| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_012967 | 3947791 = | 251 (0.880) | 10 (0.040) | 8/132 | 16.9 | 6.6% | coding (16/1656 nt) | aslA | arylsulfatase AslA |
| ? | NC_012967 | 3948049 = | 50 (0.190) | intergenic (‑243/+443) | aslA/hemY | arylsulfatase AslA/protoheme IX biogenesis protein HemY | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
ATCAATTATCAATGCTTAATTACGTCAACATTTTGACGACATGAAACCGGAGCATTTTGCATGGAATTTTCGTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_012967/3947866‑3947791‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gttttAACGGCAATTAATATATATGTTATTAATTGAATGAATTTTATT > NC_012967/3948049‑3948091 ATCAATTATCAATGCTTAATTACGTCAACATTTTGACGACATGAAACCGGAGCATTTTGCATGGAATTTTCG > 2:9008296/1‑72 TCAATTATCAATGCTTAATTACGTCAACATTTTGACGACATGAAACCGGAGCATTTTGCATGGAATTTTCGT < 2:1677510/72‑1 CAATTATCAATGCTTAATTACGTCAACATTTTGACGACATGAAACCGGAGCATTTTGCATGGAATTTTCGTT < 1:2280055/72‑1 CAATTATCAATGCTTAATTACGTCAACATTTTGACGACATGAAACCGGAGCATTTTGCATGGAATTTTCGTT < 1:1124130/72‑1 CAATTATCAATGCTTAATTACGTCAACATTTTGACGACATGAAACCGGAGCATTTTGCATGGAATTTTCGTT < 2:7140981/72‑1 CAATTATCAATGCTTAATTACGTCAACATTTTGACGACATGAAACCGGAGCATTTTGCATGGAATTTTCGTT > 2:5354254/1‑72 CAATTATCAATGCTTAATTACGTCAACATTTTGACGACATGAAACCGGAGCATTTTGCATGGAATTTTCGTT < 1:7772508/72‑1 CAATTATCAATGCTTAATTACGTCAACATTTTGACGACATGAAACCGGAGCATTTTGCATGGAATTTTCGTT > 2:1294119/1‑72 AATTATCAATGCTTAATTACGTCAACATTTTGACGACATGAAACCNGAGCATTTTGCATGGAATTTTCGTTT > 1:674202/1‑72 AATTATCAATGCTTAATTACGTCAACATTTTGACGACATGAAACCGGAGCATTTTGCATGGAATTTTCGTTT > 2:9527055/1‑72 AATTATCAATGCTTAATTACGTCAACATTTTGACGACATGAAACCGGAGCATTTTGCATGGAATTTTCGTTT > 1:9757420/1‑72 ATTATCAATGCTTANNNACGTCAACATTTTGACGNCATGAAACCGGAGCATTTTGCATGGAATTTTCGTTTT < 1:7029319/72‑1 ATTATCAATGCTTAATTACGTCAACATTTTGACGACATGAAACCGGAGCATTTTGCATGGAATTTTCGTTTT < 2:6220909/72‑1 ATTATCAATGCTTAATTACGTCAACATTTTGACGACATGAAACCGGAGCATTTTGCATGGAATTTTCGTTTT > 1:7372036/1‑72 ATTATCAATGCTTAATTACGTCAACATTTTGACGACATGAAACCGGAGCATTTTGCATGGAATTTTCGTTTT > 1:7670166/1‑72 ATTATCAATGCTTAATTACGTCAACATTTTGACGACATGAAACCGGAGCATTTTGCATGGAATTTTCGTTTT < 2:6220890/72‑1 ATTATCAATGCTTAATTACGTCAACATTTTGACGACATGAAACCGGAGCATTTTGCATGGAATTTTCGTTTT < 2:5744877/72‑1 ATTATCAATGCTTAATTACGTCAACATTTTGACGACATGAAACCGGAGCATTTTGCATGGAATTTTCGTTTT < 1:7745373/72‑1 ATTATCAATGCTTAATTACGTCAACATTTTGACGACATGAAACCGGAGCATTTTGCATGGAATTTTCGTTTT > 2:352230/1‑72 ATTATCAATGCTTAATTACGTCAACATTTTGACGACATGAAACCGGAGCATTTTGCATGGAATTTTCGTTTT < 1:8510369/72‑1 CAATGCTTAATTACGTCAACATTTTGACGACATGAAACCGGAGCATTTTGCATGGAATTTTCGTTTTAACGG < 2:3399075/72‑1 ATGCTTAATTACGTCAACATTTTGACGACATGAAACCGGAGCATTTTGCATGGAATTTTCGTTTTAACGGCA < 2:6946082/72‑1 TGCTTAATTACGTCAACATTTTGACGACATGAAACCGGAGCATTTTGCATGGAATTTTCGTTTTAACGGCAA < 2:4507269/72‑1 TTAATTACGTCAACATTTTGACGACATGAAACCGGAGCATTTTGCATGGAATTTTCGTTTTAACGGCAATTA < 2:3836881/72‑1 TCAACATTTTGACGACATGAAACCGGAGCATTTTGCATGGAATTTTCGTTTTAACGGCAATTAATATATATG < 2:7534591/72‑1 TCAACATTTTGACGACATGAAACCGGAGCATTTTGCATGGAATTTTCGTTTTAACGGCAATTAATATATATG < 2:7534609/72‑1 AACATTTTGACGACATGAAACCGGAGCATTTTGCATGGAATTTTCGTTTTAACGGCAATTAATATATATGTT < 2:7378752/72‑1 TTTGACGACATGAAACCGGAGCATTTTGCATGGAATTTTCGTTTTAACGGCAATTAATATATATGTTATTAA < 2:6295558/72‑1 aACATGAAACCGGAGCATTTGGCATCGATTTTTCTTTTTATCGGCAATTAATATATATGTTATTAATTGAAT < 2:5744642/71‑1 cgaAGCATTTGGCATGAAATTTTCGTTTTCACGGCAATTAATATATATGTTATTAATTGAATGAATTTTATT < 2:9298899/69‑1 ATCAATTATCAATGCTTAATTACGTCAACATTTTGACGACATGAAACCGGAGCATTTTGCATGGAATTTTCGTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_012967/3947866‑3947791‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gttttAACGGCAATTAATATATATGTTATTAATTGAATGAATTTTATT > NC_012967/3948049‑3948091 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |