| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | AP012306 | 2,318,050 | Δ3,691 bp | [proX]–[mprA] | [proX], ygaX, ygaZ, ygaH, [mprA] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | AP012306 | 2318050 | 2321740 | 3691 | 256 [0] | [1] 259 | [proX]–[mprA] | [proX],ygaX,ygaZ,ygaH,[mprA] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP012306 | = 2318049 | 0 (0.000) | 248 (0.790) | 166/290 | 0.4 | 99.8% | coding (383/993 nt) | proX | glycine betaine transporter subunit |
| ? | AP012306 | 2321741 = | 1 (0.000) | coding (437/531 nt) | mprA | DNA‑binding transcriptional regulator | |||||
Only 100 of 259 total aligned reads displayed.
GGTTGGATCGAACGTCGTGAAAGCGATAACGATCGCCGCTGCCTGCATCTGCAATTAACGGAAAAAGGTCACGAGTTTTTGCGCGAGGTTTTACCACCGCAGCATAACTGCCTGCATCAACTCTGGTCCGCGCTCAGCACAACAGAAAAAGATCAGCTCGAGCAAATCACCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAACGCGTCATCTCGCTCAAAAATCCAGATTTATAAAAGAAAAAATGACTGGCCAGCA > AP012306/2321599‑2321890 | gccccgccgtgaactggacgccactgcatgacaacatgtacgaagctgccggtggcgataagaaattttatcgtgaaggggtatttgttaacggcgcggcacagggttacctgatcgataagaaaaccgccgaccagtacaaCAGaaaaa < 2:2251182‑M2/8‑1 (MQ=255) ccccgccgtgaactggacgccactgcatgacaacatgtacgaagctgccggtggcgataagaaattttatcgtgaaggggtatttgttaacggcgcggcacagggttacctgatcgataagaaaaccgccgaccagtacaaCAGAAAAAg < 1:3291968‑M2/9‑1 (MQ=255) accgccgtgaactggacgccactgcatgacaacatgtacgaagctgccggtggcgataagaaattttatcgtgaaggggtatttgttaacggcgcggcacagggttacctgatcgataagaaaaccgccgaccagtacaaCAGAAAAAGa > 1:1429284‑M2/141‑150 (MQ=255) ccgccgtgaactggacgccactgcatgacaacatgtacgaagctgccggtggcgataagaaattttatcgtgaaggggtatttgttaacggcgcggcacagggttccctgatcgataagaaaaccgccgaccagtacaaCAGAAAAAGAt < 1:1180650‑M2/11‑1 (MQ=255) ccgccgtgaactggacgccactgcatgacaacatgtacgaagctgccggtggcgataagaaattttatcgtgaaggggtatttgttaacggcgcggcaaagggttacctgatcgataagaaaaccgccgaccagtacaaCAGAAAAAGAt < 1:3798879‑M2/11‑1 (MQ=255) cgccgtgaactggacgccactgcatgacaacatgtacgaagctgccggtggcgataagaaattttatcgtgaaggggtatttgttaacggcgcggcacagggttacctgatcgataagaaaaccgccgaccagtacaaCAGAAAAAGATc < 1:1810249‑M2/12‑1 (MQ=255) gccgtgaactggacgccactgcatgacaacatgtacgaagctgccggtggcgataagaaattttatcgtgaaggggtatttgttaacggcgcggcacagggttacctgatcgataagaaaaccgccgaccagtacaaCAGAAAAAGATCa > 1:4039118‑M2/138‑150 (MQ=255) gtaaactggacgccactgcatgacaacatgtacgaagctgccggtggcgataagaaattttatcgtgaaggggtatttgttaacggcgcggcacagggttacctgatcgataagaaaaccgccgaccagtacaaCAGAAAAAGATCAGCt < 1:2826357‑M2/16‑1 (MQ=255) aactggacgccactgcatgacaacatgtacgaagctgccggtggcgataagaaattttatcgtgaaggggtatttgttaacggcgcggcacagggttacctgatcgataagaaaaccgccgaccagtacaaCAGAAAAAGATCAGCTCGa < 1:3977094‑M2/19‑1 (MQ=255) aactggacgccactgcatgacaacatgtacgaagctgccggtggcgataagaaattttatcgtgaaggggtatttgttaacggcgcggcacagggttacctgatcgataagaaaaccgccgaccagtacaaCAGAAAAAGATCAGCTCGa > 1:2938945‑M2/132‑150 (MQ=255) actggacgccactgcatgacaacatgtacgaagctgccggtggcgataagaaattttatcgtgaaggggtatttgttaacggcgcggcacagggttacctgatcgttaagaaaaccgccgaccagtacaaCAGAAAAAGATCAGCTCGAg > 1:3531839‑M2/131‑150 (MQ=255) actggacgccactgcatgacaacatgtacgaagctgccggtggcgataagaaattttatcgtgaaggggtatttgttaacggcgcggcacagggttacctgatcgataagaaaaccgccgaccagtacaaCAGAAAAAGATCAGCTCGAg > 1:2700193‑M2/131‑150 (MQ=255) tggacgccactgcatgacaacatgtacgaagctgccggtggcgataagaaattttatcgtgaaggggtatttgttaacggcgcggcacagggttacctgatcgataagaaaaccgccgaccagtacaaCAGAAAAAGATCAGCTCGAGCa > 1:592352‑M2/129‑150 (MQ=255) ggacgccactgcatgacaacatgtacgaagctgccggtggcgataagaaattttatcgtgaaggggtatttgttaacggcgcggcacagggttacctgatcgataagaaaaccgccgaccagtacaaCAGAAAAAGATCAGCTCGAGCaa < 1:3576023‑M2/23‑1 (MQ=255) cgccactgcatgacaacatgtacgaagctgccggtggcgataagaaattttatcgtgaaggggtatttgttaacggcgcggcacagggttacctgatcgataagaaaaccgccgaccagtacaaCAGAAAAAGATCAGCTCGAGCAAATc > 1:219670‑M2/125‑150 (MQ=255) cgccactgcatgacaacatgtacgaagctgccggtggcgataagaaattttatcgtgaaggggtatttgttaacggcgcggcacagggttacctgatcgataagaaaaccgccgaccagtacaaCAGAAAAAGATCAGCTCGAGCAAATc > 1:3105681‑M2/125‑150 (MQ=255) gccactgcatgacaacatgtacgaagctgccggtggcgataagaaattttatcgtgaaggggtatttgttaacggcgcggcacagggttacctgatcgataagaaaaccgccgaccagtacaaCAGAAAAAGATCAGCTCGAGCAAATCa > 1:332085‑M2/124‑150 (MQ=255) cactgcatgacaacatgtacgaagctgccggtggcgataagaaattttatcgtgaaggggtatttgttaacggcgcggcacagggttacctgatcgataagaaaaccgccgaccagtacaaCAGAAAAAGATCAGCTCGAGCAAATCAcc < 1:505123‑M2/29‑1 (MQ=255) actgcatgacaacatgtacgaagctgccggtggcgataagaaattttatcgtgaaggggtatttgttaacggcgcggcacagggttacctgatcgataagaaaaccgccgaccagtacaaCAGAAAAAGATCAGCTCGAGCAAATCAccc < 1:451032‑M2/30‑1 (MQ=255) actgcatgacaacatgtacgaagctgccggtggcgataagaaattttatcgtgaaggggtatttgttaacggcgcggcacagggttacctgatcgataagaaaaccgccgaccagtacaaCAGAAAAAGATCAGCTCGAGCAAATCAccc > 2:3687103‑M2/121‑150 (MQ=255) ctgcatgacaacatgtacgaagctgccggtggcgataagaaattttatcgtgaaggggtatttgttaacggcgcggcacagggttacctgatcgataagaaaaccgccgaccagtacaaCAGAAAAAGATCAGCTCGAGCAAATCACCCg < 1:1712328‑M2/31‑1 (MQ=255) tgcatgacaacatgtacgaagctgccggtggcgataagaaattttatcgtgaaggggtatttgttaacggcgcggcacagggttacctgatcgataagaaaaccgccgaccagtacaaCAGAAAAAGATCAGCTCGAGCAAATCACCCGc > 1:3936533‑M2/119‑150 (MQ=255) tgcatgacaacatgtacgaagctgccggtggcgataagaaattttatcgtgaaggggtatttgttaacggcgcggcacagggttacctgatcgataagaaaaccgccgaccagtacaaCAGAAAAAGATCAGCTCGAGCAAATCACCCGc > 1:3649065‑M2/119‑150 (MQ=255) gacaacatgtacgaagctgccggtggcgataagaaattttatcgtgaaggggtatttgttaacggcgcggcacagggttacctgatcgataagaaaaccgccgaccagtacaaCAGAAAAAGATCAGCTCGAGCAAATCACCCGCAAAtt < 1:4239881‑M2/37‑1 (MQ=255) gacaacatgtacgaagctgccggtggcgataagaaattttatcgtgaaggggtatttgttaacggcgcggcacagggttacctgatcgataagaaaaccgccgaccagtacaaCAGAAAAAGATCAGCTCGAGCAAATCACCCGCAAAtt < 1:1286171‑M2/37‑1 (MQ=255) caacatgtacgaagctgccggtggcgataagaaattttatcgtgaaggggtatttgttaacggcgcggcacagggttacctgatcgataagaaaaccgccgaccagtacaaCAGAAAAAGATCAGCTCGAGCAAATCACCCGCAAATTGc < 1:1899333‑M2/39‑1 (MQ=255) caacatgtacgaagctgccggtggcgataagaaattttatcgtgaaggggtatttgttaacggcgcggcacagggttacctgatcgataagaaaaccgccgaccagtacaaCAGAAAAAGATCAGCTCGAGCAAATCACCCGCAAATTGc > 2:1383247‑M2/112‑150 (MQ=255) aacatgtacgaagctgccggtggcgataagaaattttatcgtgaaggggtatttgttaacggcgcggcacagggttacctgatcgataagaaaaccgccgaccagtacaaCAGAAAAAGATCAGCTCGAGCAAATCACCCGCAAATTGct > 2:733943‑M2/111‑150 (MQ=255) atgtacgaagctgccggtggcgataagaaattttatcgtgaaggggtatttgttaacggcgcggcacagggttacctgatcgataagaaaaccgccgaccagtacaaCAGAAAAAGATCAGCTCGAGCAAATCACCCGCAAATTGCtctc < 2:2813066‑M2/43‑1 (MQ=255) acgaagctgccggtggcgataagaaattttatcgtgaaggggtatttgttaacggcgcggcacagggttacctgatcgataagaaaaccgccgaccagtacaaCAGAAAAAGATCAGCTCGAGCAAATCACCCGCAAATTGCTCTCCCGt > 2:598076‑M2/104‑150 (MQ=255) cgaagctgccggtggcgataagaaattttatcgtgaaggggtatttgttaacggcgcggcacagggttacctgatcgataagaaaaccgccgaccagtacaaCAGAAAAAGATCAGCTCGAGCAAATCACCCGCAAATTGCTCTCCCGtc > 1:1961808‑M2/103‑150 (MQ=255) gaagctgccggtggcgataagaaattttatcgtgaaggggtatttgttaacggcgcggcacagggttacctgatcgataagaaaaccgccgaccagtacaaCAGAAAAAGATCAGCTCGAGCAAATCACCCGCAAATTGCTCTCCCGtct > 1:2610290‑M2/102‑150 (MQ=255) gaagctgccggtggcgataagaaattttatcgtgaaggggtatttgttaacggcgcggcacagggttacctgatcgataagaaaaccgccgaccagtacaaCAGAAAAAGATCAGCTCGAGCAAATCACCCGCAAATTGCTCTCCCGtct > 2:2522475‑M2/102‑150 (MQ=255) ccggtggcgataagaaattttatcgtgaaggggtatttgttaacggcgcggcacagggttacctgatcgataagaaaaccgccgaccagtacaaCAGAAAAAGATCAGCTCGAGCAAATCACCCGCAAATTGCTCTCCCGTCTCGACCAg > 1:3767677‑M2/95‑150 (MQ=255) ccggtggcgataagaaattttatcgtgaaggggtatttgttaacggcgcggcacagggttacctgatcgataagaaaaccgccgaccagtacaaCAGAAAAAGATCAGCTCGAGCAAATCACCCGCAAATTGCTCTCCCGTCTCGACCAg < 1:634413‑M2/56‑1 (MQ=255) ggtggcgataagaaattttatcgtgaaggggtatttgttaacggcgcggcacagggttacctgatcgataagaaaaccgccgaccagtacaaCAGAAAAAGATCAGCTCGAGCAAATCACCCGCAAATTGCTCTCCCGTCTCGACCAGAt < 1:3002183‑M2/58‑1 (MQ=255) gtggcgataagaaattttatcgtgaaggggtatttgttaacggcgcggcacagggttacctgatcgataagaaaaccgccgaccagtacaaCAGAAAAAGATCAGCTCGAGCAAATCACCCGCAAATTGCTCTCCCGTCTCGACCAGATg > 2:463445‑M2/92‑150 (MQ=255) tggcgataagaaattttatcgtgaaggggtatttgttaacggcgcggcacagggttacctgatcgataagaaaaccgccgaccagtacaaCAGAAAAAGATCAGCTCGAGCAAATCACCCGCAAATTGCTCTCCCGTCTCGACCAGATgg > 2:8627‑M2/91‑150 (MQ=255) ggcgataagaaattttatcgtgaaggggtatttgttaacggcgcggcacagggttacctgatcgataagaaaaccgccgaccagtacaaCAGAAAAAGATCAGCTCGAGCAAATCACCCGCAAATTGCTCTCCCGTCTCGACCAGATGGa > 1:497435‑M2/90‑150 (MQ=255) gataagaaattttatcgtgaaggggtatttgttaacggcgcggcacagggttacctgatcgataagaaaaccgccgaccagtacaaCAGAAAAAGATCAGCTCGAGCAAATCACCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACa > 1:2355459‑M2/87‑150 (MQ=255) ataagaaattttatcgtgaaggggtatttgttaacggcgcggcacagggttccctgatcgataagaaaaccgccgaccagtacaaCAGAAAAAGATCAGCTCGAGCAAATCACCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACaa < 1:2553708‑M2/65‑1 (MQ=255) taagaaattttatcgtgaaggggtatttgttaacggcgcggcacagggttacctgatcgataagaaaaccgccgaccagtacaaCAGAAAAAGATCAGCTCGAGCAAATCACCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAg < 1:3119634‑M2/66‑1 (MQ=255) aagaaattttatcgtgaaggggtatttgttaacggcgcggcacagggttacctgatcgataagaaaaccgccgaccagtacaaCAGAAAAAGATCAGCTCGAGCAAATCACCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGa > 2:672987‑M2/84‑150 (MQ=255) aagaaattttatcgtgaaggggtatttgttaacggcgcggcacagggttacctgatcgataagaaaaccgccgaccagtacaaCAGAAAAAGATCAGCTCGAGCAAATCACCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGa > 1:2431380‑M2/84‑150 (MQ=255) aagaaattttatcgtgaaggggtatttgttaacggcgcggcacagggttacctgatcgataagaaaaccgccgaccagtacaaCAGAAAAAGATCAGCTCGAGCAAATCACCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGa > 2:2164735‑M2/84‑150 (MQ=255) aagaaattttatcgtgaaggggtatttgttaacggcgcggcacagggttacctgatcgataagaaaaccgccgaccagtacaaCAGAAAAAGATCAGCTCGAGCAAATCACCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGa > 2:747975‑M2/84‑150 (MQ=255) agaaattttatcgtgaaggggtatttgttaacggcgcggcacagggttacctgatcgataagaaaaccgccgaccagtacaaCAGAAAAAGATCAGCTCGAGCAAATCACCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGAc > 2:259874‑M2/83‑150 (MQ=255) gaaattttatcgtgaaggggtatttgttaacggcgcggcacagggttacctgatcgataagaaaaccgccgaccagtacaaCAGAAAAAGATCAGCTCGAGCAAATCACCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACg > 2:1113984‑M2/82‑150 (MQ=255) aattttatcgtgaaggggtatttgttaacggcgcggcacagggttacctgatcgataagaaaaccgccgaccagtacaaCAGAAAAAGATCAGCTCGAGCAAATCACCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGgt > 2:2093564‑M2/80‑150 (MQ=255) aaGGTCACGAGTTTTTGCGCGAGGTTTTACCACCGCAGCATAACTGCCTGCATCAACTCTGGTCCGCGCTCAGCACAACAGAAAAAGATCAGCTCGAGCAAATCACCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGgtg > 2:4217370/1‑150 (MQ=255) ttttatcgtgaaggggtatttgttaacggcgcggcacagggttacctgatcgataagaaaaccgccgaccagtacaaCAGAAAAAGATCAGCTCGAGCAAATCACCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGgtgt > 1:803305‑M2/78‑150 (MQ=255) tttatcgtgaaggggtatttgttaacggcgcggcacagggttacctgatcgataagaaaaccgccgaccagtacaaCAGAAAAAGATCAGCTCGAGCAAATCACCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGtgtg > 2:4008228‑M2/77‑150 (MQ=255) tcgtgaaggggtatttgttaacggcgcggcacagggttacctgatcgataagaaaaccgccgaccagtacaaCAGAAAAAGATCAGCTCGAGCAAATCACCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTtc < 1:3145990‑M2/78‑1 (MQ=255) gtgaaggggtatttgttaacggcgcggcacagggttacctgatcgataagaaaaccgccgaccagtacaaCAGAAAAAGATCAGCTCGAGCAAATCACCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTtctc > 1:120072‑M2/71‑150 (MQ=255) gaaggggtatttgttaacggcgcggcacagggttacctgatcgataagaaaaccgccgaccagtacaaCAGAAAAAGATCAGCTCGAGCAAATCACCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGa > 2:428722‑M2/69‑150 (MQ=255) gaaggggtatttgttaacggcgcggcacagggttacctgatcgataagaaaaccgccgaccagtacaaCAGAAAAAGATCAGCTCGAGCAAATCACCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGa > 2:2331433‑M2/69‑150 (MQ=255) aggggtatttgttaacggcgcggcccagggttacctgatcgataagaaaaccgccgaccagtacaaCAGAAAAAGATCAGCTCGAGCAAATCCCCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAg < 1:1084449‑M2/84‑1 (MQ=255) gggtatttgttaacggcgcggcacagggttacctgatcgataagaaaaccgccgaccagtacaaCAGAAAAAGATCAGCTCGAGCAAATCACCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCg > 1:1747547‑M2/65‑150 (MQ=255) ggtatttgttaacggcgcggcacagggttacctgatcgataagaaaaccgccgaccagtacaaCAGAAAAAGATCAGCTCGAGCAAATCACCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGa > 1:1409954‑M2/64‑150 (MQ=255) gtatttgttaacggcgcggcacagggttacctgatcgataagaaaaccgccgaccagtacaaCAGAAAAAGATCAGCTCGAGCAAATCACCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGAt > 2:540218‑M2/63‑150 (MQ=255) atttgttaacggcgcggcacagggttacctgatcgataagaaaaccgccgaccagtacaaCAGAAAAAGATCAGCTCGAGCAAATCACCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGa > 2:1025989‑M2/61‑150 (MQ=255) taacggcgcggcacagggttacctgatcgataagaaaaccgccgaccagtacaaCAGAAAAAGATCAGCTCGAGCAAATCACCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAc < 1:878806‑M2/96‑1 (MQ=255) aacggcgcggcacagggttacctgatcgataagaaaaccgccgaccagtacaaCAGAAAAAGATCAGCTCGAGCAAATCACCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAcg > 1:2686126‑M2/54‑150 (MQ=255) cggcgcggcacagggttacctgatcgataagaaaaccgccgaccagtacaaCAGAAAAAGATCAGCTCGAGCAAATCACCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAcgcg < 1:1062866‑M2/99‑1 (MQ=255) ggcgcggcacagggttacctgatcgataagaaaaccgccgaccagtacaaCAGAAAAAGATCAGCTCGAGCAAATCACCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAACGCGt > 1:2591227‑M2/51‑150 (MQ=255) ggcgcggcacagggttacctgatcgataagaaaaccgccgaccagtacaaCAGAAAAAGATCAGCTCGAGCAAATCACCCGCAAATTGCTCTCCCGTCTCGAACAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAACGCGt < 1:2247124‑M2/100‑1 (MQ=255) ggcacagggttacctgatcgataagaaaaccgccgaccagtacaaCAGAAAAAGATCAGCTCGAGCAAATCACCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAACGCGTCAtct > 1:1659571‑M2/46‑150 (MQ=255) cagggttacctgatcgataagaaaaccgccgaccagtacaaCAGAAAAAGATCAGCTCGAGCAAATCACCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAACGCGTCATCTCGCt > 1:599220‑M2/42‑150 (MQ=255) agggttacctgatcgataagaaaaccgccgaccagtacaaCAGAAAAAGATCAGCTCGAGCAAATCACCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAACGCGTCATCTCGCTc > 2:3830848‑M2/41‑150 (MQ=255) ggttacctgatcgataagaaaaccgccgaccagtacaaCAGAAAAAGATCAGCTCGAGCAAATCACCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAACGCGTCATCTCGCTCaa > 1:1553465‑M2/39‑150 (MQ=255) ttacctgatcgataagaaaaccgccgaccagtacaaCAGAAAAAGATCAGCTCGAGCAAATCACCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAACGCGTCATCTCGCTCaaaa < 1:319837‑M2/114‑1 (MQ=255) tacctgatcgataagaaaaccgccgaccagtacaaCAGAAAAAGATCAGCTCGAGCAAATCACCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAACGCGTCATCTCGCTCaaaaa < 1:3463760‑M2/115‑1 (MQ=255) acctgatcgataagaaaaccgccgaccagtacaaCAGAAAAAGATCAGCTCGAGCAAATCACCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAACGCGTCATCTCGCTCAAAAAt > 2:4119993‑M2/35‑150 (MQ=255) tgatcgataagaaaaccgccgaccagtacaaCAGAAAAAGATCAGCTCGAGCAAATCACCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAACGCGTCATCTCGCTCAAAAATCCa < 1:2821046‑M2/119‑1 (MQ=255) gatcgataagaaaaccgccgaccagtacaaCAGAAAAAGATCAGCTCGAGCAAATCACCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAACGCGTCATCTCGCTCAAAAATCCAg > 1:3718131‑M2/31‑150 (MQ=255) atcgataagaaaaccgccgaccagtacaaCAGAAAAAGATCAGCTCGAGCAAATCACCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAACGCGTCATCTCGCTCAAAAATCCAGa < 2:1815151‑M2/121‑1 (MQ=255) atcgataagaaaaacgccgaccagtacaaCAGAAAAAGATCAGCTCGAGCAAATCACCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAACGCGTCATCTCGCTCAAAAATCCAGa > 2:3015883‑M2/30‑150 (MQ=255) tcgataagaaaaccgccgaccagtacaaCAGAAAAAGATCAGCTCGAGCAAATCACCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAACGCGTCATCTCGCTCAAAAATCCAGAt > 2:3533961‑M2/29‑150 (MQ=255) tcgataagaaaaccgccgaccagtacaaCAGAAAAAGATCAGCTCGAGCAAATCACCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAACGCGTCATCTCGCTCAAAAATCCAGAt > 2:3208306‑M2/29‑150 (MQ=255) gataagaaaaccgccgaccagtacaaCAGAAAAAGATCAGCTCGAGCAAATCACCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAACGCGTCATCTCGCTCAAAAATCCAGAttt > 1:1592033‑M2/27‑150 (MQ=255) atatgaaaaccgccgaccagtacaaCAGAAAAAGATCAGCTCGAGCAAATCACCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAACGCGTCATCTCGCTCAAAAATCCAGATTta < 1:3433276‑M2/125‑1 (MQ=255) aagaaaaccgccgaccagtacaaCAGAAAAAGATCAGCTCGAGCAAATCACCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAACGCGTCATCTCGCTCAAAAATCCAGATTtata < 2:436742‑M2/127‑1 (MQ=255) aagaaaaccgccgaccagtacaaCAGAAAAAGATCAGCTCGAGCAAATCACCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAACGCGTCATCTCGCTCAAAAATCCAGATTtata < 1:1849926‑M2/127‑1 (MQ=255) aaagccgccgaccagtacaaCAGAAAAAGATCAGCTCGAGCAAATCACCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAACGCGTCATCTCGCTCAAAAATCCAGATTTATaaaa < 1:3886821‑M2/130‑1 (MQ=255) aaccgccgaccagtacaaCAGAAAAAGATCAGCTCGAGCAAATCACCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAACGCGTCATCTCGCTCAAAAATCCAGATTTATAAAAGa < 1:2174992‑M2/132‑1 (MQ=255) cgccgaccagtacaaCAGAAAAAGATCAGCTCGAGCAAATCACCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGAGTGGATCTCGAAGCGATGAGCTAACGCGTCATCTCGCTCAAAAATCCAGATTTATAAAAGaaaa > 1:1055387‑M2/16‑150 (MQ=255) gccgaccagtacaaCAGAAAAAGATCAGCTCGAGCAAATCACCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAACGCGTCATCTCGCTCAAAAATCCAGATTTATAAAAGaaaaa > 1:2853284‑M2/15‑150 (MQ=255) ccgaccagtacaaCAGAAAAAGATCAGCTCGAGCAAATCACCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAACGCGTCATCTCGCTCAAAAATCCAGATTTATAAAAGaaaaaa > 1:2073661‑M2/14‑150 (MQ=255) ccgaccagtacaaCAGAAAAAGATCAGCTCGAGCAAATCACCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGCTCTCGAAGCGATGAGCTAACGCGTCATCTCGCTCAAAAATCCAGATTTATAAAAGaaaaaa > 2:1947735‑M2/14‑150 (MQ=255) gaccagtacaaCAGAAAAAGATCAGCTCGAGCAAATCACCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAACGCGTCATCTCGCTCAAAAATCCAGATTTATAAAAGAAAAAATg < 2:2921678‑M2/139‑1 (MQ=255) gaccagtacaaCAGAAAAAGATCAGCTCGAGCAAATCACCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAACGCGTCATCTCGCTCAAAAATCCAGATTTATAAAAGAAAAAATg > 2:1580086‑M2/12‑150 (MQ=255) cagtacaaCAGAAAAAGATCAGCTCGAGCAAATCACCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAACGCGTCATCTCGCTCAAAAATCCAGATTTATAAAAGAAAAAATGACt > 2:3419702‑M2/9‑150 (MQ=255) cagtacaaCAGAAAAAGATCAGCTCGAGCAAATCACCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAACGCGTCATCTCGCTCAAAAATCCAGATTTATAAAAGAAAAAATGACt > 1:1029540‑M2/9‑150 (MQ=255) cagtacaaCAGAAAAAGATCAGCTCGAGCAAATCACCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAACGCGTCATCTCGCTCAAAAATCCAGATTTATAAAAGAAAAAATGACt > 1:2834448‑M2/9‑150 (MQ=255) gtacaaCAGAAAAAGATCAGCTCGAGCAAATCACCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAACGCGTCATCTCGCTCAAAAATCCAGATTTATAAAAGAAAAAATGACTgg > 2:2148754‑M2/7‑150 (MQ=255) acaaCAGAAAAAGATCAGCTCGAGCAAATCACCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAACGCGTCATCTCGCTCAAAAATCCAGATTTATAAAAGAAAAAATGACTGGcc > 2:238026‑M2/5‑150 (MQ=255) acaaCAGAAAAAGATCAGCTCGAGCAAATCACCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAACGCGTCATCTCGCTCAAAAATCCAGATTTATAAAAGAAAAAATGACTGGcc > 1:278174‑M2/5‑150 (MQ=255) caaCAGAAAAAGATCAGCTCGAGCAAATCACCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAACGCGTCATCTCGCTCAAAAATCCAGATTTATAAAAGAAAAAATGACTGGCCa < 2:1657352‑M2/147‑1 (MQ=255) aCAGAAAAAGATCAGCTCGAGCAAATCACCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAACGCGTCATCTCGCTCAAAAATCCAGATTTATAAAAGAAAAAATGACTGGCCAGc > 2:1349627‑M2/2‑150 (MQ=255) caGAAAAAGATCAGCTCGAGCAAATCACCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAACGCGTCATCTCGCTCAAAAATCCAGATTTATAAAAGAAAAAATGACTGGCCAGCa > 1:750213/1‑150 (MQ=255) | GGTTGGATCGAACGTCGTGAAAGCGATAACGATCGCCGCTGCCTGCATCTGCAATTAACGGAAAAAGGTCACGAGTTTTTGCGCGAGGTTTTACCACCGCAGCATAACTGCCTGCATCAACTCTGGTCCGCGCTCAGCACAACAGAAAAAGATCAGCTCGAGCAAATCACCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAACGCGTCATCTCGCTCAAAAATCCAGATTTATAAAAGAAAAAATGACTGGCCAGCA > AP012306/2321599‑2321890 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |