| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_012967 | = 2278812 | 191 (0.880) | 3 (0.020) | 3/128 | 20.8 | 1.6% | coding (2201/4515 nt) | ECB_RS11350 | alpha‑2‑macroglobulin |
| ? | NC_012967 | = 2278856 | 205 (1.050) | coding (2157/4515 nt) | ECB_RS11350 | alpha‑2‑macroglobulin | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 192 total aligned reads displayed.
ACCTTTCAGCGACGAGGTTAATTCGACATTGACCAGTTCACCAGGCTGGT‑A‑ATGGGTTTTGTCCGTTTTCACCCGGATATCAAGCTGAGGAACGGCAACTTTGATCCCGGCGTTCTGAAAACTGTACTGACCATTACGGGTA > NC_012967/2278742‑2278883 | aCCTTTCAGCGACGAGGTTAATTCGACATTGACCAGTTCACCAGGCTGNT‑A‑ATGGGTTTTGTCCGTTTTCAc < 1:4812130/72‑1 (MQ=255) ccTTTCAGCGACGAGGTTAATTCGACATTGACCAGTTCACCAGGCTGGT‑A‑ATGGGTTTTGTCCGTTTTCAcc < 2:3406231/72‑1 (MQ=255) ccTTTCAGCGACGAGGTTAATTCGACATTGACCAGTTCACCAGGCTGGT‑A‑ATGGGTTTTGTCCGTTTTCAcc < 2:4932894/72‑1 (MQ=255) ccTTTCAGCGACGAGGTTAATTCGACATTGACCAGTTCACCAGGCTGGT‑A‑ATGGGTTTTGTCCGTTTTCAcc < 1:3602142/72‑1 (MQ=255) tttCAGCGACGAGGTTAATTCCACATTGACCAGTTCACCAGGCTGGT‑A‑ATGGGTTTTGTCCGTTTTCACCCg < 2:455129/72‑1 (MQ=255) ttCAGCGACGAGGTTAATTCGACATTGACCAGTTCACCAGGCTGGT‑A‑ATGGGTTTTGTCCGTTTTCACCCgg > 1:2081871/1‑72 (MQ=255) tCAGCGACGAGTTTAATTCGACATTGACCAGTTCACCAGGCTGGT‑A‑ATGGGTTTTGTCCGTTTTCACCCGGa > 1:4139041/1‑72 (MQ=255) cAGCGACGAGGTTAATTCGACATTGACCAGTTCACCAGGCTGGT‑ANAGGGGTTTTTTCGGTTTTACNCCggg > 2:840619/1‑71 (MQ=255) cAGCGACGAGGTTAATTCGACATTGACCAGTTCACCAGGCTGGT‑A‑ATGGGTTTTGTCCGTTTTCACCCGGat > 1:5379206/1‑72 (MQ=255) aGCGACGAGGTNAATTCGACATTGACCAGTTCACCAGGCTGGTAA‑AGGGGTTTTTTCGGTTTTTCCCCggng > 1:733196/1‑70 (MQ=255) gCGACGAGGTTAATTCGACATTGACCAGTTCACCAGGCTGGT‑A‑ATGGGTTTTGTCCGTTTTCACCCGGatat < 2:2634601/72‑1 (MQ=255) cgacgaGGTTAATTCGACATTGACCAGTTCACCAGGCTGGT‑A‑ATGGGTTTTGTCCGTTTTCACCCGGATATc > 2:5376572/1‑72 (MQ=255) cgacgaGGTTAATTCGACATTGACCAGTTCACCAGGCTGGT‑A‑ATGGGTTTTGTCCGTTTTCACCCGGATATc < 1:708551/72‑1 (MQ=255) gacgaGGTTAATTCGACATTGACCAGTTCACCAGGCTGGT‑A‑ATGGGTTTTGTCCGTTTTCACCCGGATATCa > 2:5883755/1‑72 (MQ=255) gacgaGGTTAATTCGACATTGACCAGTTCACCAGGCTGGT‑A‑ATGGGTTTTGTCCGTTTTCACCCGGATATCa > 1:6460968/1‑72 (MQ=255) gacgaGGTTAATTCGACATTGACCAGTTCACCAGGCTGGT‑A‑ATGGGTTTTGTCCGTTTTCACCCGGATATCa < 2:3944910/72‑1 (MQ=255) acgaGGTTAATTCGACATTGACCAGTTCACCAGGCTGGT‑A‑ATGGGTTTTGTCCGTTTTCACCCGGATATCaa < 1:3065160/72‑1 (MQ=255) acgaGGTTAATTCGACATTGACCAGTTCACCAGGCTGGT‑A‑ATGGGTTTTGTCCGTTTTCACCCGGATATCaa < 2:7311843/72‑1 (MQ=255) cgaGGTTAATTCGACATTGACCAGTTCACCAGGCTGGT‑A‑ATGGGTTTTGTCCGTTTTCACCCGGATATCAAg > 2:5976661/1‑72 (MQ=255) cgaGGTTAATTCGACATTGACCAGTTCACCAGGCTGGT‑A‑ATGGGGTTTGTCCGTTTTCACCCGGGTATCAAg > 2:111031/1‑72 (MQ=255) gaGGTTAATTCGACATTGACCAGTTCACCAGGCTGGT‑A‑ATGGGTTTTGTCCGTTTTCACCCGGATATCAAGc < 1:314056/72‑1 (MQ=255) gaGGTTAATTCGACATTGACCAGTTCACCAGGCTGGT‑A‑ATGGGTTTTGTCCGTTTTCACCCGGATATCAAGc < 1:7176377/72‑1 (MQ=255) gaGGTTAATTCGACATTGACCAGTTCACCAGGCTGGT‑A‑ATGGGTTTTGTCCGTTTTCACCCGGATATCAAGc > 2:6962639/1‑72 (MQ=255) gaGGTTAATTCGACATTGACCAGTTCACCAGGCTGGT‑A‑ATGGGTTTTGTCCGTTTTCACCCGGATATCAAGc < 1:2573867/72‑1 (MQ=255) gaGGTTAATTCGACATTGACCAGTTCACCAGGCTGGT‑A‑ATGGGTTTTGTCCGTTTTCACCCGGATATCAAGc > 2:1937726/1‑72 (MQ=255) gaGGTTAATTCGACATTGACCAGTTCACCAGGCTGGT‑A‑ATGGGTTTTGTCCGTTTTCACCCGGATATCAAGc > 2:5137247/1‑72 (MQ=255) ggTTAATTCGACATTGACCAGTTCACCAGGCTGGT‑A‑ATGGGTTTTGTCCGTTTTCACCCGGATATCAAGCTg < 2:6587646/72‑1 (MQ=255) gTTAATTCGACATTGACCAGTTCACCAGGCTGGT‑A‑ATGGGTTTTGTCCGTTTTCACCCGGATATCAAGCTGa > 2:4964378/1‑72 (MQ=255) ttAATTCGACATTGACCAGTTCACCAGGCTGGT‑A‑ATGGGTTTTGTCCGTTTTCACCCGGATATCAAGCTGAg < 1:134249/72‑1 (MQ=255) ttAATTCGACATTGACCAGTTCACCAGGCTGGT‑A‑ATGGGTTTTGTCCGTTTTCACCCGGATATCAAGCTGAg < 2:277472/72‑1 (MQ=255) aaTTCGACATTGACCAGTTCACCAGGCTGGT‑A‑ATGGGTTTTGTCCGTTTTCACCCGGATATCAAGCTGAGGa < 2:3135771/72‑1 (MQ=255) aTTCGACATTGACCAGTTCACCAGGCTGGT‑A‑ATGGGTTTTGTCCGTTTTCACCCGGATATCAAGCTGAGGaa < 1:4717362/72‑1 (MQ=255) aTTCGACATTGACCAGTTCACCAGGCTGGT‑A‑ATGGGTTTTGTCCGTTTTCACCCGGATATCAAGCTGAGGaa > 2:3507651/1‑72 (MQ=255) aTTCGACATTGACCAGTTCACCAGGCTGGT‑A‑ATGGGTTTTGTCCGTTTTCACCCGGATATCAAGCTGAGGaa < 1:972418/72‑1 (MQ=255) ttCGACATTGACCAGTTCACCAGGCTGGT‑A‑ATGGGTTTTGTCCGTTTTCACCCGGATATCAAGCTGAGGAAc < 1:5891743/72‑1 (MQ=255) tCGACATTGACCAGTTCACCAGGCTGGT‑A‑ATGGGTTTTGTCCGTTTTCACCCGGATATCAAGCTGAGGAACg > 1:3523227/1‑72 (MQ=255) aCATTNACCAGTTCACCAGGCTGGT‑A‑ATGGGTTTTGTCCGTTTTCACCCGGATATCAAGCTGAGGAACGGCa < 2:2874983/72‑1 (MQ=255) aTTGACCAGTTCACCAGGCTGGT‑A‑ATGGGTTTTGTCCGTTTTCACCCGGATATCAAGCTGAGGAACGGCAAc < 1:3783903/72‑1 (MQ=255) aTTGACCAGTTCACCAGGCTGGT‑A‑ATGGGTTTTGTCCGTTTTCACCCGGATATCAAGCTGAGGAACGGCAAc > 2:6892699/1‑72 (MQ=255) ttGACCAGTTCACCAGGCTGGT‑A‑ATGGGTTTTGTCCGTTTTCACCCGGATATCAAGCTGAGGAACGGCAACt < 1:5264770/72‑1 (MQ=255) ttGACCAGTTCACCAGGCTGGT‑A‑ATGGGTTTTGTCCGTTTTCACCCGGATATCAAGCTGAGGAACGGCAACt < 1:6020610/72‑1 (MQ=255) ttGACCAGTTCACCAGGCTGGT‑A‑ATGGGTTTTGTCCGTTTTCACCCGGATATCAAGATGAGGAACGGCAACt > 2:2990143/1‑72 (MQ=255) tagACCAGTTCACCAGGCTGGT‑A‑ATGGGTTTTTTTCGTTTTTACCCCGGTATTAAGCTGAGGGACGGCGACt > 1:688026/3‑72 (MQ=255) tGACCAGTTCACCAGGCTGGT‑A‑ATGGGTTTTGTCCGTTTTCACCCGGATATCAAGCTGAGGAACGGCAACtt < 1:520533/72‑1 (MQ=255) tGACCAGTTCACCAGGCTGGT‑A‑ATGGGTTTTGTCCGTTTTCACCCGGATATCAAGCTGAGGAACGGCAACtt > 2:6129547/1‑72 (MQ=255) gACCAGTTCACCAGGCTGGT‑A‑ATGGGTTTTGTCCGGTTTGACCCGGATAACCAGGTTGGGGACGGCAACgtt > 1:4049333/1‑72 (MQ=255) aCCAGTTCACCAGGCTGGT‑A‑ATGGGTTTTGTCCGTTTTCACCCGGATATCAAGCTGAGGAACGGCAACTTTg > 2:5278418/1‑72 (MQ=255) aCCAGTTCACCAGGCTGGT‑A‑ATGGGTTTTGTCCGTTTTCACCCGGATATCAAGCTGAGGAACGGCAACTTTg < 1:1235270/72‑1 (MQ=255) aCCAGTTCACCAGGCTGGT‑A‑ATGGGTTTTGTCCGTTTTCACCCGGATATCAAGCTGAGGAACGGCAACTTTg > 1:4347604/1‑72 (MQ=255) ncAGTTCACCAGGCTGGT‑A‑ATGGGTTTTGTCCGTTTTCACCCGGATATCAAGCTGAGGAACGGCAACTTTGa < 1:861792/71‑1 (MQ=255) aGTTCACCAGGCTGGT‑A‑ATGGGTTTTGTCCGTTTTCACCCGGATATCAAGCTGAGGAACGGCCAACTTGATc > 2:1286977/1‑72 (MQ=255) gTTCACCAGGCTGGT‑A‑ATGGGTTTTGTCCGTTTTCACCCGGATATCAAGCTGAGGAACGGCAACTTTGATcc < 1:2316333/72‑1 (MQ=255) ttCACCAGGCTGGT‑A‑ATGGGTTTTGTCCGTTTTCACCCGGATATCAAGCTGAGGAACGGCAACTTTGATccc < 2:4400808/72‑1 (MQ=255) tCACCAGGCTGGT‑A‑ATGGGTTTTGTCCGTTTTCACCCGGATATCAAGCTGAGGAACGGCAACTTTGATCCCg > 2:3080692/1‑72 (MQ=255) cACCAGGCTGGT‑A‑ATGGGTTTTGTCCGTTTTCACCCGGATATCAAGCTGAGGAACGGCAACTTTGATCCCgg > 1:2233976/1‑72 (MQ=255) cACCAGGCTGGT‑A‑ATGGGTTTTGTCCGTTTTCACCCGGATATCAAGCTGAGGAACGGCAACTTTGATCCCgg > 2:1677549/1‑72 (MQ=255) cACCAGGCTGGT‑A‑ATGGGTTTTGTCCGTTTTCACCCGGATATCAAGCTGAGAAACTGCAACTTTGATCCCgg < 2:7157239/72‑1 (MQ=255) aCCAGGCTGGT‑A‑ATGGGTTTTGTCCGTTTTCACCCGGATATCAAGCTGAGGAACGGCANCTTTGATCCCGGc < 1:2401556/72‑1 (MQ=255) aCCAGGCTGGT‑A‑ATGGGTTTTGTCCGTTTTCACCCGGATATCAAGCTGAGGAACGGCAACTTTTATCCCGGc > 2:3354367/1‑72 (MQ=255) ccAGGCTGGT‑A‑ATGGGTTTTGTCCGTTTTCACCCGGATATCAAGCTGAGGAACGGCAACTTTGATCCCGGCg < 1:2133575/72‑1 (MQ=255) cAGGCTGGT‑A‑ATGGGTTTTGTCCGTTTTCACCCGGATATCAAGCTGAGGAACGGCAACTTTGATCCCGGCGt > 1:3787237/1‑72 (MQ=255) atgCTGTT‑A‑ATGGGTTTTGTCCGTTTTCACCCGGATATCAAGCTGAGGAACGGCAACTTTGATCCCGGCGtt < 2:3550445/70‑1 (MQ=255) aGGCTGGT‑A‑ATGGGTTTTGTCCGTTTTCACCCGGATATCAAGCTGAGGAACGGCAACTTTGATCCCGGCGtt > 2:1573391/1‑72 (MQ=255) ggCTGGT‑A‑ATGGGTTTTGTCCGTTTTCACCCGGATATCAAGCTGAGGAACGGCAACTTTGATCCCGGCGTTc > 2:6339569/1‑72 (MQ=255) ggCGGGT‑A‑ATGGGTTTTGTCCGTTTTCACCCGGATATCAAGCTGAGGAACGGCAACGTTGATCCCGGCGTTc < 2:172745/72‑1 (MQ=255) gCTGGT‑A‑ATGGGTTTTGTCCGTTTTCACCNGGATATCAAGCTGAGGAACGGCAACTTCGATCCCGGCGTTCt > 2:370099/1‑72 (MQ=255) gCTGGT‑A‑ATGGGTTTTGTCCGTTTTCACCCGGATATCAAGCTGAGGAACGGCAACTTTGATCCCGGCGTTCt > 1:1478764/1‑72 (MQ=255) gCTGGT‑A‑ATGGGTTTTGTCCGTTTTCACCCGGATATCAAGCTGAGGAACGGCAACTTTGATCCCGGCGTTCt < 2:5115562/72‑1 (MQ=255) cTGGT‑A‑ATGGGTTTTGTCCGTTTTCACCCGGATATCAAGCTGAGGAACGGCAACTTTGATCCCGGCGTTCTg > 1:5313664/1‑72 (MQ=255) tGGT‑A‑ATGGGTTTTGTCCGTTTTCACCCGGATATCAAGCTGAGGAACGGCAACTTTGATCCCGGCGTTCTGa < 2:962479/72‑1 (MQ=255) ggT‑A‑ATGGGTTTTGTCCGTTTTCACCCGGATATCAAGCTGAGGAACGGCAACTTTGATCCCGGCGTTCTGaa > 1:5995950/1‑72 (MQ=255) gT‑A‑ATGGGTTTTGTCCGTTTTCACCCGGATATCAAGCTGAGGAACGGCAACTTTGATCCCGGCGTTCTGaaa < 1:6052067/72‑1 (MQ=255) t‑A‑ATGGTTTTTGTCCGTTTTCACCCGGATATCAAGCTGAGGAACGGCAACTTTGATCCCGGCGTTCTGaaaa < 2:3488454/72‑1 (MQ=255) a‑aTGGGTTTTGTCCGTTTTCACCCGGATATCAAGCTGAGGAACGGCAACTTTGATCCCGGCGTTCTGAAAAc < 2:3109601/72‑1 (MQ=255) a‑aTGGGTTTTGTCCGTTTTCACCCGGATATCAAGCTGAGGAACGGCAACTTTGATCCCGGCGTTCTGAAAAc < 1:7429712/72‑1 (MQ=255) agtGGGTTTTGTCCGTTTTCACCCGGATATCAAGCTGAGGAACGGCAACTTTGATCCCGGCGTTCTGAAAAc < 1:3374078/70‑1 (MQ=255) aTGGGTTTTGTCCGTTTTCACCCGGATATCAAGCTGAGGAACGGCAACTTTGATCCCGGCGTTCTGAAAACt < 1:5484927/72‑1 (MQ=255) aTGGGNTTTGTCCGTTTTCACCCGGATATCAAGCTGAGGAACGGCAACTTTGATCCCGGCGTTCTGAAAACt < 2:327944/72‑1 (MQ=255) tGGGTTTTGTCCGTTTTCACCCGGATATCAAGCTGAGGAACGGCAACTTTGATCCCGGCGTTCTGAAAACTg > 2:6717765/1‑72 (MQ=255) ggTTTTGTCCGTTTTCACCCGGATATCAAGCTGAGGAACGGCAACTTTGATCCCGGCGTTCTGAAAACTGTa > 1:3056249/1‑72 (MQ=255) tttGTCCGTTTTCACCCGGATATCAAGCTGAGGAACGGGAACTTTGATTCCCGCGTTTTGCAAAATGTTCtt > 2:760926/1‑71 (MQ=255) tttGTCCGTTTTCACCCGGATATCAAGCTGAGGAACGGCAACTTTGATCCCGGCGTTCTGAAAACTGTACTg > 1:2624959/1‑72 (MQ=255) tttGTCCGTTTTCACCCGGATATCAAGCTGAGGAACGGCAACTTTGATCCCGGCGTTCTGAAAACTGTACTg < 2:979690/72‑1 (MQ=255) tGTCCGTTTTCACCCGGATATCAAGCTGAGGAACGGCAACTTTGATCCCGGCGTTCTGAAAACTGTACTGAc < 2:6096078/72‑1 (MQ=255) tGTCCGTTTTCACCCGGATATCAAGCTGAGGAACGGCAACTTTGATCCCGGCGTTCTGAAAACTGTACTGAc < 2:4634764/72‑1 (MQ=255) tGTCCGTTTTCACCCGGATATCAAGCTGAGGAACGGCAACTTTGATCCCGGCGTTCTGAAAACTGTACTGAc < 2:2328683/72‑1 (MQ=255) tGTCCGTTTTCACCCGGATATCAAGCTGAGGAACGGCAACTTTGATCCCGGCGTTCTGAAAACTGTACTGAc < 1:1925127/72‑1 (MQ=255) gTCCGTTTTCACCCGGATATCAAGCTGAGGAACGGCAACTTTGATCCCGGCGTTCTGAAAACTGTACTGAcc < 2:3250355/72‑1 (MQ=255) ccGTTTTCACCCGGATATCAAGCTGAGGAACGGCAACTTTGATCCCGGCGTTCTGAAAACTGTACTGACCAt > 1:4538563/1‑72 (MQ=255) ccGTTTTCACCCGGATATCAAGCTGAGGAACGGCAACTTTGATCCCGGCGTTCTGAAAACTGTACTGACCAt > 1:3865041/1‑72 (MQ=255) ccGTTTTCACCCGGATATCAAGCTGAGGAACGGCAACTTTGATCCCGGCGTTCTGAAAACTGTACTGACCAt > 2:6132326/1‑72 (MQ=255) ccGTTTTCACCCGGATATCAAGCTGAGGAACGGCAACTTTGATCCCGGCGTTCTGAAAACTGTACTGACCAt > 1:6558162/1‑72 (MQ=255) gTTTTCACCCGGATATCAAGCTGAGGAACGGCAACTTTGATCCCGGCGTTCTGAAAACTGTACTGACCATTa < 1:6665351/72‑1 (MQ=255) gTTTTCACCCGGATATCAAGCTGAGGAACGGCAACTTTGATCCCGGCGTTCTGAAAACTGTACTGACCATTa > 1:2183745/1‑72 (MQ=255) gTTTTCACCCGGATATCAAGCTGAGGAACGGCAACTTTGATCCCGGCGTTCTGAAAACTGTACTGACCATTa < 2:4258741/72‑1 (MQ=255) gTTTTCACCCGGATATCAAGCTGAGGAACGGCAACTTTGATCCCGGCGTTCTGAAAACTGTACTGACCATTa < 1:7249008/72‑1 (MQ=255) gTTTTCACCCGGATATCAAGCTGAGGAACGGCAACTTTGATCCCGGCGTTCTGAAAACTGTACTGACCATTa > 2:5732344/1‑72 (MQ=255) ttttCACCCGGATATCAAGCTGAGGAACGGCAACTTTGATCCCGGCGTTCTGAAAACTGTACTGACCATTAc < 1:6432353/72‑1 (MQ=255) ttCACTCGGATATCAAGCTGAGGAACGGCAACTTTGATCCCGGCGTTCTGAAAACTGTACTGACCATTACgg < 2:2540215/72‑1 (MQ=255) tCACCCGGATATCAAGCTGAGGAACGGCAACTTTGATCCCGGCGTTCTGAAAACTGTACTGACCATTACggg > 2:212858/1‑72 (MQ=255) | ACCTTTCAGCGACGAGGTTAATTCGACATTGACCAGTTCACCAGGCTGGT‑A‑ATGGGTTTTGTCCGTTTTCACCCGGATATCAAGCTGAGGAACGGCAACTTTGATCCCGGCGTTCTGAAAACTGTACTGACCATTACGGGTA > NC_012967/2278742‑2278883 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |