctcgaccagatggaacaaga > 2:672987‑M1/1‑83 (MQ=255) aaGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAcagaaaaagatcagctcgagcaaatcacccgcaaattgctctcccgtctcgaccagatggaacaaga > 2:2164735‑M1/1‑83 (MQ=255) aaGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAcagaaaaagatcagctcgagcaaatcacccgcaaattgctctcccgtctcgaccagatggaacaaga > 2:747975‑M1/1‑83 (MQ=255) aGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAcagaaaaagatcagctcgagcaaatcacccgcaaattgctctcccgtctcgaccagatggaacaagac > 2:259874‑M1/1‑82 (MQ=255) aGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAcagaaaaagatcagctcgagcaaatcacccgcaaattgctctcccgtctcgaccagatggaacaagac > 2:3014373‑M1/1‑82 (MQ=255) gAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAcagaaaaagatcagctcgagcaaatcacccgcaaattgctctcccgtctcgaccagatggaacaagacg > 2:1113984‑M1/1‑81 (MQ=255) aaTTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAcagaaaaagatcagctcgagcaaatcacccgcaaattgctctcccgtctcgaccagatggaacaagacggt > 2:2093564‑M1/1‑79 (MQ=255) aTTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAcagaaaaagatcagctcgagcaaatcacccgcaaattgctctcccgtctcgaccagatggaacaagacggtg < 1:221179‑M1/150‑73 (MQ=255) ttttATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAcagaaaaagatcagctcgagcaaatcacccgcaaattgctctcccgtctcgaccagatggaacaagacggtgt > 1:803305‑M1/1‑77 (MQ=255) tttATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAcagaaaaagatcagctcgagcaaatcacccgcaaattgctctcccgtctcgaccagatggaacaagacggtgtg > 2:4008228‑M1/1‑76 (MQ=255) tttATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAcagaaaaagatcagctcgagcaaatcacccgcaaattgctctcccgtctcgaccagatggaacaagacggtgtg > 1:3752368‑M1/1‑76 (MQ=255) tttATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAcagaaaaagatcagctcgagcaaatcacccgcaaattgctctcccgtctcgaccagatggaacaagacggtgtg > 1:604937‑M1/1‑76 (MQ=255) tCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAcagaaaaagatcagctcgagcaaatcacccgcaaattgctctcccgtctcgaccagatggaacaagacggtgtggttc < 1:3145990‑M1/150‑79 (MQ=255) cGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAcagaaaaagatcagctcgagcaaatcacccgcaaattgctctcccgtctcgaccagatggaacaagacggtgtggttct > 1:17852‑M1/1‑71 (MQ=255) gTGAAGGGGTATTTGTTAACGGCGCGGCACAGTGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAcagaaaaagatcagctcgagcaaatcacccgcaaattgctctcccgtctcgaccagatggaacaagacggtgtggttctc < 2:4174574‑M1/150‑81 (MQ=255) gTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAcagaaaaagatcagctcgagcaaatcacccgcaaattgctctcccgtctcgaccagatggaacaagacggtgtggttctc > 1:120072‑M1/1‑70 (MQ=255) gAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAcagaaaaagatcagctcgagcaaatcacccgcaaattgctctcccgtctcgaccagatggaacaagacggtgtggttctcga > 2:428722‑M1/1‑68 (MQ=255) gAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAcagaaaaagatcagctcgagcaaatcacccgcaaattgctctcccgtctcgaccagatggaacaagacggtgtggttctcga > 2:2331433‑M1/1‑68 (MQ=255) aGGGGTATTTGTTAACGGCGCGGCCCAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAcagaaaaagatcagctcgagcaaatcccccgcaaattgctctcccgtctcgaccagatggaacaagacggtgtggttctcgaag < 1:1084449‑M1/150‑85 (MQ=255) gggTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAcagaaaaagatcagctcgagcaaatcacccgcaaattgctctcccgtctcgaccagatggaacaagacggtgtggttctcgaagcg > 1:1747547‑M1/1‑64 (MQ=255) gTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAcagaaaaagatcagctcgagcaaatcacccgcaaattgctctcccgtctcgaccagatggaacaagacggtgtggttctcgaagcgat > 2:540218‑M1/1‑62 (MQ=255) aTTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAcagaaaaagatcagctcgagcaaatcacccgcaaattgctctcccgtctcgaccagatggaacaagacggtgtggttctcgaagcgatga > 2:1025989‑M1/1‑60 (MQ=255) tAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAcagaaaaagatcagctcgagcaaatcacccgcaaattgctctcccgtctcgaccagatggaacaagacggtgtggttctcgaagcgatgagctaac < 1:878806‑M1/150‑97 (MQ=255) aaCGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAcagaaaaagatcagctcgagcaaatcacccgcaaattgctctcccgtctcgaccagatggaacaagacggtgtggttctcgaagcgatgagctaacg > 2:2770671‑M1/1‑53 (MQ=255) cGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAcagaaaaagatcagctcgagcaaatcacccgcaaattgctctcccgtctcgaccagatggaacaagacggtgtggttctcgaagcgatgagctaacgcg < 1:1062866‑M1/150‑100 (MQ=255) ggCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAcagaaaaagatcagctcgagcaaatcacccgcaaattgctctcccgtctcgaccagatggaacaagacggtgtggttctcgaagcgatgagctaacgcgt > 1:2591227‑M1/1‑50 (MQ=255) ggCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAcagaaaaagatcagctcgagcaaatcacccgcaaattgctctcccgtctcgaccagatggaacaagacggtgtggttctcgaagcgatgagctaacgcgtcatct > 1:1659571‑M1/1‑45 (MQ=255) caGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAcagaaaaagatcagctcgagcaaatcacccgcaaattgctctcccgtctcgaccagatggaacaagacggtgtggttctcgaagcgatgagctaacgcgtcatctcgct > 1:599220‑M1/1‑41 (MQ=255) ggTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAcagaaaaagatcagctcgagcaaatcacccgcaaattgctctcccgtctcgaccagatggaacaagacggtgtggttctcgaagcgatgagctaacgcgtcatctcgctcaa > 1:1553465‑M1/1‑38 (MQ=255) ttACCTGATCGATAAGAAAACCGCCGACCAGTACAAcagaaaaagatcagctcgagcaaatcacccgcaaattgctctcccgtctcgaccagatggaacaagacggtgtggttctcgaagcgatgagctaacgcgtcatctcgctcaaaa < 1:3167985‑M1/150‑115 (MQ=255) tACCTGATCGATAAGAAAACCGCCGACCAGTACAAcagaaaaagatcagctcgagcaaatcacccgcaaattgctctcccgtctcgaccagatggaacaagacggtgtggttctcgaagcgatgagctaacgcgtcatctcgctcaaaaa < 1:3463760‑M1/150‑116 (MQ=255) tGATCGATAAGAAAACCGCCGACCAGTACAAcagaaaaagatcagctcgagcaaatcacccgcaaattgctctcccgtctcgaccagatggaacaagacggtgtggttctcgaagcgatgagctaacgcgtcatctcgctcaaaaatcca < 1:2821046‑M1/150‑120 (MQ=255) gATCGATAAGAAAACCGCCGACCAGTACAAcagaaaaagatcagctcgagcaaatcacccgcaaattgctctcccgtctcgaccagatggaacaagacggtgtggttctcgaagcgatgagctaacgcgtcatctcgctcaaaaatccag > 1:3718131‑M1/1‑30 (MQ=255) aTCGATAAGAAAACCGCCGACCAGTACAAcagaaaaagatcagctcgagcaaatcacccgcaaattgctctcccgtctcgaccagatggaacaagacggtgtggttctcgaagcgatgagctaacgcgtcatctcgctcaaaaatccaga < 1:763530‑M1/150‑122 (MQ=255) aTCGATAAGAAAACCGCCGACCAGTACAAcagaaaaagatcagctcgagcaaatcacccgcaaattgctctcccgtctcgaccagatggaacaagacggtgtggttctcgaagcgatgagctaacgcgtcatctcgctcaaaaatccaga < 2:1815151‑M1/150‑122 (MQ=255) tCGATAAGAAAACCGCCGACCAGTACAAcagaaaaagatcagctcgagcaaatcacccgcaaattgctctcccgtctcgaccagatggaacaagacggtgtggttctcgaagcgatgagctaacgcgtcatctcgctcaaaaatccagat < 1:3308838‑M1/150‑123 (MQ=255) tCGATAAGAAAACCGCCGACCAGTACAAcagaaaaagatcagctcgagcaaatcacccgcaaattgctctcccgtctcgaccagatggaacaagacggtgtggttctcgaagcgatgagctaacgcgtcatctcgctcaaaaatccagat > 2:3208306‑M1/1‑28 (MQ=255) gATAAGAAAACCGCCGACCAGTACAAcagaaaaagatcagctcgagcaaatcacccgcaaattgctctcccgtctcgaccagatggaacaagacggtgtggttctcgaagcgatgagctaacgcgtcatctcgctcaaaaatccagattt > 2:4046369‑M1/1‑26 (MQ=255) gATAAGAAAACCGCCGACCAGTACAAcagaaaaagatcagctcgagcaaatcacccgcaaattgctctcccgtctcgaccagatggaacaagacggtgtggttctcgaagcgatgagctaacgcgtcatctcgctcaaaaatccagattt > 1:1592033‑M1/1‑26 (MQ=255) atatGAAAACCGCCGACCAGTACAAcagaaaaagatcagctcgagcaaatcacccgcaaattgctctcccgtctcgaccagatggaacaagacggtgtggttctcgaagcgatgagctaacgcgtcatctcgctcaaaaatccagattta < 1:3433276‑M1/150‑126 (MQ=255) aTAAGAAAACCGCCGACCAGTACAAcagaaaaagatcagctcgagcaaatcacccgcaaattgctctcccgtctcgaccagatggaacaagacggtgtggttctcgaaacgatgagctaacgcgtcatctcgctcaaaaatccagattta < 1:363599‑M1/150‑126 (MQ=255) aaGAAAACCGCCGACCAGTACAAcagaaaaagatcagctcgagcaaatcacccgcaaattgctctcccgtctcgaccagatggaacaagacggtgtggttctcgaagcgatgagctaacgcgtcatctcgctcaaaaatccagatttata < 1:1849926‑M1/150‑128 (MQ=255) aaGAAAACCGCCGACCAGTACAAcagaaaaagatcagctcgagcaaatcacccgcaaattgctctcccgtctcgaccagatggaacaagacggtgtggttctcgaagcgatgagctaacgcgtcatctcgctcaaaaatccagatttata < 2:436742‑M1/150‑128 (MQ=255) aaagCCGCCGACCAGTACAAcagaaaaagatcagctcgagcaaatcacccgcaaattgctctcccgtctcgaccagatggaacaagacggtgtggttctcgaagcgatgagctaacgcgtcatctcgctcaaaaatccagatttataaaa < 1:3886821‑M1/150‑131 (MQ=255) aCCGCCGACCAGTACAAcagaaaaagatcagctcgagcaaatcacccgcaaattgctctcccgtctcgaccagatggaacaagacggtgtggttctcgaagcgatgagctaacgcgtcatctcgctcaaaaatccagatttataaaagaa > 1:2413484‑M1/1‑17 (MQ=255) aCCGCCGACCAGTACAAcagaaaaagatcagctcgagcaaatcacccgcaaattgctctcccgtctcgaccagatggaacaagacggtgtggttctcgaagcgatgagctaacgcgtcatctcgctcaaaaatccagatttataaaagaa < 1:463445‑M1/150‑134 (MQ=255) cgccgACCAGTACAAcagaaaaagatcagctcgagcaaatcacccgcaaattgctctcccgtctcgaccagatggaacaagacggagtggatctcgaagcgatgagctaacgcgtcatctcgctcaaaaatccagatttataaaagaaaa > 1:1055387‑M1/1‑15 (MQ=255) gccgACCAGTACAAcagaaaaagatcagctcgagcaaatcacccgcaaattgctctcccgtctcgaccagatggaacaagacggtgtggttctcgaagcgatgagctaacgcgtcatctcgctcaaaaatccagatttataaaagaaaaa > 1:2853284‑M1/1‑14 (MQ=255) ccgACCAGTACAAcagaaaaagatcagctcgagcaaatcacccgcaaattgctctcccgtctcgaccagatggaacaagacggtgtggttctcgaagcgatgagctaacgcgtcatctcgctcaaaaatccagatttataaaagaaaaaa > 1:2073661‑M1/1‑13 (MQ=255) ccgACCAGTACAAcagaaaaagatcagctcgagcaaatcacccgcaaattgctctcccgtctcgaccagatggaacaagacggtgtggttctcgaagcgatgagctaacgcgtcatctcgctcaaaaatccagatttataaaagaaaaaa < 1:2698956‑M1/150‑138 (MQ=255) ccgACCAGTACAAcagaaaaagatcagctcgagcaaatcacccgcaaattgctctcccgtctcgaccagatggaacaagacggtgtggttctcgaagcgatgagctaacgcgtcatctcgctcaaaaatccagatttataaaagaaaaaa < 1:564246‑M1/150‑138 (MQ=255) ccgACCAGTACAAcagaaaaagatcagctcgagcaaatcacccgcaaattgctctcccgtctcgaccagatggaacaagacggtgtggctctcgaagcgatgagctaacgcgtcatctcgctcaaaaatccagatttataaaagaaaaaa > 2:1947735‑M1/1‑13 (MQ=255) gACCAGTACAAcagaaaaagatcagctcgagcaaatcacccgcaaattgctctcccgtctcgaccagatggaacaagacggtgtggttctcgaagcgatgagctaacgcgtcatctcgctcaaaaatccagatttataaaagaaaaaatg > 2:1580086‑M1/1‑11 (MQ=255) gACCAGTACAAcagaaaaagatcagctcgagcaaatcacccgcaaattgctctcccgtctcgaccagatggaacaagacggtgtggttctcgaagcgatgagctaacgcgtcatctcgctcaaaaatccagatttataaaagaaaaaatg < 2:2921678‑M1/150‑140 (MQ=255) cAGTACAAcagaaaaagatcagctcgagcaaatcacccgcaaattgctctcccgtctcgaccagatggaacaagacggtgtggttctcgaagcgatgagctaacgcgtcatctcgctcaaaaatccagatttataaaagaaaaaatgact > 1:1029540‑M1/1‑8 (MQ=255) cAGTACAAcagaaaaagatcagctcgagcaaatcacccgcaaattgctctcccgtctcgaccagatggaacaagacggtgtggttctcgaagcgatgagctaacgcgtcatctcgctcaaaaatccagatttataaaagaaaaaatgact > 1:2834448‑M1/1‑8 (MQ=255) cAGTACAAcagaaaaagatcagctcgagcaaatcacccgcaaattgctctcccgtctcgaccagatggaacaagacggtgtggttctcgaagcgatgagctaacgcgtcatctcgctcaaaaatccagatttataaaagaaaaaatgact > 2:3419702‑M1/1‑8 (MQ=255) aGTACAAcagaaaaagatcagctcgagcaaatcacccgcaaattgctctcccgtctcgaccagatggaacaagacggtgtggttctcgaagcgatgagctaacgcgtcatctcgctcaaaaatccagatttataaaagaaaaaatgactg < 1:138604‑M1/150‑144 (MQ=255) acaacagaaaaagatcagctcgagcaaatcacccgcaaattgctctcccgtctcgaccagatggaacaagacggtgtggttctcgaagcgatgagctaacgcgtcatctcgctcaaaaatccagatttataaaagaaaaaatgactggcc > 1:278174‑M1/1‑4 (MQ=255) acaacagaaaaagatcagctcgagcaaatcacccgcaaattgctctcccgtctcgaccagatggaacaagacggtgtggttctcgaagcgatgagctaacgcgtcatctcgctcaaaaatccagatttataaaagaaaaaatgactggcc > 2:238026‑M1/1‑4 (MQ=255) caacagaaaaagatcagctcgagcaaatcacccgcaaattgctctcccgtctcgaccagatggaacaagacggtgtggttctcgaagcgatgagctaacgcgtcatctcgctcaaaaatccagatttataaaagaaaaaatgactggcca < 2:1657352‑M1/150‑148 (MQ=255) acagaaaaagatcagctcgagcaaatcacccgcaaattgctctcccgtctcgaccagatggaacaagacggtgtggttctcgaagcgatgagctaacgcgtcatctcgctcaaaaatccagatttataaaagaaaaaatgactggccagc > 2:1349627‑M1/1‑1 (MQ=255) | GCAACCTTCACCGCCGTGAACTGGACGCCACTGCATGACAACATGTACGAAGCTGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGATTTAACCGGTTGTAACCCTGGCTGGGGCTGCGAAGGTGCGATCAACCACCAGCTTGCCGCGTATGAACTGACCA > AP012306/2317901‑2318198 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |