| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_012967 | 2829863 = | 108 (0.380) | 4 (0.020) | 4/104 | 17.4 | 5.3% | intergenic (‑130/‑340) | ECB_RS14010/fucI | sugar ABC transporter ATP‑binding protein/L‑fucose isomerase |
| ? | NC_012967 | 2830124 = | 64 (0.310) | intergenic (‑391/‑79) | ECB_RS14010/fucI | sugar ABC transporter ATP‑binding protein/L‑fucose isomerase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 107 total aligned reads displayed.
CCCTCACATTTCAACAACAAAAAAGTTGTGCATAAAAAGCCTACAAACCTAAGCTAACTCGAGTTAGCAAATAATGACCAATACTACTGCTTCGGTGGTTTCCTTTCTCCGCCTTAGCAGAGCGCCAATAAAGCGAGATGAGG > NC_012967/2830053‑2830195 | cccTCACATTTCAACAACAAAAAAGTTGTGCATAAAAAGCCTACAAACCTAAGCTAACTCGAGTTAGCAaat < 2:298327/72‑1 (MQ=255)cccTCACATTTCAACAACAAAAAAGTTGTGCATAAAAAGCCTACAAACCTAAGCTAACTCGAGTTAGCAaat > 1:5167969/1‑72 (MQ=255)cccTCACATTTCAACAACAAAAAAGTTGTGCATAAAAAGCCTACAAACCTAAGCTAACTCGAGTTAGCAaat < 1:4686687/72‑1 (MQ=255)cccTCACATTTCAACAACAAAAAAGTTGTGCATAAAAAGCCTACAAACCTAAGCTAACTCGAGTTAGCAaat > 2:1494625/1‑72 (MQ=255) ccTCACATTTCAACAACAAAAAAGTTGTGCATAAAAAGCCTACAAACCTAAGCTAACTCGAGTTAGCAaata < 1:9699229/72‑1 (MQ=255) cTCACATTTCAACAACAAAAAAGTTGTGCATAAAAAGCCTACAAACCTAAGCTAACTCGAGTTAGCAaataa > 1:7493400/1‑72 (MQ=255) tCACATTTCAACAACAAAAAAGTTGTGCATAAAAAGCCTACAAACCTAAGCTAACTCGAGTTAGCAaataat > 2:3408407/1‑72 (MQ=255) tCACATTTCAACAACAAAAAAGTTGTGCATAAAAAGCCTACAAACCTAAGCTAACTCGAGTTAGCAaataat > 2:2345214/1‑72 (MQ=255) cacaTTTCAACAACAAAAAAGTTGTGCATAAAAAGCCTACAAACCTAAGCTAACTCGAGTTAGCAAATAATg > 2:7648702/1‑72 (MQ=255) cacaTTTCAACAACAAAAAAGTTGTGCATAAAAAGCCTACAAACCTAAGCTAACTCGAGTTAGCAAATAATg > 1:1238865/1‑72 (MQ=255) acaTTTCAACAACAAAAAAGTTGTGCATAAAAAGCCTACAAACCTAAGCTAACTCGAGTTAGCAAATAATGa > 2:7521753/1‑72 (MQ=255) acaTTTCAACAACAAAAAAGTTGTGCATAAAAAGCCTACAAACCTAAGCTAACTCGAGTTAGCAAATAATGa > 2:6409140/1‑72 (MQ=255) aTTTCAACAACAAAAAAGTTGTGCATAAAAAGCCTACAAACCTAAGCTAACTCGAGTTAGCAAATAATGAcc > 1:611855/1‑72 (MQ=255) aTTTCAACAACAAAAAAGTTGTGCATAAAAAGCCTACAAACCTAAGCTAACTCGAGTTAGCAAATAATGAcc > 2:6162032/1‑72 (MQ=255) aTTTCAACAACAAAAAAGTTGTGCATAAAAAGCCTACAAACCTAAGCTAACTCGAGTTAGCAAATAATGAcc > 2:6162022/1‑72 (MQ=255) tCAACAACAAAAAAGTTGTGCATAAAAAGCCTACAAACCTAAGCTAACTCGAGTTAGCAAATAATGACCAAt < 2:1764832/72‑1 (MQ=255) tCAACAACAAAAAAGTTGTGCATAAAAAGCCTACAAACCTAAGCTAACTCGAGTTAGCAAATAATGACCAAt < 1:9221842/72‑1 (MQ=255) caacaacaaAAAAGTTGTGCATAAAAAGCCTACAAACCTAAGCTAACTCGAGTTAGCAAATAATGACCAAta < 2:2535476/72‑1 (MQ=255) aacaacaaAAAAGTTGTGCATGAAAAGCCTACAAACCTAAGCTAACTCGAGTTAGCAAATAATGACCAAtac < 2:581424/72‑1 (MQ=255) aacaacaaAAAAGTTGTGCATAAAAAGCCTACAAACCTAAGCTAACTCGAGTTAGCAAATAATGACCAAtac > 1:6686670/1‑72 (MQ=255) aacaacaaAAAAGTTGTGCATAAAAAGCCTACAAACCTAAGCTAACTCGAGTTAGCAAATAATGACCAAtac > 1:5207740/1‑72 (MQ=255) acaacaaAAAAGTTGTGCATAAAAAGCCTACAAACCTAAGCTAACTCGAGTTAGCAAATAATGACCAAtact > 1:7347068/1‑72 (MQ=255) caacaaAAAAGTTGTGCATAAAAAGCCTACAAACCTAAGCTAACTCGAGTTAGCAAATAATGACCAAtacta > 1:7421535/1‑72 (MQ=255) caacaaAAAAGTTGTGCATAAAAAGCCTACAAACCTAAGCTAACTCGAGTTAGCAAATAATGACCAAtacta > 2:5970743/1‑72 (MQ=255) caacaaAAAAGTTGTGCATAAAAAGCCTACAAACCTAAGCTAACTCGAGTTAGCAAATAATGACCAAtacta < 1:8644956/72‑1 (MQ=255) aacaaAAAAGTTGTGCATAAAAAGCCTACAAACCTAAGCTAACTCGAGTTAGCAAATAATGACCAAtactac < 1:6771608/72‑1 (MQ=255) acaaAAAAGTTGTGCATAAAAAGCCTACAAACCTAAGCTAACTCGAGTTAGCAAATAATGACCAATactact < 2:1466188/72‑1 (MQ=255) aaaGTTGTGCATAAAAAGCCTACAAACCTAAGCTAACTCGAGTTAGCAAATAATGACCAATACTACTGCTTc > 1:9279485/1‑72 (MQ=255) aaGTTGTGCATAAAAAGCCTACAAACCTAAGCTAACTCGAGTTAGCACATAATGACCAATACTACTGCTTCg > 1:8987646/1‑72 (MQ=255) aGTTGTGCATAAAAAGCCTACAAACCTAAGCTAACTCGAGTTAGCAAATAATGACCAATACTACTGCTTCgg < 1:5249400/72‑1 (MQ=255) aGTTGTGCATAAAAAGCCTACAAACCTAAGCTAACTCGAGTTAGCAAATAATGACCAATACTACTGCTTCgg < 1:5299200/72‑1 (MQ=255) ttGTGCATAAAAAGCCTACAAACCTAAGCTAACTCGAGTTAGCAAATAATGACCAATACTACTGCTTCggtg > 2:8765316/1‑72 (MQ=255) tgtgCATAAAAAGCCTACAAACCTAAGCTAACTCGAGTTAGCAAATAATGACCAATACTACTGCTTCggtgg < 2:9250772/72‑1 (MQ=255) tgCATAAAAAGCCTACAAACCTAAGCTAACTCGAGTTAGCAAATAATGACCAATACTACTGCTTCGGTGGtt > 1:8619362/1‑72 (MQ=255) cATAAAAAGCCTACAAACCTAAGCTAACTCGAGTTAGCAAATAATGACCAATACTACTGCTTCGGTGGTTTc > 2:7206707/1‑72 (MQ=255) tAAAAAGCCTACAAACCTAAGCTAACTCGAGTTAGCAAATAATGACCAATACTACTGCTTCGGTGGTTTCCt > 1:2046368/1‑72 (MQ=255) aaaaaGCCTACAAACCTAAGCTAACTCGAGTTAGCAAATAATGACCAATAGTACTGCTTCGGTGGTTTCCtt > 2:573933/1‑72 (MQ=255) aaaaaGCCTACAAACCTAAGCCAACTCGAGTTAGCAAATAATGACCAATACTACTGCTTCGGCGGGTTGCtt > 2:3531530/1‑72 (MQ=255) aaaGCCTACAAACATAAGCTAACTCGAGTTAGCAAATAATGACCAATACTACTGCTTCGGTGGTTTCCTTtc > 2:1840212/1‑72 (MQ=255) aaGCCTACAAACCTAAGCTAACTCGAGTTAGCAAATAATGACCAATACTACTGCTTCGGTGGTTTCCTTtct > 1:5773498/1‑72 (MQ=255) aaGCCTACAAACCTAAGCTAACTCGAGTTAGCAAATAATGACCAATACTACTGCTTCGGTGGTTTCCTTtct > 1:7975475/1‑72 (MQ=255) aGCCTACAACCCTAAGCTAACTCGAGTTAGCAAATAATGACCAATACTACTGCTTCGGTGGTTTCCTTtctc > 2:6122849/1‑72 (MQ=255) gCCTACAAACCTAAGCTAACTCGAGTTAGNAAATAATGACCAATACTACTGCTTCGGTGGTTTCCTTTCAcc > 2:839590/1‑72 (MQ=255) gCCTACAAACCTAAGCTAACTCGAGTTAGCAAATAATGACCAATACTACTGCTTCGGTGGTTTCCTTTCTcc < 1:1435933/72‑1 (MQ=255) ccTACAAACCTAAGCTAACTCGAGTTAGCAAATAATGACCAATACTACTGCTTCGGTGGTTTCCTTTCTCCg > 1:7238506/1‑72 (MQ=255) ccTACAAACCTAAGCTAACTCGAGTTAGCAAATAATGACCAATACTACTGCTTCGGTGGTTTCCTTTCTCCg > 1:2111165/1‑72 (MQ=255) ccTACAAACCTAAGCTAACTCGAGTTAGCAAATAATGACCAATACTACTGCTTCGGTGGGTTCCTTTCTccn > 1:1142874/1‑71 (MQ=255) cTACAAACCTAAGCTAACTCGAGTTAGCAAATAATGACCAATACTACTGCTTCGGTGGTTTCCTTTCTCCGc < 2:4723789/72‑1 (MQ=255) tACAAACCTAAGCTAACTCGAGTTAGCAAATAATGACCAATACTACTGCTTCGGTGGTTTCCTTTCTCCGcc > 1:4971588/1‑72 (MQ=255) ncAACCCTAAGCTAACTCGAGTTAGCAAATAATGACCAATACTACTGCTTCGGTGGTTTCCTTTCTCCGCCt < 1:1153214/71‑1 (MQ=255) aCAAACCTAAGCTAACTCGAGTTAGCAAATAATGACCAATACTACTGCTTCGGTGGTTTCCTTTCTCCGCCt > 1:7954345/1‑72 (MQ=255) cAAACCTAAGCTAACTCGAGTTAGCAAATAATGACCAATACTACTGCTTCGGTGGCTTCCTTTCTCCGCCtt > 1:2947604/1‑72 (MQ=255) aaaCCTAAGCTAACTCGAGTTAGCAAATAATGACCAATACTACTGCTTCGGTGGTTTCCTTTCTCCGCCTTa > 1:5970513/1‑72 (MQ=255) aaCCTAAGCTAACTCGAGTTAGCAAATAATGACCAATACTACTGCTTCGGTGGTTTCCTTTCTCCGCCTTAg < 2:9078667/72‑1 (MQ=255) gcTAAGCTAACTCGAGTTAGCAAATAATGACCAATACTACTGCTTCGGTGGTTTCCTTTCTCCGCCTTAGCa > 1:173758/2‑72 (MQ=255) ccTAAGCTAACTCGAGTTAGCAAATAATGACCAATACTACTGCTTCGGTGGTTTCCTTTCTCCGCCTTAGCa > 1:8689032/1‑72 (MQ=255) ccTAAGCTAACTCGAGTTAGCAAATAATGACCAATACTACTGCTTCGGTGGTTTCCTTTCTCCGCCTTAGCa > 1:6207718/1‑72 (MQ=255) cTAAGCTAACTCGAGTTAGCAAATAATGACCAATACTACTGCTTCGGTGGTATTCTTTCTCCGTCTTAGCag > 2:893588/1‑72 (MQ=255) aaGCTAACTCGAGTTAGCAAATAATGACCAATACTACTGCTTCGGTGGTTTCCTTTCTCCGCCTTAGCagag > 1:8724864/1‑72 (MQ=255) aaGCTAACTCGAGTTAGCAAATAATGACCAATACTACTGCTTCGGTGGTTTCCTTTCTCCGCCTTAGCagag > 1:4629431/1‑72 (MQ=255) aacTAACTCGAGTTAGCAAATAATGACCAATACTACTGCTTCGGTGGTTTCCTTTCTCCGCCTTAGCAGAgc < 2:68963/70‑1 (MQ=255) gCTAACTCGAGTTAGCAAATAATGACCAATACTACTGCTTCGGTGGGTTCCTTTCTCCGCCTTAGCAGcgcg > 2:3526102/1‑72 (MQ=255) gCTAACTCGAGTTAGCAAATAATGACCAATACTACTGCTTCGGTGGGTTCCTTTCTCCGCCCTAGCagaagg > 1:1234807/1‑69 (MQ=255) tAACTCGAGTTAGCAAATAATGACCAATACTACTNCTTCGGTGGTTTCCTTTCTCCGCCTTAGCAGAGCGcc > 1:524039/1‑72 (MQ=255) tAACTCGAGTTAGCAAATAATGACCAATACTACTGCTTCGGTGGTTTCCTTTCTCCGCCTTAGCAGAGCGcc > 2:9711595/1‑72 (MQ=255) tAACTCGAGTTAGCAAATAATGACCAATACTACTGCTTCGGTGGTTTCCTTTCTCCGCCTTAGCAGAGCGcc > 2:7960151/1‑72 (MQ=255) aaCTCGAGTTAGCAAATAATGACCAATACTACTGCTTCTGTGGTTTCCTTTCTCCGCCTTAGCAGAGCGCCa > 1:8858025/1‑72 (MQ=255) aCTCGAGTTAGCAAATAATGACCAATACTACTGCTTCGGTGGTTTCCTTTCTCCGCCTTNGCAGAGCGCCaa > 1:1091751/1‑72 (MQ=255) cTCGAGTTAGCAAATAATGACCAATACTACTGCTTCGGTGGTTTCCTTTCTCCGCCTTAGCAGAGCGCCAAt > 1:8039746/1‑72 (MQ=255) cTCGAGTTAGCAAATAATGACCAATACTACTGCTTCGGTGGTTTCCTTTCTCCGCCTTAGCAGAGCGCCAAt > 2:9517344/1‑72 (MQ=255) cTCGAGTTAGCAAATAANGACCAATACTACTGCTTCGGTGGTTTCCTTTCTCCGCCTTAGCAGAGCGCCAAt > 1:875860/1‑72 (MQ=255) tCGAGTTAGCAAATAATGACCAATACTACTGCTTCGGTGGTTTCCTTTCTCCGCCTTAGCAGAGCGCCAATa > 2:2383211/1‑72 (MQ=255) tCGAGNTAGCAAATAATGACCAATACTACTGCTTCGGTGGTTTCCTTTCTCCGCCTTAGCAGAGCGCCAATa > 1:950157/1‑72 (MQ=255) cGAGTTAGCAAATAATGACCAATACTACTGCTTCGGTGGTTTCCTTTCTCCGCCTTAGCAGAGCGCCAATaa > 1:5767160/1‑72 (MQ=255) cGAGTTAGCAAATAATGACCAATACTACTGCTTCGGTGGTTTCCTTTCTCCGCCTTAGCAGAGCGCCAATaa < 1:3842887/72‑1 (MQ=255) cGAGTTAGCAAATAATGACCAATACTACTGCTTCGGTGGTTTCCTTTCTCCGCCTTAGCAGAGCGCCAATaa > 1:796619/1‑72 (MQ=255) gAGTTAGCAAATAATGACCAATACTACTGCTTCGGTGGTTTCCTTTCTCCGCCNTAGCAGAGCGCCAATaaa > 1:3821489/1‑72 (MQ=255) aGTTAGCAAATAATGACCAATACTACTGCTTCGGTGGTTTCCTTTCTCCGCCTTAGCAGAGCGCCAATAAAg > 1:2029695/1‑72 (MQ=255) aGTTAGCAAATAATGACCAATACTACTGCTTCGGTGGTTTCCTTTCTCCGCCTTAGCAGAGCGCCAATAAAg > 2:9346162/1‑72 (MQ=255) gTTAGCAAATAATGACCAATACTACTGCTTCGGTGGTTTCCTTTCTCCGCCTTAGCAGAGCGCCAATAAAGc > 1:9331274/1‑72 (MQ=255) gTTAGCAAATAATGACCAATACTACTGCTTCGGTGGTTTCCTTTCTCCGCCTTAGCAGAGCGCCAATAAAGc < 2:5844972/72‑1 (MQ=255) ttAGCAAATAATGACCAATACTACTGCTTCGGTGGTTTCCTTTCTCCGCCTTAGCCGATCGCCAATAAAGCg > 1:2875169/1‑72 (MQ=255) tAGCAAATAATGACCAATACTACTGCTTCGGTGGTTTCCTTTCTCCGCCTTAGCCGAGCGCCAATAAAGCga > 2:750683/1‑72 (MQ=255) aGCAAATAATGACCAATACTACTGCTTCGGTGGTTTCCTTTCTCCGCCTTAGCAGAGCGCCAATAAAGCgag > 1:4448090/1‑72 (MQ=255) aGCAAATAATGACCAATACTACTGCTTCGGTGGTTTCCTTTCTCCGCCTTAGCAGAGCGCCAATAAAGCgag < 1:1212637/72‑1 (MQ=255) aGCAAATAATGACCAATACTACTGCTTCGGTGGTTTCCTTTCTCCGCCTTAGCAGAGCGCCAATAAAGCgag > 1:5550353/1‑72 (MQ=255) aGCAAATAATGACCAATACTACTGCTTCGGTGGTTTCCTTTCTCCGCCTTAGCAGAGCGCCAATAAAGCgag > 2:3996295/1‑72 (MQ=255) gCAAATAATGACCAATACTACTGCTTCGGTGGTTTCCTTTCTCCGCCTTAGCAGAGCGCCAATAAAGCgaga < 2:4907026/72‑1 (MQ=255) gCAAATAATGACCAATACTACTGCTTCGGTGGTTTCCTTTCTCCGCCTTAGCAGAGCGCCAATAAAGCgaga < 1:1977413/72‑1 (MQ=255) gCAAATAATGACCAATACTACTGCTTCGGTGGTTTCCTTTCTCCGCCTTAGCAGAGCGCCAATAAAGCgaga > 2:3239887/1‑72 (MQ=255) cAAATANTGACCAATACTACTGCTTCGGTGGTTTCCTTTCTCCGCCTTAGCAGAGCGCCAATAAAGCGAGAt < 2:691878/72‑1 (MQ=255) cAAATAATGACCAATACTACTGCTTCGGTGGTTTCCTTTCTCCGCCTTAGCAGAGCGCCAATAAAGCGAGAt > 1:6244758/1‑72 (MQ=255) aaaTAATGACCAATACTACTGCTTCGGTGGTTTCCTTTCTCCGCCTTAGCAGAGCGCCAATAAAGCGAGATg > 1:4883845/1‑72 (MQ=255) aataatGACCAATACTACTGCTTCGGTGGTTTCCTTTCTCCGCCTTAGCAGAGCGCCAATAAAGCGAGATGa > 1:594308/1‑72 (MQ=255) ataatGACCAATACTACTGCTTCGGTGGTTTCCTTTCTCCGCCTTAGCAGAGCGCCAATAAAGCGAGATGAg > 2:9159543/1‑72 (MQ=255) ataatGACCAATACTACTGCTTCGGTGGTTTCCTTTCTCCGCCTTAGCAGAGCGCCAATAAAGCGAGATGAg < 1:4176650/72‑1 (MQ=255) taatGACCAATACTACTGCTTCGGTGGTTTCCTTTCTCCGCCTTAGCAGAGCGCCAATAAAGCGAGATGAgg > 1:4806568/1‑72 (MQ=255) taatGACCAATACTACTGCTTCGGTGGTTTCCTTTCTCCGCCTTAGCAGAGCGCCAATAAAGCGAGATGAgg > 1:9192150/1‑72 (MQ=255) taatGACCAATACTACTGCTTCGGTGGTTTCCTTTCTCCGCCTTAGCAGAGCGCCAATAAAGCGAGATGAgg > 2:8796240/1‑72 (MQ=255) taatGACCAATACTACTGCTTCGGTGGTTTCCTTTCTCCGCCTTAGCAGAGCGCCAATAAAGCGAGATGAgg > 1:2057921/1‑72 (MQ=255) | CCCTCACATTTCAACAACAAAAAAGTTGTGCATAAAAAGCCTACAAACCTAAGCTAACTCGAGTTAGCAAATAATGACCAATACTACTGCTTCGGTGGTTTCCTTTCTCCGCCTTAGCAGAGCGCCAATAAAGCGAGATGAGG > NC_012967/2830053‑2830195 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |