| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_012967 | = 3894996 | NA (NA) | 94 (0.330) | 41/142 | 7.6 | 99.0% | intergenic (+26/‑162) | ECB_RS25215/rbsD | IS3‑like element IS150 family transposase/D‑ribose pyranase |
| ? | NC_012967 | 3899045 = | 1 (0.000) | intergenic (+70/‑56) | rbsB/rbsK | ribose ABC transporter substrate‑binding protein RbsB/ribokinase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
TCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGAC > NC_012967/3894928‑3894999 | tCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAgta < 1:1597969/72‑3 (MQ=14)tCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGAc < 1:8826247/72‑1 (MQ=34) | TCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGAC > NC_012967/3894928‑3894999 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |