New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP002094	= 2131338	NA (NA)	9 (0.120) +CGGCTCATGATGGAGGATACAGGGC	7/146	9.2	NA	noncoding (7/73 nt)	LLNZ_t13347	tRNA‑Thr
	?	CP002094	2131656 =	NA (NA)					noncoding (58/73 nt)	LLNZ_t13355	tRNA‑Val
Rejected: Coverage evenness skew score above cutoff.

CACGCGACCCTCTGATTACAAATCAGATGCTCTACCAACTGAGCTAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP002094/2131292‑2131338 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCGAACCGCTGACCCTCTGCTTGTAAGGCAGATGCTCTCCCAGCTGAGCTAA  >  CP002094/2131656‑2131707                                                |||||||||||||||||||||||||                                                     ctgtCGACCCTCTGATTAAAAGTCAGATGCTCTACCAACTGAGCTAACGGCTCATGATGGAGGATACAGGGCTCGAACCTGTGACCCTCTGCTTGTAAG                           <  1:635828/95‑1        CCCTCTGATTAAAAGTCAGATGCTCTACCAACTGAGCTAACGGCTCATGATGGAGGATACAGGGCTCGAACCTGTGACCCTCTGCTTGTAAGGCAGAcg                    >  2:373013/1‑97         CCTCTGATTAAAAGTCAGATGCTCTACCAACTGAGCTAACGGCTCATGATGGAGGATACAGGGCTCGAACCTGTGACCCTCTGCTTGTAAGGCAGACGC                   <  1:373013/99‑1                    aagTCAGATGCTCTACCAACTGAGCTAACGGCTCATGATGGAGGATACAGGGCTCGAACCTGTGACCCTCTGCTTGTAAGGCAGACGCTCTCCCAACTG        <  1:38784/96‑1                    aagTCAGATGCTCTACCAACTGAGCTAACGGCTCATGATGGAGGATACAGGGCTCGAACCTGTGACCCTCTGCTTGTAAGGCAGACGCTCTCCCAACTG        >  2:1285510/4‑99                      gTCAGATGCTCTACCAACTGAGCTAACGGCTCATGATGGAGGATACAGGGCTCGAACCTGTGACCCTCTGCTTGTAAGGCAGACGCTCTCCCAACTGAG      >  1:701386/2‑99                       TCAGATGCTCTACCAACTGAGCTAACGGCTCATGATGGAGGATACAGGGCTCGAACCTGTGACCCTCTGCTTGTAAGGCAGACGCTCTCCCAACTGAGC     <  1:109617/99‑1                       TCAGATGCTCTACCAACTGAGCTAACGGCTCATGATGGAGGATACAGGGCTCGAACCTGTGACCCTCTGCTTGTAAGGCAGACGCTCTCCCAACTGAGC     >  1:962590/1‑99                          GATGCTCTACCAACTGAGCTAACGGCTCATGATGGAGGATACAGGGCTCGAACCTGTGACCCTCTGCTTGTAAGGCAGACGCTCTCCCAACTGAGCTAA  <  1:1587335/99‑1                                                |||||||||||||||||||||||||                                                     CACGCGACCCTCTGATTACAAATCAGATGCTCTACCAACTGAGCTAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP002094/2131292‑2131338 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCGAACCGCTGACCCTCTGCTTGTAAGGCAGATGCTCTCCCAGCTGAGCTAA  >  CP002094/2131656‑2131707

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.