| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_012967 | = 3894996 | NA (NA) | 94 (0.330) | 41/142 | 7.6 | 99.0% | intergenic (+26/‑162) | ECB_RS25215/rbsD | IS3‑like element IS150 family transposase/D‑ribose pyranase |
| ? | NC_012967 | 3899045 = | 1 (0.000) | intergenic (+70/‑56) | rbsB/rbsK | ribose ABC transporter substrate‑binding protein RbsB/ribokinase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
ACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_012967/3894926‑3894996‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAAAGCAGGGCA‑CGCGCCACCCTAACACGGTGGCGCATTTTATGGACATCCCGAATATGCAAAACGCAGGC > NC_012967/3899045‑3899115 ACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAA < 1:9766700/72‑1ACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAA < 2:1614416/72‑1ACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAA < 2:5194913/72‑1ACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAA < 2:543528/72‑1 CTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAA > 1:6876215/1‑72 CTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAA < 1:5156098/72‑1 CTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAA < 2:1702547/72‑1 CTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAA > 1:785091/1‑72 CTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAA < 1:3181000/72‑1 TCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAAA > 1:6903778/1‑72 TCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAAA > 2:5707706/1‑72 TCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAAA < 2:752584/72‑1 TCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAAA < 2:3159198/72‑1 CCAATTGAATATCGGAATCAGACCTATATTCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAAAA > 1:1334871/1‑72 CCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAAAA > 2:43531/1‑72 CCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAAAA > 1:4025028/1‑72 CCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAAAA < 2:2414672/72‑1 CCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAAAA > 2:7758333/1‑72 CCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAAAA > 2:8025556/1‑72 CAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAAAAG < 2:5060541/72‑1 CAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAAAAG > 1:4678992/1‑72 aacTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAAAAGC < 1:8162267/69‑1 AATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGNGTCAGTACAAAAAGC < 2:951444/72‑1 AATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAAAAGC > 2:4189166/1‑72 AATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAAAAGC > 2:5492442/1‑72 AATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAAAAGC < 2:9575927/72‑1 ATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCNACGTTTTGGGGTCAGTACAAAAAGCA > 2:1080845/1‑72 ATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTNGGGTCAGTACAAAAAGCA > 1:3825205/1‑72 ATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAAAAGCA > 1:4974314/1‑72 ATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAAAAGCA > 1:3849303/1‑72 TTGAATATCTGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAAAAGCAG > 1:4567132/1‑72 TTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAAAAGCAG > 1:6190466/1‑72 TTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAAAAGCAG > 2:5468965/1‑72 TTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAAAAGCAG > 1:1981347/1‑72 TGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAAAAGCAGG > 1:8954043/1‑72 TGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAAAAGCAGG < 2:1773265/72‑1 TGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAAAAGCAGG < 2:7273973/72‑1 TGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAAAAGCAGG < 2:7367140/72‑1 TGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAAAAGCAGG < 2:7367141/72‑1 TGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAAAAGCAGG > 1:2138371/1‑72 TGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAAAAGCAGG < 2:5200643/72‑1 TGAATATCGGAATCAGACCTATATGCCTAGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAAAAGCAGG < 1:9188047/72‑1 GAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAAAAGCAGGG > 1:8982707/1‑72 GAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAAAAGCAGGG < 2:9173826/72‑1 GAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAAAAGCAGGG < 2:7445622/72‑1 GAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAAAAGCAGGG < 2:334423/72‑1 GAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAAAAGCAGGG < 1:1562540/72‑1 GAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAAAAGCAGGG > 1:2147101/1‑72 GAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAAAAGCAGGG > 2:7168694/1‑72 AATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAAAAGCAGGGC > 1:6293759/1‑72 AATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAAAAGCAGGGC > 2:3465027/1‑72 AATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAAAAGCAGGGC > 2:6860240/1‑72 ATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAAAAGCAGGGCA < 2:1785388/72‑1 ATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAAAAGCAGGGCA > 2:660526/1‑72 ATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAAAAGCAGGGCA > 1:7601926/1‑72 TATCGGAATCAGACCTATATGCCTCGTGTTTNACTGTCNAACTTTTTGGGGTCAGTACAAAAAGCAGGGCA‑C > 1:571400/1‑72 TATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAAAAGCAGGGCA‑C < 1:7482426/72‑1 TATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAAAAGCAGGGCA‑C < 1:5906310/72‑1 TATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAAAAGCAGGGCA‑C > 2:4356452/1‑72 ATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAAAAGCAGGGCA‑CG < 2:6638379/72‑1 ATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAAAAGCAGGGCA‑CG > 1:69783/1‑72 TCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAAAAGCAGGGCA‑CGC > 1:1697178/1‑72 CGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAAAAGCAGGGCA‑CGgg > 1:1832912/1‑70 CGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAAAAGCAGGGCA‑CGgg > 1:1518103/1‑70 CGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAAAAGCAGGGCA‑CGgg > 1:3124130/1‑70 CGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAAAAGCAGGGCA‑CGgc > 2:4827945/1‑70 GGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAAAAGCAGGGCA‑CGggg > 2:4811944/1‑69 GGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAAAAGCAGGGCA‑CGCGC < 1:9205417/72‑1 GAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCGGTACAAAAAGCAGGGCA‑CGCGgc > 2:1386894/1‑70 GAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAAAAGCAGGGCA‑CGCACC > 2:262220/1‑72 AATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGTGGTCAGTACAAAAAGCAGGGCA‑CGCGCCA < 2:6694314/72‑1 AATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAAAAGCAGGGCA‑CGCGCCA < 2:4267566/72‑1 AATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAAAAGCAGGGCA‑CGCGCCA < 1:4422958/72‑1 AATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAAAAGCAGGGCA‑CGCGCCA < 1:4097595/72‑1 ATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAAAAGCAGGGCA‑CGCGCCAC < 1:447503/72‑1 ATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAAAAGCAGGGCA‑CGCGCCAC < 1:9903546/72‑1 CAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAAANGCAGGGCACCGCGCCggt > 1:3795248/1‑69 CAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAAAAGCAGGGCA‑CGCGCCACCC < 1:9341261/72‑1 AGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAAAAGCAGGGCA‑CGCGCCACCCT < 1:8419085/72‑1 GACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAAAAGCAGGGCA‑CGCGCCACCCTA < 2:9364183/72‑1 actTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAAAAGCAGGGCA‑CGCGCCACCCTAA < 2:4241402/69‑1 ACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAAAAGCAGGGCA‑CGCGCCACCCTAA < 1:818089/72‑1 TATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAAAAGCAGGGCA‑CGCGCCACCCTAACAC < 1:6121840/72‑1 TATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAAAAGCAGGGCA‑CGCGCCACCCTAACACGG < 2:9376106/72‑1 TATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAAAAGCAGGGCA‑CGCGCCACCCTAACACGG < 1:72976/72‑1 ATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAAAAGCAGGGCA‑CGCGCCACCCTAACACGGT < 1:2293167/72‑1 TGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAAAAGCAGGGCA‑CGCGCCACCCTAACACGGTG < 2:7055204/72‑1 CTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAAAAGCAGGGCA‑CGCGCCACCCTAACACGGTGGCG < 2:6694213/72‑1 TCCAACTTTTTGGGGTCATTACAAAAAGCAGGGCA‑CGCGCCCCCTTAACACGGTGGCGCATTTTATGGACAT < 2:2113824/72‑1 GGGGTCAGTACAAAAAGCAGGGCA‑CGCTCCACCCTAACACGGTGGCGCATTTTATGGACATCCTGAATATGC > 1:2114785/1‑72 CAGTACAAAAAGCAGGCCA‑CGCGCCACCCTAACACGGTGGCGCATTTTATTGACATCCCGAATATGCAAAAC < 2:8940701/72‑1 CAGAACAAAAAGCAGGGCA‑CGCGCCCCCCTAACACGGTGGCGCATTTTATGGACATCCCGAATATGCAAAAC < 1:9212087/72‑1 aAAAAGGCAGGCCA‑CGCCCCACCCTAACACGGTGGCGCATTTTATGGACATCCCGAATATGCAAAACGCAGG < 1:404587/71‑1 AAAACGCGGGGCA‑CGCGCCCCCCTAACACGGTGGCGCATTTTATGGACATCCCGAATATGCAAAACGCAGGC < 2:5591805/72‑1 ACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_012967/3894926‑3894996‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAAAGCAGGGCA‑CGCGCCACCCTAACACGGTGGCGCATTTTATGGACATCCCGAATATGCAAAACGCAGGC > NC_012967/3899045‑3899115 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |