New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_012967	= 3894995	NA (NA)	268 (1.090)	113/140	0.1	100%	intergenic (+25/‑163)	ECB_RS25215/rbsD	IS3‑like element IS150 family transposase/D‑ribose pyranase
	?	NC_012967	3899627 =	0 (0.000)					coding (527/930 nt)	rbsK	ribokinase

TCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGACGCCTCCTTTCTTCATAAGGGGGCGTTTTTGTTTTCATGGTTAATCACCATGTAAAACGTTTCGAG  >  NC_012967/3894928‑3895064                                                                    |                                                                      tCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAgta                                                                   <  1:5838082/72‑3 (MQ=14) tCCAATTGAATATCGGAATCAGACATATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGAc                                                                   <  1:4337789/72‑1 (MQ=21)                                                                  tACAGACGCCTCCTTTCTTCATAAGGGGGCGTTTTTGTTTTCATGGTTAATCACCATGTAAAACGTTTCGAg  >  2:6059133/1‑72 (MQ=255)                                                                    |                                                                      TCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGACGCCTCCTTTCTTCATAAGGGGGCGTTTTTGTTTTCATGGTTAATCACCATGTAAAACGTTTCGAG  >  NC_012967/3894928‑3895064

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.