| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_012967 | = 3652532 | NA (NA) | 249 (1.000) | 110/140 | 0.2 | 100% | intergenic (+25/+254) | ECB_RS25190/glyS | IS3‑like element IS150 family transposase/glycine‑‑tRNA ligase subunit beta |
| ? | NC_012967 | 3896274 = | 0 (0.000) | coding (690/1506 nt) | rbsA | ribose ABC transporter ATP‑binding protein RbsA | |||||
Only 100 of 266 total aligned reads displayed.
GACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACa‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_012967/3652462‑3652532‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTGGAAGATCAATATCCGCACCTGGACAAAGCGCCGG > NC_012967/3896274‑3896344 GANTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA < 2:747645/72‑1GACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA > 2:2259409/1‑72GACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA < 1:7704005/72‑1GACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA > 1:5645190/1‑72GACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA > 2:8084318/1‑72GACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA < 2:7875087/72‑1GACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA < 1:3897821/72‑1GACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA > 2:5193391/1‑72GACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA < 2:6336021/72‑1GACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA > 1:1824523/1‑72 ACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAG < 1:2304176/72‑1 ACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAG > 2:8911645/1‑72 ACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAG > 2:1058871/1‑72 CTCCAATTGAATATCGGAATCAGNCCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGA > 1:5908799/1‑72 CTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGA > 1:3169175/1‑72 CTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGA < 2:2717169/72‑1 CCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGATT > 1:6370455/1‑72 ATTGAATATCGGAATCAGACCTATATGCCTCGTGTTAAACTGTCCAACTTTTTGGGGTCAGTACAGATTCGC > 1:7284738/1‑72 TTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGATTCGCT > 1:609792/1‑72 GAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGATTCGCTGA > 1:2237180/1‑72 GAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGATTCGCTGA > 2:8239222/1‑72 GAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGATTCGCTGA > 1:6916968/1‑72 AATATCTGAATCAGACCTATATGCCTCGCGTTTANCTGTCCAACTTTTTGGGGTCAGTACAGATTCGCTGAT > 1:496685/1‑72 AATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGATTCGCTGAT > 1:6323513/1‑72 AATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGATTCGCTGAT > 2:6954592/1‑72 ATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGATTCGCTGATT > 2:8797544/1‑72 TATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGATTCGCTGATTG > 2:7283610/1‑72 TATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGATTCGCTGATTG < 1:8333660/72‑1 ATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGATTCGCTGATTGA < 2:5063458/72‑1 GGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGATTCGCTGATTGAGAT < 2:6238042/72‑1 GGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGATTCGCTGATTGAGAT < 2:1176043/72‑1 GGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGATTCGCTGATTGAGAT < 2:1496892/72‑1 GAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGATTCGCTGATTGAGATG > 1:2600282/1‑72 AATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGATTCGCTGATTGAGATGA > 1:7100245/1‑72 AATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGATTCGCTGATTGAGATGA > 1:8606318/1‑72 TCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGATTCGCTGATTGAGATGATG < 2:5733334/72‑1 CAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGATTCGCTGATTGAGATGATGG > 1:5260960/1‑72 CAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGATTCGCTGATTGAGATGATGG > 1:745687/1‑72 AGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGATTCGCTGATTGAGATGATGGT < 1:8318887/72‑1 AGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGATTCGCTGATTGAGATGATGGT < 2:8171894/72‑1 GACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGATTCGCTGATTGAGATGATGGTG < 2:7491732/72‑1 GACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGATTCGCTGATTGAGATGATGGTG < 2:2000449/72‑1 ACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGATTCGCTGATTGAGATGATGGTGG > 2:3910085/1‑72 TATATGCCTCGTGTTTAACTGTCCAGCTTTTTGGGGTCAGTACAGATTCGCTGAGTGAGATGATGGTGGGTC < 1:783876/72‑1 TATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGATTCGCTGATTGAGATGATGGTGGGTC > 2:1819950/1‑72 TATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGATTCGCTGATTGAGATGATGGTGGGTCGa > 1:2467825/1‑71 TATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGATTCGCTGATTGAGATGATGGTGGGTCGC < 1:6250211/72‑1 TATGCCTCGTGTATAACTGTCCAACTTTTTGGGGTCAGTACAGATTCGCTGATTGAGATGATGGTGGGTCGC < 1:1497586/72‑1 TGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGATTCGCTGATTGAGATGATGGTGGGTCGCAA > 1:7992321/1‑72 GCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGATTCGCTGATTGAGATGATGGTGGGTCGCAAG > 2:2143212/1‑72 GCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGATTCGCTGATTGAGATGATGGTGGGTCGCAAG > 2:1254948/1‑72 GCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGATTCGCTGATTGAGATGATGGTGGGTCGCAAG > 1:5186496/1‑72 CCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGC > 1:7525492/1‑72 CTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCT < 1:5501905/72‑1 CTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCT < 1:2624822/72‑1 CTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCT > 2:4536331/1‑72 CTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGATTCGATGATTGAGATGATGGTGGGTCGCAAGCT > 2:2074887/1‑72 TCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTG < 1:6710292/72‑1 TCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTG < 2:4184700/72‑1 CGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTGG > 1:4241666/1‑72 GTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTGGA < 2:7320520/72‑1 TGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTGGAA > 1:8770402/1‑72 GTTTAACTGTCCAACTTTTTGGGGTCAGTACAGATTCGCTGATTGAGATGATGGTGGGTCGCAGGCTGGAAG > 2:6825059/1‑72 GTTTAACTGTCCAACTTTTTGGGGTCAGTACAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTGGAcg > 1:1414407/1‑70 GTTTAACTGTCCAACTTTTTGGGGTCAGTACAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTGGAAG > 2:1381039/1‑72 GTTTAACTGTCCAACTTTTTGGGGTCAGTACAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTGGAAG > 1:4317581/1‑72 TTTAACTGTCCAACTTTTTGGGGTCAGTACAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTGGAAGA < 2:3712712/72‑1 TAACTGTCCAACTTTTTGGGGTCAGTACAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTGGAAGATC > 2:5545168/1‑72 TAACTGTCCAACTTTTTGGGGTCAGTACAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTGGAAGATC > 2:2910762/1‑72 AACTGTCCAACTTTTTGGGGTCAGTACAGATTCGCTGATTGAGATGATGGTGGGTGGCAAGCTGGAAGCTCA > 1:4578293/1‑72 AACTGTCCAACTTTTTGGGGTCAGTACAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTGGAAGATCA < 1:1353306/72‑1 ACTGTCCAACTTTTTGGGGTCAGTACAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTGGAAGATCAA > 2:8666547/1‑72 ACTGTCCAACTTTTTGGGGTCAGTACAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTGGAAGATCAA > 2:7799393/1‑72 ACTGTCCAACTTTTTGGGGTCAGTACAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTGGAAGATCAA > 2:6640001/1‑72 CTGTCCAACTTTTTGGGGTCAGTACAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTGGAAGATCAAT > 2:7734139/1‑72 TGTCCAACTTTTTGGGGTCAGTACAGAGTCGCTGATTGAGATGATGGTGGGTCGCAAGCTGGAAGATCAATA < 1:1258766/72‑1 GTCCAACTTTTTGGGGTCAGTACAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTGGAAGATCAATAT > 1:8664871/1‑72 GTCCAACTTTTTGGGGTCAGTACAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTGGAAGATCAATAT > 1:2091373/1‑72 GTCCAACTTTTTGGGGTCAGTACAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTGGAAGATCAATAT > 2:3602933/1‑72 TCCAACTTTTTGGGGTCAGTACAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTGGAAGATCAATATC > 2:6719256/1‑72 CCAACTTTTTGGGGTCAGTACAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTGGAAGATCAATATCC < 1:1904331/72‑1 CCAACTTTTTGGGGTCAGTACAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTGGAAGATCAATATCC > 1:9019598/1‑72 CAACTTTTTGGGGTCAGTACAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTGGAAGATCAATATCCG < 2:4701572/72‑1 AACTTTTTGGGGTCAGTACAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTGGAAGATCAATATCCGC > 1:5735272/1‑72 ACTTTTTGGGGTCAGTACAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTGGAAGATCAATATCCGCA > 1:7152144/1‑72 TTTTGGGGTCAGTACAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTGGAAGATCAATATCCGCACCT < 2:4317580/72‑1 TTTGGGGTCAGTACAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTGGAAGATCAATATCCGCACCTG > 2:5761168/1‑72 TTGGGGTCAGTACAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTGGAAGATCAATATCCGCACCTGG < 2:3492402/72‑1 TGGGGTCAGTACAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTGGAAGATCAATATCCGCACCTGGA > 2:9054767/1‑72 GGGTCAGTACAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTGGAAGATCAATATCCGCACCTGGACA < 1:414803/72‑1 GGTCAGTACAGATTCGCTGATTGAGATGATGGTGGGTCGAAAGCTGGAGGATCAATATCCGCACCGGGACAA > 1:94591/1‑72 GTCAGTACAGATTCGCTGNTTGAGATGATGGTGGGTCGCAAGCTGGAAGATCAATATCCGCACCTGGACAAA < 1:3562260/72‑1 GTCAGTACAGATTCGCGGATTGAGAGGATGGTGGGTCGCAAGCTGGAAGATCAATATCCGCACCTGGACAAA < 2:1899974/72‑1 TCAGTACAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTGGAAGATCAATATCCGCACCTGGACAAAG < 2:2164639/72‑1 CAGTACAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTGGAAGATCAATATCCGCACCTGGACAAAGC < 1:3246088/72‑1 AGTACAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTGGAAGATCAATATCCGCACCTGGACAAAGCn > 1:1044368/1‑71 GTACAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTGGAAGATCAATATCCGCACCTGGACAAAGCGC > 1:2838911/1‑72 TACAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTGGAAGATCAATATCCGCACCTGGACAAAGCGCC < 2:4418321/72‑1 CAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTGGAAGATCAATATCCGCACCTGGACAAAGCGCCGG > 2:7396105/1‑72 CAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTGGAAGATCAATATCCGCACCTGGACAAAGCGCCGG < 1:3789358/72‑1 GACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACa‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_012967/3652462‑3652532‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTGGAAGATCAATATCCGCACCTGGACAAAGCGCCGG > NC_012967/3896274‑3896344 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |