| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_012967 | = 3894996 | NA (NA) | 199 (0.900) | 97/142 | 0.4 | 100% | intergenic (+26/‑162) | ECB_RS25215/rbsD | IS3‑like element IS150 family transposase/D‑ribose pyranase |
| ? | NC_012967 | 3895392 = | 0 (0.000) | coding (235/420 nt) | rbsD | D‑ribose pyranase | |||||
Only 100 of 199 total aligned reads displayed.
ACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_012967/3894926‑3894996‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAACTCCACGAAACGTTGCTCACTCACCTTGAGCAGCTGCAAAAACACCAGGGAAATACCATTGAAATTCG > NC_012967/3895392‑3895462 TCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAA > 1:6044948/1‑72 CAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACT < 1:6910977/72‑1 CAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACT > 1:5041834/1‑72 CAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACT > 2:4784337/1‑72 CAACTGAATATCGCAATCATACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACT < 2:4742697/72‑1 ATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACTCC < 1:6940931/72‑1 TTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACTCCA > 2:2515686/1‑72 TGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACTCCAC > 2:4398100/1‑72 AATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACTCCACGA > 1:5764174/1‑72 ATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACTCCACGAA < 2:4337915/72‑1 ATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACTCCACGAA > 1:5145454/1‑72 ATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACTCCACGAA > 2:2428462/1‑72 ATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGCGTCAGTACACAACTCCACGAAAC > 1:1912730/1‑72 TCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACTCCACGAAACG > 1:6165716/1‑72 TCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACTCCACGAAACG < 1:3386927/72‑1 TCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACTCCACGAAACG > 1:3603838/1‑72 CGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACTCCACGAAACGT < 1:7354402/72‑1 GGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACTCCACGAAACGTT > 1:5578527/1‑72 GGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACTCCACGAAACGTT > 1:7503434/1‑72 GGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACTCCACGAAACGTT < 2:926417/72‑1 AATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACTCCACGAAACGTTGC < 1:6761436/72‑1 AATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACTCCACGAAACGTTGC > 2:4913755/1‑72 ATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACTCCACGAAACGTTGCT < 1:6233817/72‑1 TCAGACCTATATGCCTCGTGTTTAACTGTGCAACTTTTTGGGGTCAGTACACAACTCCACGAAACGTTGNTC > 2:627395/1‑72 TCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACTCCACGAAACGTTGCTC < 2:3614970/72‑1 AGACCTATATGNCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACTCCACGAAACGTTGCTCNC > 1:746794/1‑72 GACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACTCCACGAAACGTTGCTCACT > 2:1582688/1‑72 GACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACTCCACGAAACGTTGCTCACT < 1:6322542/72‑1 CCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACTCCACGAAACGTTGCTCACTCA > 1:6767684/1‑72 CTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACTCCACGAAACGTTGCTCACTCAC > 1:3889578/1‑72 TATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACTCCACGAAACGTTGCTCACTCACC > 1:181327/1‑72 TATATGCCTCGTGTTTAACTGTCAAACTTTTTGGGGTCAGTACACAACTCCACGAAACGTTGCTCACTCACC < 1:3575604/72‑1 TATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACTCCACGAAACGTTGCTCACTCACCTT > 1:6653922/1‑72 ATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACTCCACGAAACGTTGCTCACTCACCTTG < 2:3868030/72‑1 TGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACTCCACGAAACGTTGCTCACTCACCTTGA > 2:3431247/1‑72 TGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACTCCACGAAACGTTGCTCACTCACCTTGA > 2:3147411/1‑72 TGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACTCCACGAAACGTTGCTCACTCACCTTGA < 1:4041982/72‑1 GCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACTCCACGAAACGTTGCTCACTCACCTTGAG < 1:7224629/72‑1 GCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACTCCACGAAACGTTGCTCACTCACCTTGAG < 2:5439187/72‑1 GCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACTCCACGAAACGTTGCTCACTCACCTTGAG > 2:5633809/1‑72 CCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACTCCACGAAACGTTGCTCACTCACCTTGAGC > 1:5743141/1‑72 TCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACTCCACGAAACGTTGCTCACTCACCTTGAGCAG > 2:2286398/1‑72 TCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACTCCACGAAACGTTGCTCAATCACCTTGAGCAG > 2:5263043/1‑72 CGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACTCCACGAAACGTTGCTCACTCACCTTGAGCAGC < 1:6100853/72‑1 CGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACTCCACGAAACGTTGCTCACTCACCTTGAGCAGC < 1:5556823/72‑1 CGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACTCCACGAAACGTTGCTCACTCACCTTGAGCAGC < 1:2531321/72‑1 CGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACTCCACGAAACGTTGCTCACTCACCTTGAGCAGC > 2:423976/1‑72 GTGTTTAACTGTCCAACTTTTTTGGGTCAGTACACAACTCCACGAAACGTTGCTCACTCACCTTGAGCAGCT < 2:6068779/72‑1 GTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACTCCACGAAACGTTGCTCACTCACCTTGAGCAGCT > 1:688450/1‑72 GTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACTCCACGAAACGTTGCTCACTCACCTTGAGCAGCT < 2:755041/72‑1 GTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACTCCACGAAACGTTGCTCACTCACCTTGAGCAGCT > 2:1891792/1‑72 GTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACTCCACGAAACGTTGCTCACTCACCTTGAGCAGCT > 1:1386328/1‑72 GTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACTCCACGAAACGTTGCTCACTCACCTTGAGCAGCT < 1:4693359/72‑1 GTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACTCCACGAAACGTTGCTCACTCACCTTGAGCAGCT > 1:212909/1‑72 TGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACTCCACGAAACGTTGCTCACTCACCTTGAGCAGCTG < 2:4003131/72‑1 TGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACTCCACGAAACGTTGCTCACTCACCTTGAGCAGCTG > 1:487181/1‑72 TGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACTCCACGAAACGTTGCTCACTCACCTTGAGCAGCTG < 2:1045839/72‑1 GTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACTCCACGAAACGTTGCTCACTCACCTTGAGCAGCTGC > 2:2141579/1‑72 GTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACTCCACGAAACGTTGCTCACTCACCTTGAGCAGCTGC < 2:5912402/72‑1 TTTAACTGTCCAACTTTTTGGGGTCAGTACACAACTCCACGAAACGTTGCTCACTCACCTTGAGCAGCTGCA > 1:5679475/1‑72 TTTAACTGTCCAACTTTTTGGGGTCAGTACACAACTCCACGAAACGTTGCTCACTCACCTTGAGCAGCTGCA < 1:4287682/72‑1 TTAACTGTCCAACTTTTTGGGGTCAGTACACAACTCCACGAAACGTTGCTCACTCACCTTGAGCAGCTGCAA > 1:2009024/1‑72 TTAACTGTCCAACTTTTTGGGGTCAGTACACAACTCCACGAAACGTTGCTCACTCACCTTGAGCAGCTGCAA > 2:132804/1‑72 TAACTGTCCAACTTTTTGGGGTCAGTACACAACTCCACGAAACGTTGCTCACTCACCTTGAGCAGCTGCAAA > 2:694523/1‑72 TAACTGTCCAACTTTTTGGGGTCAGTACACAACTCCACGAAACGTTGCTCACTCACCTTGAGCAGCTGCAAA > 1:6524974/1‑72 ACTGTCCAACTTTTTGGGGTCAGTACACAACTCCACGAAACGTTGCTCACTCACCTTGAGCAGCTGCAAAAA > 2:199213/1‑72 ACTGTCCAACTTTTTGGGGTCAGTACACAACTCCACGAAACGTTGCTCACTCACCTTGAGCAGCTGCAAAAA < 2:3726815/72‑1 TGTCCAACTTTTTGGGGTCAGTACACAACTCCACGAAACGTTGCTCACTCACCTTGAGCAGCTGCAAAAACA < 1:3839305/72‑1 GTCCAACTTTTTGGGGTCAGTACACAACTCCACGAAACGTTGCTCACTCACCTTGAGCAGCTGCAAAAACAC > 2:6185156/1‑72 TCCAACTTTTTGGGGTCAGTACACAACTCCACGAAACGTTGCTCACTCACCTTGAGCAGCTGCAAAAACACC > 1:4457319/1‑72 CCAACTTTTTGGGGTCAGTACACAACTCCACGAAACGTTGCTCACTCACCTTGAGCAGCTGCAAAAACACCA < 2:6990356/72‑1 CCAACTTTTTGGGGTCAGTACACAACTCCACGAAACGTTGCTCACTCACCTTGAGCAGCTGCAAAAACACCA < 1:4338732/72‑1 CAACTTTTTGGGGTCAGTACACAACTCCACGAAACGTTGCTCACTCACCTTGAGCAGCTGCAAACACACCAG > 2:1542931/1‑72 CAACTTTTTGGGGTCAGTACACAACTCCACGAAACGTTGCTCACTCACCTTGAGCAGCTGCAAAAACACCAG > 2:360200/1‑72 AACTTTTTGGGGTCAGTACACAACTCCACGAAACGTTGCTCACTCACCTTGAGCAGCTGCAAAAACACCAGG < 1:1223284/72‑1 AACTTTTTGGGGTCAGTACACAACTCCACGAAACGTTGCTCACTCACCTTGAGCAGCTGCAAAAACACCAGG < 2:6748640/72‑1 AACTTTTTGGGGTCAGTACACAACTCCACGAAACGTTGCTCACTCACCTTGAGCAGCTGCAAAAACACCAGG < 2:4614989/72‑1 AACTTTTTGGGGTCAGTACACAACTCCACGAAACGTTGCTCACTCACCTTGAGCAGCTGCAAAAACACCAGG < 1:2658129/72‑1 ACTTTTTGGGGTCCGTACCAAAACCCACGAAACGTTGCTCACTCCCCCTGAGCAGCTGCAAAAACACCAGGG < 1:6691995/72‑1 ACTTTTTGGGGTCAGTACACAACTCCACGAAACGTTGCTCACTCACCTTGAGCAGCTGCAAAAACACCAGGG > 1:218832/1‑72 TTTTTGGGGTCAGTACACAACTCCACGAAACGTTGCTCACTCACCTTGAGCAGCTTCAAAAACACCAGGGAA < 2:3043753/72‑1 TTTTTGGGGTCAGTACACAACTCCACGAAACGTTGCTCACTCACCTTGAGCAGCTGCAAAAACACCAGGGAA < 1:7012865/72‑1 TTTTTGGGGTCAGTACACAACTCCACGAAACGTTGCTCACTCACCTTGAGCAGCTGCAAAAACACCAGGGAA < 1:3265803/72‑1 TTTTGGGGTCAGTACACAACTCCACGAAACGTTGCTCACTCACCTTTAGCAGCNGCAAAAACACCAGGGAAA > 1:2566525/1‑72 TTTGGGGTCAGTACACAACTCCACGAAACGTTGCTCACTCACCTTGAGCAGCTGCAAAAACACCAGGGAAAT < 2:2801113/72‑1 TGGGGTCAGTACACAACTCCACGAAACGTTGCTCACTCACCTTGAGCAGCTGCAAAAACACCAGGGAAATAC < 1:6387647/72‑1 GGGGTCAGTACACAACTCCACGAAACGTTGCTCACTCACCTTGAGCAGCTGCAAAAACACCAGGGAAATACC < 1:5309690/72‑1 GGGGTCAGTACACAACTCCACGAAACGTTGCTCACTCACCTTGAGCAGCTGCAAAAACACCAGGGAAATACC > 2:7151501/1‑72 GGGGTCAGTACACAACTCCACGAAACGTTGCTCACTCACCTTGAGCAGCTGCAAAAACACCAGGGAAATACC > 1:6571106/1‑72 GGGTCAGTACACAACTCCACGAAACGTTGCTCACTCACCTTGAGCAGCTGCAAAAACACCAGGGAAATACCA > 1:6437071/1‑72 GGTCAGTACACAACTCCACGAAACGTTGCTCACTCACCTTGAGCAGCTGCAAAAACACCAGGGAAATACCAT > 1:4788193/1‑72 GTCAGTACACAACTCCACGAAACGTTGCTCACTCACCTTGAGCAGCTGCAAAAACACCAGGGAAATACCATT > 1:4507227/1‑72 GTCAGTACACAACTCCACGAAACGTTGCTCACTCACCTTGAGCAGCTGCAAAAACACCAGGGAAATACCATT < 2:2133428/72‑1 TCAGTACACAACTCCACGAAACGTTGCTCACTCACCTTGAGCAGCTGCAAAAACACCAGGGAAATACCATTG < 1:2413621/72‑1 TCAGTACACAACTCCACGAAACGTTGCTCACTCACCTTGAGCAGCTGCAAAAACACCAGGGAAATACCATTG < 2:6883118/72‑1 CAGTACACAACTCCACGAAACGTTGCTCACTCACCTTGAGCAGCTGCAAAAACACCAGGGAAATACCATTGA > 1:1490655/1‑72 AGTACACAACTCCACGAAACGTTGCTCACTCACCTTGAGCAGCTGCAAAAACACCAGGGAAATACCATTGAA > 1:1170574/1‑72 ACACAACTCCACGAAACGTTGCTCACTCACCTTGAGCAGCTGCAAAAACACCAGGGAAATACCATTGAAATT > 1:5969413/1‑72 ACACAACTCCACGAAACGTTGCTCACTCACCTTGAGCAGCTGCAAAAACACCAGGGAAATACCATTGAAATT < 2:4491783/72‑1 ACAACTCCACGAAACGTTGCTCACTCACCTTGAGCAGCTGCAAAAACACCAGGGAAATACCATTGAAATTCG > 1:5851808/1‑72 ACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_012967/3894926‑3894996‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAACTCCACGAAACGTTGCTCACTCACCTTGAGCAGCTGCAAAAACACCAGGGAAATACCATTGAAATTCG > NC_012967/3895392‑3895462 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |