| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_012967 | = 4487051 | 62 (0.220) | 12 (0.050) | 10/124 | 15.4 | 16.1% | coding (1102/1218 nt) | nanX | MFS transporter |
| ? | NC_012967 | = 4487275 | 71 (0.280) | coding (97/1119 nt) | nanY | 2,7‑anhydro‑N‑acetylneuraminate hydratase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TTGGATACTTTGGCGCTGAATTAGCTCGTTTTATGAATATGCATGATAATGCAAAAATTACATGTGTATACGATCCTGAAAATGGAGAAAATATTGCCCGTGAATTGCAGTGTATCAATATGTCAAGCTTGGATGCTTTAGTC > NC_012967/4487204‑4487346 | ttggATACTTTGGCGCTGAATTAGCTCGTTTTATGAATATGCATGATAATGCAAAAATTACATGTGTATACg > 2:7341466/1‑72 (MQ=255) tggATACTTTGGCGCTGAATTAGCTCGTTTTATGAATATGCATGATAATGCAAAAATTACATGTGTATACGa > 2:8515414/1‑72 (MQ=255) tggATACTTTGGCGCTGAATTAGCTCGTTTTATGAATATGCATGATAATGCAAAAATTACATGTGTATACGa > 2:8311022/1‑72 (MQ=255) ggctACTTTGGCGCTGAATTAGCTCGTTTTATGAATATGCATGATAATGCAAAAATTACATGTGTATACGAt > 2:3788554/4‑72 (MQ=255) ggATACTTTGGCGCCGAATTAGCTCGTTTTATGAATATGCATGATAATGCAAAAATTACATGTGTATACGAt > 1:4902981/1‑72 (MQ=255) aTACTTTGGCGCTGAATTAGCTCGTTTTATGAATATGCATGATAATGCAAAAATTACATGTGTATACGATcc > 1:9287711/1‑72 (MQ=255) aTACTTTGGCGCTGAATTAGCTCGTTTTATGAATATGCATGATAATGCAAAAATTACATGTGTATACGATcc > 1:2950075/1‑72 (MQ=255) tACTTTGGCGCTGAATTAGCTCGTTTTATGAATATGCATGATAATGCAAAAATTACATGTGTATACGATCCt < 2:4020279/72‑1 (MQ=255) tttGGCGCTGAATTAGCTCGTTTTATGAATATGCATGATAATGCAAAAATTACATGTGTATACGATCCTGaa > 1:5683427/1‑72 (MQ=255) ttGGCGCTGAATTAGCTCGTTTTATGAATATGCATGATAATGCAAAAATTACATGTGTATACGATCCTGaaa < 1:1381551/72‑1 (MQ=255) tGGCGCTGAATTAGCTCGTTTTATGAATATGCATGATAATGCAAAAATTACATGTGTATACGATCCTGaaat < 2:6514524/72‑2 (MQ=255) ggCGCTGAATTAGCTCGTTTTATGAATATGCATGATAATGCAAAAATTACATGTGTATACGATCCTGaaatg < 2:2299326/72‑3 (MQ=255) ggCGCTGAATTAGCTCGTTTTATGAATATGCATGATAATGCAAAAATTACATGTGTATACGATCCTGAAAAt < 1:1601624/72‑1 (MQ=255) ggCGCTGAATTAGCTCGTTTTATGAATATGCATGATAATGCAAAAATTACATGTGTATACGATCCTGAAAAt > 1:4434215/1‑72 (MQ=255) gcgcTGAATTAGCTCGTTTTATGAATATGCATGATAATGCAAAAATTACATGTGTATACGATCCTGAAAATg > 2:7829665/1‑72 (MQ=255) gcgcTGAATTAGCTCGTTTGATGAATATGCATGATAATGCAAAAATTACATGTGTATACGATCCTGaaatgt < 2:1372620/72‑4 (MQ=255) gcTGAATTAGCTCGTTTTATGAATATGCATGATAATGCAAAAATTACATGTGTATACGATCCTGAAAATGga > 2:5633017/1‑72 (MQ=255) gcTGAATTAGCTCGTTTTATGAATATGCATGATAATGCAAAAATTACATGTGTATACGATCCTGAAAATGga > 1:5276769/1‑72 (MQ=255) gAATTAGCTCGTTTTATGAATATGCATGATAATGCAAAAATTACATGTGTATACGATCCTGAAAATGGAGaa > 2:309772/1‑72 (MQ=255) gAATTAGCTCGTTTTATGAATATGCATGATAATGCAAAAATTACATGTGTATACGATCCTGAAAATGGAGaa > 1:5049589/1‑72 (MQ=255) aaTTAGCTCGTTTTATGAATATGCATGATAATGCAAAAATTACATGTGTATACGATCCTGAAAATGGAGaaa < 1:6163807/72‑1 (MQ=255) aTTAGCTCGTTTTATGAATATGCATGATAATGCAAAAATTACATGTGTATACGATCCTGAAAATGGAGaaaa > 1:7923257/1‑72 (MQ=255) ttAGCTCGTTTTATGAATATGCATGATAATGCAAAAATTACATGTGTATACGATCCTGAAAATGGAGAAAat < 1:4872040/72‑1 (MQ=255) ttAGCTCGTTTTATGAATATGCATGATAATGCAAAAATTACATGTGTATACGATCCTGAAAATGGAGAAAat < 1:61930/72‑1 (MQ=255) tAGCTCGTTTTATGAATATGCATGATAATGCAAAAATTACATGTGTATACGATCCTGAAAATGGAGAAAata < 1:6797815/72‑1 (MQ=255) tAGCTCGTTTTATGAATATGCATGATAATGCAAAAATTACATGTGTATACGATCCTGAAAATGGAGAAAata < 1:5275857/72‑1 (MQ=255) aGCTCGTTTTATGAATATGCATGATAATGCAAAAATTACATGTGTATACGATCCTGAAAATGGAGAAAatat > 2:236811/1‑72 (MQ=255) aGCTCGTTTTATGAATATGCATGATAATGCAAAAATTACATGTGTATACGATCCTGAAAATGGAGAAAatat < 1:9075386/72‑1 (MQ=255) tCGTTTTATGAATATGCATGATAATGCAAAAATTACATGTGTATACGATCCTGAAAATGGAGAAAATATTGc > 2:6850764/1‑72 (MQ=255) gTTTTATGAATATGCATGATAATGCAAAAATTACATGTGTATACGATCCTGAAAATGGAGAAAATATTGccc > 1:7552589/1‑72 (MQ=255) gTTTTATGAATATGCATGATAATGCAAAAATTACATGTGTATACGATCCTGAAAATGGAGAAAATATTGccc < 1:4196039/72‑1 (MQ=255) gTTTTATGAATATGCATGATAATGCAAAAATTACATGTGTATACGATCCTGAAAATGGAGAAAATATTGccc > 2:4072780/1‑72 (MQ=255) ttttATGAATATGCATGATAATGCAAAAATTACATGTGTATACGATCCTGAAAATGGAGAAAATATTGCCCg > 2:2068728/1‑72 (MQ=255) tttATGAATATGCATGATAATGCAAAAATTACATGTGTATACGATCCTGAAAATTGAGAAAATATTGCCCGt < 2:5438386/72‑1 (MQ=255) tttATGAATATGCATGATAATGCAAAAATTACATGTGTATACGATCCTGAAAATGGAGAAAATATTGCCCGt > 2:5929646/1‑72 (MQ=255) ttATGAATATGCATGATAATGCAAAAATTACATGTGTATACGATCCTGAAAATGGAGAAAATATTGCCCGTg < 2:8403112/72‑1 (MQ=255) gAATATGCATGATAATGCAAAAATTACATGTGTATACGATCCTGAAAATGGAGAAAATATTGCCCGTGAAtt < 2:939991/72‑1 (MQ=255) gAATATGCATGATAATGCAAAAATTACATGTGTATACGATCCTGAAAATGGAGAAAATATTGCCCGTGAAtt < 1:160296/72‑1 (MQ=255) gAATATGCATGATAATGCAAAAATTACATGTGTATACGATCCTGAAAATGGAGAAAATATTGCCCGTGAAtt > 1:2325171/1‑72 (MQ=255) aaTATGCATGATAATGCAAAAATTACATGTGTATACGATCCTGAAAATGGAGAAAATATTGCCCGTGAATTg < 2:5697263/72‑1 (MQ=255) atatGCATGATAATGCAAAAATTACATGTGTATACGATCCTGAAAATGGAGAAAATATTGCCCGTGAATTGc < 2:7306149/72‑1 (MQ=255) tatGCATGATAATGCAAAAATTACATGTGTATACGATCCTGAAAATGGAGAAAATATTGCCCGTGAATTGCa > 2:2270802/1‑72 (MQ=255) atGCATGATAATGCAAAAATTACATGTGTATACGATCCTGAAAATGGAGAAAATATTGCCCGTGAATTGCAg > 2:3993222/1‑72 (MQ=255) cATGATAATGCAAAAATTACATGTGTATACGATCCTGAAAATGGAGAAAATATTGCCCGTGAATTGCAgtgt < 2:8462854/72‑1 (MQ=255) aTGATAATGCAAAAATTACATGTGTATACGATCCTGAAAATGGAGAAAATATTGCCCGTGAATTGCAGTGTa > 2:5183611/1‑72 (MQ=255) aTGATAATGCAAAAATTACATGTGTATACGATCCTGAAAATGGAGAAAATATTGCCCGTGAATTGCAGTGTa < 2:160639/72‑1 (MQ=255) tGATAATGCAAAAATTACATGTGTATACGATCCTGAAAATGGAGAAAATATTGCCCGTGAATTGCAGTGTAt < 2:5669558/72‑1 (MQ=255) gATAATGCAAAAATTACATGTGTATACGATCCTGAAAATGGAGAAAATATTGCCCGTGAATTGCAGTGTATc > 2:4470546/1‑72 (MQ=255) aTAATGCAAAAATTACATGTGTATACGATCCTGAAAATGGAGAAAATATTGCCCGTGAATTGCAGTGTATCa < 1:7149464/72‑1 (MQ=255) tAATGCAAAAATTACATGTGTATACGATCCTGAAAATGGAGAAAATATTGCCCGTGAATTGCAGTGTATCaa < 2:7962134/72‑1 (MQ=255) tGCAAAAATTACATGTGTATACGATCCTGAAAATGGAGAAAATATTGCCCGTGAATTGCAGTGTATCAatat < 2:5318865/72‑1 (MQ=255) gCAAAAATTACATGTGTATACGATCCTGAAAATGGAGAAAATATTGCCCGTGAATTGCAGTGTATCAATATg > 1:8141865/1‑72 (MQ=255) cAAAAANTACATGTGTATACGATCCTGAAAATGGAGAAAATATTGCCCGTGAATTGCAGTGTATCAATATGt < 2:691667/72‑1 (MQ=255) aaaaaTTACATGTGTATACGATCCTGAAAATGGAGAAAATATTGCCCGTGAATTGCAGTGTATCAATATGTc > 1:9833711/1‑72 (MQ=255) aaaaaTTACATGTGTATACGATCCTGAAAATGGAGAAAATATTGCCCGTGAATTGCAGTGTATCAATATGTc < 2:8503448/72‑1 (MQ=255) aaaaaTTACATGTGTATACGATACTGAAAATGGAGAAAATATTGCCCGTGAATTGCAGTGTATCAATATGTc < 1:2723227/72‑1 (MQ=255) aTTACATGTGTATACGATCCTGAAAATGGAGAAAATATTGCCCGTGAATTGCAGTGTATCAATATGTCAAGc > 1:3051434/1‑72 (MQ=255) tACATGTGTATACGATCCTGAAAATGGAGAAAATATTGCCCGTGAATTGCAGTGTATCAATATGTCAAGCtt > 1:3211107/1‑72 (MQ=255) tACATGTGTATACGATCCTGAAAATGGAGAAAATATTGCCCGTGAATTGCAGTGTATCAATATGTCAAGCtt > 2:5919199/1‑72 (MQ=255) tACATGTGTATACGATCCTGAAAATGGAGAAAATATTGCCCGTGAATTGCAGTGTATCAATATGTCAAGCtt < 1:5349001/72‑1 (MQ=255) tACATGTGTATACGATCCTGAAAATGGAGAAAATATTGCCCGTGAATTGCAGTGTATCAATATGTCAAGCtt > 2:5509900/1‑72 (MQ=255) tACATGTGTATACGATCCTGAAAATGGAGAAAATATTGCCCGTGAATTGCAGTGTATCAATATGTCAAGCtt < 1:5820847/72‑1 (MQ=255) aCATGTGTATACGATCCTGAAAATGGAGAAAATATTGCCCGTGAATTGCAGTGTATCAATATGTCAAGCTTg > 1:4125114/1‑72 (MQ=255) aCATGTGTATACGATCCTGAAAATGGAGAAAATATTGCCCGTGAATTGCAGTGTATCAATATGTCAAGCTTg < 1:9351323/72‑1 (MQ=255) aTGTGTATACGATCCTGAAAATGGAGAAAATATTGCCCGTGAATTGCAGTGTATCAATATGTCAAGCTTGGa > 1:3847234/1‑72 (MQ=255) tgtgTATACGATCCTGAAAATGGAGAAAATATTGCCCGTGAATTGCAGTGTATCAATATGTCAAGCTTGGAt > 2:8979639/1‑72 (MQ=255) tgtgTATACGATCCTGAAAATGGAGAAAATATTGCCCGTGAATTGCAGTGTATCAATATGTCAAGCTTGGAt > 2:5238904/1‑72 (MQ=255) gtgtATACGATCCTGAAAATGGAGAAAATATTGCCCGTGAATTGCAGTGTATCAATATGTCAAGCTTGGATg > 1:824138/1‑72 (MQ=255) gtgtATACGATCCTGAAAATGGAGAAAATATTGCCCGTGAATTGCAGTGTATCAATATGTCAAGCTTGGATg > 1:5209446/1‑72 (MQ=255) gtgtATACGATCCTGAAAATGGAGAAAATATTGCCCGTGAATTGCAGTGTATCAATATGTCAAGCTTGGATg < 2:7639152/72‑1 (MQ=255) gtgtATACGATCCTGAAAATGGAGAAAATATTGCCCGTGAATTGCAGTGTATCAATATGTCAAGCTTGGATg > 1:4571434/1‑72 (MQ=255) gtgtATACGATCCTGAAAATGGAGAAAATATTGCCCGTGAATTGCAGTGTATCAATATGTCAAGCTTGGATg > 2:5324342/1‑72 (MQ=255) tgtATACGATCCTGAAAATGGAGAAAATATTGCCCGTGAATTNCAGTGTATCAATATGTCAAGCTTGGATGc < 2:861405/72‑1 (MQ=255) tgtATACGATCCTGAAAATGGAGAAAATATTGCCCGTGAATTGCAGTGTATCAATATGTCAAGCTTGGATGc > 1:2773168/1‑72 (MQ=255) tataCGATCCTTAAAATGGAGAAAATATTGCCCGTGAATTGCAGTGTATCAATATGTCAAGCTTGGATGCtt < 2:8284914/72‑1 (MQ=255) tataCGATCCTGAAAATTGAGAAAATATTGCCCGTGAATTGCAGTGTATCAATATGTCAAACTTGGATGCtt < 2:7787086/72‑1 (MQ=255) tataCGATCCTGAAAATGGAGAAAATCTTGCCCGTGAATTGCAGTGTATCAATATGTCAAGCTTGGATGCtt > 2:76546/1‑72 (MQ=255) tataCGATCCTGAAAATGGAGAAAATATTGCCCGTGAATTGCAGTGTATCAATATGTCAAGCTTGGATGCtt < 2:7345406/72‑1 (MQ=255) tataCGATCCTGAAAATGGAGAAAATATTGCCCGTGAATTGCAGTGTATCAATATGTCAAGCTTGGATGCtt > 1:307672/1‑72 (MQ=255) aCGATCCTGAAAATGGAGAAAATATTGCCCGTGAATTGCAGTGTATCAATATGTCAAGCTTGGATGCTTTAg < 1:3522759/72‑1 (MQ=255) gATCCTGAAAATGGAGAAAATATTGCCCGTGAATTGCAGTGTATCAATATGTCAAGCTTGGATGCTTTAGtc < 1:243444/72‑1 (MQ=255) gATCCTGAAAATGGAGAAAATATTGCCCGTGAATTGCAGTGTATCAATATGTCAAGCTTGGATGCTTTAGtc > 1:2212629/1‑72 (MQ=255) gATCCTGAAAATGGAGAAAATATTGCCCGTGAATTGCAGTGTATCAATATGTCAAGCTTGGATGCTTTAGtc > 2:3348971/1‑72 (MQ=255) gATCCTGAAAATGAAGAAAATATTGCCCGTGAATTGCAGTGTATCAATATGTCAAGCTTGGATGCTTTAGtc > 1:3944387/1‑72 (MQ=255) | TTGGATACTTTGGCGCTGAATTAGCTCGTTTTATGAATATGCATGATAATGCAAAAATTACATGTGTATACGATCCTGAAAATGGAGAAAATATTGCCCGTGAATTGCAGTGTATCAATATGTCAAGCTTGGATGCTTTAGTC > NC_012967/4487204‑4487346 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |