| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_012967 | 717135 = | 27 (0.090) | 18 (0.070) | 12/124 | 14.4 | 32.3% | coding (62/312 nt) | ECB_RS23290 | DUF6258 family protein |
| ? | NC_012967 | 717390 = | 52 (0.210) | intergenic (+5/‑328) | ECB_RS23290/ECB_RS03505 | DUF6258 family protein/ISAs1 family transposase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
CAAATTTTCATCAGGTATAAACACAGCTGGATTGAGAATAAATTCAAAGAAAAAATAATTGAATAACCATGTTATGTATAGACATTTTAGATGGAACGAACCAGAGGAAGGCATGCCTCCGACTTGGGTTATATGGGCACG > NC_012967/717320‑717460 | cAAATTTTCATCAGGTATAAACACAGCTGGATTGAGAATAAATTCAAAGAAAAAATAATTGAATAACCATGt < 1:9480677/72‑1 (MQ=255)cAAATTTTCATCAGGTATAAACACAGCTGGATTGAGAATAAATTCAAAGAAAAAATAATTGAATAACCATGt < 1:2986730/72‑1 (MQ=255) aaaTTTTCATCAGGTATAAACACAGCTGGATTGAGAATAAATTCAAAGAAAAAATAATTGAATAACCATGtt < 1:9934699/72‑1 (MQ=255) aaaTTTTCATCAGGTATAAACACAGCTGGATTGAGAATAAATTCAAAGAAAAAATAATTGAATAACCATGtt < 1:109014/72‑1 (MQ=255) aaaTTTTCATCAGGTATAAACACAGCTGGATTGAGAATAAATTCAAAGAAAAAATAATTGAATAACCATGtt < 1:9454324/72‑1 (MQ=255) aaaTTTTCATCAGGTATAAACACAGCTGGATTGAGAATAAATTCAAAGAAAAAATAATTGAATAACCATGtt > 1:3054805/1‑72 (MQ=255) aaaTTTTCATCAGGTATAAACACAGCTGGATTGAGAATAAATTCAAAGAAAAAATAATTGAATAACCATCtt < 2:6852426/72‑1 (MQ=255) aTTTTCATCAGGTATAAACACAGCTGGATTGAGAATAAATTCAAAGAAAAAATAATTGAATAACCATCttct < 2:8847191/72‑3 (MQ=255) ttttCATCAGGTATAAACACAGCTGGATTGAGAATAAATTCAAAGAAAAAATAATTGAATAACCATGTTATg < 1:411628/72‑1 (MQ=255) tttCATCAGGTATAAACACAGCTGGATTGAGAATAAATTCAAAGAAAAAATAATTGAATAACCATGTTATGt < 1:1193762/72‑1 (MQ=255) ttCATCAGGTATAAACACAGCTGGATTGAGAATAAATTCAAAGAAAAAATAATTGAATAACCATGTTATGta < 1:9303240/72‑1 (MQ=255) ttCATCAGGTATAAACACAGCTGGATTGAGAATAAATTCAAAGAAAAAATAATTGAATAACCATGTTATGta < 1:2293055/72‑1 (MQ=255) ttCATCAGGTATAAACACAGCTGGATTGAGAATAAATTCAAAGAAAAAATAATTGAATAACCATGTTATGta < 1:4910618/72‑1 (MQ=255) tcatcaGGTATAAACACAGCTGGATTGAGAATAAATTCAAAGAAAAAATAATTGAATAACCATGTTATGtat > 1:4864588/1‑72 (MQ=255) tcatcaGGTATAAACACAGCTGGATTGAGAATAAATTCAAAGAAAAAATAATTGAATAACCATGTTATGtat < 2:9635404/72‑1 (MQ=255) tcatcaGGTATAAACACAGCTGGATTGAGAATAAATTCAAAGAAAAAATAATTGAATAACCATGTTATGtat > 2:8942672/1‑72 (MQ=255) tcatcaGGTATAAACACAGCTGGATTGAGAATAAATTCAAAGAAAAAATAATTGAATAACCATGTTATGtat < 1:6813216/72‑1 (MQ=255) catcaGGTATAAACACAGCTGGATTGAGAATAAATTNNNNNAAAAAATAATTGAATAACCATGTTATGtata < 1:7106766/72‑1 (MQ=255) catcaGGTATAAACACAGCTGGATTGAGAATAAATTCAAAGAAAAAATAATTGAATAACCATGTTATGtata < 1:3679660/72‑1 (MQ=255) catcaGGTATAAACACAGCTGGATTGAGAATAAATTCAAAGAAAAAATAATTGAATAACCATGTTATGtata < 1:375125/72‑1 (MQ=255) catcaGGTATAAACACAGCTGGATTGAGAATAAATTCAAAGAAAAAATAATTGAATAACCATGTTATGtata > 1:8776536/1‑72 (MQ=255) atcaGGTATAAACACAGCTGGATTGAGAATAAATTCAAAGAAAAAATAATTGAATAACCATGTTATGTATAg < 1:9207791/72‑1 (MQ=255) atcaGGTATAAACACAGCTGGATTGAGAATAAATTCAAAGAAAAAATAATTGAATAACCATGTTATGTATAg < 1:8102222/72‑1 (MQ=255) atcaGGTATAAACACAGCTGGATTGAGAATAAATTCAAAGAAAAAATAATTGAATAACCATGTTATGTATAg > 1:7332773/1‑72 (MQ=255) tcaGGTATAAACACAGCTGGATTGAGAATAAATTCAAAGAAAAAATAATTGAATAACCATGTTATGTATAGa > 1:3255604/1‑72 (MQ=255) caGGTATAAACACAGCTGGATTGAGAATAAATTCAAAGAAAAAATAATTGAATAACCATGCTATGTATAGAc > 2:4056446/1‑72 (MQ=255) aGGTATAAACACAGCTGGATTGAGAATAAATTCAAAGAAAAAATAATTGAATAACCATGTTATGTATAGACa > 1:2480852/1‑72 (MQ=255) aGGTATAAACACAGCTGGATTGAGAATAAATTCAAAGAAAAAATAATTGAATAACCATGTTATGTATAGACa > 2:2939128/1‑72 (MQ=255) aGGTATAAACACAGCTGGATTGAGAATAAATTCAAAGAAAAAATAATTGAATAACCATGTTATGTATAGACa > 1:2480823/1‑72 (MQ=255) aGGTATAAACACAGCTGGATTGAGAATAAATTCAAAGAAAAAATAATTGAATAACCATGTTATGTATAGACa < 1:303453/72‑1 (MQ=255) ggTATAAACACAGCTGGATTGAGAATAAATTCAAAGAAAAAATAATTGAATAACCATGTTATGTATAGACAt < 1:4713191/72‑1 (MQ=255) aaaCACAGCTGGATTGAGAATAAATTCAAAGAAAAAATAATTGAATAACCATGTTATGTATAGACATTTTAg > 2:2803026/1‑72 (MQ=255) acaGCTGGATTGAGAATAAATTCAAAGAAAAAATAATTGAATAACCATGTTATGTATAGACATTTTAGATgg > 2:2878548/1‑72 (MQ=255) caGCTGGATTGAGAATAAATTCAAAGAAAAAATAATTGAATAACCATGTTATGTATAGACATTTTAGATGga < 1:7525452/72‑1 (MQ=255) caGCTGGATTGAGAATAAATTCAAAGAAAAAATAATTGAATAACCATGTTATGTATAGACATTTTAGATGga > 1:6301902/1‑72 (MQ=255) caGCTGGATTGAGAATAAATTCAAAGAAAAAATAATTGAATAACCATGTTATGTATAGACATTTTAGATGga > 1:9498678/1‑72 (MQ=255) aGCTGGATTGAGAATAAATTCAAAGAAAAAATAATTGAATAACCATGTTATGTATAGACATTTTAGATGgaa > 2:499972/1‑72 (MQ=255) cTGGATTGAGAATAAATTCAAAGAAAAAATAATTGAATAACCATGTTATGTATAGACATTTTAGATNgaacg > 2:871750/1‑72 (MQ=255) cTGGATTGAGAATAAATTCAAAGAAAAAATAATTGAATAACCATGTTATGTATAGACATTTTAGATGgaacg > 1:1478297/1‑72 (MQ=255) agaATAAATTCAAAGAAAAAATAATTGAATAACCATGTTATGTATNGACATTTTAGATGGAACGAACCagag > 2:1055092/1‑72 (MQ=255) agaATAAATTCAAAGAAAAAATAATTGAATAACCATGTTATGTATAGACATTTTAGATGGAACGAACCagca > 2:3482711/1‑70 (MQ=255) aaTAAATTCAAAGAAAAAATAATTGAATAACCATGTTATGTATAGACATTTTAGATGGAACGAACCAGAGGa > 1:8106108/1‑72 (MQ=255) cAAAGAAAAAATAATTGAATAACCATGTTATGTATAGACATTTTAGATGGAACGAACCAGAGGAAGGCATGc < 1:2157228/72‑1 (MQ=255) aaGAAAAAATAATTGAATAACCATGTTATGTATAGACATTTTAGATGGAACGAACCAGAGGAAGGCATGCCt > 1:8350938/1‑72 (MQ=255) aaaaaaTAATTGAATAACCATGTTATGTATAGACATTTTAGATGGAACGAACCAGAGGAAGGCATGCCTCCg > 2:4649028/1‑72 (MQ=255) ataatTGAATAACCATGTTATGTATAGACATTTTAGATGGAACGAACCAGAGGAAGGCATGCCTCCGACTTg > 2:3194479/1‑72 (MQ=255) aatTGAATAACCATGTTATGTATAGACATTTTAGATGGAACGAACCAGAGGAAGGCATGCCTCCGACTTggg > 2:2172257/1‑72 (MQ=255) atTGAATAACCATGTTATGTATAGACATTTTAGATGGAACGAACCAGAGGAAGGCATGCCTCCGACTTGGGt < 1:6564306/72‑1 (MQ=255) atTGAATAACCATGTTATGTATAGACATTTTAGATGGAACGAACCAGAGGAAGGCATGCCTCCGACTTGGGt > 1:9027203/1‑72 (MQ=255) atTGAATAACCATGTTATGTATAGACATTTTAGATGGAACGAACCAGAGGAAGGCATGCCTCCGACTTGGGt < 1:7141738/72‑1 (MQ=255) ttGAATAACCATGTTATGTACAGACATTTTAGATGGAACGAACCAGAGGAAGGCATGCCTCCGACTTGGGtt > 2:7220480/1‑72 (MQ=255) ttGAATAACAATGTTATGTATAGACATTTTAGATGNNNNNAACCAGAGGAAGGCATGCCTCCGACTTGGGtt < 1:2292480/72‑1 (MQ=255) aaTAACCATGTTATGTATAGACATTTTAGATGGAACGAACCAGAGGCAGGCATGCCTCCGCCTTGGGTtata > 2:4500588/1‑72 (MQ=255) aTAACCATGTTATGTATAGACATTTTAGATGGAACGAACCAGAGGAAGGCATGCCTCCGACTTGGGTTatat > 2:1247803/1‑72 (MQ=255) tAACCATGTTATGTATAGACATTTTAGATGGAACGAACCAGAGGAAGGCATGCCTCCGACTTGGGTTATATg > 1:6538898/1‑72 (MQ=255) aaCCATGTTATGTATAGACATTTTAGATGGAACGAACCAGAGGAAGGCATGCCTCCGACTTGGGTTATATgg > 2:6545961/1‑72 (MQ=255) aCCATGTTATGTCTAGACATTTTAGATGGAACGAACCAGAGGAAGGCATGCCTCCGACTTGGGTTATATggg < 1:1275634/72‑1 (MQ=255) aCCATGTTATGTATAGACATTTTAGATGGAACGAACCAGAGGAAGGCATGCCTCCGACTTGGGTTATATggg > 1:8980084/1‑72 (MQ=255) aCCATGTTATGTATAGACATTTTAGATGGAACGAACCAGAGGAAGGCATGCCTCCGACTTGGGTTATATggg < 2:3361367/72‑1 (MQ=255) aCCATGTTATGTATAGACATTTTAGATGGAACGAACCAGAGGAAGGCATGCCTCCGACTTGGGTTATATggg < 1:9906706/72‑1 (MQ=255) ccATGTTATGTATAGACATTTTAGATGGAACGAACCAGAGGAAGGCATGCCTCCGACTTGGGTTATATGGGc < 1:9487518/72‑1 (MQ=255) ccATGTTATGTATAGACATTTTAGATGGAACGAACCAGAGGAAGGCATGCCTCCGACTTGGGTTATATGGGc > 1:5871291/1‑72 (MQ=255) cATGTTATGTATAGACATTTTAGATGGAACGAACCAGAGGAAGGCATGCCTCCGACTTGGGTTATATGGGCa > 1:5100020/1‑72 (MQ=255) aTGTTATGTATAGACATTTTAGATGGAACGAACCAGAGGAAGGCATGCCTCCGACTTGGGTTATATGGGCAc > 2:6393957/1‑72 (MQ=255) aTGTTATGTATAGACATTTTAGATGGAACGAACCAGAGGAAGGCATGCCTCCGACTTGGGTTATATGGGCAc > 2:2670967/1‑72 (MQ=255) tGTTATGTATAGACATTTTAGATGGAACGAACCAGAGGAAGGCATGCCTCCGACTTGGGTTATATGGGCACg > 2:9926111/1‑72 (MQ=255) | CAAATTTTCATCAGGTATAAACACAGCTGGATTGAGAATAAATTCAAAGAAAAAATAATTGAATAACCATGTTATGTATAGACATTTTAGATGGAACGAACCAGAGGAAGGCATGCCTCCGACTTGGGTTATATGGGCACG > NC_012967/717320‑717460 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |