| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_012967 | 3482676 = | 114 (0.460) | 68 (0.300) | 38/130 | 6.8 | 46.9% | coding (992/2706 nt) | malT | HTH‑type transcriptional regulator MalT |
| ? | NC_012967 | = 3482700 | 50 (0.220) | coding (1016/2706 nt) | malT | HTH‑type transcriptional regulator MalT | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
ATCCCTGGGCCATCCAGCTTTCTGCGGCGGCACGGTGGATTTCCGGCAGCTCCGCCGCCAGTTCCCACTGGCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_012967/3482750‑3482676‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcagcTCCGCCGCCAGTTCCCACTGGCAGCGCTGGCGCAGGAAGTTACCAAACAGCGGGTGATAGCAGAACCACTC < NC_012967/3482700‑3482630 ATCCCTGGGCCATCCAGCTTTCTGCGGCGGCACGGTGGATTTCCGGCAGCTCCGCCGCCAGTTCCCACTGGC > 2:4627160/1‑72 TCCCTGGGCCATCCAGCTTTCTGCGGCGGCACGGTGGATTTCCGGCAGCTCCGCCGCCAGTTCCCACTGGCA < 1:6918020/72‑1 CCCTGGGCCATCCAGCTTTCTGCGGCGGCACGGTGGATTTCCGGCAGCTCCGCCGCCAGTTCCCACTGGCAG > 1:8616505/1‑72 CCCGGGGCCCTCCGGCTTTCGGCGGCGGCAGGGTGGATTTCCGGCAGCTCCGCCGCCAGTTCCCACTGGCAG < 2:5468914/72‑1 ccgGGGCCCTCCAGCTTCCTGCGGCGGCACGGTGGATTCCCGGCAGCTCCGCCGCCAGTTCCCACTGGCAGC < 2:2432249/69‑1 CCTGGGCCATCCAGCTTTCTGCGGCGGCACGGTGGATTTCCGGCAGCTCCGCCGCCAGTTCCCACTGGCAGC > 1:3443448/1‑72 CCTGGGCCATCCAGCTTTCTGCGGCGGCACGGTGGATTTCCGGCAGCTCCGCCGCCAGTTCCCACCGGCAGC > 1:1825690/1‑72 CTGGGCCATCCAGCTTTCTGCGGCGGCACGGTGGATTTCCGGCAGCTCCGCCGCCAGTTCCCACTGGCAGCT < 2:7899424/72‑1 TGGGCCATCCAGCTTTCTGCGGCGGCACGGTGGATTTCCGGCAGCTCCGCCGCCAGGTCCCACTGGCAGCTC > 2:8760896/1‑72 ggcCCATCCGTCTTTCTGCGGCGGCAGGGTGGTTTTCCGGCAGCTCCGCCGCCAGTTCCCACTGGCAGCTCC < 2:5249515/69‑1 ggcCCATCCAGCTTCCGGCGGCGGCACGGTGGATTTCCGGCAGCTCCGCCGCCAGTTCCCACTGGCAGCTCC < 1:5989009/69‑1 cCCATCCAGCTTTCTGCGGCGGCACGGTGGATTTCCGGCAGCTCCGCCGCCAGTTCCCACTGGCAGCTCCGC < 1:6474391/71‑1 CCAGCTTTCTGCGGCGGCACGGTGGATTTCCGGCAGCTCCGCCGCCAGTTCCCACTGGCAGCTCCGCCGCCA < 1:8532212/72‑1 cgGCTTTCTGCGGCGGCCCGGTGGATTTCCGGCAGCTCCGCCGCCAGTTCCCACTGGCAGCTCCGCCGCCAG < 2:6980955/70‑1 cgGCTGTCTGCGGCTGCACGGTGGCTTTCCGGCAGCTCCGCCGCCAGTTCCCACTGGCAGCTCCGCCGCCAG < 2:8416127/70‑1 ccGCTTTCTGCGGCGGCACGGTGGATTTCCGGCAGCTCCGCCGCCAGTTCCCACTGGCAGCTCCGCCGCCAG < 2:2919227/70‑1 CAGCTTTCTGCGGCGGCACGGTGGATTTCCGGCAGCTCCGCCGCCAGTTCCCACTGGCAGCTCCGCCGCCAG < 1:7083152/72‑1 CAGCTTTCTGCGGCGGCACGGTGGATTTCCGGCAGCTCCGCCGCCAGTTCCCACCGGCAGCTCCCTCGCCcc > 2:4835563/1‑70 CAGCTTTCTGCGGCGCAACGGTGGTTTTCCGGCAGCTCCGCCGCCAGTTCCCACTGGCAGCTCCGCCGCCAG < 2:5188464/72‑1 gGCTTTCGGCGGCGGCCGGGTGGATTTCCGGCAGCTCCGCCGCCAGTTCCCACTGGCAGCTCCGCCGCCAGT < 1:6771639/71‑1 GCTTTCGGCGGCGGCACGGTGGATTTCGGGCAGCTCCGCCGCCAGTTCCCACTGGCAGCTCCGCCGCCAGTT < 1:7347391/72‑1 TTCTGCGGCGGCACGGTGGATTTCCGGCAGCTCCGCCGCCAGTTTCCACTGGCATCTCCGCCGCCCGTGCCC > 2:4296019/1‑72 TCTGCGGCGGCACGGTGGATTTCCGGCAGCTCCGCCGCCAGTTCCCACTGGCAGCTCCGCCGCCAGTTCCCA < 1:6027560/72‑1 CGGCGGCGCGGTGGATTTCGGGCAGCTCCGCCGCCAGTTCCCACTGGCAGCTCCGCCGCCAGTTCCCACTGG < 1:8257278/72‑1 GCGGCACGGTGGATTTCCGGCAGCTCCGCCGCCAGTTCCCACTGGCAGCTCCGCCGCCAGTTCCCACTGGCA > 1:7096528/1‑72 GCGGCACGGTGGATTTCCGGCAGCTCCGCCGCCAGTTCCCACTGGCAGCTCCGCCGCCAGTTCCCACTGGCA < 2:4717847/72‑1 ccCGGTGGATGTCCGCCGCCTCCGCCGCCAGTTCCCACTGGCAGCTCCGCCGCCAGTTCCCACTGGCAGCGC < 2:8039981/70‑1 GGTCGATTGCCGGCAGCTCCGCCGCCAGTTCCCACTGGCAGCTCCGCCGCCAGTTCCCACTGGCAGCGCTGG < 1:7254088/72‑1 TGGATTCCCGGCAGCTCCGCCGCCAGTTCCCACTGGCAGCTCCGCCGCCAGTTCCCACTGGCAGCGCTGGCG < 1:6478531/72‑1 GGATTTCCGGCAGCTCCGCCGCCAGTTCCCACTGGCAGCTCCGCCGCCAGTTCCCACTGGCAGCGCTGGCGC < 2:8061258/72‑1 cgcCAGCGCCGCCGCCAGTTCCCCCGGGCAGCTCCGCCGCCAGTTCCCACTGGCAGCGCTGGCGCAGGAAGT < 1:3784831/69‑1 TCCGCCGCCAGTTCCCACTGGCAGCTCCGCCGCCAGTTCCCACTGGCCGCGCCGGGGCCGGGAGGTACCAAA > 1:4686284/1‑72 TCCGCCGCCAGTTCCCACTGGCAGCTCCGCCGCCAGTTCCCACCGGCAGCGCACGCGCAGGAAGGTAACAAA > 1:1923040/1‑72 ctCCGCCAGTTCCCACTGGCAGCTCCGCCGCCAGTTCCCACTGGCAGCGCTGGCGCAGGAAGTTACCAAACA < 1:5895965/70‑1 CGCCGCCAGTTCCCACTGGCAGCTCCGCCGCCAGTTCCCACCGGCAGCGCGGGCGCAGGAAGTTACCATACA > 1:40972/1‑72 GCCGCCAGTTCCCACTGGCAGCTCCGCCGCCAGTTCCCACTGGCAGCGCCGGGAGCGGGAGGTACCAAACAG > 1:2951216/1‑72 CCGCCAGTTCCCACTGGCAGCTCCGCCGCCAGTTCCCACTGGCAGCGCTGGCGCAGGAAGTTACAAAACAGC < 1:6512663/72‑1 CCGCCAGTTCCCACGGGCAGCTCCGCCGCCAGTTCCCACTGGCAGCGCTGGCGCAGGAAGTTACCAAACAGC < 1:7257770/72‑1 CGCCAGTTCCCACTGGCAGCTCCGCCTCCAGTTCCCACTGGCAGCGCTGGCGCAGGAAGTTACCAAACAGCG < 2:8012292/72‑1 CGCCAGTTCCCACTGGCAGCTCCGCCGCCAGTTCCCACTGGCAGCGCTGGCGCCGGAAGGTACCAAACAGag > 2:8700646/1‑70 CGCCAGTTCCCACTGGCAGCTCCGCCGCCAGTTCCCACTGGCAGCGCTGGCGCAGGAAGTTACCAAACAGCG < 2:6324433/72‑1 CGCCAGTTCCCACTGGCAGCTCCGCCGCCAGTTCCCACTGGCAGCGCTGGCCCAGGGAGTTAACAAACAGCG > 2:6791811/1‑72 CGCCAGTCCCCACTGGCAGCTCCGCCGCCAGTTCCCACTGGCAGCGCTGGCGCAGGAAGTTACCAAACAGCG < 2:2506688/72‑1 CCAGTTCCCACTGGCAGCTCGGCCGCCAGTTCCCACTGGCAGCGCTGGCGCAGGAAGTTACCAAACAGCGGG < 1:3178645/72‑1 CCAGTTCCCACTGGCAGCTCCGCCGCCAGTTCCCACTGGCAGCGCTTGCGCAGGGAGGTACCAAACAGCCGG > 1:1614100/1‑72 CCAGTTCCCACTGGCAGCTCCGCCGCCAGTTCCCACTGGCAGCGCTGGCGCCGGGAAGTAACAAACAGCGGG > 2:7762051/1‑72 CCAGTTCCCACTGGCAGCTCCGCCGCCAGTTCCCACTGGCAGCGCTGGCGCCGGAAGTTACCAAACAGCGGG > 1:328192/1‑72 CCAGTTCCCACTGGCAGCTCCGCCGCCAGTTCCCACTGGCAGCGCTGGCGCAGGAAGTTACCAAACAGCCGG > 2:6588144/1‑72 CAGTTCCCACTGGCAGCTCCGCCGCCAGTTCCCACTGGCAGCGCTGGCGCAGGAAGTTACCAAACAGCGGGT < 2:2358533/72‑1 CAGTCCCCACTGGCAGCTCCGCCGCCAGTTCCCACTGGCAGCGCTGGCGCAGGAAGTTACCAAACAGCGGGT < 2:7572653/72‑1 CAGTCCCCACTGGCAGCTCCGCCGCCAGTTCCCACTGGCAGCGCTGGCGCAGGAAGTTACCAAACAGCGGGT < 2:3416667/72‑1 AGTTCCCACTGGCAGCTCCGCCGCCAGTTCCCACTGGCAGCGCTGGCGCAGGAAGTTACCAAACAGCGGGTG < 2:6592820/72‑1 gtcCCCACTGGCGGGTCCGCCGCCAGTTCCCACTGGCAGCGCTGGCGCAGGAAGTTACCAAACAGCGGGTGA < 1:6396353/69‑1 GTTCCCACTGGCAGCTCCGCCGCCAGTTCCCCCCGGCAGCGCCGGCGCAGGAANGTACCAAACAGCCGGTGA > 1:3367621/1‑72 GTTCCCACTGGCAGCTCCGCCGCCAGTTCCCACTGGCAGCGCTGGCGCAGGAAGTTACCAAACAGCGGGTGA < 1:322107/72‑1 tcCCCACTGGCCGCTCCGCCGCCAGTTCCCACTGGCAGCGCTGGCGCAGGAAGTTACCAAACAGCGGGTGAT < 2:2513670/70‑1 TTCCCACTGGCAGCTCCGCCGCCAGTTCCCACTGGCAGCGCTGGCGCAGGAAGTTACCAAACAGCGGGTGAT < 1:50696/72‑1 TTCCCACTGGCAGCTCCGCCGCCAGTTCCCACTGGCAGCGCTGGCGCAGGAAGTTACCAAACAGCGGGTGAT < 2:5457156/72‑1 cCCCGCTGCCAGCTCCGCCGCCAGTTCCCACTGGCAGCGCTGGCGCAGGAAGTTACCAAACAGCGGGTGATA < 2:7163669/71‑1 CCCACTGGCAGCTCCGCCGCCAGTTCCCACTGGCAGCGCTGGCGCAGGGAGGTACCAAACAGCGGGGGGTAG > 2:5453/1‑72 CCACTGGCAGCTCCGCCGCCAGTTCCCACTGGCAGCGCTGGCGCAGGAAGTTACCAAACAGCGGGTGATAGC < 1:7315407/72‑1 CCACTGGCAGCTCCGCCGCCAGTTCCCACTGGCAGCGCTGGCGCAGGAAGTTACCAAACAGCGGGTGATAGC < 1:8531115/72‑1 CCACTGGCAGCTCCGCCGCCAGTTCCCACTGGCAGCGCTGGCGCAGGAAGTTACCAAACAGCGGGTGATAGC < 1:7058520/72‑1 CCACGGGCAGCTCCGCCGCCAGTTCCCACTGGCAGCGCTGGCGCAGGAAGTTACCAAACAGCGGGTGATAGC < 1:5685321/72‑1 CCACGGGCACCTCCGCCGCCAGTTCCCACTGGCAGCGCTGGCGCAGGAAGTTACCAAACAGCGGGTGATAGC < 2:2740281/72‑1 CACTGGCAGCTCCGCCGCCAGTTCCCACTGGCAGCGCTGGCGCAGGAAGTTACCAAACAGCGGGTGATAGCA < 2:4268221/72‑1 CACTGGCAGCTCCGCCGCCAGTTCCCACTGGCAGCGCTGGCGCAGGAAGTTACCAAACAGCGGGTGATAGCA < 1:4733469/72‑1 CACTGGCAGCTCCGCCGCCAGTTCCCACTGGCAGCGCTGGCGCAGGAAGTTACCAAACAGCGGGTGACAGCA > 2:6866945/1‑72 CTGGCAGCTCCGCCGCCAGTTCCCACTGGCAGCGCTGGCGCAGGAAGTTACCAAACAGCGGGTGATAGCAGA < 1:4962477/72‑1 CTGGCAGCTCCGCCGCCAGTTCCCACTGGCAGCGCTGGCGCAGGAAGTTACCAAACAGCGGGTGATAGCAGA < 2:8088637/72‑1 CTGGCAGCTCCGCCGCCAGTTCCCACTGGCAGCGCTGGCGCAGGAAGTTACCAAACAGCGGGTGATAGCAGA < 1:2225969/72‑1 gGGCACCTCCGCCGCCAGTTCCCACTGGCAGCGCTGGCGCAGGAAGTTACCAAACAGCGGGTGATAGCAGAA < 1:15980/71‑1 TGGCAGCTCCGCCGCCAGTTCCCACTGGCAGCGCTGGCGCAGGAAGTTACCAAACAGCGGGTGATAGCAGAA < 2:296183/72‑1 TGGCAGCTCCGCCGCCAGTTCCCACTGGCAGCGCTGGCGCAGGAAGTTACCAAACAGCGGGGGATAGCAGAA > 2:6959148/1‑72 TGGCAGCTCCGCCGCCAGTTCCCACTGGCAGCGCTGGCGCAGGAAGTTACCAAACAGCGGGGGAGANGAGAA > 2:3381110/1‑72 TGGCAGCTCCGCCGCCAGTTCCCACTGGCAGCGCGGGCGCAGGAAGTTAGCAAACAACGGGTGATAGCAGAA > 2:6411712/1‑72 gtCAGCTCCGCCGCCAGTTCCCACTGGCAGCGCTGGCGCAGGAAGTTACCAAACAGCGGGGGAGAGCAGAAC > 1:6698578/3‑72 GGCAGCTCCGCCGCCAGTTCCCACTGGCAGCGCTGGCGCAGGAAGTTACCAAACAGCGGGTGATAGCAGAAC > 1:8498379/1‑72 GGCAGCTCCGCCGCCAGTTCCCACTGGCAGCGCTGGCGCAGGAAGTTACCAAACAGCGGGTGATAGCAGAAC > 2:310685/1‑72 GCAGCTCCGCCGCCAGTTCCCACTGGCAGCGCTGGCGCAGGAAGTTACCAAACAGCGGGTGATAGCAGAACC < 2:5304686/72‑1 GCAGCTCCGCCGCCAGTTCCCACTGGCAGCGCTGGCGCAGGAAGTTACCAAACAGCGGGTGATAGCAGAACC > 1:8354132/1‑72 GCAGCCCCCCCGCCAGTTCCCACTGGCAGCGCTGGCGCAGGAAGTTACCAAACAGCGGGTGATAGCAGAACC < 2:2025204/72‑1 CAGCTCCGCCGCCAGTTCCCACTGGCAGCGCTGGCGCAGGAAGTTACCAAACAGCGGGTGATAGCCGAACCA > 2:2640803/1‑72 CAGCTCCGCCGCCAGTTCCCACTGGCAGCGCTGGCGCAGGAAGTTACCAAACAGCGGGTGATAGCAGAACCA < 1:1171496/72‑1 AGCTCCGCCGCCAGTTCCCACTGGCAGCGCTGGCGCAGGAAGTTACCAAACAGCGGGTGATAGCAGAACCAC > 1:4830945/1‑72 AGCTCCGCCGCCAGTTCCCACTGGCAGCGCTGGCGCAGGAAGTTACCAAACAGCGGGTGATAGCAGAACCAC > 1:2125989/1‑72 AGCTCCGCCGCCAGTTCCCACTGGCAGCGCTGGCGCAGGAAGTTACCAAACAGCGGGTGATAGCAGAACCAC > 1:1963636/1‑72 AGCTCCGCCGCCAGTTCCCACGGGCAGCGCTGGCGCAGGAAGTTACC‑AACAGCGGGTGATAGCAGAACCACT < 1:530078/72‑1 GCTCCGCCGCCAGTTCCCACTGGCAGCGATGGCGCAGGAAGTTACCAAACAGCGGGTGATAGCAGAACCACT < 1:7107255/72‑1 CTCCGCCGCCATTTCCCACTGGCAGCGCTGGCGCAGGAAGTTACCAAACAGCGGGTGATAGCAGAACCACTC < 2:6950252/72‑1 CTCCGCCGCCAGTTCCCACTGGCAGCGCTGGCGCAGGAAGTTACCAAACAGCGGGTGATAGCAGAACCACTC < 2:5870953/72‑1 ATCCCTGGGCCATCCAGCTTTCTGCGGCGGCACGGTGGATTTCCGGCAGCTCCGCCGCCAGTTCCCACTGGCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_012967/3482750‑3482676‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcagcTCCGCCGCCAGTTCCCACTGGCAGCGCTGGCGCAGGAAGTTACCAAACAGCGGGTGATAGCAGAACCACTC < NC_012967/3482700‑3482630 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |