| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_012967 | = 3894995 | NA (NA) | 268 (1.090) | 113/140 | 0.1 | 100% | intergenic (+25/‑163) | ECB_RS25215/rbsD | IS3‑like element IS150 family transposase/D‑ribose pyranase |
| ? | NC_012967 | 3899627 = | 0 (0.000) | coding (527/930 nt) | rbsK | ribokinase | |||||
Only 100 of 288 total aligned reads displayed.
GACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACa‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_012967/3894925‑3894995‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AACTGCTGGCGCTGGTGGACATTATTACGCCAAACGAAACGGAAGCAGAAAAGCTCACCGGTATTCGTGTTG > NC_012967/3899627‑3899698 gcCTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA > 1:742276/3‑72GACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGTGTCAGTACA > 1:572604/1‑72GACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA > 1:5051268/1‑72GACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA > 2:618259/1‑72GACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA > 2:5844052/1‑72GACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA > 2:5060864/1‑72GACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTAGGGTCAGTACA < 2:233658/72‑1GACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTGTAACTGTCCAACTTTTTGGGGTCAGTACA < 2:4361947/72‑1 ACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAA > 2:8443334/1‑72 ACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAA > 1:1470229/1‑72 ACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAA < 2:2018803/72‑1 ACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAA > 2:6860192/1‑72 ACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAA > 2:2491310/1‑72 ACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAA < 2:1125506/72‑1 ACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAA > 1:4669854/1‑72 CTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAC < 1:4271506/72‑1 CTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAC > 2:3781922/1‑72 CTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAC > 2:5695670/1‑72 CTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAC < 1:8662700/72‑1 TCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAACT > 1:1210421/1‑72 CCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAACTG < 1:8704048/72‑1 ATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAACTGCTG < 2:2997842/72‑1 TTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAACTGCTGG > 2:1181155/1‑72 TGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAACTGCTGGC > 2:7914934/1‑72 AATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAACTGCTGGCGC < 1:3979466/72‑1 ATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAACTGCTGGCGCT > 1:4154879/1‑72 TATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTTGGGTCAGTACAACTGATGGCGCTG > 1:7873778/1‑72 ATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAACTGCTGGCGCTGG < 2:7652400/72‑1 CGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAACTGCTGGCGCTGGTG < 1:3180355/72‑1 CGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAACTGCTGGCGCTGGTG < 1:6152983/72‑1 GGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAACTGCTGGCGCTGGTGG < 2:7735281/72‑1 AATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAACTGCTGGCGCTGGTGGAC < 1:7051022/72‑1 ATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAACTGCTGGCGCTGGTGGACA > 2:8756462/1‑72 ATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAACTGCTGGCGCTGGTGGACA > 1:1566365/1‑72 CAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAACTGCTGGCGCTGGTGGACATT > 2:644930/1‑72 CAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAACTGCTGGCGCTGGTGGACATT > 2:8078917/1‑72 AGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAACTGCTGGCGCTGGTGGACATTA > 1:5452863/1‑72 CCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAACTGCTGGCGCTGGTGGACATTATTA < 1:1605823/72‑1 CTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAACTGCTGGCGCTGGTGGACATTATTAC > 1:5266827/1‑72 TATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAACTGCTGGCGCTGGTGGACATTATTACG > 1:6573561/1‑72 TATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAACTGCTGGCGCTGGTGGACATTATTACG > 2:2135627/1‑72 ATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAACTGCTGGCGCTGGTGGACATTATTACGC > 2:1585636/1‑72 ATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAACTGCTGGCGCTGGTGGACATTATTACGCCA < 2:4492454/72‑1 TGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAACTGCTGGCGCTGGTGGACATTATTACGCCAA > 2:1900552/1‑72 TGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAACTGCTGGCGCTGGTGGACATTATTACGCCAA > 1:6862854/1‑72 TGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAACTGCTGGCGCTGGTGGACATTATTACGCCAA < 1:7201829/72‑1 TGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAACTGCTGGCGCTGGTGGACATTATTACGCCAA > 1:3450064/1‑72 GCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAACTGCTGGCGCTGGTGGACANTATTACGCCAAA > 1:951415/1‑72 GCCTAGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAACTGCTGGCGCTGGTGGACATTATTACGCCAAA > 2:5434314/1‑72 CCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAACTGCTGGCGCTGGTGGACATTATTACGCCAAAC < 1:8318082/72‑1 CCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAACTGCTGGCGCTGGTGGACATTATTACGCCAAAC < 2:3115611/72‑1 CCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAACTGCTGGCGCTGGTGGACATTATTACGCCAAAC < 2:244005/72‑1 CTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAACTGCTGGCGCTGGTGGACATTATTACGCCAAACG < 1:8435547/72‑1 GTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAACTGCTGGCGCTGGTGGACATTATTACGCCAAACGAAA > 2:5286437/1‑72 GTTTAACTGTCCAACTTTTTGGGGTCAGTACAACTGCTGGCGCTGGTGGACATTATTACGCCAAACGAAACG > 1:7707351/1‑72 GTTTAACTGTCCAACTTTTTGGGGTCAGTACAACTGCTGGCGCTGGTGGACATTATTACGCCAAACGAAACG > 1:6728221/1‑72 TTTAACTGTCCAACTTTTTGGGGTCAGTACAACTGCTGGCGCTGGTGGACATTATTACGCCAAACGAAACGG > 1:229818/1‑72 TTAACTGTCCAACTTTTTGGGGTCAGTACAACTGCTGGCGCTGGTGGACATTATTACGCCAAACGAAACGGA < 1:1394841/72‑1 ACTGTCCAACTTTTTGGGGTCAGTACAACTGCTGGCGCTGGTGGACATTATTACGCCAAACGAAACGGAAGC > 2:2903988/1‑72 ACTGTCCAACTTTTTGGGGTCAGTACAACTGCTGGCGCTGGTGGACATTATTACGCCAAACGAAACGGAAGC > 2:1789895/1‑72 CTGTCCAACTTTTTGGGGTCAGTACAACTGCTGGCGCTGGTGGACATTATTACGCCAAACGAAACGGAAGCA < 1:2655902/72‑1 TGTCCAACTTTTTGGGGTCAGTACAACTGCTGGCGCTGGTGGACATTATTACTCCAAACGAAACGGAAGCAG > 1:8125334/1‑72 TGTCCAACTTTTTGGGGTCAGTACAACTGCTGGCGCTGGTGGACATTATTACGCCAAACGAAACGGAAGCAG > 1:5708069/1‑72 GTCCAACTTTTTGGGGTCAGTACAACTGCTGGCGCTGGTGGACATTATTACGCCAAACGAAACGGAAGCAGA > 1:5003972/1‑72 GTCCAACTTTTTGGGGTCAGTACAACTGCTGGCGCTGGTGGACATTATTACGCCAAACGAAACGGAAGCAGA > 2:6268356/1‑72 GTCCAACTTTTTGGGGTCAGTACAACTGCTGGCGCTGGTGGACATTATTACGCCAAACGAAACGGAAGCAGA > 1:1900575/1‑72 TCCAACTTTTTGGGGTCAGTACNACTGCTGGCGCTGGTGGACATTACTACGCCAAACGAAACGGAAGCAGAA < 1:2440848/72‑1 CAACTTTTTGGGGTCAGTACAACTGCTGGCGCTGGTGGACATTATTACGCCAAACGAAACGGAAGCAGAAAA > 2:5122764/1‑72 CAACTTTTTGGGGTCAGTACAACTGCTGGCGCTGGTGGACATTATTACGCCAAACGAAACGGAAGCAGAAAA > 2:8299704/1‑72 AACTTTTTGGGGTCAGTACAACTGCTGGCGCTGGTGGACATTATTACGCCAAACGAAACGGAAGCAGAAAAG > 2:2728990/1‑72 AACTTTTTGGGGTCAGTACAACTGCTGGCGCTGGTGGACATTATTACGCCAAACGAAACGGAAGCAGAAAAG > 1:2877677/1‑72 AACTTTTTGGGGTCAGTACAACTGCTGGCGCTGGTGGACATTATTACGCCAAACGAAACGGAAGCAGAAAAG > 1:6086528/1‑72 ACTTTTTGGGGTCAGTACAACTGCTGGCGCTGGTGGACATTATTACGCCAAACGAAACGGAAGCAGAAAAGC < 2:1470229/72‑1 CTTTTTGGGGTCAGTACANCTGCTGGCGCTGGTGGACATTATTACGCCAAACGAAACGGAAGCAGAAAAGCT < 2:704264/72‑1 CTTTTTGGGGTCAGTACAACTGCTGGNGCTGGTGGACATTATTACGCCAAACGAAACGGAAGCAGAAAAGCT < 1:595564/72‑1 CTTTTTGGGGTCAGTACAACTGCTGGCGCTGGTGGACATTATTACGCCAAACGAAACGGAAGCAGAAAAGCT < 1:1789895/72‑1 nTTTTGGGGTCAGTACAACTGCTGGCGCTGGTGGACATTATTACGCCAAACGAAACGGAAGCAGAAAAGCTC < 1:1022695/71‑1 TTTTTGGGGTCAGTACAACTGCTGGCGCTGGTTGACATTATTACGCCAAACGAAACGTAAGCAGAAAAGCTC < 2:2569985/72‑1 TTTTTGGGGTCAGTACAACTGCTGGCGCTGGTGGACATTATTACGCCAAACGAAACGGAAGCAGAAAAGCTC < 1:4444133/72‑1 TTTTTGGGGTCAGTACAACTGCTGGCGCTGGTGGACATTATTACGCCAAACGAAACGGAAGCAGAAAAGCTC < 1:2010841/72‑1 TTTTGGGGTCAGTACAACTGCTGGCGCTGGTGGACATTATTACGCCAAACGAAACGGAAGCAGAAAAGCTCA > 1:8038764/1‑72 TTNGGGTCAGTACAACTGCTGGCGCTGGTGGACATTATTACGCCAAACGAAACGGAAGCAGAAAAGCTCACC < 2:723863/72‑1 TTGGGGTCAGTACAACTGCTGGCGCTGGTGGACATTATTACGCCAAACGAAACGGAAGCAGAAAAGCTCACC > 1:7516520/1‑72 TGGGGTCAGTACAACTGCTGGCGCTGGTGGACATTATTACGCCAAACGAAACGGAAGCAGAAAAGCTCACCG > 1:2045865/1‑72 GGGGTCAGTACAACTGCTGGCGCTGGTGGACATTATTACGCCAAACGAAACGGAAGCAGAAAAGCTCACCGG > 2:3485440/1‑72 GGGTCAGTACAACTGCTGGCGCTGGTGGACATTATTACGCCAAACGAAACGGAAGCAGAAAAGCTCACCGGT > 2:8678601/1‑72 GGGTCAGTACAACTGCTGGCGCTGGTGGACATTATTACGCCAAACGAAACGGAAGCAGAAAAGCTCACCGGT < 1:4708316/72‑1 GGGTCAGTACAACTGCTGGCGCTGGTGGACATTATTACGCCAAACGAAACGGAAGCAGAAAAGCTCACCGGT > 2:7824174/1‑72 GGTCAGTACAACTGCTGGCGCTGGTGGACATTATTACNCCAAACGAAACGGAAGCNNNAAAGCTCACCGGTA > 1:6216381/1‑72 GTCAGTACAACTGCTGGCGCTGGTGGACATTATTACGCCAAACGAAACGGAAGCAGAAAAGCTCACCGGTAT > 1:7296007/1‑72 TCAGTACAACTGCTGGCGCTGGTGGACATTATTACGCCAAACGAAACGGAAGCAGAAAAGCTCACCGGTATT < 2:4245391/72‑1 TCAGTACAACTGCTGGCGCTGGTGGACATTATTACGCCAAACGAAACGGAAGCAGAAAAGCTCACCGGTATT < 2:4707904/72‑1 atTACAACTGCTGGCGCTGGTGGACATTATTACGCCAAACGAAACGGAAGCAGAAAAGCTCACCGGTATTCG > 2:7161348/3‑72 AGTACAACTGCTGGCGCTGGTGGACATTATTACGCCAAACGAAACGGAAGCAGAAAAGCTCACCGGTATTCG > 1:5769768/1‑72 AGTACAACTGCTGGCGCTGGTGGACATTATTACGCCAAACGAAACGGAAGCAGAAAAGCTCACCGGNATTCG > 2:399285/1‑72 TACAACTGCTGGCGCTGGTGGACATTATTACGCCAAACGAAACGGAAGCAGAAAAGCTCACCGGTATTCGTG < 1:5867939/72‑1 ACAACTGCTGGCGCTGGTGGACATTATTACGCCAAACGAAACGGAAGCAGAAAAGCTCACCGGTATTCGTGT > 2:4018058/1‑72 CAACTGCTGGCGCTGGTGGACATTATTACGCCAAACGAAACGGAAGCAGAAAAGCTCACCGGTATTCGTGTT < 1:3671141/72‑1 AACTGCTGGCGCTGGTGGACATTATTACGCCAAACGAAACGGAAGCAGAAAAGCTCACCGGTATTCGTGTTG < 1:3854986/72‑1 AACTGCTGGCGCTGGTGGACATTATTACGCCAAACGAAAAGGAAGCAGAAAAGCTCACCGGTATTCGTGTTG < 1:6354463/72‑1 GACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACa‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_012967/3894925‑3894995‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AACTGCTGGCGCTGGTGGACATTATTACGCCAAACGAAACGGAAGCAGAAAAGCTCACCGGTATTCGTGTTG > NC_012967/3899627‑3899698 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |