| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_012967 | = 602385 | 318 (1.270) | 3 (0.010) | 3/118 | 18.2 | 1.3% | coding (523/816 nt) | fepC | iron‑enterobactin ABC transporter ATP‑binding protein |
| ? | NC_012967 | 1546703 = | 204 (0.980) | coding (2439/2784 nt) | pqqL | insulinase family protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 254 total aligned reads displayed.
TCATTCGCTAACGTTAACAGTTCATCATGTCGTTCTGGTTGACAAGTAAAAGCCAGCAAATGACTGATATCTTTGGCCTGAGGATCAACCGAGAGGCGAGAAGAAACGCTGTATGCTCCAGATGCCTGTTCACGAATATTAAC > NC_012967/1546632‑1546774 | tCATTCGCTAACGTTAACAGTTCATCATGTCGTTCTGGTTGACAAGTAAAAGCCAGCAAATGACTGATATCt < 1:1529918/72‑1 (MQ=255) cATTCGCTAACGTTAACAGTTCATCATGTCGTTCTGGTTGACAAGTAAAAGCCAGCAAATGACTGATATCtt < 2:7772330/72‑1 (MQ=255) aTTCGCTAACGTTAACAGTTCATCATGTCGTTCTGGTTGACAAGTAAAAGCCAGCAAATGACTGATATCttt > 1:788129/1‑72 (MQ=255) ttCGCTAACGTTAACAGTTCATCATGTCGTTCTGGTTGACAAGTAAAAGCCAGCAAATGACTGATATCTTTg > 1:2397724/1‑72 (MQ=255) tagCTAACGTTAACAGTTCATCATGTCGTTCTGGTTGACAAGTAAAAGCCAGCAAATGACTGATATCTTTgg > 1:1280204/3‑72 (MQ=255) cGCTAACGTTAACAGTTCATCATGTNGTTCTGGTTGACAAGTAAAAGCCAGCAAATGACTGATATCTTTGGc > 1:976620/1‑72 (MQ=255) cGCTAACGTTAACAGTTCATCATGTCGTTCTGGTTGACAAGTAAAAGCCAGCAAATGACTGATATCTTTGGc > 1:3504316/1‑72 (MQ=255) cTAACGTTAACAGTTCATCATGTCGTTCTGGTTGACAAGTAAAAGCCAGCAAATGACTGATATCTTTGGccc < 1:5524545/72‑2 (MQ=255) cTAACGTTAACAGTTCATCATGTCGTTCTGGTTGACAAGTAAAAGCCAGCAAATGACTGATATCTTTGGCCt > 2:8538139/1‑72 (MQ=255) cTAACGTTAACAGTTCATCATGTCGTTCTGGTTGACAAGTAAAAGCCAGCAAATGACTGATATCTTTGGCCt < 1:4562887/72‑1 (MQ=255) cTAACGTTAACAGTTCATCATGTCGTTCTGGTTGACAAGTAAAAGCCAGCAAATGACTGATATCTTTGGCCt > 1:6771296/1‑72 (MQ=255) cTAACGTTAACAGTTCATCATGTCGTTCTGGTTGACAAGTAAAAGCCAGCAAATGACTGATATCTTTGGCCt < 1:5939164/72‑1 (MQ=255) tAACGTTAACAGTTCATCATGTCGTTCTGGTTGACAAGTAAAAGCCAGCAAATGACTGATATCTTTGGCCTg < 2:1216443/72‑1 (MQ=255) aaCGTTAACAGTTCATCATGTCGTTCTGGTTGACAAGTAAAAGCCAGCAAATGACTGATATCTTTGGCCTGa > 2:5375005/1‑72 (MQ=255) aaCGTTAACAGTTCATCATGTCGTTCTGGTTGACAAGTAAAAGCCAGCAAATGACTGATATCTTTGGCCTGa > 1:1694499/1‑72 (MQ=255) aCGTTAACAGTTCATCATGTCGTTCTGGTTGACAAGTAAAAGCCAGCAAATGACTGATATCTTTGGCCTGAg > 1:4740794/1‑72 (MQ=255) cGTTAACAGTTCATCATGTCGTTCTGGTTGACAAGTAAAAGCCAGCAAATGACTGATATCTTTGGCCTGAgg > 1:6457326/1‑72 (MQ=255) cGTTAACAGTTCATCATGTCGTTCTGGTTGACAAGTAAAAGCCAGCAAATGACTGATATCTTTGGCCTGAgg < 1:7373706/72‑1 (MQ=255) gTTAACAGTTCATCATGTCGTTCTGGTTGACAAGTAAAAGCCAGCAAATGACTGATATCTTTGGCCtgatga > 1:7489093/1‑72 (MQ=255) gTTAACAGTTCATCATGTCGTTCTGGTTGACAAGTAAAAGCCAGCAAATGACTGATATCTTTGGCCTGAGGa > 1:4017919/1‑72 (MQ=255) gTTAACAGTTCATCATGTCGTTCTGGTTGACAAGTAAAAGCCAGCAAATGACTGATATCTTTGGCCTGAGGa < 2:5521417/72‑1 (MQ=255) gTTAACAGTTCATCATGTCGTTCTGGTTGACAAGTAAAAGCCAGCAAATGACTGATATCTTTGGCCTGAGGa > 2:1396309/1‑72 (MQ=255) ttAACAGTTCATCATGTCGTTCTGGTTGACAAGTAAAAGCCAGCAAATGACTGATATCTTTGGCCTGAGGAt < 1:147599/72‑1 (MQ=255) tAACAGTTCATCATGTCGTTCTGGTTGACAAGTAAAAGCCAGCAAATGACTGATATCTTTGGCCTGAGGATc > 1:3790948/1‑72 (MQ=255) tAACAGTTCATCATGTCGTTCTGGTTGACAAGTAAAAGCCAGCAAATGACTGATATCTTTGGCCTGAGGATc > 1:1181591/1‑72 (MQ=255) tAACAGTTCATCATGTCGTTCTGGTTGACAAGTAAAAGCCAGCAAATGACTGATATCTTTGGCCTGAGGATc < 2:4164398/72‑1 (MQ=255) aCAGTTCATCATGTCGTTCTGGTTGACAAGTAAAAGCCAGCAAATGACTGATATCTTTGGCCTGAGGATCaa < 1:2430889/72‑1 (MQ=255) aCAGTTCATCATGTCGTTCTGGTTGACAAGTAAAAGCCAGCAAATGACTGATATCTTTGGCCTGAGGATCaa > 1:3767946/1‑72 (MQ=255) cAGTTCATCATGTCGTTCTGGTTGACAAGTAAAAGCCAGCAAATGACTGATATCTTTGGCCTGAGGATCAAc < 2:2770555/72‑1 (MQ=255) cAGTTCATCATGTCGTTCTGGTTGACAAGTAAAAGCCAGCAAATGACTGATATCTTTGGCCTGAGGATCAAc > 2:1782113/1‑72 (MQ=255) aGTTCGTCATGTCGTTCTGGTTGACAAGTAAAAGCCAGCAAATGACTGATATCTTTGGCCTGAGGATCAAcc < 2:1707970/72‑1 (MQ=255) aGTTCATCATGTCGTTCTGGTTGACAAGTAAAAGCCAGCAAATGACTGATATCTTTGGCCTGAGGATCAAcc < 1:4942847/72‑1 (MQ=255) aGTTCATCATGTCGTTCTGGTTGACAAGTAAAAGCCAGCAAATGACTGATATCTTTGGCCTGAGGATCAAcc < 2:2335337/72‑1 (MQ=255) aGTTCATCATGTCGTTCTGGTTGACAAGTAAAAGCCAGCAAATGACTGATATCTTTGGCCTGAGGATCAAcc > 2:6596129/1‑72 (MQ=255) gTTCATCATGTCGTTCTGGTTGACAAGTAAAAGCCAGCAAATGACTGATATCTTTGGCCTGAGGATCAACCg < 2:2946564/72‑1 (MQ=255) gTTCATCATGTCGTTCTGGTTGACAAGTAAAAGCCAGCAAATGACTGATATCTTTGGCCTGAGGATCAACCg < 2:7850278/72‑1 (MQ=255) gTTCATCATGTCGTTCTGGTTGACAAGTAAAAGCCAGCAAATGACTGATATCTTTGGCCTGAGGATCAACCg > 2:3790409/1‑72 (MQ=255) ttCATCATGTCGTTCTGGTTGACAAGTAAAAGCCAGCAAATGACTGATATCTTTGGCCTGAGGATCAACCga > 1:2070703/1‑72 (MQ=255) catcatGTCGTTCTGGTTGACAAGTAAAAGCCAGCAAATGACTGATATCTTTGGCCTGAGGATCAACCgaga < 2:7631661/72‑1 (MQ=255) atcatGTCGTTCTGGTTGACAAGTAAAAGCCAGCAAATGACTGATATCTTTGGCCTGAGGATCAACCGagag < 2:2583688/72‑1 (MQ=255) atcatGTCGTTCTGGTTGACAAGTAAAAGCCAGCAAATGACTGATATCTTTGGCCTGAGGATCAACCGagag > 1:4684228/1‑72 (MQ=255) catGTCTTTCTGGTTGACAAGTAAAAGCCAGCAAATGACTGATATCTTTGGCCTGAGGATCAACCGAGAGGc < 2:6179341/72‑1 (MQ=255) atGTCGTTCTGGTTGACAAGTAAAAGCCAGCAAATGACTGATATCTTTGGCCTGAGGATCAACCGAGAGGCg > 1:2894970/1‑72 (MQ=255) tGTCGTTCTGGTTGACAAGTAAAAGCCAGCAAATGACTGATATCTTTGGCCTGAGGATCAACCGAGAGGCga > 1:2170121/1‑72 (MQ=255) gTCGTTCTGGTTGACAAGTAAAAGCCAGCAAATGACTGATATCTTTGGCCTGAGGATCAACCGAGAGGCgag > 2:8617999/1‑72 (MQ=255) tCGTTCTGTTTGACAAGTAAAAGCCAGCAAATGACTGATATCTTTGGCCTGAGGATCAACCGAGAGGCgaga < 2:894943/72‑1 (MQ=255) tCGTTCTGGTTGACAAGTAAAAGCCAGCANATGACTGATATCTTTGGCCTGAGGATCAACCGAGAGGCgaga > 2:731208/1‑72 (MQ=255) gTTCTGGTTGACAAGTAAAAGCCAGCAAATGACTGATATCTTTGGCCTTAGGANCAACCGAGAGGCGagaag > 1:3414496/1‑72 (MQ=255) gTTCTGGTTGACAAGTAAAAGCCAGCAAATGACTGATATCTTTGGCCTGAGGATCAACCGAGAGGCGagaag > 1:1091720/1‑72 (MQ=255) ttCTGGTTGACAAGTAAAAGCCAGCAAATGACTGATATCTTTGGCCTGAGGATCAACCGAGAGGCGagaaga < 1:6137884/72‑1 (MQ=255) ttCTGGTTGACAAGTAAAAGCCAGCAAATGACTGATATCTTTGGCCTGAGGATCAACCGAGAGGCGagaaga < 2:8599076/72‑1 (MQ=255) tCTGGTTGACAAGTAAAAGCCAGCAAATGACTGATATCTTTGGCCTGAGGATCAACCGAGAGGCGAgaagaa > 1:1551364/1‑72 (MQ=255) tCTGGTTGACAAGTAAAAGCCAGCAAATGACTGATATCTTTGGCCTGAGGATCAACCGAGAGGCGAgaagaa < 2:3890625/72‑1 (MQ=255) tCTGGTTGACAAGTAAAAGCCAGCAAATGACTGATATCTTTGGCCTGAGGATCAACCGAGAGGCGAgaagaa < 1:6678804/72‑1 (MQ=255) tGGTTGACAAGTAAAAGCCAGCAAATGACTGATATCTTTGGCCTGAGGATCAACCGAGAGGCGAGAAGAAAc > 2:7455059/1‑72 (MQ=255) gACAAGTAAAAGCCAGCAAATGACTGATATCTTTGGCCTGAGGATCAACCGAGATGCGAGAAGAAACGCTGt < 2:7977100/72‑1 (MQ=255) aCAAGTAAAAGCCAGCAAATGACTGATATCTTTGGCCTGAGGATCAACCGAGAGGCGAGAAGAAACGCTGTa < 1:8659611/72‑1 (MQ=255) cAAGTAAAAGCCAGCAAATGACTGATATCTTTGGCCTGAGGATCAACCGAGAGGCGAGAAGAAACGCTGTAt < 2:3257555/72‑1 (MQ=255) cAAGTAAAAGCCAGCAAATGACTGATATCTTTGGCCTGAGGATCAACCGAGAGGCGAGAAGAAAAGCTGTAt > 2:8027954/1‑72 (MQ=255) aaGTAAAAGCCAGCAAATGACTGATATCTTTGGCCTGAGGATCAACCGAGAGGCGAGAAGAAACGCTGTATg < 2:2003/72‑1 (MQ=255) aaGTAAAAGCCAGCAAATGACTGATATCTTTGGCCTGAGGATCAACCGAGAGGCGAGAAGAAACGCTGTATg < 1:1382856/72‑1 (MQ=255) aaGTAAAAGCCAGCAAATGACTGATATCTTTGGCCTGAGGATCAACCGAGAGGCGAGAAGAAACGCTGTATg > 2:5221006/1‑72 (MQ=255) gTAAAAGCCAGCAAATGACTGATATCTTTGGCCTGAGGATCAACCGAGAGGCGAGAAGAAACGCTGTATGCt > 2:4030665/1‑72 (MQ=255) aaaaGCCAGCAAATGACTGATATCTTTGGCCTGAGGATCAACCGAGAGGCGAGAAGAAACGCTGTATGCTcc < 1:711612/72‑1 (MQ=255) aaaaGCCAGCAAATGACTGATATCTTTGGCCTGAGGATCAACCGAGAGGCGAGAAGAAACGCTGTATGCTcc < 2:2825623/72‑1 (MQ=255) aaaaGCCAGCAAATGACTGATATCTTTGGCCTGAGGATCAACCGAGAGGCGAGAAGAAACGCTGTATGCTcc < 2:4289181/72‑1 (MQ=255) aaaGCCAGCAAATGACTGATATCTTTGGCCTGAGGATCAACCGAGAGGCGAGAAGAAACGCTGTATGCTCCa < 2:8352433/72‑1 (MQ=255) aaaGCCAGCAAATGACTGATATCTTTGGCCTGAGGATCAACCGAGAGGCGAGAAGAAACGCTGTATGCTCCa > 1:367522/1‑72 (MQ=255) aaGCCAGCAAATGACTGATATCTTTGGCCTGAGGATCAACCGAGAGGCGAGAAGAAACGCTGTATGCTCCAg > 1:5317568/1‑72 (MQ=255) aGCCAGCAAATGACTGATATCTTTGGCCTGAGGATCAACCGAGAGGCGAGAAGAAACTCTGTATGCTCCAGa > 1:7330152/1‑72 (MQ=255) gCCAGCAAATGACTGATATCTTTGGCCTGAGGATCAACCGAGAGGCGAGAAGAAACGCTGTATGCTCCAGAt > 1:2922225/1‑72 (MQ=255) ccAGCAAATGACTGATATCTTTGGCCTGAGGATCAACCGAGAGGCGAGAAGAAACGCTGTATGCTCCAGATg < 1:6581455/72‑1 (MQ=255) cAGCAAATGACTGATATCTTTGGCCTGAGGATCAACCGAGAGGCGAGAAGAAACGCTGTATGCTCCAGATGc < 1:4339115/72‑1 (MQ=255) cAGCAAATGACTGATATCTTTGGCCTGAGGATCAACCGAGAGGCGAGAAGAAACGCTGTATGCTCCAGATGc > 2:5651994/1‑72 (MQ=255) cAGCAAATGACTGATATCTTTGGCCTGAGGATCAACCGAGAGGCGACAAGAAACGCTGTATGCTCCAGAGGc > 1:4314915/1‑72 (MQ=255) cAGCAAATGACTGATATCTTTGGCCTGAGGATCAACAGAGAGGCGAGAAGAAACGCTGTATGCTCCAGATGc < 1:4081979/72‑1 (MQ=255) aGCAAATGACTGATATCTTTGGCCTGAGGATCAACCGAGAGGCGAGAAGAAACGCTGTATGCTCCAGATGcc > 1:7523044/1‑72 (MQ=255) aGCAAATGACTGATATCTTTGGCCTGAGGATCAACCGAGAGGCGAGAAGAAACGCTGTATGCTCCAGATGcc > 2:3731143/1‑72 (MQ=255) gCAAATGACTGATATCTTTGGCCTGAGGATCAACCGAGAGGCGAGAAGAAACGCTGTATGCTCCAGATGCCt < 1:6327426/72‑1 (MQ=255) gCAAATGACTGATATCTTTGGCCTGAGGATCAACCGAGAGGCGAGAAGAAACGCTGTATGCTCCAGATGCCt < 2:3632420/72‑1 (MQ=255) aaaTGACTGATATCTTTGGCCTGAGGATCAACCGAGAGGCGAGAAGAAACGCTGTATACTCCAGATGCCTGt > 2:4353685/1‑72 (MQ=255) aaTGACTGATATCTTTGGCCTGAGGATCAACCGAGAGGCGAGAAGAAACGCTGTATGCTCCAGATGCCTGtt > 2:6044663/1‑72 (MQ=255) aTGACTGATATCTTTGGCCTGAGGATCAACCGAGAGGCGAGAAGAAACGCTGTATGCTCCAGATGCCTGTTc > 2:5779428/1‑72 (MQ=255) tGACTGATATCTTTGGCCTGAGGATCAACCGAGAGGCGAGAAGAAACGCTGTATGCTCCAGATGCCTGTTCa < 1:722686/72‑1 (MQ=255) tGACTGATATCTTTGGCCTGAGGATCAACCGAGAGGCGAGAAGAAACGCTGTATGCTCCAGATGCCTGTTCa < 1:5721225/72‑1 (MQ=255) tGACTGATATCTTTGGCCTGAGGATCAACCGAGAGGCGAGAAGAAACGCTGTATGCTCCAGATGCCTGTTCa > 2:4508344/1‑72 (MQ=255) gACTGATATCTTTGGCCTGAGGATCAACCGAGAGGCGAGAAGAAACGCTGTATGCTCCAGATGCCTGTTCAc < 1:8107475/72‑1 (MQ=255) gACTGATATCTTTGGCCTGAGGATCAACCGAGAGGCGAGAAGAAACGCTGTATGCTCCAGATGCCTGTTCAc < 1:3036918/72‑1 (MQ=255) gACTGATATCTTTGGCCCGAGGATCAACCGAGAGGCGAGAAGAAACGCTGTATGCTCCAGATGCCTGTTCAc < 2:3405826/72‑1 (MQ=255) aCTGATATCTTTGGCCTGAGGATCAACCGAGAGGCGAGAAGAAACGCTGTATGCTCCAGATGCCTGTTCACg > 2:8191995/1‑72 (MQ=255) cTGATATCTTTGGCCTGAGGATCAACCGAGAGGCGAGAAGAAACGCTGTATGCTCCAGATGCCTGTTCACGa > 1:4906103/1‑72 (MQ=255) tGATATCTTTGGCCTGAGGATCAACCGAGAGGCGAGAAGAAACGCTGTATGCTCCAGATGCCTGTTCACGaa > 1:5800386/1‑72 (MQ=255) tGATATCTTTGGCCTGAGGATCAACCGAGAGGCGAGAAGAAACGCTGTATGATCCAGATGCCTGTTCACGaa > 2:7258221/1‑72 (MQ=255) gATATCTTTGGCCTGAGGATCAACCGAGAGGCGAGAAGAAACGCTGTATGCTCCAGATGCCTGTTCACGAat > 2:6554065/1‑72 (MQ=255) atatCTTTGGCCTGAGGATCAACCGAGAGGCGAGAAGAAACGCTGTATGCTCCAGATGCCTGTTCACGAata > 2:4742662/1‑72 (MQ=255) atatCTTGGGCCTGAGGATCAACCGAGAGGCGAGAAGAAACGCTGTATGCTCCAGATGCCTGTTCACGAata < 2:1262365/72‑1 (MQ=255) tCTTTGGCCTGAGGATCAACCGAGAGGCGAGAAGAAACGCTGTATGCTCCAGATGCCTGTTCACGAATATTa < 2:8449155/72‑1 (MQ=255) cTTTGGCCTGAGGATCACNCGAGAGGCGAGAAGAAACGCTGTATGCTCCAGATGCCTGTTCACGAATATTaa < 2:701260/72‑1 (MQ=255) cTTTGGCCTGAGGATCAACCGAGAGGCGAGAAGAAACGCTGTATGCTCCAGATGCCTGTTCACGAATATTaa < 1:2668581/72‑1 (MQ=255) tttGGCCTGAGGATCAACCGAGAGGCGAGAAGAAACGCTGTATGCTCCAGATGCCTGTTCACGAATATTAac > 1:8403443/1‑72 (MQ=255) | TCATTCGCTAACGTTAACAGTTCATCATGTCGTTCTGGTTGACAAGTAAAAGCCAGCAAATGACTGATATCTTTGGCCTGAGGATCAACCGAGAGGCGAGAAGAAACGCTGTATGCTCCAGATGCCTGTTCACGAATATTAAC > NC_012967/1546632‑1546774 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |